CmaCh04G022940 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G022940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Calcium binding protein
Location	Cma_Chr04 : 16002386 .. 16002640 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGATGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCTGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAGTTTCGCTCTTGCCAACCGTGGATTAGTCAAGGATGTTGCAAAGATTTTCTAG

mRNA sequence

ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGATGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCTGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAGTTTCGCTCTTGCCAACCGTGGATTAGTCAAGGATGTTGCAAAGATTTTCTAG

Coding sequence (CDS)

ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGATGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCTGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAGTTTCGCTCTTGCCAACCGTGGATTAGTCAAGGATGTTGCAAAGATTTTCTAG

Protein sequence

MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISYEEFTSFALANRGLVKDVAKIF

Homology

[Close]

BLAST of CmaCh04G022940 vs. Swiss-Prot
Match: POLC3_CHEAL (Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.7e-31
Identity = 67/82 (81.71%), Postives = 74/82 (90.24%), Query Frame = 1


Query: 3  DDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD  DR+RIFKRFDTNGDGKISS+ELG++LKTLGSVT DEV RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 YEEFTSFALANRGLVKDVAKIF 85
          ++EFT FA ANRGLVKDV+KIF
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]

BLAST of CmaCh04G022940 vs. Swiss-Prot
Match: ALL3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 7.4e-31
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD Q+  + +RIFKRFD NGDGKISS+ELGE+LKTLGSVT +E+ RMMAEIDTDGDGF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          IS+EEFT FA ANRGLVKDVAKIF
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. Swiss-Prot
Match: POLC1_TOBAC (Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.8e-30
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD  DR+RIFKRFD NGDGKISS ELGE+LK LGSVT++EV  MMAE+DTDGDGF
Sbjct: 1  MAEDPQDIADRERIFKRFDLNGDGKISSAELGETLKMLGSVTSEEVQHMMAELDTDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISYEEF  FA ANRGL+KDVAK+F
Sbjct: 61 ISYEEFEEFARANRGLIKDVAKVF 84

[Close]

BLAST of CmaCh04G022940 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-29
Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = 1


Query: 1  MSDD-AQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDG 60
          M+DD  QDK +R+RIFKRFD NGDGKIS+ ELGE+LKTLGS+T DEV  MMAEIDTDGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTSFALANRGLVKDVAKIF 85
          FIS++EFT F  ANRGL+KDVAKIF
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of CmaCh04G022940 vs. Swiss-Prot
Match: POLC2_BRACM (Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-28
Identity = 59/81 (72.84%), Postives = 73/81 (90.12%), Query Frame = 1


Query: 4  DAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +K + DRIFK+FD NGDGKIS++ELG++LK LGSVT+D++ RMMAEIDTDGDG+ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTSFALANRGLVKDVAKIF 85
          +EF+ FA ANRGL+KDVAKIF
Sbjct: 63 QEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh04G022940 vs. TrEMBL
Match: A0A0A0KQB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.3e-31
Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+ +R+RIFKRFD NGDGKISS ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISYEEFT FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. TrEMBL
Match: A0A067KMY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.7e-30
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDAQD  DR+RIFKRFD NGDGKIS+ ELG+ LKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISY+EFT FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. TrEMBL
Match: G7K1Y2_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 9.8e-30
Identity = 68/84 (80.95%), Postives = 74/84 (88.10%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD  DR+RIFKRFD NGDGKISS ELGE+L+TLGSVT DEV RMM EIDTDGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISY+EFT FA ANRGLVKDVAKIF
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. TrEMBL
Match: I3ST68_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 9.8e-30
Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD  DR+RIFKRFD NGDG+ISS+ELGE+LKTLGSVT +EV RMM EID DGDGF
Sbjct: 1  MADDPQDVADRERIFKRFDANGDGQISSSELGEALKTLGSVTAEEVQRMMDEIDIDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISYEEFTSFA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTSFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. TrEMBL
Match: A0A0M3TIL4_SALKA (Polcalcin OS=Salsola kali PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-29
Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 1


Query: 3  DDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD  DR+RIFKRFDTNGDGKISS+ELG++LKTLGSVT+DE+ RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDLADRERIFKRFDTNGDGKISSSELGDALKTLGSVTSDEIVRMMAEIDTDGDGFIS 64

Query: 63 YEEFTSFALANRGLVKDVAKIF 85
          +EEFT FA ANRGL+KDVAKIF
Sbjct: 65 FEEFTEFARANRGLIKDVAKIF 86

[Close]

BLAST of CmaCh04G022940 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 124.0 bits (310), Expect = 4.3e-29
Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 1


Query: 4  DAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +K + DRIFK+FD NGDGKIS+ EL E+LKTLGSVT D+V RMMAEIDTDGDG ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISY 62

Query: 64 EEFTSFALANRGLVKDVAKIF 85
          +EFT FA ANRGL+KDVAKIF
Sbjct: 63 QEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh04G022940 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 124.0 bits (310), Expect = 4.3e-29
Identity = 58/81 (71.60%), Postives = 71/81 (87.65%), Query Frame = 1


Query: 4  DAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +K + DRIFK+FD NGDGKIS+ ELG++LK LGSVT++++ RMMAEIDTDGDG+ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTSFALANRGLVKDVAKIF 85
          +EF  FA ANRGL+KDVAKIF
Sbjct: 63 QEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh04G022940 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 65.1 bits (157), Expect = 2.4e-11
Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 1


Query: 13 RIFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEFTSFAL 72
          ++F +FD NGDGKIS +ELG   K++G S T +E++R++ EID D DGFI+ EEF +   
Sbjct: 23 KVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICR 82

Query: 73 ANRGLVK 79
          ++   V+
Sbjct: 83 SSSSAVE 89

[Close]

BLAST of CmaCh04G022940 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-10
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 1


Query: 12 DRIFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEF 67
          + +FK+FD NGDGKISS ELG  + +LG  V  +E+ + + EID  GDG+I++EEF
Sbjct: 39 EAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEF 94

[Close]

BLAST of CmaCh04G022940 vs. TAIR10
Match: AT3G51920.1 (AT3G51920.1 calmodulin 9)

HSP 1 Score: 60.8 bits (146), Expect = 4.5e-10
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 1


Query: 14  IFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEFTSFALA 73
           +F+ FD +GDG IS  ELGE +K +G  +T +E   M+ E D DGDGF+S+ EF+   +A
Sbjct: 89  VFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFSKMMIA 148

[Close]

BLAST of CmaCh04G022940 vs. NCBI nr
Match: gi|659121144|ref|XP_008460520.1| (PREDICTED: polcalcin Ole e 3 [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 2.6e-31
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+ +R+RIFKRFD NGDGKISS+ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSSELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISYEEFT FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. NCBI nr
Match: gi|449445084|ref|XP_004140303.1| (PREDICTED: polcalcin Ole e 3 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 3.3e-31
Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QD+ +R+RIFKRFD NGDGKISS ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISYEEFT FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. NCBI nr
Match: gi|1009126557|ref|XP_015880220.1| (PREDICTED: polcalcin Bet v 4 [Ziziphus jujuba])

HSP 1 Score: 141.0 bits (354), Expect = 9.7e-31
Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD +DK +RDRIFKRFD+NGDGKISS ELGESLK LGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPKDKEERDRIFKRFDSNGDGKISSQELGESLKALGSVTADEVSRMMAEIDTDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISY+EFT FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFACANRGLIKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. NCBI nr
Match: gi|802634001|ref|XP_012077783.1| (PREDICTED: polcalcin Che a 3-like [Jatropha curcas])

HSP 1 Score: 137.9 bits (346), Expect = 8.2e-30
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDAQD  DR+RIFKRFD NGDGKIS+ ELG+ LKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISY+EFT FA ANRGL+KDVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of CmaCh04G022940 vs. NCBI nr
Match: gi|357492167|ref|XP_003616372.1| (EF hand calcium-binding family protein [Medicago truncatula])

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-29
Identity = 68/84 (80.95%), Postives = 74/84 (88.10%), Query Frame = 1


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD  DR+RIFKRFD NGDGKISS ELGE+L+TLGSVT DEV RMM EIDTDGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISYEEFTSFALANRGLVKDVAKIF 85
          ISY+EFT FA ANRGLVKDVAKIF
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

The following BLAST results are available for this feature:

BLAST of CmaCh04G022940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLC3_CHEAL	5.7e-31	81.71	Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1	[more]
ALL3_OLEEU	7.4e-31	78.57	Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1	[more]
POLC1_TOBAC	2.8e-30	76.19	Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1	[more]
POLC4_BETPN	1.1e-29	76.47	Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1	[more]
POLC2_BRACM	1.2e-28	72.84	Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1	[more]

BLAST of CmaCh04G022940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQB8_CUCSA	2.3e-31	84.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1	[more]
A0A067KMY8_JATCU	5.7e-30	80.95	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1	[more]
G7K1Y2_MEDTR	9.8e-30	80.95	EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE...	[more]
I3ST68_LOTJA	9.8e-30	82.14	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A0M3TIL4_SALKA	1.7e-29	81.71	Polcalcin OS=Salsola kali PE=2 SV=1	[more]

BLAST of CmaCh04G022940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17480.1	4.3e-29	76.54	pollen calcium-binding protein 1	[more]
AT3G03430.1	4.3e-29	71.60	Calcium-binding EF-hand family protein	[more]
AT1G73630.1	2.4e-11	46.27	EF hand calcium-binding protein family	[more]
AT1G24620.1	2.6e-10	51.79	EF hand calcium-binding protein family	[more]
AT3G51920.1	4.5e-10	46.67	calmodulin 9	[more]

BLAST of CmaCh04G022940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121144\|ref\|XP_008460520.1\|	2.6e-31	84.52	PREDICTED: polcalcin Ole e 3 [Cucumis melo]	[more]
gi\|449445084\|ref\|XP_004140303.1\|	3.3e-31	84.52	PREDICTED: polcalcin Ole e 3 [Cucumis sativus]	[more]
gi\|1009126557\|ref\|XP_015880220.1\|	9.7e-31	83.33	PREDICTED: polcalcin Bet v 4 [Ziziphus jujuba]	[more]
gi\|802634001\|ref\|XP_012077783.1\|	8.2e-30	80.95	PREDICTED: polcalcin Che a 3-like [Jatropha curcas]	[more]
gi\|357492167\|ref\|XP_003616372.1\|	1.4e-29	80.95	EF hand calcium-binding family protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G022940.1	CmaCh04G022940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 13..69 score: 8.0
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 45..73 score: 3.0E-4coord: 10..38 score: 0
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 44..76 score: 11.222coord: 6..41 score: 13
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 11..71 score: 6.4
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 13..70 score: 4.75
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66 score: -coord: 19..31 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 12..69 score: 1.1
None	No IPR available	PANTHER	PTHR10891:SF605	CALCIUM-BINDING PROTEIN CML25-RELATED	coord: 12..69 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G022940	Cucsa.006310	Cucumber (Gy14) v1	cgycmaB0120
CmaCh04G022940	Cla019760	Watermelon (97103) v1	cmawmB672
CmaCh04G022940	Csa5G420320	Cucumber (Chinese Long) v2	cmacuB750
CmaCh04G022940	MELO3C022853	Melon (DHL92) v3.5.1	cmameB636
CmaCh04G022940	ClCG03G008650	Watermelon (Charleston Gray)	cmawcgB645
CmaCh04G022940	CSPI05G15000	Wild cucumber (PI 183967)	cmacpiB759
CmaCh04G022940	CmoCh04G023980	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G022940	CmoCh15G007660	Cucurbita moschata (Rifu)	cmacmoB693
CmaCh04G022940	Lsi09G009300	Bottle gourd (USVL1VR-Ls)	cmalsiB622
CmaCh04G022940	Cp4.1LG13g05230	Cucurbita pepo (Zucchini)	cmacpeB705
CmaCh04G022940	Cp4.1LG01g19920	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G022940	MELO3C022853.2	Melon (DHL92) v3.6.1	cmamedB722
CmaCh04G022940	CsaV3_5G024070	Cucumber (Chinese Long) v3	cmacucB0887
CmaCh04G022940	Cla97C03G059900	Watermelon (97103) v2	cmawmbB746
CmaCh04G022940	CsGy5G014870	Cucumber (Gy14) v2	cgybcmaB676
CmaCh04G022940	Carg18269	Silver-seed gourd	carcmaB0738

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G022940	CmaCh15G007420	Cucurbita maxima (Rimu)	cmacmaB325

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G022940	Wax gourd	cmawgoB0827
CmaCh04G022940	Silver-seed gourd	carcmaB1150