CSPI05G15000 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G15000
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Calcium binding protein
Location	Chr5 : 15789063 .. 15789317 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGACCGCATTTTCAAGCGCTTTGACGCCAATGGCGACGGTAAGATCTCTTCCGCTGAGCTTGGGGAAGCCTTGAAGACCCTCGGCTCCGTCACCGCCGACGAAGTACAACGGATGATGGCTGAGATCGACACTGACGGTGATGGCTTCATTTCGTACGAAGAGTTCACAGATTTCGCTCGTGCTAACCGTGGATTAGTCAAGGATGTTGCTAAGATATTCTAA

mRNA sequence

ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGACCGCATTTTCAAGCGCTTTGACGCCAATGGCGACGGTAAGATCTCTTCCGCTGAGCTTGGGGAAGCCTTGAAGACCCTCGGCTCCGTCACCGCCGACGAAGTACAACGGATGATGGCTGAGATCGACACTGACGGTGATGGCTTCATTTCGTACGAAGAGTTCACAGATTTCGCTCGTGCTAACCGTGGATTAGTCAAGGATGTTGCTAAGATATTCTAA

Coding sequence (CDS)

ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGACCGCATTTTCAAGCGCTTTGACGCCAATGGCGACGGTAAGATCTCTTCCGCTGAGCTTGGGGAAGCCTTGAAGACCCTCGGCTCCGTCACCGCCGACGAAGTACAACGGATGATGGCTGAGATCGACACTGACGGTGATGGCTTCATTTCGTACGAAGAGTTCACAGATTTCGCTCGTGCTAACCGTGGATTAGTCAAGGATGTTGCTAAGATATTCTAA

Homology

[Close]

BLAST of CSPI05G15000 vs. Swiss-Prot
Match: ALL3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.6e-35
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQ+ AE +RIFKRFDANGDGKISS+ELGE LKTLGSVT +E+QRMMAEIDTDGDGF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          IS+EEFT FARANRGLVKDVAKIF
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.1e-34
Identity = 73/85 (85.88%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 1  MADD-PQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDG 60
          MADD PQD+AER+RIFKRFDANGDGKIS+AELGEALKTLGS+T DEV+ MMAEIDTDGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTDFARANRGLVKDVAKIF 85
          FIS++EFTDF RANRGL+KDVAKIF
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of CSPI05G15000 vs. Swiss-Prot
Match: POLC1_TOBAC (Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 9.5e-34
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MA+DPQD A+R+RIFKRFD NGDGKISSAELGE LK LGSVT++EVQ MMAE+DTDGDGF
Sbjct: 1  MAEDPQDIADRERIFKRFDLNGDGKISSAELGETLKMLGSVTSEEVQHMMAELDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEF +FARANRGL+KDVAK+F
Sbjct: 61 ISYEEFEEFARANRGLIKDVAKVF 84

[Close]

BLAST of CSPI05G15000 vs. Swiss-Prot
Match: POLC3_CHEAL (Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-33
Identity = 70/82 (85.37%), Postives = 78/82 (95.12%), Query Frame = 1


Query: 3  DDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFIS 62
          D PQD A+R+RIFKRFD NGDGKISS+ELG+ALKTLGSVT DEV+RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 YEEFTDFARANRGLVKDVAKIF 85
          ++EFTDFARANRGLVKDV+KIF
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]

BLAST of CSPI05G15000 vs. Swiss-Prot
Match: POLC4_ALNGL (Polcalcin Aln g 4 OS=Alnus glutinosa PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.8e-33
Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = 1


Query: 1  MADD-PQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDG 60
          MADD PQDQAE +RIFK FDANGDGKIS++ELG+ALKTLGSVT DEV+ MMAEIDTDGDG
Sbjct: 1  MADDHPQDQAEHERIFKCFDANGDGKISASELGDALKTLGSVTPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTDFARANRGLVKDVAKIF 85
          FIS++EFT+FARANRGLVKDVAKIF
Sbjct: 61 FISFQEFTNFARANRGLVKDVAKIF 85

[Close]

BLAST of CSPI05G15000 vs. TrEMBL
Match: A0A0A0KQB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-38
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQDQAER+RIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFTDFARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. TrEMBL
Match: I3ST68_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-33
Identity = 75/84 (89.29%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQD A+R+RIFKRFDANGDG+ISS+ELGEALKTLGSVTA+EVQRMM EID DGDGF
Sbjct: 1  MADDPQDVADRERIFKRFDANGDGQISSSELGEALKTLGSVTAEEVQRMMDEIDIDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFT FARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTSFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. TrEMBL
Match: G7K1Y2_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.9e-33
Identity = 73/84 (86.90%), Postives = 81/84 (96.43%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MA+DPQD A+R+RIFKRFDANGDGKISSAELGEAL+TLGSVT DEV+RMM EIDTDGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISY+EFT+FA+ANRGLVKDVAKIF
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. TrEMBL
Match: A0A151U189_CAJCA (Polcalcin Ole e 3 OS=Cajanus cajan GN=KK1_005654 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.9e-33
Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQD A+R+RIFK FDANGDG+ISSAELGEALK LGSVT DEVQRMM EIDTDGDG+
Sbjct: 1  MADDPQDVADRERIFKHFDANGDGQISSAELGEALKALGSVTPDEVQRMMEEIDTDGDGY 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFT+FARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTEFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. TrEMBL
Match: W8PPL7_FRAEX (Fra e 3.01 allergen OS=Fraxinus excelsior PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.9e-33
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQ+ A+ +RIFKR DANGDGKISS+ELGE LKTLGS+T DE+QRMMAEIDTDGDGF
Sbjct: 1  MADDPQEVAQLERIFKRLDANGDGKISSSELGETLKTLGSITPDEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFTDFARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 134.0 bits (336), Expect = 4.2e-32
Identity = 67/81 (82.72%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 4  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISY 63
          D  ++AE DRIFK+FDANGDGKIS+AEL EALKTLGSVTAD+V+RMMAEIDTDGDG ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISY 62

Query: 64 EEFTDFARANRGLVKDVAKIF 85
          +EFTDFA ANRGL+KDVAKIF
Sbjct: 63 QEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of CSPI05G15000 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 130.2 bits (326), Expect = 6.1e-31
Identity = 62/81 (76.54%), Postives = 74/81 (91.36%), Query Frame = 1


Query: 4  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGFISY 63
          D  ++AE DRIFK+FDANGDGKIS+AELG+ALK LGSVT ++++RMMAEIDTDGDG+ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTDFARANRGLVKDVAKIF 85
          +EF DFA ANRGL+KDVAKIF
Sbjct: 63 QEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of CSPI05G15000 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 70.1 bits (170), Expect = 7.5e-13
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 1


Query: 5  PQDQAERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISY 64
          P    E  ++F +FDANGDGKIS +ELG   K++G S T +E+ R++ EID D DGFI+ 
Sbjct: 15 PSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQ 74

Query: 65 EEFTDFARANRGLVK 79
          EEF    R++   V+
Sbjct: 75 EEFATICRSSSSAVE 89

[Close]

BLAST of CSPI05G15000 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 64.3 bits (155), Expect = 4.1e-11
Identity = 30/60 (50.00%), Postives = 44/60 (73.33%), Query Frame = 1


Query: 10 ERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTD 69
          E + +FK+FD NGDGKISS ELG  + +LG  V  +E+++ + EID  GDG+I++EEF +
Sbjct: 37 ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

[Close]

BLAST of CSPI05G15000 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-10
Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 1


Query: 4  DPQDQAERDRIFKRFDANGDGKISSAELGEALKTLG-SVTADEVQRMMAEIDTDGDGFIS 63
          D  +  E  ++F +FD+NGDGKIS  ELG   K +G S T  E+ R++ E+DTD DG+I+
Sbjct: 17 DMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYIN 76

Query: 64 YEEFTDFARAN 74
           +EF+   R++
Sbjct: 77 LDEFSTLCRSS 87

[Close]

BLAST of CSPI05G15000 vs. NCBI nr
Match: gi|449445084|ref|XP_004140303.1| (PREDICTED: polcalcin Ole e 3 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 4.9e-38
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQDQAER+RIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFTDFARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. NCBI nr
Match: gi|659121144|ref|XP_008460520.1| (PREDICTED: polcalcin Ole e 3 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-37
Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQDQAER+RIFKRFDANGDGKISS+ELGEALKTLGSVTADEVQRMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSSELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFTDFARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. NCBI nr
Match: gi|388510788|gb|AFK43460.1| (unknown [Lotus japonicus])

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-33
Identity = 75/84 (89.29%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQD A+R+RIFKRFDANGDG+ISS+ELGEALKTLGSVTA+EVQRMM EID DGDGF
Sbjct: 1  MADDPQDVADRERIFKRFDANGDGQISSSELGEALKTLGSVTAEEVQRMMDEIDIDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFT FARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTSFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. NCBI nr
Match: gi|589912891|gb|AHL24661.1| (Fra e 3.01 allergen [Fraxinus excelsior])

HSP 1 Score: 149.4 bits (376), Expect = 2.8e-33
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQ+ A+ +RIFKR DANGDGKISS+ELGE LKTLGS+T DE+QRMMAEIDTDGDGF
Sbjct: 1  MADDPQEVAQLERIFKRLDANGDGKISSSELGETLKTLGSITPDEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFTDFARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CSPI05G15000 vs. NCBI nr
Match: gi|1012361862|gb|KYP73045.1| (Polcalcin Ole e 3 [Cajanus cajan])

HSP 1 Score: 149.4 bits (376), Expect = 2.8e-33
Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDPQDQAERDRIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60
          MADDPQD A+R+RIFK FDANGDG+ISSAELGEALK LGSVT DEVQRMM EIDTDGDG+
Sbjct: 1  MADDPQDVADRERIFKHFDANGDGQISSAELGEALKALGSVTPDEVQRMMEEIDTDGDGY 60

Query: 61 ISYEEFTDFARANRGLVKDVAKIF 85
          ISYEEFT+FARANRGLVKDVAKIF
Sbjct: 61 ISYEEFTEFARANRGLVKDVAKIF 84

The following BLAST results are available for this feature:

BLAST of CSPI05G15000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALL3_OLEEU	6.6e-35	86.90	Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1	[more]
POLC4_BETPN	1.1e-34	85.88	Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1	[more]
POLC1_TOBAC	9.5e-34	82.14	Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1	[more]
POLC3_CHEAL	1.2e-33	85.37	Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1	[more]
POLC4_ALNGL	2.8e-33	84.71	Polcalcin Aln g 4 OS=Alnus glutinosa PE=1 SV=1	[more]

BLAST of CSPI05G15000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQB8_CUCSA	3.4e-38	98.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1	[more]
I3ST68_LOTJA	1.1e-33	89.29	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
G7K1Y2_MEDTR	1.9e-33	86.90	EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE...	[more]
A0A151U189_CAJCA	1.9e-33	88.10	Polcalcin Ole e 3 OS=Cajanus cajan GN=KK1_005654 PE=4 SV=1	[more]
W8PPL7_FRAEX	1.9e-33	86.90	Fra e 3.01 allergen OS=Fraxinus excelsior PE=2 SV=1	[more]

BLAST of CSPI05G15000 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17480.1	4.2e-32	82.72	pollen calcium-binding protein 1	[more]
AT3G03430.1	6.1e-31	76.54	Calcium-binding EF-hand family protein	[more]
AT1G73630.1	7.5e-13	46.67	EF hand calcium-binding protein family	[more]
AT1G24620.1	4.1e-11	50.00	EF hand calcium-binding protein family	[more]
AT1G18210.1	1.2e-10	43.66	Calcium-binding EF-hand family protein	[more]

BLAST of CSPI05G15000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445084\|ref\|XP_004140303.1\|	4.9e-38	98.81	PREDICTED: polcalcin Ole e 3 [Cucumis sativus]	[more]
gi\|659121144\|ref\|XP_008460520.1\|	1.1e-37	97.62	PREDICTED: polcalcin Ole e 3 [Cucumis melo]	[more]
gi\|388510788\|gb\|AFK43460.1\|	1.6e-33	89.29	unknown [Lotus japonicus]	[more]
gi\|589912891\|gb\|AHL24661.1\|	2.8e-33	86.90	Fra e 3.01 allergen [Fraxinus excelsior]	[more]
gi\|1012361862\|gb\|KYP73045.1\|	2.8e-33	88.10	Polcalcin Ole e 3 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016020	membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G15000.1	CSPI05G15000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 13..70 score: 5.6
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 45..73 score: 2.2E-6coord: 10..38 score: 1.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 44..76 score: 12.672coord: 6..41 score: 14
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 7..73 score: 3.1
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 11..70 score: 1.19
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66 score: -coord: 19..31 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 10..69 score: 8.9
None	No IPR available	PANTHER	PTHR10891:SF605	CALCIUM-BINDING PROTEIN CML25-RELATED	coord: 10..69 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G15000	Cla019760	Watermelon (97103) v1	cpiwmB391
CSPI05G15000	Csa5G420320	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G15000	MELO3C022853	Melon (DHL92) v3.5.1	cpimeB343
CSPI05G15000	ClCG03G008650	Watermelon (Charleston Gray)	cpiwcgB401
CSPI05G15000	Lsi09G009300	Bottle gourd (USVL1VR-Ls)	cpilsiB330
CSPI05G15000	MELO3C022853.2	Melon (DHL92) v3.6.1	cpimedB332
CSPI05G15000	CsaV3_5G024070	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G15000	Cla97C03G059900	Watermelon (97103) v2	cpiwmbB389
CSPI05G15000	Bhi12G001069	Wax gourd	cpiwgoB455
CSPI05G15000	Cucsa.006310	Cucumber (Gy14) v1	cgycpiB070
CSPI05G15000	CmaCh04G022940	Cucurbita maxima (Rimu)	cmacpiB759
CSPI05G15000	CmaCh15G007420	Cucurbita maxima (Rimu)	cmacpiB297
CSPI05G15000	CmoCh15G007660	Cucurbita moschata (Rifu)	cmocpiB289
CSPI05G15000	CmoCh04G023980	Cucurbita moschata (Rifu)	cmocpiB749
CSPI05G15000	Cp4.1LG01g19920	Cucurbita pepo (Zucchini)	cpecpiB441
CSPI05G15000	Cp4.1LG13g05230	Cucurbita pepo (Zucchini)	cpecpiB188
CSPI05G15000	CsGy5G014870	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G15000	Carg18269	Silver-seed gourd	carcpiB0562

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G15000	Silver-seed gourd	carcpiB0865