Carg07442 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07442
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Plastid movement impaired 2
Location	Cucurbita_argyrosperma_scaffold_019 : 860413 .. 861494 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATGCAATGGGAGGAGGATCAAGAAGAAGCAAGAGAACAGCAAAGGTGATGAAAATCAACGGCGAAACCTTCAAGATAAGAACACCAACCACAGCCTTCCAAGTCACCACCCACCATCCAAATCACCTCCTCTATGACTCCCAATCCATCACCCAACTCGGCCTCCGAGCCAAACCTCTGGACCCTCACCACCAGCTCAAACCTAAGACCCTCTACTTCCTCCTCCACCTGCCCCCTCTCCCCGGTAGCCATCGCCCGTTGTCTCGTGTGCGCTCCGACCTTTGCTCGTCAGCCTCCGACCGCCTCGAGTGTCTTATGCTCTCTCGTCGATCAGTCTCCGACCTCCAATCCTTTCGGTTGGATCCCGATGGGATGTCGACTGCCTGTCGCCCTACTGGACCCGTGCAAATCAAGCTTCGAGTGCCGAGGGAAGAATTTGAGAGGCTGATGAAGGAAAGTAAGAGCAAGGTAGAGGCAGCGGAGAGGATTGTCGATTTGTGGAAAACAGGCGGCATGTGTAGTGGTCAAGCGCGTGAGGTGCGTTCTTTAGCCGTTCTTTAGCTTTTTGAATTTACGTTTTAGTGAAGTGATCAAGCGGGTTGGGTTTAAGAATTCTTTTAAACTAACTTTAGTTAGGTTGATGACCGGAACAACTCCAATTGAGTTCACAAATTAATCTTCCATTTTTGGGTTTTTTTTTTTTTTAATCATTTAAAAATATTTTACTTATCCACCGTACATGTTAGGTAATCTTGGTTAGTCGACCTGAAAATATTTTGAGCTAGTTAAGTTGATGACTTGAACCGACTGGAATTTTTCAGCTCAAAAAATTGAATCGAACCCGACCTTTATGATAGGTAATCTGGATTGGTCATATTCTCGAATCATTTAAACATCCCTAAAGATTCATATTCTTTTGGCGTATTCTCTACTCTTCCGAAGAAATTTTTTTTCATTAAAATAATAATAATAATACACTTTATCAAGGAAAAGAAAAATATTTTAAAGTACTTTGAGTTGTAATTTTTTTTTTTTTTTTTTTTTGTATTTTGAAGTACTTTTTATATCTTAATTAA

mRNA sequence

ATGGGAAATGCAATGGGAGGAGGATCAAGAAGAAGCAAGAGAACAGCAAAGGTGATGAAAATCAACGGCGAAACCTTCAAGATAAGAACACCAACCACAGCCTTCCAAGTCACCACCCACCATCCAAATCACCTCCTCTATGACTCCCAATCCATCACCCAACTCGGCCTCCGAGCCAAACCTCTGGACCCTCACCACCAGCTCAAACCTAAGACCCTCTACTTCCTCCTCCACCTGCCCCCTCTCCCCGGTAGCCATCGCCCGTTGTCTCGTGTGCGCTCCGACCTTTGCTCGTCAGCCTCCGACCGCCTCGAGTGTCTTATGCTCTCTCGTCGATCAGTCTCCGACCTCCAATCCTTTCGGTTGGATCCCGATGGGATGTCGACTGCCTGTCGCCCTACTGGACCCGTGCAAATCAAGCTTCGAGTGCCGAGGGAAGAATTTGAGAGGCTGATGAAGGAAAGTAAGAGCAAGGTAGAGGCAGCGGAGAGGATTGTCGATTTGTGGAAAACAGGCGGCATGTGTAGTGGTCAAGCGCGTGAGTACTTTTTATATCTTAATTAA

Coding sequence (CDS)

ATGGGAAATGCAATGGGAGGAGGATCAAGAAGAAGCAAGAGAACAGCAAAGGTGATGAAAATCAACGGCGAAACCTTCAAGATAAGAACACCAACCACAGCCTTCCAAGTCACCACCCACCATCCAAATCACCTCCTCTATGACTCCCAATCCATCACCCAACTCGGCCTCCGAGCCAAACCTCTGGACCCTCACCACCAGCTCAAACCTAAGACCCTCTACTTCCTCCTCCACCTGCCCCCTCTCCCCGGTAGCCATCGCCCGTTGTCTCGTGTGCGCTCCGACCTTTGCTCGTCAGCCTCCGACCGCCTCGAGTGTCTTATGCTCTCTCGTCGATCAGTCTCCGACCTCCAATCCTTTCGGTTGGATCCCGATGGGATGTCGACTGCCTGTCGCCCTACTGGACCCGTGCAAATCAAGCTTCGAGTGCCGAGGGAAGAATTTGAGAGGCTGATGAAGGAAAGTAAGAGCAAGGTAGAGGCAGCGGAGAGGATTGTCGATTTGTGGAAAACAGGCGGCATGTGTAGTGGTCAAGCGCGTGAGTACTTTTTATATCTTAATTAA

Protein sequence

MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAREYFLYLN

Homology

[Close]

BLAST of Carg07442 vs. NCBI nr
Match: XP_022948507.1 (uncharacterized protein At1g66480-like [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 4.0e-97
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120
           PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120

Query: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAR 180
           RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAR
Sbjct: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAR 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg07442 vs. NCBI nr
Match: XP_022998216.1 (uncharacterized protein At1g66480-like [Cucurbita maxima])

HSP 1 Score: 353.6 bits (906), Expect = 4.1e-94
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGNAMG GSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSI QLGLRAK
Sbjct: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSINQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120
           PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRS+SDLQSF
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120

Query: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAR 180
           RLDPDGMSTA RPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAR
Sbjct: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAR 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg07442 vs. NCBI nr
Match: XP_023524596.1 (uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.9 bits (899), Expect = 2.7e-93
Identity = 176/181 (97.24%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGNAMG GSRRSKRTAKVMKINGETFKIRTPTTA QVTTHHPNHLLYDSQSITQLGLRAK
Sbjct: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTASQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120
           PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRS+SDLQSF
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQSF 120

Query: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLWKTGGMCSGQAR 180
           RLDPDGMSTA RPTGPVQIKLRVPREEFERLMKESKSKVEA ERIVDLWKTGGMCSGQAR
Sbjct: 121 RLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAVERIVDLWKTGGMCSGQAR 180

Query: 181 E 182
           E
Sbjct: 181 E 181

[Close]

BLAST of Carg07442 vs. NCBI nr
Match: KGN57888.1 (hypothetical protein Csa_3G368690 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 118/197 (59.90%), Postives = 138/197 (70.05%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGNA+G GSRR KRT KVMKINGET KI  PTTA++VT+H+P+HLLY+S+S+   GLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCS-SASDRLECLMLSRRSVSDLQS 120
           PLDPH  L+PKTLYFLL LP LP  H  L R  SDL + SASDRLECL+LSRRS+SDLQ+
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 FRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------ 180
            R DP   ST      PVQ+K ++PR EFERLMKE K+KVE  +RIVD            
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

[Close]

BLAST of Carg07442 vs. NCBI nr
Match: XP_004151549.1 (PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 6.0e-45
Identity = 104/179 (58.10%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 19  MKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLH 78
           MKINGET KI  PTTA++VT+H+P+HLLY+S+S+   GLRAKPLDPH  L+PKTLYFLL 
Sbjct: 1   MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 60

Query: 79  LPPLPGSHRPLSRVRSDLCS-SASDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPV 138
           LP LP  H  L R  SDL + SASDRLECL+LSRRS+SDLQ+ R DP   ST      PV
Sbjct: 61  LPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 120

Query: 139 QIKLRVPREEFERLMKESKSKVEAAERIVD-----------------LWKTGGMCSGQA 180
           Q+K ++PR EFERLMKE K+KVE  +RIVD                  WK GG  SG+A
Sbjct: 121 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYSGKA 179

[Close]

BLAST of Carg07442 vs. TAIR10
Match: AT1G66480.1 (plastid movement impaired 2)

HSP 1 Score: 124.4 bits (311), Expect = 7.4e-29
Identity = 74/175 (42.29%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 5   MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDP 64
           MG      ++ AKVMKI+GETF+I+TP TA +VT  +P ++L DSQ++   G+R+KPL+P
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 65  HHQLKPKTLYFLLHLPPLP--------GSHRPLSRVRSDLCSSASDRLECLMLSRRSVSD 124
           +  LKPK  YFL+ LP LP         +  P  RV S +   A +RL+ LMLSRR+VSD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 125 LQSFRLD-PDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEA-AERIVDLW 170
           +   R D  DG      P G   ++LR+PR +  +LM+E+ +   A AE+I+ ++
Sbjct: 121 VTIGRSDGGDGFGPELGP-GHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIY 174

[Close]

BLAST of Carg07442 vs. TAIR10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection.)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-28
Identity = 75/170 (44.12%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++GG     K+T KVMKI+GETFK++TP TA +V    P H+L DS+S+   G RAK
Sbjct: 1   MGNSLGG-----KKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120
           PL+   +L+ K LYF++     P    P  RVRS +  SA +RLE LML+RRS SDL   
Sbjct: 61  PLEAKQRLEAKRLYFVVE----PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSI- 120

Query: 121 RLDPDGMSTACRPTGPV-QIKLRVPREEFERLMKESKSKVEAAERIVDLW 170
            L P          G V ++K+R+P+ E E+L+KE  ++ EA ++I  L+
Sbjct: 121 -LKPXXXXXXXXXEGAVRRVKVRIPKAELEKLVKEGATEAEATQKIAALF 159

[Close]

BLAST of Carg07442 vs. TAIR10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1))

HSP 1 Score: 115.9 bits (289), Expect = 2.6e-26
Identity = 70/178 (39.33%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 5   MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDP 64
           MG      +   KVMKI+G+ F+++TP TA   T  +P  +L DS+++ +LG+RAKPL+P
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 65  HHQLKPKTLYFLLHLPPLPGSHR-PLSRVRS-DLCSSASDRLECLMLSRRSVSDLQSFRL 124
           +  LKP   YFL+ LPP+   ++ P  RV S ++   A +RLE LMLSRR+VSD+ + R 
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVGAARS 120

Query: 125 DPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW--KTGGMCSGQ 179
           D  G        G  +++LR+PR +  +LM+ES    E A +I+  +   +GG+  G+
Sbjct: 121 DVVGDGP---ELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGGIQGGR 175

[Close]

BLAST of Carg07442 vs. TAIR10
Match: AT1G71015.1 (unknown protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.2e-25
Identity = 68/168 (40.48%), Postives = 104/168 (61.90%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G     +K+TA +M INGE+FK++TP  A  V    P H+L +S+++ +LG+RAK
Sbjct: 1   MGNSLG-----TKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120
           PL+PH  L+ K +YF++ LP       P  RVRS +  SA +RLE L LSRRS SDL   
Sbjct: 61  PLEPHQNLESKRIYFMVELPRTWKERTP-RRVRSGIQMSAKERLENLKLSRRSSSDLSVM 120

Query: 121 RLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDL 169
           +   + ++   R      +KL++P+ + E+L KES+S  + + +I  L
Sbjct: 121 KKKTE-VNDEEREVS--SVKLKLPKWKIEKLRKESESGSDFSNKITQL 159

[Close]

BLAST of Carg07442 vs. Swiss-Prot
Match: sp|Q6NLC8|Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 74/175 (42.29%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 5   MGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDP 64
           MG      ++ AKVMKI+GETF+I+TP TA +VT  +P ++L DSQ++   G+R+KPL+P
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 65  HHQLKPKTLYFLLHLPPLP--------GSHRPLSRVRSDLCSSASDRLECLMLSRRSVSD 124
           +  LKPK  YFL+ LP LP         +  P  RV S +   A +RL+ LMLSRR+VSD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 125 LQSFRLD-PDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEA-AERIVDLW 170
           +   R D  DG      P G   ++LR+PR +  +LM+E+ +   A AE+I+ ++
Sbjct: 121 VTIGRSDGGDGFGPELGP-GHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIY 174

[Close]

BLAST of Carg07442 vs. TrEMBL
Match: tr|A0A0A0L7W0|A0A0A0L7W0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-52
Identity = 118/197 (59.90%), Postives = 138/197 (70.05%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGNA+G GSRR KRT KVMKINGET KI  PTTA++VT+H+P+HLLY+S+S+   GLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCS-SASDRLECLMLSRRSVSDLQS 120
           PLDPH  L+PKTLYFLL LP LP  H  L R  SDL + SASDRLECL+LSRRS+SDLQ+
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 FRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------ 180
            R DP   ST      PVQ+K ++PR EFERLMKE K+KVE  +RIVD            
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

[Close]

BLAST of Carg07442 vs. TrEMBL
Match: tr|A0A1S3C4W5|A0A1S3C4W5_CUCME (uncharacterized protein At1g66480 OS=Cucumis melo OX=3656 GN=LOC103496878 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 97/149 (65.10%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 19  MKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLH 78
           MKINGETFKI  PTTA++VT+H+PNHLLY+S+S+ Q GLRAKPLDPH QL+PKTLYFLL 
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 79  LPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPVQ 138
           LP L G  R L R  SDL  SASDRLECL+LSRRSVSDLQ+ R DP            VQ
Sbjct: 61  LPTLYGVDRSLRRTCSDLHLSASDRLECLLLSRRSVSDLQTLRFDPQRSLIHDGAAKSVQ 120

Query: 139 IKLRVPREEFERLMKESKSKVEAAERIVD 168
           +K ++PR EFERLMKE K+ VE  ++IVD
Sbjct: 121 VKFQLPRAEFERLMKECKNNVEVTKKIVD 149

[Close]

BLAST of Carg07442 vs. TrEMBL
Match: tr|A0A2R6PA16|A0A2R6PA16_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30881 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.6e-40
Identity = 93/178 (52.25%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN +GG      + AKVMKINGETFKIRTP  A+++   +P H+L +S+S+ + G+RAK
Sbjct: 1   MGNTIGG-----TKKAKVMKINGETFKIRTPVRAWEIVKDYPGHVLLESESVKKFGIRAK 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQSF 120
           P+DP H+LKPK +YFL+ LP LP    P  R RSD+C SA DRLECLMLSRRSVSDL   
Sbjct: 61  PIDPQHELKPKKVYFLVELPNLPEKKVP-RRARSDMCVSAKDRLECLMLSRRSVSDLSIV 120

Query: 121 R---LDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW--KTGG 174
           R   LDP G+  +    GPV++K+R+PR +  ++++ SK + E AE+I+DL+  K GG
Sbjct: 121 RPTGLDPGGLGPS---PGPVRVKMRLPRAQLAKVVEGSKDEAEVAEKIIDLFVDKVGG 169

[Close]

BLAST of Carg07442 vs. TrEMBL
Match: tr|A0A059BSU6|A0A059BSU6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02820 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 87/170 (51.18%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G G     R AKVMKI GET K+RTP  A QV   HP H+L DS+S+   G+RA+
Sbjct: 1   MGNSVGSG---RNRRAKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRAR 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSH-RPLSRVRSDLCSSASDRLECLMLSRRSVSDLQS 120
           PL+PHH+LKPK +YFL+ LP  P  H +   RVRS L   A DRLECLMLSRR+ SD+  
Sbjct: 61  PLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGLQMGAKDRLECLMLSRRAASDM-- 120

Query: 121 FRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW 170
             + P   S       PVQ+K+R+PR + ++LM+ES    E A RIVDL+
Sbjct: 121 --VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVDLY 163

[Close]

BLAST of Carg07442 vs. TrEMBL
Match: tr|A0A059BT95|A0A059BT95_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02820 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 87/170 (51.18%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60
           MGN++G G     R AKVMKI GET K+RTP  A QV   HP H+L DS+S+   G+RA+
Sbjct: 1   MGNSVGSG---RNRRAKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRAR 60

Query: 61  PLDPHHQLKPKTLYFLLHLPPLPGSH-RPLSRVRSDLCSSASDRLECLMLSRRSVSDLQS 120
           PL+PHH+LKPK +YFL+ LP  P  H +   RVRS L   A DRLECLMLSRR+ SD+  
Sbjct: 61  PLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGLQMGAKDRLECLMLSRRAASDM-- 120

Query: 121 FRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVDLW 170
             + P   S       PVQ+K+R+PR + ++LM+ES    E A RIVDL+
Sbjct: 121 --VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVDLY 163

The following BLAST results are available for this feature:

BLAST of Carg07442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948507.1	4.0e-97	100.00	uncharacterized protein At1g66480-like [Cucurbita moschata]	[more]
XP_022998216.1	4.1e-94	97.79	uncharacterized protein At1g66480-like [Cucurbita maxima]	[more]
XP_023524596.1	2.7e-93	97.24	uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo]	[more]
KGN57888.1	2.3e-52	59.90	hypothetical protein Csa_3G368690 [Cucumis sativus]	[more]
XP_004151549.1	6.0e-45	58.10	PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus]	[more]

BLAST of Carg07442 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66480.1	7.4e-29	42.29	plastid movement impaired 2	[more]
AT2G01340.1	1.6e-28	44.12	Encodes a protein whose expression is responsive to nematode infection.	[more]
AT5G37840.1	2.6e-26	39.33	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]
AT1G71015.1	2.2e-25	40.48	unknown protein	[more]

BLAST of Carg07442 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NLC8\|Y1648_ARATH	1.3e-27	42.29	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P...	[more]

BLAST of Carg07442 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7W0\|A0A0A0L7W0_CUCSA	1.5e-52	59.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1	[more]
tr\|A0A1S3C4W5\|A0A1S3C4W5_CUCME	3.4e-44	65.10	uncharacterized protein At1g66480 OS=Cucumis melo OX=3656 GN=LOC103496878 PE=4 S...	[more]
tr\|A0A2R6PA16\|A0A2R6PA16_ACTCH	8.6e-40	52.25	Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]
tr\|A0A059BSU6\|A0A059BSU6_EUCGR	1.2e-36	51.18	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02820 PE=4 SV...	[more]
tr\|A0A059BT95\|A0A059BT95_EUCGR	1.2e-36	51.18	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02820 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07442-RA	Carg07442-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 1..170
None	No IPR available	PANTHER	PTHR33148:SF6	SUBFAMILY NOT NAMED	coord: 1..170
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..118 e-value: 1.5E-18 score: 67.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07442	Cla013167	Watermelon (97103) v1	carwmB0760
Carg07442	ClCG05G010920	Watermelon (Charleston Gray)	carwcgB0739
Carg07442	Cucsa.012710	Cucumber (Gy14) v1	carcgyB0859
Carg07442	CmaCh01G003550	Cucurbita maxima (Rimu)	carcmaB1059
Carg07442	CmoCh01G003710	Cucurbita moschata (Rifu)	carcmoB1033
Carg07442	Lsi05G003030	Bottle gourd (USVL1VR-Ls)	carlsiB700
Carg07442	Cp4.1LG02g16700	Cucurbita pepo (Zucchini)	carcpeB1072
Carg07442	CsGy3G021050	Cucumber (Gy14) v2	carcgybB0757
Carg07442	CsaV3_3G021660	Cucumber (Chinese Long) v3	carcucB0801
Carg07442	Cla97C05G093220	Watermelon (97103) v2	carwmbB0795
Carg07442	Bhi01G001346	Wax gourd	carwgoB0895

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07442	Silver-seed gourd	carcarB213
Carg07442	Cucurbita maxima (Rimu)	carcmaB1057
Carg07442	Cucurbita moschata (Rifu)	carcmoB1031
Carg07442	Cucurbita pepo (Zucchini)	carcpeB1073
Carg07442	Melon (DHL92) v3.5.1	carmeB0756
Carg07442	Melon (DHL92) v3.6.1	carmedB0771