CmaCh15G007420 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G007420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Calcium binding protein
Location	Cma_Chr15 : 3610029 .. 3610283 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATGATGCTAAAGACAAAGTTGACCGAGACCGAATTTTCAAGCGCTTCGATGCCAATGGTGACGGTAGGATCTCTGCATCGGAGCTCGGTGAATCCTTGAAGACGCTTGGCTCCGTTACCCCTGACGAAGTGCAGCGGATGATGGCCGAGATCGACACCGACGGCGATGGGTACATTTCATACGAAGAGTTCACGGATTTTGCCCGTGCCAACCGTGGTTTAATCAGAGATGTTGCAAAGATATTCTAA

mRNA sequence

ATGGCTGATGATGCTAAAGACAAAGTTGACCGAGACCGAATTTTCAAGCGCTTCGATGCCAATGGTGACGGTAGGATCTCTGCATCGGAGCTCGGTGAATCCTTGAAGACGCTTGGCTCCGTTACCCCTGACGAAGTGCAGCGGATGATGGCCGAGATCGACACCGACGGCGATGGGTACATTTCATACGAAGAGTTCACGGATTTTGCCCGTGCCAACCGTGGTTTAATCAGAGATGTTGCAAAGATATTCTAA

Coding sequence (CDS)

ATGGCTGATGATGCTAAAGACAAAGTTGACCGAGACCGAATTTTCAAGCGCTTCGATGCCAATGGTGACGGTAGGATCTCTGCATCGGAGCTCGGTGAATCCTTGAAGACGCTTGGCTCCGTTACCCCTGACGAAGTGCAGCGGATGATGGCCGAGATCGACACCGACGGCGATGGGTACATTTCATACGAAGAGTTCACGGATTTTGCCCGTGCCAACCGTGGTTTAATCAGAGATGTTGCAAAGATATTCTAA

Protein sequence

MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYISYEEFTDFARANRGLIRDVAKIF

Homology

[Close]

BLAST of CmaCh15G007420 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-32
Identity = 67/85 (78.82%), Postives = 80/85 (94.12%), Query Frame = 1


Query: 1  MADD-AKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDG 60
          MADD  +DK +R+RIFKRFDANGDG+ISA+ELGE+LKTLGS+TPDEV+ MMAEIDTDGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 YISYEEFTDFARANRGLIRDVAKIF 85
          +IS++EFTDF RANRGL++DVAKIF
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of CmaCh15G007420 vs. Swiss-Prot
Match: ALL3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-32
Identity = 66/84 (78.57%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD ++  + +RIFKRFDANGDG+IS+SELGE+LKTLGSVTP+E+QRMMAEIDTDGDG+
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          IS+EEFT FARANRGL++DVAKIF
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. Swiss-Prot
Match: POLC3_CHEAL (Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-31
Identity = 64/82 (78.05%), Postives = 77/82 (93.90%), Query Frame = 1


Query: 3  DDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYIS 62
          D  +D  DR+RIFKRFD NGDG+IS+SELG++LKTLGSVTPDEV+RMMAEIDTDGDG+IS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 YEEFTDFARANRGLIRDVAKIF 85
          ++EFTDFARANRGL++DV+KIF
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]

BLAST of CmaCh15G007420 vs. Swiss-Prot
Match: POLC4_ALNGL (Polcalcin Aln g 4 OS=Alnus glutinosa PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 9.7e-31
Identity = 65/85 (76.47%), Postives = 79/85 (92.94%), Query Frame = 1


Query: 1  MADD-AKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDG 60
          MADD  +D+ + +RIFK FDANGDG+ISASELG++LKTLGSVTPDEV+ MMAEIDTDGDG
Sbjct: 1  MADDHPQDQAEHERIFKCFDANGDGKISASELGDALKTLGSVTPDEVKHMMAEIDTDGDG 60

Query: 61 YISYEEFTDFARANRGLIRDVAKIF 85
          +IS++EFT+FARANRGL++DVAKIF
Sbjct: 61 FISFQEFTNFARANRGLVKDVAKIF 85

[Close]

BLAST of CmaCh15G007420 vs. Swiss-Prot
Match: POLC1_TOBAC (Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-30
Identity = 63/84 (75.00%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MA+D +D  DR+RIFKRFD NGDG+IS++ELGE+LK LGSVT +EVQ MMAE+DTDGDG+
Sbjct: 1  MAEDPQDIADRERIFKRFDLNGDGKISSAELGETLKMLGSVTSEEVQHMMAELDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISYEEF +FARANRGLI+DVAK+F
Sbjct: 61 ISYEEFEEFARANRGLIKDVAKVF 84

[Close]

BLAST of CmaCh15G007420 vs. TrEMBL
Match: A0A0A0KQB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.4e-33
Identity = 70/84 (83.33%), Postives = 81/84 (96.43%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D+ +R+RIFKRFDANGDG+IS++ELGE+LKTLGSVT DEVQRMMAEIDTDGDG+
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISYEEFTDFARANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. TrEMBL
Match: A0A067KMY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-32
Identity = 70/84 (83.33%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADDA+D  DR+RIFKRFD NGDG+ISA+ELG+ LKTLGSVTPDEV+RMMAEIDTDGDGY
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISY+EFTDFA ANRGL++DVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. TrEMBL
Match: A0A151U189_CAJCA (Polcalcin Ole e 3 OS=Cajanus cajan GN=KK1_005654 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 6.1e-32
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D  DR+RIFK FDANGDG+IS++ELGE+LK LGSVTPDEVQRMM EIDTDGDGY
Sbjct: 1  MADDPQDVADRERIFKHFDANGDGQISSAELGEALKALGSVTPDEVQRMMEEIDTDGDGY 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISYEEFT+FARANRGL++DVAKIF
Sbjct: 61 ISYEEFTEFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. TrEMBL
Match: W8PPL7_FRAEX (Fra e 3.01 allergen OS=Fraxinus excelsior PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.0e-31
Identity = 67/84 (79.76%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD ++    +RIFKR DANGDG+IS+SELGE+LKTLGS+TPDE+QRMMAEIDTDGDG+
Sbjct: 1  MADDPQEVAQLERIFKRLDANGDGKISSSELGETLKTLGSITPDEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISYEEFTDFARANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. TrEMBL
Match: A0A0S3RKY3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G092300 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 6.8e-31
Identity = 68/84 (80.95%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D  DR+RIFKRFDANGDG+IS++ELGE+LK LGSVT +EVQRMM EIDTDGDGY
Sbjct: 1  MADDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTSEEVQRMMEEIDTDGDGY 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          IS+EEFT+FARANRGL+RDVAKIF
Sbjct: 61 ISHEEFTEFARANRGLVRDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 130.2 bits (326), Expect = 6.0e-31
Identity = 63/81 (77.78%), Postives = 74/81 (91.36%), Query Frame = 1


Query: 4  DAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYISY 63
          DA +K + DRIFK+FDANGDG+ISA+EL E+LKTLGSVT D+V+RMMAEIDTDGDG ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISY 62

Query: 64 EEFTDFARANRGLIRDVAKIF 85
          +EFTDFA ANRGL++DVAKIF
Sbjct: 63 QEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh15G007420 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.0e-30
Identity = 60/81 (74.07%), Postives = 74/81 (91.36%), Query Frame = 1


Query: 4  DAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGYISY 63
          DA +K + DRIFK+FDANGDG+ISA+ELG++LK LGSVT ++++RMMAEIDTDGDGYISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTDFARANRGLIRDVAKIF 85
          +EF DFA ANRGL++DVAKIF
Sbjct: 63 QEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh15G007420 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 66.6 bits (161), Expect = 8.2e-12
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 1


Query: 13 RIFKRFDANGDGRISASELGESLKTLG-SVTPDEVQRMMAEIDTDGDGYISYEEFTDFAR 72
          ++F +FDANGDG+IS SELG   K++G S T +E+ R++ EID D DG+I+ EEF    R
Sbjct: 23 KVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICR 82

Query: 73 ANRGLI 78
          ++   +
Sbjct: 83 SSSSAV 88

[Close]

BLAST of CmaCh15G007420 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 63.9 bits (154), Expect = 5.3e-11
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 1


Query: 12 DRIFKRFDANGDGRISASELGESLKTLGSVTP-DEVQRMMAEIDTDGDGYISYEEFTD 69
          + +FK+FD NGDG+IS+ ELG  + +LG   P +E+++ + EID  GDGYI++EEF +
Sbjct: 39 EAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

[Close]

BLAST of CmaCh15G007420 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 63.9 bits (154), Expect = 5.3e-11
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 1


Query: 4   DAKDKVDRDRIFKRFDANGDGRISASELGESLKTLG-SVTPDEVQRMMAEIDTDGDGYIS 63
           D  +  +  ++F +FD+NGDG+IS  ELG   K +G S T  E+ R++ E+DTD DGYI+
Sbjct: 17  DMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYIN 76

Query: 64  YEEFTDFARANRGL--IRDVAKIF 85
            +EF+   R++     IRD   ++
Sbjct: 77  LDEFSTLCRSSSSAAEIRDAFDLY 100

[Close]

BLAST of CmaCh15G007420 vs. NCBI nr
Match: gi|659121144|ref|XP_008460520.1| (PREDICTED: polcalcin Ole e 3 [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 6.1e-33
Identity = 71/84 (84.52%), Postives = 81/84 (96.43%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D+ +R+RIFKRFDANGDG+IS+SELGE+LKTLGSVT DEVQRMMAEIDTDGDG+
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSSELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISYEEFTDFARANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. NCBI nr
Match: gi|449445084|ref|XP_004140303.1| (PREDICTED: polcalcin Ole e 3 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-32
Identity = 70/84 (83.33%), Postives = 81/84 (96.43%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D+ +R+RIFKRFDANGDG+IS++ELGE+LKTLGSVT DEVQRMMAEIDTDGDG+
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISYEEFTDFARANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. NCBI nr
Match: gi|802634001|ref|XP_012077783.1| (PREDICTED: polcalcin Che a 3-like [Jatropha curcas])

HSP 1 Score: 145.6 bits (366), Expect = 3.9e-32
Identity = 70/84 (83.33%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADDA+D  DR+RIFKRFD NGDG+ISA+ELG+ LKTLGSVTPDEV+RMMAEIDTDGDGY
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISY+EFTDFA ANRGL++DVAKIF
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. NCBI nr
Match: gi|1012361862|gb|KYP73045.1| (Polcalcin Ole e 3 [Cajanus cajan])

HSP 1 Score: 144.4 bits (363), Expect = 8.8e-32
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D  DR+RIFK FDANGDG+IS++ELGE+LK LGSVTPDEVQRMM EIDTDGDGY
Sbjct: 1  MADDPQDVADRERIFKHFDANGDGQISSAELGEALKALGSVTPDEVQRMMEEIDTDGDGY 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          ISYEEFT+FARANRGL++DVAKIF
Sbjct: 61 ISYEEFTEFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh15G007420 vs. NCBI nr
Match: gi|950990396|ref|XP_014504310.1| (PREDICTED: polcalcin Ole e 3 [Vigna radiata var. radiata])

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-31
Identity = 69/84 (82.14%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60
          MADD +D  DR+RIFKRFDANGDG+IS++ELGE+LK LGSVTP+EVQRMM EIDTDGDGY
Sbjct: 1  MADDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTPEEVQRMMEEIDTDGDGY 60

Query: 61 ISYEEFTDFARANRGLIRDVAKIF 85
          IS+EEFT+FARANRGL+RDVAKIF
Sbjct: 61 ISHEEFTEFARANRGLVRDVAKIF 84

The following BLAST results are available for this feature:

BLAST of CmaCh15G007420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLC4_BETPN	1.4e-32	78.82	Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1	[more]
ALL3_OLEEU	1.4e-32	78.57	Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1	[more]
POLC3_CHEAL	1.1e-31	78.05	Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1	[more]
POLC4_ALNGL	9.7e-31	76.47	Polcalcin Aln g 4 OS=Alnus glutinosa PE=1 SV=1	[more]
POLC1_TOBAC	1.3e-30	75.00	Polcalcin Nic t 1 OS=Nicotiana tabacum GN=Nict1 PE=1 SV=1	[more]

BLAST of CmaCh15G007420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQB8_CUCSA	9.4e-33	83.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1	[more]
A0A067KMY8_JATCU	2.7e-32	83.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1	[more]
A0A151U189_CAJCA	6.1e-32	82.14	Polcalcin Ole e 3 OS=Cajanus cajan GN=KK1_005654 PE=4 SV=1	[more]
W8PPL7_FRAEX	3.0e-31	79.76	Fra e 3.01 allergen OS=Fraxinus excelsior PE=2 SV=1	[more]
A0A0S3RKY3_PHAAN	6.8e-31	80.95	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G092300 PE=...	[more]

BLAST of CmaCh15G007420 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17480.1	6.0e-31	77.78	pollen calcium-binding protein 1	[more]
AT3G03430.1	1.0e-30	74.07	Calcium-binding EF-hand family protein	[more]
AT1G73630.1	8.2e-12	46.97	EF hand calcium-binding protein family	[more]
AT1G24620.1	5.3e-11	48.28	EF hand calcium-binding protein family	[more]
AT1G18210.1	5.3e-11	39.29	Calcium-binding EF-hand family protein	[more]

BLAST of CmaCh15G007420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121144\|ref\|XP_008460520.1\|	6.1e-33	84.52	PREDICTED: polcalcin Ole e 3 [Cucumis melo]	[more]
gi\|449445084\|ref\|XP_004140303.1\|	1.4e-32	83.33	PREDICTED: polcalcin Ole e 3 [Cucumis sativus]	[more]
gi\|802634001\|ref\|XP_012077783.1\|	3.9e-32	83.33	PREDICTED: polcalcin Che a 3-like [Jatropha curcas]	[more]
gi\|1012361862\|gb\|KYP73045.1\|	8.8e-32	82.14	Polcalcin Ole e 3 [Cajanus cajan]	[more]
gi\|950990396\|ref\|XP_014504310.1\|	1.1e-31	82.14	PREDICTED: polcalcin Ole e 3 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G007420.1	CmaCh15G007420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 13..70 score: 2.5
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 45..73 score: 1.5E-6coord: 10..38 score: 0
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 41..76 score: 13.872coord: 6..40 score: 11
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 11..73 score: 2.5
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 13..70 score: 2.21
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66 score: -coord: 19..31 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 12..82 score: 4.3
None	No IPR available	PANTHER	PTHR10891:SF605	CALCIUM-BINDING PROTEIN CML25-RELATED	coord: 12..82 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G007420	Cucsa.006310	Cucumber (Gy14) v1	cgycmaB0119
CmaCh15G007420	Cla019760	Watermelon (97103) v1	cmawmB264
CmaCh15G007420	Csa5G420320	Cucumber (Chinese Long) v2	cmacuB293
CmaCh15G007420	MELO3C022853	Melon (DHL92) v3.5.1	cmameB252
CmaCh15G007420	ClCG03G008650	Watermelon (Charleston Gray)	cmawcgB261
CmaCh15G007420	CSPI05G15000	Wild cucumber (PI 183967)	cmacpiB297
CmaCh15G007420	CmoCh04G023980	Cucurbita moschata (Rifu)	cmacmoB309
CmaCh15G007420	CmoCh15G007660	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G007420	Lsi09G009300	Bottle gourd (USVL1VR-Ls)	cmalsiB268
CmaCh15G007420	Cp4.1LG13g05230	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G007420	Cp4.1LG01g19920	Cucurbita pepo (Zucchini)	cmacpeB318
CmaCh15G007420	MELO3C022853.2	Melon (DHL92) v3.6.1	cmamedB287
CmaCh15G007420	CsaV3_5G024070	Cucumber (Chinese Long) v3	cmacucB0343
CmaCh15G007420	Cla97C03G059900	Watermelon (97103) v2	cmawmbB300
CmaCh15G007420	Bhi12G001069	Wax gourd	cmawgoB0373
CmaCh15G007420	CsGy5G014870	Cucumber (Gy14) v2	cgybcmaB600
CmaCh15G007420	Carg18269	Silver-seed gourd	carcmaB0737

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G007420	CmaCh04G022940	Cucurbita maxima (Rimu)	cmacmaB325

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G007420	Silver-seed gourd	carcmaB1148