CmoCh15G007660 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G007660
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium binding protein
Location	Cmo_Chr15 : 3759648 .. 3759902 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATGATGCTAAAGACAAAGTTGACCGAGACCGAATTTTCAAGCGCTTCGACGCCAATGGCGACGGTAGGATCTCTGCGTCGGAGCTCGGTGAATCCTTGAAGACGCTTGGCTCCGTTACCCCTGACGAAGTGCAGCGGATGATGGCAGAGATCGACACCGACGGCGACGGGTACATTTCATACGAAGAGTTCACAGATTTCGCCTGTGCCAACCGTGGTTTAATCAGAGATGTTGCAAAGATATTCTAA

mRNA sequence

ATGGCTGATGATGCTAAAGACAAAGTTGACCGAGACCGAATTTTCAAGCGCTTCGACGCCAATGGCGACGGTAGGATCTCTGCGTCGGAGCTCGGTGAATCCTTGAAGACGCTTGGCTCCGTTACCCCTGACGAAGTGCAGCGGATGATGGCAGAGATCGACACCGACGGCGACGGGTACATTTCATACGAAGAGTTCACAGATTTCGCCTGTGCCAACCGTGGTTTAATCAGAGATGTTGCAAAGATATTCTAA

Coding sequence (CDS)

ATGGCTGATGATGCTAAAGACAAAGTTGACCGAGACCGAATTTTCAAGCGCTTCGACGCCAATGGCGACGGTAGGATCTCTGCGTCGGAGCTCGGTGAATCCTTGAAGACGCTTGGCTCCGTTACCCCTGACGAAGTGCAGCGGATGATGGCAGAGATCGACACCGACGGCGACGGGTACATTTCATACGAAGAGTTCACAGATTTCGCCTGTGCCAACCGTGGTTTAATCAGAGATGTTGCAAAGATATTCTAA

Homology

[Close]

BLAST of CmoCh15G007660 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.8e-32
Identity = 66/85 (77.65%), Postives = 79/85 (92.94%), Query Frame = 1


Query: 1  MADD-AKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDG 60
          MADD  +DK +R+RIFKRFDANGDG+ISA+ELGE+LKTLGS+TPDEV+ MMAEIDTDGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 YISYEEFTDFACANRGLIRDVAKIF 85
          +IS++EFTDF  ANRGL++DVAKIF
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of CmoCh15G007660 vs. Swiss-Prot
Match: ALL3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.8e-32
Identity = 65/84 (77.38%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD ++  + +RIFKRFDANGDG+IS+SELGE+LKTLGSVTP+E+QRMMAEIDTDGDG+
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          IS+EEFT FA ANRGL++DVAKIF
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. Swiss-Prot
Match: POLC3_CHEAL (Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 7.4e-31
Identity = 63/82 (76.83%), Postives = 76/82 (92.68%), Query Frame = 1


Query: 3  DDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYIS 62
          D  +D  DR+RIFKRFD NGDG+IS+SELG++LKTLGSVTPDEV+RMMAEIDTDGDG+IS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 YEEFTDFACANRGLIRDVAKIF 85
          ++EFTDFA ANRGL++DV+KIF
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]

BLAST of CmoCh15G007660 vs. Swiss-Prot
Match: POLC2_BRANA (Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-30
Identity = 62/81 (76.54%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 4  DAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYISY 63
          DA +K + DRIFK+FDANGDG+ISASELG++LK LGSVT D+++RMMAEIDTDGDGYISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTDFACANRGLIRDVAKIF 85
          +EF+DFA ANRGL++DVAKIF
Sbjct: 63 QEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of CmoCh15G007660 vs. Swiss-Prot
Match: POLC2_BRACM (Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-30
Identity = 62/81 (76.54%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 4  DAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYISY 63
          DA +K + DRIFK+FDANGDG+ISASELG++LK LGSVT D+++RMMAEIDTDGDGYISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTDFACANRGLIRDVAKIF 85
          +EF+DFA ANRGL++DVAKIF
Sbjct: 63 QEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of CmoCh15G007660 vs. TrEMBL
Match: A0A067KMY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.1e-32
Identity = 70/84 (83.33%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADDA+D  DR+RIFKRFD NGDG+ISA+ELG+ LKTLGSVTPDEV+RMMAEIDTDGDGY
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISY+EFTDFA ANRGL++DVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. TrEMBL
Match: A0A0A0KQB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 6.1e-32
Identity = 69/84 (82.14%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D+ +R+RIFKRFDANGDG+IS++ELGE+LKTLGSVT DEVQRMMAEIDTDGDG+
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISYEEFTDFA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. TrEMBL
Match: A0A151U189_CAJCA (Polcalcin Ole e 3 OS=Cajanus cajan GN=KK1_005654 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.0e-31
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D  DR+RIFK FDANGDG+IS++ELGE+LK LGSVTPDEVQRMM EIDTDGDGY
Sbjct: 1  MADDPQDVADRERIFKHFDANGDGQISSAELGEALKALGSVTPDEVQRMMEEIDTDGDGY 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISYEEFT+FA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTEFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. TrEMBL
Match: A0A061EH29_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_019206 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-30
Identity = 69/84 (82.14%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1   MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
           MADDA +K +RDRIFKRFDANGDG+ISA+ELG++LKTLGSVT DE+ RMMAEIDTDGDGY
Sbjct: 90  MADDA-EKAERDRIFKRFDANGDGKISAAELGDALKTLGSVTGDEITRMMAEIDTDGDGY 149

Query: 61  ISYEEFTDFACANRGLIRDVAKIF 85
           ISY+EFTDFA ANRGL++DVAKIF
Sbjct: 150 ISYQEFTDFASANRGLMKDVAKIF 172

[Close]

BLAST of CmoCh15G007660 vs. TrEMBL
Match: W8PPL7_FRAEX (Fra e 3.01 allergen OS=Fraxinus excelsior PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.0e-30
Identity = 66/84 (78.57%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD ++    +RIFKR DANGDG+IS+SELGE+LKTLGS+TPDE+QRMMAEIDTDGDG+
Sbjct: 1  MADDPQEVAQLERIFKRLDANGDGKISSSELGETLKTLGSITPDEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISYEEFTDFA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 129.8 bits (325), Expect = 7.9e-31
Identity = 63/81 (77.78%), Postives = 74/81 (91.36%), Query Frame = 1


Query: 4  DAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYISY 63
          DA +K + DRIFK+FDANGDG+ISA+EL E+LKTLGSVT D+V+RMMAEIDTDGDG ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISY 62

Query: 64 EEFTDFACANRGLIRDVAKIF 85
          +EFTDFA ANRGL++DVAKIF
Sbjct: 63 QEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of CmoCh15G007660 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.0e-30
Identity = 60/81 (74.07%), Postives = 74/81 (91.36%), Query Frame = 1


Query: 4  DAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYISY 63
          DA +K + DRIFK+FDANGDG+ISA+ELG++LK LGSVT ++++RMMAEIDTDGDGYISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTDFACANRGLIRDVAKIF 85
          +EF DFA ANRGL++DVAKIF
Sbjct: 63 QEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of CmoCh15G007660 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 63.9 bits (154), Expect = 5.3e-11
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 1


Query: 12 DRIFKRFDANGDGRISASELGESLKTLGSVTP-DEVQRMMAEIDTDGDGYISYEEFTD 69
          + +FK+FD NGDG+IS+ ELG  + +LG   P +E+++ + EID  GDGYI++EEF +
Sbjct: 39 EAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

[Close]

BLAST of CmoCh15G007660 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 63.5 bits (153), Expect = 6.9e-11
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 1


Query: 13 RIFKRFDANGDGRISASELGESLKTLG-SVTPDEVQRMMAEIDTDGDGYISYEEF 67
          ++F +FDANGDG+IS SELG   K++G S T +E+ R++ EID D DG+I+ EEF
Sbjct: 23 KVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEF 77

[Close]

BLAST of CmoCh15G007660 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-10
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 1


Query: 4   DAKDKVDRDRIFKRFDANGDGRISASELGESLKTLG-SVTPDEVQRMMAEIDTDGDGYIS 63
           D  +  +  ++F +FD+NGDG+IS  ELG   K +G S T  E+ R++ E+DTD DGYI+
Sbjct: 17  DMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYIN 76

Query: 64  YEEFTDF--ACANRGLIRDVAKIF 85
            +EF+    + ++   IRD   ++
Sbjct: 77  LDEFSTLCRSSSSAAEIRDAFDLY 100

[Close]

BLAST of CmoCh15G007660 vs. NCBI nr
Match: gi|1009126557|ref|XP_015880220.1| (PREDICTED: polcalcin Bet v 4 [Ziziphus jujuba])

HSP 1 Score: 147.9 bits (372), Expect = 7.9e-33
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD KDK +RDRIFKRFD+NGDG+IS+ ELGESLK LGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDPKDKEERDRIFKRFDSNGDGKISSQELGESLKALGSVTADEVSRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISY+EFTDFACANRGLI+DVAKIF
Sbjct: 61 ISYQEFTDFACANRGLIKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. NCBI nr
Match: gi|802634001|ref|XP_012077783.1| (PREDICTED: polcalcin Che a 3-like [Jatropha curcas])

HSP 1 Score: 146.0 bits (367), Expect = 3.0e-32
Identity = 70/84 (83.33%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADDA+D  DR+RIFKRFD NGDG+ISA+ELG+ LKTLGSVTPDEV+RMMAEIDTDGDGY
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISY+EFTDFA ANRGL++DVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. NCBI nr
Match: gi|659121144|ref|XP_008460520.1| (PREDICTED: polcalcin Ole e 3 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 3.9e-32
Identity = 70/84 (83.33%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D+ +R+RIFKRFDANGDG+IS+SELGE+LKTLGSVT DEVQRMMAEIDTDGDG+
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSSELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISYEEFTDFA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. NCBI nr
Match: gi|449445084|ref|XP_004140303.1| (PREDICTED: polcalcin Ole e 3 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 8.8e-32
Identity = 69/84 (82.14%), Postives = 80/84 (95.24%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D+ +R+RIFKRFDANGDG+IS++ELGE+LKTLGSVT DEVQRMMAEIDTDGDG+
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISYEEFTDFA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmoCh15G007660 vs. NCBI nr
Match: gi|1012361862|gb|KYP73045.1| (Polcalcin Ole e 3 [Cajanus cajan])

HSP 1 Score: 141.7 bits (356), Expect = 5.7e-31
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D  DR+RIFK FDANGDG+IS++ELGE+LK LGSVTPDEVQRMM EIDTDGDGY
Sbjct: 1  MADDPQDVADRERIFKHFDANGDGQISSAELGEALKALGSVTPDEVQRMMEEIDTDGDGY 60

Query: 61 ISYEEFTDFACANRGLIRDVAKIF 85
          ISYEEFT+FA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTEFARANRGLVKDVAKIF 84

The following BLAST results are available for this feature:

BLAST of CmoCh15G007660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLC4_BETPN	8.8e-32	77.65	Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1	[more]
ALL3_OLEEU	8.8e-32	77.38	Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1	[more]
POLC3_CHEAL	7.4e-31	76.83	Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1	[more]
POLC2_BRANA	1.7e-30	76.54	Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1	[more]
POLC2_BRACM	1.7e-30	76.54	Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1	[more]

BLAST of CmoCh15G007660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KMY8_JATCU	2.1e-32	83.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1	[more]
A0A0A0KQB8_CUCSA	6.1e-32	82.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1	[more]
A0A151U189_CAJCA	4.0e-31	80.95	Polcalcin Ole e 3 OS=Cajanus cajan GN=KK1_005654 PE=4 SV=1	[more]
A0A061EH29_THECC	1.2e-30	82.14	Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_019206 PE=4 SV=...	[more]
W8PPL7_FRAEX	2.0e-30	78.57	Fra e 3.01 allergen OS=Fraxinus excelsior PE=2 SV=1	[more]

BLAST of CmoCh15G007660 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17480.1	7.9e-31	77.78	pollen calcium-binding protein 1	[more]
AT3G03430.1	1.0e-30	74.07	Calcium-binding EF-hand family protein	[more]
AT1G24620.1	5.3e-11	48.28	EF hand calcium-binding protein family	[more]
AT1G73630.1	6.9e-11	54.55	EF hand calcium-binding protein family	[more]
AT1G18210.1	3.4e-10	38.10	Calcium-binding EF-hand family protein	[more]

BLAST of CmoCh15G007660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1009126557\|ref\|XP_015880220.1\|	7.9e-33	84.52	PREDICTED: polcalcin Bet v 4 [Ziziphus jujuba]	[more]
gi\|802634001\|ref\|XP_012077783.1\|	3.0e-32	83.33	PREDICTED: polcalcin Che a 3-like [Jatropha curcas]	[more]
gi\|659121144\|ref\|XP_008460520.1\|	3.9e-32	83.33	PREDICTED: polcalcin Ole e 3 [Cucumis melo]	[more]
gi\|449445084\|ref\|XP_004140303.1\|	8.8e-32	82.14	PREDICTED: polcalcin Ole e 3 [Cucumis sativus]	[more]
gi\|1012361862\|gb\|KYP73045.1\|	5.7e-31	80.95	Polcalcin Ole e 3 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G007660.1	CmoCh15G007660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 13..69 score: 3.8
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 45..73 score: 1.7E-4coord: 10..38 score: 0
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 6..41 score: 13.007coord: 44..76 score: 11
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 11..70 score: 4.2
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 13..70 score: 2.21
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66 score: -coord: 19..31 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 12..82 score: 5.2
None	No IPR available	PANTHER	PTHR10891:SF605	CALCIUM-BINDING PROTEIN CML25-RELATED	coord: 12..82 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G007660	Cucsa.006310	Cucumber (Gy14) v1	cgycmoB0115
CmoCh15G007660	CmaCh15G007420	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G007660	CmaCh04G022940	Cucurbita maxima (Rimu)	cmacmoB693
CmoCh15G007660	Cla019760	Watermelon (97103) v1	cmowmB254
CmoCh15G007660	Csa5G420320	Cucumber (Chinese Long) v2	cmocuB280
CmoCh15G007660	MELO3C022853	Melon (DHL92) v3.5.1	cmomeB240
CmoCh15G007660	ClCG03G008650	Watermelon (Charleston Gray)	cmowcgB250
CmoCh15G007660	CSPI05G15000	Wild cucumber (PI 183967)	cmocpiB289
CmoCh15G007660	Lsi09G009300	Bottle gourd (USVL1VR-Ls)	cmolsiB256
CmoCh15G007660	Cp4.1LG13g05230	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G007660	Cp4.1LG01g19920	Cucurbita pepo (Zucchini)	cmocpeB280
CmoCh15G007660	MELO3C022853.2	Melon (DHL92) v3.6.1	cmomedB273
CmoCh15G007660	CsaV3_5G024070	Cucumber (Chinese Long) v3	cmocucB0337
CmoCh15G007660	Cla97C03G059900	Watermelon (97103) v2	cmowmbB283
CmoCh15G007660	Bhi12G001069	Wax gourd	cmowgoB0367
CmoCh15G007660	CsGy5G014870	Cucumber (Gy14) v2	cgybcmoB574
CmoCh15G007660	Carg18269	Silver-seed gourd	carcmoB0714

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G007660	CmoCh04G023980	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G007660	Silver-seed gourd	carcmoB1118