Cucsa.012710 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.012710
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Plastid movement impaired protein
Location	scaffold00164 : 422893 .. 423489 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATGCAATAGGGAGAGGATCAAGAAGAAAAAAGAGAACAACAAAAGTCATGAAAATCAATGGAGAAACCATCAAAATAACACTTCCAACCACAGCATACGAAGTCACAAGCCATTATCCAAGTCACCTTCTTTATGAATCCAAATCCCTAAAACTGTTTGGCCTCCGAGCAAAGCCTTTGGACCCTCACTGTCACCTCGAACCTAAAACCCTTTACTTCCTCCTCCAATTGCCAGCACTCCCTCGCGACCATTGTTCGCTTCGTCGCACTTGTTCCGACCTTCATAATTTGTCTGCATCTGACCGCCTTGAGTGCCTTTTGCTCTCTCGTCGTTCGCTTTCCGACCTCCAAACTCTTCGATTCGATCCTCAGAGGTCATCAACCGACGATGGTGCTGCTAAGCCTGTGCAGGTCAAATTTCAATTGCCGAGGGCAGAATTCGAGAGATTGATGAAGGAGTGTAAGAACAAGGTGGAGGTCACAAAGAGGATTGTTGATTATTGTGCAAGAAGTAGAGATAATGTCTATGGCAACCAAGATGATGAGTTATTTTGGAAGATGGGTGGAGCATATAGCGGTAAAGCGTGCTAG

mRNA sequence

ATGGGAAATGCAATAGGGAGAGGATCAAGAAGAAAAAAGAGAACAACAAAAGTCATGAAAATCAATGGAGAAACCATCAAAATAACACTTCCAACCACAGCATACGAAGTCACAAGCCATTATCCAAGTCACCTTCTTTATGAATCCAAATCCCTAAAACTGTTTGGCCTCCGAGCAAAGCCTTTGGACCCTCACTGTCACCTCGAACCTAAAACCCTTTACTTCCTCCTCCAATTGCCAGCACTCCCTCGCGACCATTGTTCGCTTCGTCGCACTTGTTCCGACCTTCATAATTTGTCTGCATCTGACCGCCTTGAGTGCCTTTTGCTCTCTCGTCGTTCGCTTTCCGACCTCCAAACTCTTCGATTCGATCCTCAGAGGTCATCAACCGACGATGGTGCTGCTAAGCCTGTGCAGGTCAAATTTCAATTGCCGAGGGCAGAATTCGAGAGATTGATGAAGGAGTGTAAGAACAAGGTGGAGGTCACAAAGAGGATTGTTGATTATTGTGCAAGAAGTAGAGATAATGTCTATGGCAACCAAGATGATGAGTTATTTTGGAAGATGGGTGGAGCATATAGCGGTAAAGCGTGCTAG

Coding sequence (CDS)

ATGGGAAATGCAATAGGGAGAGGATCAAGAAGAAAAAAGAGAACAACAAAAGTCATGAAAATCAATGGAGAAACCATCAAAATAACACTTCCAACCACAGCATACGAAGTCACAAGCCATTATCCAAGTCACCTTCTTTATGAATCCAAATCCCTAAAACTGTTTGGCCTCCGAGCAAAGCCTTTGGACCCTCACTGTCACCTCGAACCTAAAACCCTTTACTTCCTCCTCCAATTGCCAGCACTCCCTCGCGACCATTGTTCGCTTCGTCGCACTTGTTCCGACCTTCATAATTTGTCTGCATCTGACCGCCTTGAGTGCCTTTTGCTCTCTCGTCGTTCGCTTTCCGACCTCCAAACTCTTCGATTCGATCCTCAGAGGTCATCAACCGACGATGGTGCTGCTAAGCCTGTGCAGGTCAAATTTCAATTGCCGAGGGCAGAATTCGAGAGATTGATGAAGGAGTGTAAGAACAAGGTGGAGGTCACAAAGAGGATTGTTGATTATTGTGCAAGAAGTAGAGATAATGTCTATGGCAACCAAGATGATGAGTTATTTTGGAAGATGGGTGGAGCATATAGCGGTAAAGCGTGCTAG

Protein sequence

MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQLPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYSGKAC*

Homology

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BLAST of Cucsa.012710 vs. Swiss-Prot
Match: Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-24
Identity = 66/166 (39.76%), Postives = 103/166 (62.05%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN+I      K++  KVMKI+GET +I  P TA EVT+ YP ++L +S+++K FG+R+K
Sbjct: 1   MGNSI----TVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSL--------RRTCSDLHNLSASDRLECLLLSR 120
           PL+P+  L+PK  YFL++LP LP +  ++        RR  S +H + A +RL+ L+LSR
Sbjct: 61  PLEPNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIH-VGAKERLDMLMLSR 120

Query: 121 RSLSDLQTLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKN 159
           R++SD+   R D       +       V+ +LPR++  +LM+E  N
Sbjct: 121 RTVSDVTIGRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNN 161

[Close]

BLAST of Cucsa.012710 vs. TrEMBL
Match: A0A0A0L7W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G368690 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 4.6e-110
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120
           PLDPHCHLEPKTLYFLLQLP LPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180
           LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

Query: 181 QDDELFWKMGGAYSGKAC 199
           QDDELFWKMGGAYSGKAC
Sbjct: 181 QDDELFWKMGGAYSGKAC 198

[Close]

BLAST of Cucsa.012710 vs. TrEMBL
Match: A0A061E984_THECC (Encodes a protein whose expression is responsive to nematode infection, putative OS=Theobroma cacao GN=TCM_047008 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.3e-35
Identity = 87/179 (48.60%), Postives = 117/179 (65.36%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN++G      K+TTKVMKINGET K+  P  A EV   YP H+L ES+S+K FG+RAK
Sbjct: 1   MGNSLGG-----KKTTKVMKINGETFKLKTPVKAEEVVKDYPGHVLLESESVKHFGIRAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120
           PL  H  LEPK LYFL++LP  P++  + RR  S + N+SA DRLE L+LSRRS+SDL  
Sbjct: 61  PLQSHQSLEPKRLYFLVELPEAPKEIVT-RRVRSGI-NMSAKDRLESLMLSRRSVSDLTL 120

Query: 121 LR---FDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDN 177
           ++     P+ S  +   +  ++VK +LPRAE ERLMKE  N+ E  ++I+  C  +  N
Sbjct: 121 MKPKCVIPEESEEEGSESGAMRVKMRLPRAEVERLMKESNNEAEAAEKIMQLCVANTRN 172

[Close]

BLAST of Cucsa.012710 vs. TrEMBL
Match: A0A067JIK5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02495 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.5e-33
Identity = 83/173 (47.98%), Postives = 118/173 (68.21%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN+IGRG +      K+MK++GET K+  P  A +V   YP H+L +S ++K FG+RAK
Sbjct: 1   MGNSIGRGKK-----AKIMKVDGETFKLKTPAKAMDVVKDYPGHVLLDSDAVKHFGIRAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSL---RRTCSDLHNLSASDRLECLLLSRRSLSD 120
           PL+P   L PK +YFL++LP LP +   +   RR  S +H LSA DRLE L+LSRRS+SD
Sbjct: 61  PLEPEMELNPKKIYFLVELPKLPEEKEPISITRRVRSGIH-LSAKDRLEFLMLSRRSVSD 120

Query: 121 LQTLRFDPQRSSTDDG--AAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVD 169
           L  +R  P +   DDG   + PV+VK +LP+A+ E+L++E K++VEV ++IVD
Sbjct: 121 LSIVRPLPSQ-IPDDGHNGSGPVRVKMRLPKAQMEKLVEESKDEVEVAEKIVD 166

[Close]

BLAST of Cucsa.012710 vs. TrEMBL
Match: A0A059BSU6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-32
Identity = 78/169 (46.15%), Postives = 112/169 (66.27%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN++G G  R+    KVMKI GET+K+  P  A +V   +P H+L +S+S+K FG+RA+
Sbjct: 1   MGNSVGSGRNRR---AKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRAR 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDH-CSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQ 120
           PL+PH  L+PK +YFL++LP  P  H  + RR  S L  + A DRLECL+LSRR+ SD+ 
Sbjct: 61  PLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGL-QMGAKDRLECLMLSRRAASDM- 120

Query: 121 TLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVD 169
                P  +S    +A PVQ+K ++PRA+ ++LM+E  +  EV +RIVD
Sbjct: 121 ---VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVD 161

[Close]

BLAST of Cucsa.012710 vs. TrEMBL
Match: A0A059BT95_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-32
Identity = 78/169 (46.15%), Postives = 112/169 (66.27%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN++G G  R+    KVMKI GET+K+  P  A +V   +P H+L +S+S+K FG+RA+
Sbjct: 1   MGNSVGSGRNRR---AKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRAR 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDH-CSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQ 120
           PL+PH  L+PK +YFL++LP  P  H  + RR  S L  + A DRLECL+LSRR+ SD+ 
Sbjct: 61  PLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGL-QMGAKDRLECLMLSRRAASDM- 120

Query: 121 TLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVD 169
                P  +S    +A PVQ+K ++PRA+ ++LM+E  +  EV +RIVD
Sbjct: 121 ---VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVD 161

[Close]

BLAST of Cucsa.012710 vs. TAIR10
Match: AT2G01340.1 (AT2G01340.1 Encodes a protein whose expression is responsive to nematode infection.)

HSP 1 Score: 124.4 bits (311), Expect = 7.8e-29
Identity = 73/166 (43.98%), Postives = 106/166 (63.86%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN++G      K+TTKVMKI+GET K+  P TA EV   +P H+L +S+S+K +G RAK
Sbjct: 1   MGNSLGG-----KKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120
           PL+    LE K LYF+++    P   C  RR  S +H +SA +RLE L+L+RRS SDL  
Sbjct: 61  PLEAKQRLEAKRLYFVVE----PVKECPPRRVRSGIH-VSAKERLESLMLARRSSSDLSI 120

Query: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRI 167
           L+  P   +T++      +VK ++P+AE E+L+KE   + E T++I
Sbjct: 121 LK-PPGGWTTEEEEGAVRRVKVRIPKAELEKLVKEGATEAEATQKI 155

[Close]

BLAST of Cucsa.012710 vs. TAIR10
Match: AT1G66480.1 (AT1G66480.1 plastid movement impaired 2)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 66/166 (39.76%), Postives = 103/166 (62.05%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN+I      K++  KVMKI+GET +I  P TA EVT+ YP ++L +S+++K FG+R+K
Sbjct: 1   MGNSI----TVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSL--------RRTCSDLHNLSASDRLECLLLSR 120
           PL+P+  L+PK  YFL++LP LP +  ++        RR  S +H + A +RL+ L+LSR
Sbjct: 61  PLEPNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIH-VGAKERLDMLMLSR 120

Query: 121 RSLSDLQTLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKN 159
           R++SD+   R D       +       V+ +LPR++  +LM+E  N
Sbjct: 121 RTVSDVTIGRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNN 161

[Close]

BLAST of Cucsa.012710 vs. TAIR10
Match: AT1G71015.1 (AT1G71015.1 unknown protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 64/170 (37.65%), Postives = 104/170 (61.18%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN++G      K+T  +M INGE+ K+  P  A  V   +P H+L ES+++K  G+RAK
Sbjct: 1   MGNSLGT-----KKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120
           PL+PH +LE K +YF+++LP   ++  + RR  S +  +SA +RLE L LSRRS SDL  
Sbjct: 61  PLEPHQNLESKRIYFMVELPRTWKER-TPRRVRSGI-QMSAKERLENLKLSRRSSSDLSV 120

Query: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYC 171
           ++   +++  +D   +   VK +LP+ + E+L KE ++  + + +I   C
Sbjct: 121 MK---KKTEVNDEEREVSSVKLKLPKWKIEKLRKESESGSDFSNKITQLC 160

[Close]

BLAST of Cucsa.012710 vs. TAIR10
Match: AT5G37840.1 (AT5G37840.1 BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1))

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24
Identity = 64/185 (34.59%), Postives = 105/185 (56.76%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN I      ++   KVMKI+G+  ++  P TA + T  YP  +L +S+++K  G+RAK
Sbjct: 1   MGNTI----MVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPAL-PRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQ 120
           PL+P+  L+P   YFL+ LP +  R+    RR  S   ++ A +RLE L+LSRR++SD+ 
Sbjct: 61  PLEPNQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVG 120

Query: 121 TLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYG 180
             R D      + G  +   V+ +LPR++  +LM+E  +  EV  +I+     S   + G
Sbjct: 121 AARSDVVGDGPELGHTR---VRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGGIQG 178

Query: 181 NQDDE 185
            +D++
Sbjct: 181 GRDND 178

[Close]

BLAST of Cucsa.012710 vs. NCBI nr
Match: gi|700202755|gb|KGN57888.1| (hypothetical protein Csa_3G368690 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 6.5e-110
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120
           PLDPHCHLEPKTLYFLLQLP LPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120

Query: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180
           LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN
Sbjct: 121 LRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGN 180

Query: 181 QDDELFWKMGGAYSGKAC 199
           QDDELFWKMGGAYSGKAC
Sbjct: 181 QDDELFWKMGGAYSGKAC 198

[Close]

BLAST of Cucsa.012710 vs. NCBI nr
Match: gi|449467677|ref|XP_004151549.1| (PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 1.8e-99
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 1


Query: 19  MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 78
           MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ
Sbjct: 1   MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 60

Query: 79  LPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 138
           LP LPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV
Sbjct: 61  LPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 120

Query: 139 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYSGKAC 198
           QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYSGKAC
Sbjct: 121 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYSGKAC 180

[Close]

BLAST of Cucsa.012710 vs. NCBI nr
Match: gi|659114591|ref|XP_008457131.1| (PREDICTED: uncharacterized protein At1g66480-like [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 1.0e-70
Identity = 140/161 (86.96%), Postives = 144/161 (89.44%), Query Frame = 1


Query: 19  MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 78
           MKINGET KITLPTTAYEVTSHYP+HLLYESKSL  FGLRAKPLDPHC L PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 79  LPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 138
           LP L     SLRRTCSDLH LSASDRLECLLLSRRS+SDLQTLRFDPQRS   DGAAK V
Sbjct: 61  LPTLYGVDRSLRRTCSDLH-LSASDRLECLLLSRRSVSDLQTLRFDPQRSLIHDGAAKSV 120

Query: 139 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYG 180
           QVKFQLPRAEFERLMKECKN VEVTK+IVD+CARSRDNVYG
Sbjct: 121 QVKFQLPRAEFERLMKECKNNVEVTKKIVDFCARSRDNVYG 160

[Close]

BLAST of Cucsa.012710 vs. NCBI nr
Match: gi|590696217|ref|XP_007045105.1| (Encodes a protein whose expression is responsive to nematode infection, putative [Theobroma cacao])

HSP 1 Score: 155.6 bits (392), Expect = 9.0e-35
Identity = 87/179 (48.60%), Postives = 117/179 (65.36%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN++G      K+TTKVMKINGET K+  P  A EV   YP H+L ES+S+K FG+RAK
Sbjct: 1   MGNSLGG-----KKTTKVMKINGETFKLKTPVKAEEVVKDYPGHVLLESESVKHFGIRAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQT 120
           PL  H  LEPK LYFL++LP  P++  + RR  S + N+SA DRLE L+LSRRS+SDL  
Sbjct: 61  PLQSHQSLEPKRLYFLVELPEAPKEIVT-RRVRSGI-NMSAKDRLESLMLSRRSVSDLTL 120

Query: 121 LR---FDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDN 177
           ++     P+ S  +   +  ++VK +LPRAE ERLMKE  N+ E  ++I+  C  +  N
Sbjct: 121 MKPKCVIPEESEEEGSESGAMRVKMRLPRAEVERLMKESNNEAEAAEKIMQLCVANTRN 172

[Close]

BLAST of Cucsa.012710 vs. NCBI nr
Match: gi|802761901|ref|XP_012089911.1| (PREDICTED: uncharacterized protein At1g66480 [Jatropha curcas])

HSP 1 Score: 149.4 bits (376), Expect = 6.5e-33
Identity = 83/173 (47.98%), Postives = 118/173 (68.21%), Query Frame = 1


Query: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60
           MGN+IGRG +      K+MK++GET K+  P  A +V   YP H+L +S ++K FG+RAK
Sbjct: 1   MGNSIGRGKK-----AKIMKVDGETFKLKTPAKAMDVVKDYPGHVLLDSDAVKHFGIRAK 60

Query: 61  PLDPHCHLEPKTLYFLLQLPALPRDHCSL---RRTCSDLHNLSASDRLECLLLSRRSLSD 120
           PL+P   L PK +YFL++LP LP +   +   RR  S +H LSA DRLE L+LSRRS+SD
Sbjct: 61  PLEPEMELNPKKIYFLVELPKLPEEKEPISITRRVRSGIH-LSAKDRLEFLMLSRRSVSD 120

Query: 121 LQTLRFDPQRSSTDDG--AAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVD 169
           L  +R  P +   DDG   + PV+VK +LP+A+ E+L++E K++VEV ++IVD
Sbjct: 121 LSIVRPLPSQ-IPDDGHNGSGPVRVKMRLPKAQMEKLVEESKDEVEVAEKIVD 166

The following BLAST results are available for this feature:

BLAST of Cucsa.012710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1648_ARATH	1.9e-24	39.76	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1	[more]

BLAST of Cucsa.012710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7W0_CUCSA	4.6e-110	99.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G368690 PE=4 SV=1	[more]
A0A061E984_THECC	6.3e-35	48.60	Encodes a protein whose expression is responsive to nematode infection, putative...	[more]
A0A067JIK5_JATCU	4.5e-33	47.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02495 PE=4 SV=1	[more]
A0A059BSU6_EUCGR	2.9e-32	46.15	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1	[more]
A0A059BT95_EUCGR	2.9e-32	46.15	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1	[more]

BLAST of Cucsa.012710 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01340.1	7.8e-29	43.98	Encodes a protein whose expression is responsive to nematode infecti...	[more]
AT1G66480.1	1.1e-25	39.76	plastid movement impaired 2	[more]
AT1G71015.1	1.4e-25	37.65	unknown protein	[more]
AT5G37840.1	1.5e-24	34.59	BEST Arabidopsis thaliana protein match is: plastid movement impaire...	[more]

BLAST of Cucsa.012710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202755\|gb\|KGN57888.1\|	6.5e-110	99.49	hypothetical protein Csa_3G368690 [Cucumis sativus]	[more]
gi\|449467677\|ref\|XP_004151549.1\|	1.8e-99	99.44	PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus]	[more]
gi\|659114591\|ref\|XP_008457131.1\|	1.0e-70	86.96	PREDICTED: uncharacterized protein At1g66480-like [Cucumis melo]	[more]
gi\|590696217\|ref\|XP_007045105.1\|	9.0e-35	48.60	Encodes a protein whose expression is responsive to nematode infection, putative...	[more]
gi\|802761901\|ref\|XP_012089911.1\|	6.5e-33	47.98	PREDICTED: uncharacterized protein At1g66480 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.012710.1	Cucsa.012710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..115 score: 1.0
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 2..184 score: 9.9
None	No IPR available	PANTHER	PTHR33148:SF6	SUBFAMILY NOT NAMED	coord: 2..184 score: 9.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.012710	Cla013167	Watermelon (97103) v1	cgywmB367
Cucsa.012710	Csa3G368690	Cucumber (Chinese Long) v2	cgycuB291
Cucsa.012710	ClCG05G010920	Watermelon (Charleston Gray)	cgywcgB345
Cucsa.012710	CSPI03G22310	Wild cucumber (PI 183967)	cgycpiB300
Cucsa.012710	CmaCh01G003550	Cucurbita maxima (Rimu)	cgycmaB0551
Cucsa.012710	CmoCh01G003710	Cucurbita moschata (Rifu)	cgycmoB0552
Cucsa.012710	Lsi05G003030	Bottle gourd (USVL1VR-Ls)	cgylsiB322
Cucsa.012710	Cp4.1LG02g16700	Cucurbita pepo (Zucchini)	cgycpeB0531
Cucsa.012710	CsaV3_3G021660	Cucumber (Chinese Long) v3	cgycucB303
Cucsa.012710	Cla97C05G093220	Watermelon (97103) v2	cgywmbB351
Cucsa.012710	Bhi01G001346	Wax gourd	cgywgoB393
Cucsa.012710	Carg07442	Silver-seed gourd	carcgyB0859

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.012710	Cucurbita pepo (Zucchini)	cgycpeB0532
Cucsa.012710	Melon (DHL92) v3.6.1	cgymedB338
Cucsa.012710	Cucurbita maxima (Rimu)	cgycmaB0548
Cucsa.012710	Cucurbita moschata (Rifu)	cgycmoB0549
Cucsa.012710	Wild cucumber (PI 183967)	cgycpiB299
Cucsa.012710	Cucumber (Chinese Long) v2	cgycuB290
Cucsa.012710	Melon (DHL92) v3.5.1	cgymeB343