Cp4.1LG01g19920 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g19920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPolcalcin
LocationCp4.1LG01 : 17012795 .. 17013049 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

mRNA sequence

ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

Coding sequence (CDS)

ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

Protein sequence

MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISYEEFTNFALANRGLVKDVAKIF
Homology
[Close]
BLAST of Cp4.1LG01g19920 vs. Swiss-Prot
Match: POLC3_CHEAL (Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.3e-31
Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 1 

Query: 3  DDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD  DR+RIFKRFDTNGDGKISS+ELG++LKTLGSVT DEV RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 YEEFTNFALANRGLVKDVAKIF 85
          ++EFT+FA ANRGLVKDV+KIF
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]
BLAST of Cp4.1LG01g19920 vs. Swiss-Prot
Match: ALL3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 9.7e-31
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD Q+  + +RIFKRFD NGDGKISS+ELGE+LKTLGSVT +E+ RMMAEIDTDGDGF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          IS+EEFT FA ANRGLVKDVAKIF
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. Swiss-Prot
Match: POLC1_TOBAC (Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.8e-30
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD  DR+RIFKRFD NGDGKISS ELGE+LK LGSVT++EV  MMAE+DTDGDGF
Sbjct: 1  MAEDPQDIADRERIFKRFDLNGDGKISSAELGETLKMLGSVTSEEVQHMMAELDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEF  FA ANRGL+KDVAK+F
Sbjct: 61 ISYEEFEEFARANRGLIKDVAKVF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.2e-30
Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 1 

Query: 1  MSDD-AQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDG 60
          M+DD  QDK +R+RIFKRFD NGDGKIS+ ELGE+LKTLGS+T DEV  MMAEIDTDGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTNFALANRGLVKDVAKIF 85
          FIS++EFT+F  ANRGL+KDVAKIF
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAKIF 85

[Close]
BLAST of Cp4.1LG01g19920 vs. Swiss-Prot
Match: POLC4_ALNGL (Polcalcin Aln g 4 OS=Alnus glutinosa PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.1e-29
Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 1 

Query: 1  MSDD-AQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDG 60
          M+DD  QD+ + +RIFK FD NGDGKIS++ELG++LKTLGSVT DEV  MMAEIDTDGDG
Sbjct: 1  MADDHPQDQAEHERIFKCFDANGDGKISASELGDALKTLGSVTPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTNFALANRGLVKDVAKIF 85
          FIS++EFTNFA ANRGLVKDVAKIF
Sbjct: 61 FISFQEFTNFARANRGLVKDVAKIF 85

[Close]
BLAST of Cp4.1LG01g19920 vs. TrEMBL
Match: A0A0A0KQB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-31
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+ +R+RIFKRFD NGDGKISS ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEFT+FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. TrEMBL
Match: A0A067KMY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.4e-30
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDAQD  DR+RIFKRFD NGDGKIS+ ELG+ LKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT+FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. TrEMBL
Match: G7K1Y2_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 9.8e-30
Identity = 68/84 (80.95%), Postives = 74/84 (88.10%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD  DR+RIFKRFD NGDGKISS ELGE+L+TLGSVT DEV RMM EIDTDGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT FA ANRGLVKDVAKIF
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. TrEMBL
Match: A0A0K9RB15_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093360 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 9.8e-30
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 3  DDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD  DR+RIFKRFDTNGDGKISS+ELGE+LKTLGSVT+DEV RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGEALKTLGSVTSDEVCRMMAEIDTDGDGFIS 64

Query: 63 YEEFTNFALANRGLVKDVAKIF 85
          ++EFT+FA ANRGL+KDVAKIF
Sbjct: 65 FDEFTDFARANRGLIKDVAKIF 86

[Close]
BLAST of Cp4.1LG01g19920 vs. TrEMBL
Match: A0A0M3TIL4_SALKA (Polcalcin OS=Salsola kali PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-29
Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 1 

Query: 3  DDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD  DR+RIFKRFDTNGDGKISS+ELG++LKTLGSVT+DE+ RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDLADRERIFKRFDTNGDGKISSSELGDALKTLGSVTSDEIVRMMAEIDTDGDGFIS 64

Query: 63 YEEFTNFALANRGLVKDVAKIF 85
          +EEFT FA ANRGL+KDVAKIF
Sbjct: 65 FEEFTEFARANRGLIKDVAKIF 86

[Close]
BLAST of Cp4.1LG01g19920 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 124.4 bits (311), Expect = 3.3e-29
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 1 

Query: 4  DAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +K + DRIFK+FD NGDGKIS+ EL E+LKTLGSVT D+V RMMAEIDTDGDG ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISY 62

Query: 64 EEFTNFALANRGLVKDVAKIF 85
          +EFT+FA ANRGL+KDVAKIF
Sbjct: 63 QEFTDFAGANRGLMKDVAKIF 83

[Close]
BLAST of Cp4.1LG01g19920 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 124.4 bits (311), Expect = 3.3e-29
Identity = 58/81 (71.60%), Postives = 72/81 (88.89%), Query Frame = 1 

Query: 4  DAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +K + DRIFK+FD NGDGKIS+ ELG++LK LGSVT++++ RMMAEIDTDGDG+ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTNFALANRGLVKDVAKIF 85
          +EF +FA ANRGL+KDVAKIF
Sbjct: 63 QEFIDFASANRGLMKDVAKIF 83

[Close]
BLAST of Cp4.1LG01g19920 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-11
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 13 RIFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEFTNFAL 72
          ++F +FD NGDGKIS +ELG   K++G S T +E++R++ EID D DGFI+ EEF     
Sbjct: 23 KVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICR 82

Query: 73 ANRGLVK 79
          ++   V+
Sbjct: 83 SSSSAVE 89

[Close]
BLAST of Cp4.1LG01g19920 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-10
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 1 

Query: 12 DRIFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEF 67
          + +FK+FD NGDGKISS ELG  + +LG  V  +E+ + + EID  GDG+I++EEF
Sbjct: 39 EAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEF 94

[Close]
BLAST of Cp4.1LG01g19920 vs. TAIR10
Match: AT3G51920.1 (AT3G51920.1 calmodulin 9)

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-10
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 1 

Query: 14  IFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEFTNFALA 73
           +F+ FD +GDG IS  ELGE +K +G  +T +E   M+ E D DGDGF+S+ EF+   +A
Sbjct: 89  VFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFSKMMIA 148

[Close]
BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: gi|659121144|ref|XP_008460520.1| (PREDICTED: polcalcin Ole e 3 [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 2.0e-31
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+ +R+RIFKRFD NGDGKISS+ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSSELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEFT+FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: gi|449445084|ref|XP_004140303.1| (PREDICTED: polcalcin Ole e 3 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 2.6e-31
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+ +R+RIFKRFD NGDGKISS ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEFT+FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: gi|1009126557|ref|XP_015880220.1| (PREDICTED: polcalcin Bet v 4 [Ziziphus jujuba])

HSP 1 Score: 141.4 bits (355), Expect = 7.4e-31
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD +DK +RDRIFKRFD+NGDGKISS ELGESLK LGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPKDKEERDRIFKRFDSNGDGKISSQELGESLKALGSVTADEVSRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT+FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFACANRGLIKDVAKIF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: gi|802634001|ref|XP_012077783.1| (PREDICTED: polcalcin Che a 3-like [Jatropha curcas])

HSP 1 Score: 138.3 bits (347), Expect = 6.3e-30
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 1 

Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDAQD  DR+RIFKRFD NGDGKIS+ ELG+ LKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT+FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]
BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: gi|902208554|gb|KNA15982.1| (hypothetical protein SOVF_093360 [Spinacia oleracea])

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-29
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 3  DDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD  DR+RIFKRFDTNGDGKISS+ELGE+LKTLGSVT+DEV RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGEALKTLGSVTSDEVCRMMAEIDTDGDGFIS 64

Query: 63 YEEFTNFALANRGLVKDVAKIF 85
          ++EFT+FA ANRGL+KDVAKIF
Sbjct: 65 FDEFTDFARANRGLIKDVAKIF 86

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g19920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POLC3_CHEAL3.3e-3181.71Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1[more]
ALL3_OLEEU9.7e-3178.57Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1[more]
POLC1_TOBAC2.8e-3076.19Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1[more]
POLC4_BETPN8.2e-3076.47Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1[more]
POLC4_ALNGL4.1e-2976.47Polcalcin Aln g 4 OS=Alnus glutinosa PE=1 SV=1[more]
BLAST of Cp4.1LG01g19920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQB8_CUCSA1.8e-3184.52Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1[more]
A0A067KMY8_JATCU4.4e-3080.95Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1[more]
G7K1Y2_MEDTR9.8e-3080.95EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE... [more]
A0A0K9RB15_SPIOL9.8e-3082.93Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093360 PE=4 SV=1[more]
A0A0M3TIL4_SALKA1.3e-2981.71Polcalcin OS=Salsola kali PE=2 SV=1[more]
BLAST of Cp4.1LG01g19920 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17480.13.3e-2976.54 pollen calcium-binding protein 1[more]
AT3G03430.13.3e-2971.60 Calcium-binding EF-hand family protein[more]
AT1G73630.13.1e-1146.27 EF hand calcium-binding protein family[more]
AT1G24620.12.6e-1051.79 EF hand calcium-binding protein family[more]
AT3G51920.13.4e-1046.67 calmodulin 9[more]
BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121144|ref|XP_008460520.1|2.0e-3184.52PREDICTED: polcalcin Ole e 3 [Cucumis melo][more]
gi|449445084|ref|XP_004140303.1|2.6e-3184.52PREDICTED: polcalcin Ole e 3 [Cucumis sativus][more]
gi|1009126557|ref|XP_015880220.1|7.4e-3183.33PREDICTED: polcalcin Bet v 4 [Ziziphus jujuba][more]
gi|802634001|ref|XP_012077783.1|6.3e-3080.95PREDICTED: polcalcin Che a 3-like [Jatropha curcas][more]
gi|902208554|gb|KNA15982.1|1.4e-2982.93hypothetical protein SOVF_093360 [Spinacia oleracea][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0012505 endomembrane system
cellular_component GO:0016020 membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g19920.1Cp4.1LG01g19920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 13..69
score: 6.0
IPR002048EF-hand domainSMARTSM00054efh_1coord: 10..38
score: 0.077coord: 45..73
score: 2.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 6..41
score: 13.286coord: 44..76
score: 11
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 11..72
score: 3.1
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 13..70
score: 3.07
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 54..66
score: -coord: 19..31
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 12..69
score: 7.3
NoneNo IPR availablePANTHERPTHR10891:SF605CALCIUM-BINDING PROTEIN CML25-RELATEDcoord: 12..69
score: 7.3