Cp4.1LG02g16700 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g16700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPlastid movement impaired protein
LocationCp4.1LG02 : 12592463 .. 12593333 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATGCTATGGGAAGAGGATCAAGAAGAAGCAAGAGAACAGCAAAAGTGATGAAAATCAATGGCGAAACCTTCAAGATAAGAACACCAACCACAGCCTCCCAAGTCACCACCCACCATCCAAATCACCTCCTCTATGACTCCCAATCCATCACCCAACTCGGCCTCCGAGCCAAGCCTTTGGACCCTCATCACCAGCTCAAACCTAAGACCCTCTACTTCCTCCTCCACCTGCCCCCTCTCCCCGGTAGCCATCGCCCCTTGTCGCGTGTGCGCTCCGACCTTTGCTCGTCTGCCTCCGACCGCCTCGAGTGTCTTATGCTCTCTCGTCGATCGCTCTCCGACCTCCAATCCTTTCGGTTGGATCCCGATGGGATGTCGACTGCCTCTCGCCCTACTGGACCCGTGCAGATCAAGCTTCGAGTGCCGAGGGAAGAATTTGAGAGGCTGATGAAGGAAAGTAAGAGCAAGGTAGAGGCAGTGGAGAGGATTGTCGACTTGTGGAAAACGGGTGGCATGTGTAGTGGTCAAGCGCGTGAGGTGCGTTTTCTAGCCGTTCTCGATGATAAAATTCTAATAGCTTTTTGAATTTGCATATACAAACAAATTGGGTTGGGTTTAAGAAATCTTTTAAACTAACTCTAGTTAGGTTGATGACAACAACTCTGAGTTCACAAATTAATCCTCGATTTTTGGGTTTTCTTTTTTTTTAATCATTTAAAAATATTTTACTTAACCACCGTACATGTTAGGTAATCTGGGTTGGTCAACCGGAAAATATTTTGAGATAGTTAGGTTGATGACCCGAACCAACTGTAATATTTCAACTCCAAAATTGAACCCGAAACCTTTATGATAGGTAATCTAG

mRNA sequence

ATGGGAAATGCTATGGGAAGAGGATCAAGAAGAAGCAAGAGAACAGCAAAAGTGATGAAAATCAATGGCGAAACCTTCAAGATAAGAACACCAACCACAGCCTCCCAAGTCACCACCCACCATCCAAATCACCTCCTCTATGACTCCCAATCCATCACCCAACTCGGCCTCCGAGCCAAGCCTTTGGACCCTCATCACCAGCTCAAACCTAAGACCCTCTACTTCCTCCTCCACCTGCCCCCTCTCCCCGGTAGCCATCGCCCCTTGTCGCGTGTGCGCTCCGACCTTTGCTCGTCTGCCTCCGACCGCCTCGAGTGTCTTATGCTCTCTCGTCGATCGCTCTCCGACCTCCAATCCTTTCGGTTGGATCCCGATGGGATGTCGACTGCCTCTCGCCCTACTGGACCCGTGCAGATCAAGCTTCGAGTGCCGAGGGAAGAATTTGAGAGGCTGATGAAGGAAAGTAAGAGCAAGGTAGAGGCAGTGGAGAGGATTGTCGACTTGTGGAAAACGGGTGGCATGTGTAGTGGTCAAGCGCGTGAGGTAATCTAG

Coding sequence (CDS)

ATGGGAAATGCTATGGGAAGAGGATCAAGAAGAAGCAAGAGAACAGCAAAAGTGATGAAAATCAATGGCGAAACCTTCAAGATAAGAACACCAACCACAGCCTCCCAAGTCACCACCCACCATCCAAATCACCTCCTCTATGACTCCCAATCCATCACCCAACTCGGCCTCCGAGCCAAGCCTTTGGACCCTCATCACCAGCTCAAACCTAAGACCCTCTACTTCCTCCTCCACCTGCCCCCTCTCCCCGGTAGCCATCGCCCCTTGTCGCGTGTGCGCTCCGACCTTTGCTCGTCTGCCTCCGACCGCCTCGAGTGTCTTATGCTCTCTCGTCGATCGCTCTCCGACCTCCAATCCTTTCGGTTGGATCCCGATGGGATGTCGACTGCCTCTCGCCCTACTGGACCCGTGCAGATCAAGCTTCGAGTGCCGAGGGAAGAATTTGAGAGGCTGATGAAGGAAAGTAAGAGCAAGGTAGAGGCAGTGGAGAGGATTGTCGACTTGTGGAAAACGGGTGGCATGTGTAGTGGTCAAGCGCGTGAGGTAATCTAG

Protein sequence

MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSFRLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLWKTGGMCSGQAREVI
Homology
[Close]
BLAST of Cp4.1LG02g16700 vs. Swiss-Prot
Match: Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 72/175 (41.14%), Postives = 108/175 (61.71%), Query Frame = 1 

Query: 5   MGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAKPLDP 64
           MG      ++ AKVMKI+GETF+I+TP TA +VT  +P ++L DSQ++   G+R+KPL+P
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 65  HHQLKPKTLYFLLHLPPLP--------GSHRPLSRVRSDLCSSASDRLECLMLSRRSLSD 124
           +  LKPK  YFL+ LP LP         +  P  RV S +   A +RL+ LMLSRR++SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 125 LQSFRLD-PDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAV-ERIVDLW 170
           +   R D  DG      P G   ++LR+PR +  +LM+E+ +   A+ E+I+ ++
Sbjct: 121 VTIGRSDGGDGFGPELGP-GHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIY 174

[Close]
BLAST of Cp4.1LG02g16700 vs. TrEMBL
Match: A0A0A0L7W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G368690 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.6e-53
Identity = 120/197 (60.91%), Postives = 138/197 (70.05%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGNA+GRGSRR KRT KVMKINGET KI  PTTA +VT+H+P+HLLY+S+S+   GLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCS-SASDRLECLMLSRRSLSDLQS 120
           PLDPH  L+PKTLYFLL LP LP  H  L R  SDL + SASDRLECL+LSRRSLSDLQ+
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 FRLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVD------------ 180
            R DP   ST      PVQ+K ++PR EFERLMKE K+KVE  +RIVD            
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

[Close]
BLAST of Cp4.1LG02g16700 vs. TrEMBL
Match: A0A059BSU6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-36
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G G  R    AKVMKI GET K+RTP  A QV   HP H+L DS+S+   G+RA+
Sbjct: 1   MGNSVGSGRNRR---AKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRAR 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSH-RPLSRVRSDLCSSASDRLECLMLSRRSLSDLQS 120
           PL+PHH+LKPK +YFL+ LP  P  H +   RVRS L   A DRLECLMLSRR+ SD+  
Sbjct: 61  PLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGLQMGAKDRLECLMLSRRAASDM-- 120

Query: 121 FRLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLW 170
             + P   S       PVQ+K+R+PR + ++LM+ES    E   RIVDL+
Sbjct: 121 --VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVDLY 163

[Close]
BLAST of Cp4.1LG02g16700 vs. TrEMBL
Match: A0A059BT95_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-36
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G G  R    AKVMKI GET K+RTP  A QV   HP H+L DS+S+   G+RA+
Sbjct: 1   MGNSVGSGRNRR---AKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRAR 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSH-RPLSRVRSDLCSSASDRLECLMLSRRSLSDLQS 120
           PL+PHH+LKPK +YFL+ LP  P  H +   RVRS L   A DRLECLMLSRR+ SD+  
Sbjct: 61  PLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGLQMGAKDRLECLMLSRRAASDM-- 120

Query: 121 FRLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLW 170
             + P   S       PVQ+K+R+PR + ++LM+ES    E   RIVDL+
Sbjct: 121 --VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVDLY 163

[Close]
BLAST of Cp4.1LG02g16700 vs. TrEMBL
Match: V4UVZ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012690mg PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-34
Identity = 86/177 (48.59%), Postives = 120/177 (67.80%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN +G      +R AKVMKI+GET K++TP  AS+V   +P ++L DS+++   G+RAK
Sbjct: 1   MGNTIG-----GRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120
           PL+P  QLKPK +YFL+ LP LP   +   RVRS +  SA DRLECLMLSRR++SDL + 
Sbjct: 61  PLEPRQQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAV 120

Query: 121 RL-DPDGMSTASRP-TGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLW--KTGG 174
            +    G   A  P TG +++K+R+PR + E+LM+ES +  E  E+IVDL+  K+GG
Sbjct: 121 NVRSSHGSEVAPGPGTGQMRVKMRLPRAQVEKLMEESANDEEVAEKIVDLYVEKSGG 172

[Close]
BLAST of Cp4.1LG02g16700 vs. TrEMBL
Match: A0A067JIK5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02495 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-34
Identity = 83/173 (47.98%), Postives = 117/173 (67.63%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++GRG +     AK+MK++GETFK++TP  A  V   +P H+L DS ++   G+RAK
Sbjct: 1   MGNSIGRGKK-----AKIMKVDGETFKLKTPAKAMDVVKDYPGHVLLDSDAVKHFGIRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLS---RVRSDLCSSASDRLECLMLSRRSLSDL 120
           PL+P  +L PK +YFL+ LP LP    P+S   RVRS +  SA DRLE LMLSRRS+SDL
Sbjct: 61  PLEPEMELNPKKIYFLVELPKLPEEKEPISITRRVRSGIHLSAKDRLEFLMLSRRSVSDL 120

Query: 121 QSFRLDPDGM-STASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLW 170
              R  P  +       +GPV++K+R+P+ + E+L++ESK +VE  E+IVDL+
Sbjct: 121 SIVRPLPSQIPDDGHNGSGPVRVKMRLPKAQMEKLVEESKDEVEVAEKIVDLF 168

[Close]
BLAST of Cp4.1LG02g16700 vs. TAIR10
Match: AT2G01340.1 (AT2G01340.1 Encodes a protein whose expression is responsive to nematode infection.)

HSP 1 Score: 125.9 bits (315), Expect = 2.5e-29
Identity = 74/169 (43.79%), Postives = 105/169 (62.13%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G      K+T KVMKI+GETFK++TP TA +V    P H+L DS+S+   G RAK
Sbjct: 1   MGNSLG-----GKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120
           PL+   +L+ K LYF++     P    P  RVRS +  SA +RLE LML+RRS SDL S 
Sbjct: 61  PLEAKQRLEAKRLYFVVE----PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDL-SI 120

Query: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLW 170
              P G +T        ++K+R+P+ E E+L+KE  ++ EA ++I  L+
Sbjct: 121 LKPPGGWTTEEEEGAVRRVKVRIPKAELEKLVKEGATEAEATQKIAALF 159

[Close]
BLAST of Cp4.1LG02g16700 vs. TAIR10
Match: AT1G66480.1 (AT1G66480.1 plastid movement impaired 2)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-28
Identity = 72/175 (41.14%), Postives = 108/175 (61.71%), Query Frame = 1 

Query: 5   MGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAKPLDP 64
           MG      ++ AKVMKI+GETF+I+TP TA +VT  +P ++L DSQ++   G+R+KPL+P
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 65  HHQLKPKTLYFLLHLPPLP--------GSHRPLSRVRSDLCSSASDRLECLMLSRRSLSD 124
           +  LKPK  YFL+ LP LP         +  P  RV S +   A +RL+ LMLSRR++SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 125 LQSFRLD-PDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAV-ERIVDLW 170
           +   R D  DG      P G   ++LR+PR +  +LM+E+ +   A+ E+I+ ++
Sbjct: 121 VTIGRSDGGDGFGPELGP-GHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIY 174

[Close]
BLAST of Cp4.1LG02g16700 vs. TAIR10
Match: AT5G37840.1 (AT5G37840.1 BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1))

HSP 1 Score: 114.8 bits (286), Expect = 5.7e-26
Identity = 70/173 (40.46%), Postives = 109/173 (63.01%), Query Frame = 1 

Query: 10  RRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLK 69
           RR+K   KVMKI+G+ F+++TP TAS  T  +P  +L DS+++ +LG+RAKPL+P+  LK
Sbjct: 8   RRNK--VKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEPNQILK 67

Query: 70  PKTLYFLLHLPPLPGSHR-PLSRVRS-DLCSSASDRLECLMLSRRSLSDLQSFRLDPDGM 129
           P   YFL+ LPP+   ++ P  RV S ++   A +RLE LMLSRR++SD+ + R D  G 
Sbjct: 68  PNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVGAARSDVVG- 127

Query: 130 STASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLW--KTGGMCSGQ 179
                  G  +++LR+PR +  +LM+ES    E   +I+  +   +GG+  G+
Sbjct: 128 --DGPELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGGIQGGR 175

[Close]
BLAST of Cp4.1LG02g16700 vs. TAIR10
Match: AT1G71015.1 (AT1G71015.1 unknown protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.2e-25
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G     +K+TA +M INGE+FK++TP  A  V    P H+L +S+++ +LG+RAK
Sbjct: 1   MGNSLG-----TKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120
           PL+PH  L+ K +YF++ LP       P  RVRS +  SA +RLE L LSRRS SDL   
Sbjct: 61  PLEPHQNLESKRIYFMVELPRTWKERTP-RRVRSGIQMSAKERLENLKLSRRSSSDLSVM 120

Query: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDL 169
           +   + ++   R      +KL++P+ + E+L KES+S  +   +I  L
Sbjct: 121 KKKTE-VNDEEREVS--SVKLKLPKWKIEKLRKESESGSDFSNKITQL 159

[Close]
BLAST of Cp4.1LG02g16700 vs. NCBI nr
Match: gi|700202755|gb|KGN57888.1| (hypothetical protein Csa_3G368690 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 5.2e-53
Identity = 120/197 (60.91%), Postives = 138/197 (70.05%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGNA+GRGSRR KRT KVMKINGET KI  PTTA +VT+H+P+HLLY+S+S+   GLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCS-SASDRLECLMLSRRSLSDLQS 120
           PLDPH  L+PKTLYFLL LP LP  H  L R  SDL + SASDRLECL+LSRRSLSDLQ+
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 FRLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVD------------ 180
            R DP   ST      PVQ+K ++PR EFERLMKE K+KVE  +RIVD            
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

[Close]
BLAST of Cp4.1LG02g16700 vs. NCBI nr
Match: gi|449467677|ref|XP_004151549.1| (PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 6.8e-45
Identity = 105/179 (58.66%), Postives = 122/179 (68.16%), Query Frame = 1 

Query: 19  MKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLH 78
           MKINGET KI  PTTA +VT+H+P+HLLY+S+S+   GLRAKPLDPH  L+PKTLYFLL 
Sbjct: 1   MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 60

Query: 79  LPPLPGSHRPLSRVRSDLCS-SASDRLECLMLSRRSLSDLQSFRLDPDGMSTASRPTGPV 138
           LP LP  H  L R  SDL + SASDRLECL+LSRRSLSDLQ+ R DP   ST      PV
Sbjct: 61  LPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 120

Query: 139 QIKLRVPREEFERLMKESKSKVEAVERIVD-----------------LWKTGGMCSGQA 180
           Q+K ++PR EFERLMKE K+KVE  +RIVD                  WK GG  SG+A
Sbjct: 121 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYSGKA 179

[Close]
BLAST of Cp4.1LG02g16700 vs. NCBI nr
Match: gi|659114591|ref|XP_008457131.1| (PREDICTED: uncharacterized protein At1g66480-like [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 3.7e-43
Identity = 96/149 (64.43%), Postives = 112/149 (75.17%), Query Frame = 1 

Query: 19  MKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLH 78
           MKINGETFKI  PTTA +VT+H+PNHLLY+S+S+ Q GLRAKPLDPH QL+PKTLYFLL 
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 79  LPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSFRLDPDGMSTASRPTGPVQ 138
           LP L G  R L R  SDL  SASDRLECL+LSRRS+SDLQ+ R DP            VQ
Sbjct: 61  LPTLYGVDRSLRRTCSDLHLSASDRLECLLLSRRSVSDLQTLRFDPQRSLIHDGAAKSVQ 120

Query: 139 IKLRVPREEFERLMKESKSKVEAVERIVD 168
           +K ++PR EFERLMKE K+ VE  ++IVD
Sbjct: 121 VKFQLPRAEFERLMKECKNNVEVTKKIVD 149

[Close]
BLAST of Cp4.1LG02g16700 vs. NCBI nr
Match: gi|629103864|gb|KCW69333.1| (hypothetical protein EUGRSUZ_F02820 [Eucalyptus grandis])

HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G G  R    AKVMKI GET K+RTP  A QV   HP H+L DS+S+   G+RA+
Sbjct: 1   MGNSVGSGRNRR---AKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRAR 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSH-RPLSRVRSDLCSSASDRLECLMLSRRSLSDLQS 120
           PL+PHH+LKPK +YFL+ LP  P  H +   RVRS L   A DRLECLMLSRR+ SD+  
Sbjct: 61  PLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGLQMGAKDRLECLMLSRRAASDM-- 120

Query: 121 FRLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLW 170
             + P   S       PVQ+K+R+PR + ++LM+ES    E   RIVDL+
Sbjct: 121 --VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVDLY 163

[Close]
BLAST of Cp4.1LG02g16700 vs. NCBI nr
Match: gi|702374332|ref|XP_010062234.1| (PREDICTED: uncharacterized protein At1g66480-like [Eucalyptus grandis])

HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 1 

Query: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G G  R    AKVMKI GET K+RTP  A QV   HP H+L DS+S+   G+RA+
Sbjct: 1   MGNSVGSGRNRR---AKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRAR 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSH-RPLSRVRSDLCSSASDRLECLMLSRRSLSDLQS 120
           PL+PHH+LKPK +YFL+ LP  P  H +   RVRS L   A DRLECLMLSRR+ SD+  
Sbjct: 61  PLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGLQMGAKDRLECLMLSRRAASDM-- 120

Query: 121 FRLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLW 170
             + P   S       PVQ+K+R+PR + ++LM+ES    E   RIVDL+
Sbjct: 121 --VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVDLY 163

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g16700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y1648_ARATH1.1e-2641.14Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1[more]
BLAST of Cp4.1LG02g16700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7W0_CUCSA3.6e-5360.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G368690 PE=4 SV=1[more]
A0A059BSU6_EUCGR3.1e-3650.59Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1[more]
A0A059BT95_EUCGR3.1e-3650.59Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1[more]
V4UVZ8_9ROSI1.7e-3448.59Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012690mg PE=4 SV=1[more]
A0A067JIK5_JATCU2.9e-3447.98Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02495 PE=4 SV=1[more]
BLAST of Cp4.1LG02g16700 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01340.12.5e-2943.79 Encodes a protein whose expression is responsive to nematode infecti... [more]
AT1G66480.16.1e-2841.14 plastid movement impaired 2[more]
AT5G37840.15.7e-2640.46 BEST Arabidopsis thaliana protein match is: plastid movement impaire... [more]
AT1G71015.12.2e-2540.48 unknown protein[more]
BLAST of Cp4.1LG02g16700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202755|gb|KGN57888.1|5.2e-5360.91hypothetical protein Csa_3G368690 [Cucumis sativus][more]
gi|449467677|ref|XP_004151549.1|6.8e-4558.66PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus][more]
gi|659114591|ref|XP_008457131.1|3.7e-4364.43PREDICTED: uncharacterized protein At1g66480-like [Cucumis melo][more]
gi|629103864|gb|KCW69333.1|4.4e-3650.59hypothetical protein EUGRSUZ_F02820 [Eucalyptus grandis][more]
gi|702374332|ref|XP_010062234.1|4.4e-3650.59PREDICTED: uncharacterized protein At1g66480-like [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025322DUF4228_plant
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009624 response to nematode
cellular_component GO:0005575 cellular_component
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g16700.1Cp4.1LG02g16700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..107
score: 8.8
NoneNo IPR availableunknownCoilCoilcoord: 145..165
scor
NoneNo IPR availablePANTHERPTHR33148FAMILY NOT NAMEDcoord: 2..168
score: 1.3
NoneNo IPR availablePANTHERPTHR33148:SF6SUBFAMILY NOT NAMEDcoord: 2..168
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g16700Cucsa.012710Cucumber (Gy14) v1cgycpeB0531
Cp4.1LG02g16700CmaCh01G003550Cucurbita maxima (Rimu)cmacpeB491
Cp4.1LG02g16700CmoCh01G003710Cucurbita moschata (Rifu)cmocpeB449
Cp4.1LG02g16700Cla013167Watermelon (97103) v1cpewmB568
Cp4.1LG02g16700ClCG05G010920Watermelon (Charleston Gray)cpewcgB518
Cp4.1LG02g16700Lsi05G003030Bottle gourd (USVL1VR-Ls)cpelsiB470
Cp4.1LG02g16700CsaV3_3G021660Cucumber (Chinese Long) v3cpecucB0686
Cp4.1LG02g16700Bhi01G001346Wax gourdcpewgoB0681
Cp4.1LG02g16700CsGy3G021050Cucumber (Gy14) v2cgybcpeB380
Cp4.1LG02g16700Carg07442Silver-seed gourdcarcpeB1072
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g16700Melon (DHL92) v3.5.1cpemeB529
Cp4.1LG02g16700Melon (DHL92) v3.6.1cpemedB630
Cp4.1LG02g16700Silver-seed gourdcarcpeB0256
Cp4.1LG02g16700Cucurbita pepo (Zucchini)cpecpeB449
Cp4.1LG02g16700Cucurbita maxima (Rimu)cmacpeB279
Cp4.1LG02g16700Cucurbita moschata (Rifu)cmocpeB241