Cla013167 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013167
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr5 : 11966337 .. 11967215 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATGCAATGGGAAAAGGATCAAGAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGAGAAACCTTCAAAATAACAATTCCAACCACAGCCTACGAAGTCACAAGCCACCATCCAAATCACCTTCTCTACGAATCCCAATCCCTCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTAGCCACCAACTCAAACCTAAAACCCTATACTTCCTCCTCCAATTGCCAACTCTCCCCGGCAACCACCGTCCGCTTCGTCGCGTTTGTTCCGACCTTCATTTGTCTGCCTCCGACCGCCTCGAGTGCCTCATGCTCTCTCGTCGATCGGTTTCCGACCTTCAAACTCTTCGGTTCAATCCTCCGAGGTTGTCGACCGACGGTGGTGCTACTAAGCCGATGCAGGTCAAATTTCGAGTGCGGAGGGTGGAATTCGAGAGGTTGATGAAGGAATGTAAGGACAAGGTGGAGGCGACTGAGAGGATTGTTGATTTCTTTGCAAGAAGTAGAGATAATGGCGATGGGGGCCGAGAGGAGGAGTTATTTTGGAAGATGGGTAGTGCATGTATTGGTAAACCGCCCCAGGTGCGTTTTAATTTTAGCTGCTTTATTTTCTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTCCATTTTGAGAATCCCACTTGAATTATGCTATTTTGTTTCTTACCTGTTTTATTTGAGTTCTTCAATTTTATGGTAAAATTGTTTTAACTTTCTAAATATTTACTGATCTGTAATTTTGTATTCTTTTTTATTTTTTTTTATTTTTAAAAGTTTTGA

mRNA sequence

ATGGGAAATGCAATGGGAAAAGGATCAAGAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGAGAAACCTTCAAAATAACAATTCCAACCACAGCCTACGAAGTCACAAGCCACCATCCAAATCACCTTCTCTACGAATCCCAATCCCTCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTAGCCACCAACTCAAACCTAAAACCCTATACTTCCTCCTCCAATTGCCAACTCTCCCCGGCAACCACCGTCCGCTTCGTCGCGTTTGTTCCGACCTTCATTTGTCTGCCTCCGACCGCCTCGAGTGCCTCATGCTCTCTCGTCGATCGGTTTCCGACCTTCAAACTCTTCGGTTCAATCCTCCGAGGTTGTCGACCGACGGTGGTGCTACTAAGCCGATGCAGGTCAAATTTCGAGTGCGGAGGGTGGAATTCGAGAGGTTGATGAAGGAATGTAAGGACAAGGTGGAGGCGACTGAGAGGATTGTTGATTTCTTTGCAAGAAGTAGAGATAATGGCGATGGGGGCCGAGAGGAGGAGTTATTTTGGAAGATGGGTAGTGCATGTATTGGTAAACCGCCCCAGTTTTGA

Coding sequence (CDS)

ATGGGAAATGCAATGGGAAAAGGATCAAGAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGAGAAACCTTCAAAATAACAATTCCAACCACAGCCTACGAAGTCACAAGCCACCATCCAAATCACCTTCTCTACGAATCCCAATCCCTCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTAGCCACCAACTCAAACCTAAAACCCTATACTTCCTCCTCCAATTGCCAACTCTCCCCGGCAACCACCGTCCGCTTCGTCGCGTTTGTTCCGACCTTCATTTGTCTGCCTCCGACCGCCTCGAGTGCCTCATGCTCTCTCGTCGATCGGTTTCCGACCTTCAAACTCTTCGGTTCAATCCTCCGAGGTTGTCGACCGACGGTGGTGCTACTAAGCCGATGCAGGTCAAATTTCGAGTGCGGAGGGTGGAATTCGAGAGGTTGATGAAGGAATGTAAGGACAAGGTGGAGGCGACTGAGAGGATTGTTGATTTCTTTGCAAGAAGTAGAGATAATGGCGATGGGGGCCGAGAGGAGGAGTTATTTTGGAAGATGGGTAGTGCATGTATTGGTAAACCGCCCCAGTTTTGA

Protein sequence

MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRAKPLDPSHQLKPKTLYFLLQLPTLPGNHRPLRRVCSDLHLSASDRLECLMLSRRSVSDLQTLRFNPPRLSTDGGATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDNGDGGREEELFWKMGSACIGKPPQF

Homology

[Close]

BLAST of Cla013167 vs. Swiss-Prot
Match: Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-28
Identity = 79/193 (40.93%), Postives = 110/193 (56.99%), Query Frame = 1


Query: 5   MGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRAKPLD 64
           MG     +RKR  KVMKI+GETF+I  P TA EVT+ +P ++L +SQ++K FG+R+KPL+
Sbjct: 1   MGNSITVKRKR-AKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLE 60

Query: 65  PSHQLKPKTLYFLLQLPTLP--------GNHRPLRRVCSDLHLSASDRLECLMLSRRSVS 124
           P+  LKPK  YFL++LP LP         N  P RRV S +H+ A +RL+ LMLSRR+VS
Sbjct: 61  PNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVS 120

Query: 125 DLQTLRFNPPRLSTDGG-------ATKPMQVKFRVRRVEFERLMKECKDKVEA-TERIVD 182
           D+   R       +DGG             V+ R+ R +  +LM+E  +   A  E+I+ 
Sbjct: 121 DVTIGR-------SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILG 180

[Close]

BLAST of Cla013167 vs. TrEMBL
Match: A0A0A0L7W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G368690 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 7.9e-78
Identity = 151/197 (76.65%), Postives = 172/197 (87.31%), Query Frame = 1


Query: 1   MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRA 60
           MGNA+G+GS RR+KRTTKVMKINGET KIT+PTTAYEVTSH+P+HLLYES+SLK FGLRA
Sbjct: 1   MGNAIGRGS-RRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRA 60

Query: 61  KPLDPSHQLKPKTLYFLLQLPTLPGNHRPLRRVCSDLH-LSASDRLECLMLSRRSVSDLQ 120
           KPLDP   L+PKTLYFLLQLPTLP +H  LRR CSDLH LSASDRLECL+LSRRS+SDLQ
Sbjct: 61  KPLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQ 120

Query: 121 TLRFNPPRLSTDGGATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDNGDG 180
           TLRF+P R STD GA KP+QVKF++ R EFERLMKECK+KVE T+RIVD+ ARSRDN  G
Sbjct: 121 TLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYG 180

Query: 181 GREEELFWKMGSACIGK 197
            +++ELFWKMG A  GK
Sbjct: 181 NQDDELFWKMGGAYSGK 196

[Close]

BLAST of Cla013167 vs. TrEMBL
Match: A0A067JIK5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02495 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-38
Identity = 90/200 (45.00%), Postives = 130/200 (65.00%), Query Frame = 1


Query: 1   MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRA 60
           MGN++G+G +       K+MK++GETFK+  P  A +V   +P H+L +S ++K FG+RA
Sbjct: 1   MGNSIGRGKK------AKIMKVDGETFKLKTPAKAMDVVKDYPGHVLLDSDAVKHFGIRA 60

Query: 61  KPLDPSHQLKPKTLYFLLQLPTLPGNHRPL---RRVCSDLHLSASDRLECLMLSRRSVSD 120
           KPL+P  +L PK +YFL++LP LP    P+   RRV S +HLSA DRLE LMLSRRSVSD
Sbjct: 61  KPLEPEMELNPKKIYFLVELPKLPEEKEPISITRRVRSGIHLSAKDRLEFLMLSRRSVSD 120

Query: 121 LQTLRFNPPRLSTDG-GATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDN 180
           L  +R  P ++  DG   + P++VK R+ + + E+L++E KD+VE  E+IVD F    ++
Sbjct: 121 LSIVRPLPSQIPDDGHNGSGPVRVKMRLPKAQMEKLVEESKDEVEVAEKIVDLF--MENS 180

Query: 181 GDGGREEELFWKMGSACIGK 197
           GD  R +   WK     IG+
Sbjct: 181 GDRNRRQ---WKPELGSIGE 189

[Close]

BLAST of Cla013167 vs. TrEMBL
Match: A0A061EH62_THECC (Plastid movement impaired 2 OS=Theobroma cacao GN=TCM_019256 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-35
Identity = 86/200 (43.00%), Postives = 123/200 (61.50%), Query Frame = 1


Query: 1   MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRA 60
           MGN+MG       ++  KVMKI+GETFK+  P  A++V   +P H+L +S+++K FG+RA
Sbjct: 1   MGNSMGG------RKKAKVMKIDGETFKLKTPVRAWDVVKDYPGHVLLDSEAVKHFGIRA 60

Query: 61  KPLDPSHQLKPKTLYFLLQLPTLPGNHRPLRRVCSDLHLSASDRLECLMLSRRSVSDLQT 120
           KPL+P   LKPK +YFL++LP  P    P R     +H+SA DRLECLMLSRRSVSDL  
Sbjct: 61  KPLEPQQDLKPKKIYFLVELPKFPEEKAPRRVRSGGIHMSAKDRLECLMLSRRSVSDLSM 120

Query: 121 LRFNPPRLSTD--GGATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDNGD 180
           +R     L +D  G ++  M VK R+ + +  +L++E +D VE  E+I+D +  +   GD
Sbjct: 121 VR-PSSSLGSDGLGRSSGGMTVKMRLPKSQMAKLVEESRDGVEVAEKILDLYVENAGGGD 180

Query: 181 GGREEELF--WKMGSACIGK 197
              +  L   WK G   IG+
Sbjct: 181 TDNQMHLEAPWKPGLGSIGE 193

[Close]

BLAST of Cla013167 vs. TrEMBL
Match: A0A059BSU6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-35
Identity = 80/171 (46.78%), Postives = 109/171 (63.74%), Query Frame = 1


Query: 1   MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRA 60
           MGN++G G  RR     KVMKI GET K+  P  A +V   HP H+L +S+S+K FG+RA
Sbjct: 1   MGNSVGSGRNRR----AKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRA 60

Query: 61  KPLDPSHQLKPKTLYFLLQLPTLP-GNHRPLRRVCSDLHLSASDRLECLMLSRRSVSDLQ 120
           +PL+P H+LKPK +YFL++LP  P G+ +  RRV S L + A DRLECLMLSRR+ SD+ 
Sbjct: 61  RPLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGLQMGAKDRLECLMLSRRAASDM- 120

Query: 121 TLRFNPPRLSTDGGATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFF 171
                P   S    +  P+Q+K R+ R + ++LM+E  D  E   RIVD +
Sbjct: 121 ---VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVDLY 163

[Close]

BLAST of Cla013167 vs. TrEMBL
Match: A0A059BT95_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-35
Identity = 80/171 (46.78%), Postives = 109/171 (63.74%), Query Frame = 1


Query: 1   MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRA 60
           MGN++G G  RR     KVMKI GET K+  P  A +V   HP H+L +S+S+K FG+RA
Sbjct: 1   MGNSVGSGRNRR----AKVMKITGETLKLRTPVRACQVVDGHPGHVLLDSESVKHFGIRA 60

Query: 61  KPLDPSHQLKPKTLYFLLQLPTLP-GNHRPLRRVCSDLHLSASDRLECLMLSRRSVSDLQ 120
           +PL+P H+LKPK +YFL++LP  P G+ +  RRV S L + A DRLECLMLSRR+ SD+ 
Sbjct: 61  RPLEPHHELKPKKIYFLVELPKFPDGHEKAFRRVRSGLQMGAKDRLECLMLSRRAASDM- 120

Query: 121 TLRFNPPRLSTDGGATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFF 171
                P   S    +  P+Q+K R+ R + ++LM+E  D  E   RIVD +
Sbjct: 121 ---VRPTEASFQPESAAPVQMKMRIPRAQLDKLMEESSDDAEVARRIVDLY 163

[Close]

BLAST of Cla013167 vs. NCBI nr
Match: gi|700202755|gb|KGN57888.1| (hypothetical protein Csa_3G368690 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 151/197 (76.65%), Postives = 172/197 (87.31%), Query Frame = 1


Query: 1   MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRA 60
           MGNA+G+GS RR+KRTTKVMKINGET KIT+PTTAYEVTSH+P+HLLYES+SLK FGLRA
Sbjct: 1   MGNAIGRGS-RRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRA 60

Query: 61  KPLDPSHQLKPKTLYFLLQLPTLPGNHRPLRRVCSDLH-LSASDRLECLMLSRRSVSDLQ 120
           KPLDP   L+PKTLYFLLQLPTLP +H  LRR CSDLH LSASDRLECL+LSRRS+SDLQ
Sbjct: 61  KPLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQ 120

Query: 121 TLRFNPPRLSTDGGATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDNGDG 180
           TLRF+P R STD GA KP+QVKF++ R EFERLMKECK+KVE T+RIVD+ ARSRDN  G
Sbjct: 121 TLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYG 180

Query: 181 GREEELFWKMGSACIGK 197
            +++ELFWKMG A  GK
Sbjct: 181 NQDDELFWKMGGAYSGK 196

[Close]

BLAST of Cla013167 vs. NCBI nr
Match: gi|449467677|ref|XP_004151549.1| (PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 136/178 (76.40%), Postives = 154/178 (86.52%), Query Frame = 1


Query: 20  MKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRAKPLDPSHQLKPKTLYFLLQ 79
           MKINGET KIT+PTTAYEVTSH+P+HLLYES+SLK FGLRAKPLDP   L+PKTLYFLLQ
Sbjct: 1   MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 60

Query: 80  LPTLPGNHRPLRRVCSDLH-LSASDRLECLMLSRRSVSDLQTLRFNPPRLSTDGGATKPM 139
           LPTLP +H  LRR CSDLH LSASDRLECL+LSRRS+SDLQTLRF+P R STD GA KP+
Sbjct: 61  LPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 120

Query: 140 QVKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDNGDGGREEELFWKMGSACIGK 197
           QVKF++ R EFERLMKECK+KVE T+RIVD+ ARSRDN  G +++ELFWKMG A  GK
Sbjct: 121 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYSGK 178

[Close]

BLAST of Cla013167 vs. NCBI nr
Match: gi|659114591|ref|XP_008457131.1| (PREDICTED: uncharacterized protein At1g66480-like [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 2.3e-62
Identity = 124/157 (78.98%), Postives = 136/157 (86.62%), Query Frame = 1


Query: 20  MKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRAKPLDPSHQLKPKTLYFLLQ 79
           MKINGETFKIT+PTTAYEVTSH+PNHLLYES+SL QFGLRAKPLDP  QL+PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 80  LPTLPGNHRPLRRVCSDLHLSASDRLECLMLSRRSVSDLQTLRFNPPRLSTDGGATKPMQ 139
           LPTL G  R LRR CSDLHLSASDRLECL+LSRRSVSDLQTLRF+P R     GA K +Q
Sbjct: 61  LPTLYGVDRSLRRTCSDLHLSASDRLECLLLSRRSVSDLQTLRFDPQRSLIHDGAAKSVQ 120

Query: 140 VKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDN 177
           VKF++ R EFERLMKECK+ VE T++IVDF ARSRDN
Sbjct: 121 VKFQLPRAEFERLMKECKNNVEVTKKIVDFCARSRDN 157

[Close]

BLAST of Cla013167 vs. NCBI nr
Match: gi|802761901|ref|XP_012089911.1| (PREDICTED: uncharacterized protein At1g66480 [Jatropha curcas])

HSP 1 Score: 167.2 bits (422), Expect = 3.0e-38
Identity = 90/200 (45.00%), Postives = 130/200 (65.00%), Query Frame = 1


Query: 1   MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRA 60
           MGN++G+G +       K+MK++GETFK+  P  A +V   +P H+L +S ++K FG+RA
Sbjct: 1   MGNSIGRGKK------AKIMKVDGETFKLKTPAKAMDVVKDYPGHVLLDSDAVKHFGIRA 60

Query: 61  KPLDPSHQLKPKTLYFLLQLPTLPGNHRPL---RRVCSDLHLSASDRLECLMLSRRSVSD 120
           KPL+P  +L PK +YFL++LP LP    P+   RRV S +HLSA DRLE LMLSRRSVSD
Sbjct: 61  KPLEPEMELNPKKIYFLVELPKLPEEKEPISITRRVRSGIHLSAKDRLEFLMLSRRSVSD 120

Query: 121 LQTLRFNPPRLSTDG-GATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDN 180
           L  +R  P ++  DG   + P++VK R+ + + E+L++E KD+VE  E+IVD F    ++
Sbjct: 121 LSIVRPLPSQIPDDGHNGSGPVRVKMRLPKAQMEKLVEESKDEVEVAEKIVDLF--MENS 180

Query: 181 GDGGREEELFWKMGSACIGK 197
           GD  R +   WK     IG+
Sbjct: 181 GDRNRRQ---WKPELGSIGE 189

[Close]

BLAST of Cla013167 vs. NCBI nr
Match: gi|590652162|ref|XP_007033077.1| (Plastid movement impaired 2 [Theobroma cacao])

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 86/200 (43.00%), Postives = 123/200 (61.50%), Query Frame = 1


Query: 1   MGNAMGKGSRRRRKRTTKVMKINGETFKITIPTTAYEVTSHHPNHLLYESQSLKQFGLRA 60
           MGN+MG       ++  KVMKI+GETFK+  P  A++V   +P H+L +S+++K FG+RA
Sbjct: 1   MGNSMGG------RKKAKVMKIDGETFKLKTPVRAWDVVKDYPGHVLLDSEAVKHFGIRA 60

Query: 61  KPLDPSHQLKPKTLYFLLQLPTLPGNHRPLRRVCSDLHLSASDRLECLMLSRRSVSDLQT 120
           KPL+P   LKPK +YFL++LP  P    P R     +H+SA DRLECLMLSRRSVSDL  
Sbjct: 61  KPLEPQQDLKPKKIYFLVELPKFPEEKAPRRVRSGGIHMSAKDRLECLMLSRRSVSDLSM 120

Query: 121 LRFNPPRLSTD--GGATKPMQVKFRVRRVEFERLMKECKDKVEATERIVDFFARSRDNGD 180
           +R     L +D  G ++  M VK R+ + +  +L++E +D VE  E+I+D +  +   GD
Sbjct: 121 VR-PSSSLGSDGLGRSSGGMTVKMRLPKSQMAKLVEESRDGVEVAEKILDLYVENAGGGD 180

Query: 181 GGREEELF--WKMGSACIGK 197
              +  L   WK G   IG+
Sbjct: 181 TDNQMHLEAPWKPGLGSIGE 193

The following BLAST results are available for this feature:

BLAST of Cla013167 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1648_ARATH	2.8e-28	40.93	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1	[more]

BLAST of Cla013167 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7W0_CUCSA	7.9e-78	76.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G368690 PE=4 SV=1	[more]
A0A067JIK5_JATCU	2.1e-38	45.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02495 PE=4 SV=1	[more]
A0A061EH62_THECC	1.3e-35	43.00	Plastid movement impaired 2 OS=Theobroma cacao GN=TCM_019256 PE=4 SV=1	[more]
A0A059BSU6_EUCGR	1.7e-35	46.78	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1	[more]
A0A059BT95_EUCGR	1.7e-35	46.78	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02820 PE=4 SV=1	[more]

BLAST of Cla013167 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202755\|gb\|KGN57888.1\|	1.1e-77	76.65	hypothetical protein Csa_3G368690 [Cucumis sativus]	[more]
gi\|449467677\|ref\|XP_004151549.1\|	1.1e-69	76.40	PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus]	[more]
gi\|659114591\|ref\|XP_008457131.1\|	2.3e-62	78.98	PREDICTED: uncharacterized protein At1g66480-like [Cucumis melo]	[more]
gi\|802761901\|ref\|XP_012089911.1\|	3.0e-38	45.00	PREDICTED: uncharacterized protein At1g66480 [Jatropha curcas]	[more]
gi\|590652162\|ref\|XP_007033077.1\|	1.8e-35	43.00	Plastid movement impaired 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009624	response to nematode
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013167	Cla013167.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..111 score: 1.2
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 2..184 score: 4.1
None	No IPR available	PANTHER	PTHR33148:SF6	SUBFAMILY NOT NAMED	coord: 2..184 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla013167	Cla97C05G093220	Watermelon (97103) v2	wmwmbB206
Cla013167	ClCG05G010920	Watermelon (Charleston Gray)	wcgwmB286
Cla013167	Cucsa.012710	Cucumber (Gy14) v1	cgywmB367
Cla013167	CmaCh01G003550	Cucurbita maxima (Rimu)	cmawmB434
Cla013167	CmoCh01G003710	Cucurbita moschata (Rifu)	cmowmB427
Cla013167	Lsi05G003030	Bottle gourd (USVL1VR-Ls)	lsiwmB361
Cla013167	Cp4.1LG02g16700	Cucurbita pepo (Zucchini)	cpewmB568
Cla013167	CsGy3G021050	Cucumber (Gy14) v2	cgybwmB232
Cla013167	Carg07442	Silver-seed gourd	carwmB0760
Cla013167	CsaV3_3G021660	Cucumber (Chinese Long) v3	cucwmB254
Cla013167	Bhi01G001346	Wax gourd	wgowmB202

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013167	Cucurbita pepo (Zucchini)	cpewmB614
Cla013167	Melon (DHL92) v3.6.1	medwmB448
Cla013167	Silver-seed gourd	carwmB0166
Cla013167	Cucurbita maxima (Rimu)	cmawmB243
Cla013167	Cucurbita moschata (Rifu)	cmowmB232
Cla013167	Melon (DHL92) v3.5.1	mewmB461