CmoCh04G023980 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G023980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium binding protein
Location	Cmo_Chr04 : 17868103 .. 17868357 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGATGATGCTCAAGACAAAGCTGACCGTGACCGTATATTCAAGCGTTTTGATACCAATGGTGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATAGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

mRNA sequence

ATGTCTGATGATGCTCAAGACAAAGCTGACCGTGACCGTATATTCAAGCGTTTTGATACCAATGGTGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATAGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

Coding sequence (CDS)

ATGTCTGATGATGCTCAAGACAAAGCTGACCGTGACCGTATATTCAAGCGTTTTGATACCAATGGTGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATAGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

Homology

[Close]

BLAST of CmoCh04G023980 vs. Swiss-Prot
Match: POLC3_CHEAL (Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-31
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 1


Query: 3  DDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD ADR+RIFKRFDTNGDGKISS+ELG++LKTLGSVT DEV RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 YEEFTNFALANRGLVKDVAKIF 85
          ++EFT+FA ANRGLVKDV+KIF
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]

BLAST of CmoCh04G023980 vs. Swiss-Prot
Match: ALL3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.3e-31
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD Q+ A+ +RIFKRFD NGDGKISS+ELGE+LKTLGSVT +E+ RMMAEIDTDGDGF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          IS+EEFT FA ANRGLVKDVAKIF
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh04G023980 vs. Swiss-Prot
Match: POLC1_TOBAC (Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-30
Identity = 65/84 (77.38%), Postives = 74/84 (88.10%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD ADR+RIFKRFD NGDGKISS ELGE+LK LGSVT++EV  MMAE+DTDGDGF
Sbjct: 1  MAEDPQDIADRERIFKRFDLNGDGKISSAELGETLKMLGSVTSEEVQHMMAELDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEF  FA ANRGL+KDVAK+F
Sbjct: 61 ISYEEFEEFARANRGLIKDVAKVF 84

[Close]

BLAST of CmoCh04G023980 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.7e-30
Identity = 66/85 (77.65%), Postives = 76/85 (89.41%), Query Frame = 1


Query: 1  MSDD-AQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDG 60
          M+DD  QDKA+R+RIFKRFD NGDGKIS+ ELGE+LKTLGS+T DEV  MMAEIDTDGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTNFALANRGLVKDVAKIF 85
          FIS++EFT+F  ANRGL+KDVAKIF
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of CmoCh04G023980 vs. Swiss-Prot
Match: POLC4_ALNGL (Polcalcin Aln g 4 OS=Alnus glutinosa PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-29
Identity = 66/85 (77.65%), Postives = 76/85 (89.41%), Query Frame = 1


Query: 1  MSDD-AQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDG 60
          M+DD  QD+A+ +RIFK FD NGDGKIS++ELG++LKTLGSVT DEV  MMAEIDTDGDG
Sbjct: 1  MADDHPQDQAEHERIFKCFDANGDGKISASELGDALKTLGSVTPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTNFALANRGLVKDVAKIF 85
          FIS++EFTNFA ANRGLVKDVAKIF
Sbjct: 61 FISFQEFTNFARANRGLVKDVAKIF 85

[Close]

BLAST of CmoCh04G023980 vs. TrEMBL
Match: A0A0A0KQB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 8.0e-32
Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+A+R+RIFKRFD NGDGKISS ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEFT+FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh04G023980 vs. TrEMBL
Match: A0A067KMY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.0e-30
Identity = 69/84 (82.14%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDAQD ADR+RIFKRFD NGDGKIS+ ELG+ LKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT+FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of CmoCh04G023980 vs. TrEMBL
Match: G7K1Y2_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.4e-30
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD ADR+RIFKRFD NGDGKISS ELGE+L+TLGSVT DEV RMM EIDTDGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT FA ANRGLVKDVAKIF
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh04G023980 vs. TrEMBL
Match: A0A0K9RB15_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093360 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.7e-30
Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = 1


Query: 3  DDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD ADR+RIFKRFDTNGDGKISS+ELGE+LKTLGSVT+DEV RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGEALKTLGSVTSDEVCRMMAEIDTDGDGFIS 64

Query: 63 YEEFTNFALANRGLVKDVAKIF 85
          ++EFT+FA ANRGL+KDVAKIF
Sbjct: 65 FDEFTDFARANRGLIKDVAKIF 86

[Close]

BLAST of CmoCh04G023980 vs. TrEMBL
Match: A0A0M3TIL4_SALKA (Polcalcin OS=Salsola kali PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 7.5e-30
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 1


Query: 3  DDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD ADR+RIFKRFDTNGDGKISS+ELG++LKTLGSVT+DE+ RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDLADRERIFKRFDTNGDGKISSSELGDALKTLGSVTSDEIVRMMAEIDTDGDGFIS 64

Query: 63 YEEFTNFALANRGLVKDVAKIF 85
          +EEFT FA ANRGL+KDVAKIF
Sbjct: 65 FEEFTEFARANRGLIKDVAKIF 86

[Close]

BLAST of CmoCh04G023980 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-29
Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 4  DAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +KA+ DRIFK+FD NGDGKIS+ EL E+LKTLGSVT D+V RMMAEIDTDGDG ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISY 62

Query: 64 EEFTNFALANRGLVKDVAKIF 85
          +EFT+FA ANRGL+KDVAKIF
Sbjct: 63 QEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of CmoCh04G023980 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-29
Identity = 59/81 (72.84%), Postives = 73/81 (90.12%), Query Frame = 1


Query: 4  DAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +KA+ DRIFK+FD NGDGKIS+ ELG++LK LGSVT++++ RMMAEIDTDGDG+ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTNFALANRGLVKDVAKIF 85
          +EF +FA ANRGL+KDVAKIF
Sbjct: 63 QEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of CmoCh04G023980 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-11
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 1


Query: 13 RIFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEFTNFAL 72
          ++F +FD NGDGKIS +ELG   K++G S T +E++R++ EID D DGFI+ EEF     
Sbjct: 23 KVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICR 82

Query: 73 ANRGLVK 79
          ++   V+
Sbjct: 83 SSSSAVE 89

[Close]

BLAST of CmoCh04G023980 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-10
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 1


Query: 12 DRIFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEF 67
          + +FK+FD NGDGKISS ELG  + +LG  V  +E+ + + EID  GDG+I++EEF
Sbjct: 39 EAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEF 94

[Close]

BLAST of CmoCh04G023980 vs. TAIR10
Match: AT3G51920.1 (AT3G51920.1 calmodulin 9)

HSP 1 Score: 60.8 bits (146), Expect = 4.5e-10
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 1


Query: 14  IFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEFTNFALA 73
           +F+ FD +GDG IS  ELGE +K +G  +T +E   M+ E D DGDGF+S+ EF+   +A
Sbjct: 89  VFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFSKMMIA 148

[Close]

BLAST of CmoCh04G023980 vs. NCBI nr
Match: gi|659121144|ref|XP_008460520.1| (PREDICTED: polcalcin Ole e 3 [Cucumis melo])

HSP 1 Score: 144.4 bits (363), Expect = 8.8e-32
Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+A+R+RIFKRFD NGDGKISS+ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSSELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEFT+FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh04G023980 vs. NCBI nr
Match: gi|449445084|ref|XP_004140303.1| (PREDICTED: polcalcin Ole e 3 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-31
Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+A+R+RIFKRFD NGDGKISS ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEFT+FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh04G023980 vs. NCBI nr
Match: gi|1009126557|ref|XP_015880220.1| (PREDICTED: polcalcin Bet v 4 [Ziziphus jujuba])

HSP 1 Score: 141.4 bits (355), Expect = 7.4e-31
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD +DK +RDRIFKRFD+NGDGKISS ELGESLK LGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPKDKEERDRIFKRFDSNGDGKISSQELGESLKALGSVTADEVSRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT+FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFACANRGLIKDVAKIF 84

[Close]

BLAST of CmoCh04G023980 vs. NCBI nr
Match: gi|802634001|ref|XP_012077783.1| (PREDICTED: polcalcin Che a 3-like [Jatropha curcas])

HSP 1 Score: 139.4 bits (350), Expect = 2.8e-30
Identity = 69/84 (82.14%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDAQD ADR+RIFKRFD NGDGKIS+ ELG+ LKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT+FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of CmoCh04G023980 vs. NCBI nr
Match: gi|357492167|ref|XP_003616372.1| (EF hand calcium-binding family protein [Medicago truncatula])

HSP 1 Score: 138.3 bits (347), Expect = 6.3e-30
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 1


Query: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD ADR+RIFKRFD NGDGKISS ELGE+L+TLGSVT DEV RMM EIDTDGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISY+EFT FA ANRGLVKDVAKIF
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

The following BLAST results are available for this feature:

BLAST of CmoCh04G023980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLC3_CHEAL	2.0e-31	82.93	Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1	[more]
ALL3_OLEEU	4.3e-31	79.76	Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1	[more]
POLC1_TOBAC	1.3e-30	77.38	Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1	[more]
POLC4_BETPN	3.7e-30	77.65	Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1	[more]
POLC4_ALNGL	1.8e-29	77.65	Polcalcin Aln g 4 OS=Alnus glutinosa PE=1 SV=1	[more]

BLAST of CmoCh04G023980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQB8_CUCSA	8.0e-32	85.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1	[more]
A0A067KMY8_JATCU	2.0e-30	82.14	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1	[more]
G7K1Y2_MEDTR	4.4e-30	82.14	EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE...	[more]
A0A0K9RB15_SPIOL	5.7e-30	84.15	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093360 PE=4 SV=1	[more]
A0A0M3TIL4_SALKA	7.5e-30	82.93	Polcalcin OS=Salsola kali PE=2 SV=1	[more]

BLAST of CmoCh04G023980 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17480.1	1.5e-29	77.78	pollen calcium-binding protein 1	[more]
AT3G03430.1	1.5e-29	72.84	Calcium-binding EF-hand family protein	[more]
AT1G73630.1	3.1e-11	46.27	EF hand calcium-binding protein family	[more]
AT1G24620.1	2.6e-10	51.79	EF hand calcium-binding protein family	[more]
AT3G51920.1	4.5e-10	46.67	calmodulin 9	[more]

BLAST of CmoCh04G023980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121144\|ref\|XP_008460520.1\|	8.8e-32	85.71	PREDICTED: polcalcin Ole e 3 [Cucumis melo]	[more]
gi\|449445084\|ref\|XP_004140303.1\|	1.1e-31	85.71	PREDICTED: polcalcin Ole e 3 [Cucumis sativus]	[more]
gi\|1009126557\|ref\|XP_015880220.1\|	7.4e-31	83.33	PREDICTED: polcalcin Bet v 4 [Ziziphus jujuba]	[more]
gi\|802634001\|ref\|XP_012077783.1\|	2.8e-30	82.14	PREDICTED: polcalcin Che a 3-like [Jatropha curcas]	[more]
gi\|357492167\|ref\|XP_003616372.1\|	6.3e-30	82.14	EF hand calcium-binding family protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016020	membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G023980.1	CmoCh04G023980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 13..69 score: 4.9
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 10..38 score: 0.077coord: 45..73 score: 2.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 6..41 score: 14.011coord: 44..76 score: 11
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 7..72 score: 1.4
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 13..70 score: 2.37
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66 score: -coord: 19..31 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 12..69 score: 7.3
None	No IPR available	PANTHER	PTHR10891:SF605	CALCIUM-BINDING PROTEIN CML25-RELATED	coord: 12..69 score: 7.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G023980	Cucsa.006310	Cucumber (Gy14) v1	cgycmoB0116
CmoCh04G023980	CmaCh15G007420	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G023980	CmaCh04G022940	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G023980	Cla019760	Watermelon (97103) v1	cmowmB667
CmoCh04G023980	Csa5G420320	Cucumber (Chinese Long) v2	cmocuB740
CmoCh04G023980	MELO3C022853	Melon (DHL92) v3.5.1	cmomeB626
CmoCh04G023980	ClCG03G008650	Watermelon (Charleston Gray)	cmowcgB647
CmoCh04G023980	CSPI05G15000	Wild cucumber (PI 183967)	cmocpiB749
CmoCh04G023980	Lsi09G009300	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G023980	Cp4.1LG13g05230	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G023980	Cp4.1LG01g19920	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G023980	MELO3C022853.2	Melon (DHL92) v3.6.1	cmomedB715
CmoCh04G023980	CsaV3_5G024070	Cucumber (Chinese Long) v3	cmocucB0876
CmoCh04G023980	Cla97C03G059900	Watermelon (97103) v2	cmowmbB719
CmoCh04G023980	CsGy5G014870	Cucumber (Gy14) v2	cgybcmoB654
CmoCh04G023980	Carg18269	Silver-seed gourd	carcmoB0716

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G023980	CmoCh15G007660	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G023980	Wax gourd	cmowgoB0822
CmoCh04G023980	Silver-seed gourd	carcmoB1121