Cp4.1LG01g10190 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g10190
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	TCP family transcription factor
Location	Cp4.1LG01 : 6847350 .. 6848102 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATTCCGATTCTGGCAACACCAATGGAGTCTCCAATGGCGCCGCCATTGATACCCCCAAAAACCAGCCCTCTTCAAATGGGGCCCTCGTCGTTAAAAAGCCTCCCTCCAAGGACCGCCATAGCAAGGTCGATGGTCGTGGTCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGTTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCTATTATTGCCGCCACTGGTACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCCACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGCCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTTAGGTCCGATGACGACGGCGGTAAGGACGATGGGTCGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGGTTCCAGCGAGACCCGATTATGGGCAGGTGTGGAGTTTTGCCGCCGCGGCTCCCTCAGAAATGGTGGTTCAACCCGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCCCAACCGCAGCAGCCGATTAGAGAAGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCAGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGGCGGGAAGATGACCCTCGCTGA

mRNA sequence

ATGTCGAATTCCGATTCTGGCAACACCAATGGAGTCTCCAATGGCGCCGCCATTGATACCCCCAAAAACCAGCCCTCTTCAAATGGGGCCCTCGTCGTTAAAAAGCCTCCCTCCAAGGACCGCCATAGCAAGGTCGATGGTCGTGGTCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGTTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCTATTATTGCCGCCACTGGTACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCCACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGCCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTTAGGTCCGATGACGACGGCGGTAAGGACGATGGGTCGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGGTTCCAGCGAGACCCGATTATGGGCAGGTGTGGAGTTTTGCCGCCGCGGCTCCCTCAGAAATGGTGGTTCAACCCGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCCCAACCGCAGCAGCCGATTAGAGAAGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCAGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGGCGGGAAGATGACCCTCGCTGA

Coding sequence (CDS)

ATGTCGAATTCCGATTCTGGCAACACCAATGGAGTCTCCAATGGCGCCGCCATTGATACCCCCAAAAACCAGCCCTCTTCAAATGGGGCCCTCGTCGTTAAAAAGCCTCCCTCCAAGGACCGCCATAGCAAGGTCGATGGTCGTGGTCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGTTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCTATTATTGCCGCCACTGGTACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCCACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGCCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTTAGGTCCGATGACGACGGCGGTAAGGACGATGGGTCGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGGTTCCAGCGAGACCCGATTATGGGCAGGTGTGGAGTTTTGCCGCCGCGGCTCCCTCAGAAATGGTGGTTCAACCCGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCCCAACCGCAGCAGCCGATTAGAGAAGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCAGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGGCGGGAAGATGACCCTCGCTGA

Protein sequence

MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGSGVGPTGPGGYWAVPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLNLLASLSGGGGSGRREDDPR

Homology

[Close]

BLAST of Cp4.1LG01g10190 vs. Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.1e-69
Identity = 164/262 (62.60%), Postives = 188/262 (71.76%), Query Frame = 1


Query: 2   SNSDSGNTNGV---SNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIIC 61
           +N+++ N +G+   SNGA I+    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPIIC
Sbjct: 7   NNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIIC 66

Query: 62  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSL 121
           AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   STSL
Sbjct: 67  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSL 126

Query: 122 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKD-DGSGVG-----PTGPGGYWA 181
               ++           L G +PFILGKRVR+D+D     + S VG      T P G+WA
Sbjct: 127 DHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWA 186

Query: 182 VPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQ---PIREASAARVGNYLPSH 241
           VPARPD+GQVWSF A AP EM +Q     QQ     Q QQ    + EASAARVGNYLP H
Sbjct: 187 VPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGH 246

Query: 242 LNLLASLSGGG-GSGRREDDPR 251
           LNLLASLSGG  GS RRE+DPR
Sbjct: 247 LNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of Cp4.1LG01g10190 vs. Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-61
Identity = 152/266 (57.14%), Postives = 165/266 (62.03%), Query Frame = 1


Query: 8   NTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 67
           N   VSNG  ++   N+   N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR
Sbjct: 4   NDGAVSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 63

Query: 68  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTST 127
           ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                   
Sbjct: 64  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS----------------- 123

Query: 128 LSLSRPQALSGPTPFILGKRVRSDDDGGKDDGSGVGPT-------------GPGGYWAVP 187
                       +PF LGKRV   ++G    G G G T             G GG+WAVP
Sbjct: 124 ------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 183

Query: 188 ARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQ----------PIREASAARVGN 247
           ARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVGN
Sbjct: 184 ARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVGN 235

Query: 248 YLPS-HLNLLASLSGG-GGSGRREDD 249
           YLP  HLNLLASLSGG  GSGRREDD
Sbjct: 244 YLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of Cp4.1LG01g10190 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-31
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 28  NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 87
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 88  RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGP 140
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

[Close]

BLAST of Cp4.1LG01g10190 vs. Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31
Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 1


Query: 6   SGNTNGVSNGAAIDTPKNQPSSNGALVVKKP----PSKDRHSKVDGRGRRIRMPIICAAR 65
           SG    +S  A   T     SS  AL V K     P+KDRH+KVDGRGRRIRMP +CAAR
Sbjct: 30  SGQHGNISTSA---TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAAR 89

Query: 66  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSP 125
           VFQLTRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGST  S  
Sbjct: 90  VFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQA 149

Query: 126 SSTTST 128
           S ++S+
Sbjct: 150 SKSSSS 152

[Close]

BLAST of Cp4.1LG01g10190 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-30
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 26  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 85
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 86  EPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTL 129
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

[Close]

BLAST of Cp4.1LG01g10190 vs. TrEMBL
Match: A0A0A0KPX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 4.1e-116
Identity = 234/259 (90.35%), Postives = 237/259 (91.51%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD  +TNGVSNGA IDT KN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDD--------GSGVGPTGPGGYW 180
           SPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD  KDD        GS VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AVPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLN 240
           A+PARPDYGQVWSFAAAAPSEMVVQPGGI+QQASLFAQ QQPIREASAARVGNYLP HLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 251
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Cp4.1LG01g10190 vs. TrEMBL
Match: V4VEH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.7e-85
Identity = 192/268 (71.64%), Postives = 207/268 (77.24%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD G TNGVSNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGSGVGP------TGP----G 180
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  S VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 181 GYWAVPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQP-----QQPIREASAARVG 240
           G+WA+PARPD+GQVWSFAAAA  EMVVQ     QQ     QP     QQ + EASAARVG
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQAAS-QQQHHHHQQPHQLFMQQAMGEASAARVG 240

Query: 241 NYLPSHLNLLASLSGG-GGSGRREDDPR 251
           NYLP HLNLLASLSGG G SGRRE+DPR
Sbjct: 241 NYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of Cp4.1LG01g10190 vs. TrEMBL
Match: A0A067ENE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.7e-85
Identity = 192/268 (71.64%), Postives = 207/268 (77.24%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD G TNGVSNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGSGVGP------TGP----G 180
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  S VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 181 GYWAVPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQP-----QQPIREASAARVG 240
           G+WA+PARPD+GQVWSFAAAA  EMVVQ     QQ     QP     QQ + EASAARVG
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQAAS-QQQHHHHQQPHQLFMQQAMGEASAARVG 240

Query: 241 NYLPSHLNLLASLSGG-GGSGRREDDPR 251
           NYLP HLNLLASLSGG G SGRRE+DPR
Sbjct: 241 NYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of Cp4.1LG01g10190 vs. TrEMBL
Match: A0A061E220_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.0e-83
Identity = 189/271 (69.74%), Postives = 206/271 (76.01%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNS+ G TNG    A +D  + Q   NG+LVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSEGGATNG----AIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG   STSL  
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSL-- 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDD----------GSGVGPTGPGG 180
            SST S+ SL   + L GPTPFILGKRVR+DDD  GKDD          GS VGP G GG
Sbjct: 121 -SSTISSSSLDH-KPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGG 180

Query: 181 YWAVPARPDYGQVWSFAAAAPSEMVVQ------PGGISQQ---ASLFAQPQQPIREASAA 240
           +WAVPARPD+GQVWSFA   P EMVVQ          +QQ   A+LF Q QQ + EASAA
Sbjct: 181 FWAVPARPDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAA 240

Query: 241 RVGNYLPSHLNLLASLSGG-GGSGRREDDPR 251
           RVGNYLP HLNLLASLSG  GGSGRR++DPR
Sbjct: 241 RVGNYLPGHLNLLASLSGAPGGSGRRDEDPR 263

[Close]

BLAST of Cp4.1LG01g10190 vs. TrEMBL
Match: I1LF87_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G285900 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-80
Identity = 187/261 (71.65%), Postives = 204/261 (78.16%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD+  TNGVSNGA ID  + Q     AL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSDA-TTNGVSNGAIIDAQRQQ-----ALAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATG+GTTPA+FSSVSLSVR    + SLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSSVSLSVR--AAANSLSS 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDG-----SGVGPTGPGGYWAVPA 180
           PSST+      +PQ LS PTPFILGKR+R+D+D  KD+      S VGP+ P G WA+PA
Sbjct: 121 PSSTSD----HKPQLLS-PTPFILGKRIRTDEDSSKDEAVSVGPSLVGPSTPPGLWALPA 180

Query: 181 RPDYGQVWSFAAAAPSEMVVQPGGISQQASLFA-----QPQQPIREASAARVGNYLPSHL 240
           RPD+GQ+WSFAAAA  EMV       QQASLFA     Q QQ I EASAARVGNYLP HL
Sbjct: 181 RPDFGQIWSFAAAAAPEMV--SVSQQQQASLFAHHHRQQQQQAIGEASAARVGNYLPGHL 240

Query: 241 NLLASLSGG-GGSGRREDDPR 251
           NLLASLSGG G SGRR+D+PR
Sbjct: 241 NLLASLSGGPGNSGRRDDEPR 246

[Close]

BLAST of Cp4.1LG01g10190 vs. TAIR10
Match: AT5G23280.1 (AT5G23280.1 TCP family transcription factor )

HSP 1 Score: 262.7 bits (670), Expect = 2.3e-70
Identity = 164/262 (62.60%), Postives = 188/262 (71.76%), Query Frame = 1


Query: 2   SNSDSGNTNGV---SNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIIC 61
           +N+++ N +G+   SNGA I+    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPIIC
Sbjct: 7   NNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIIC 66

Query: 62  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSL 121
           AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   STSL
Sbjct: 67  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSL 126

Query: 122 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKD-DGSGVG-----PTGPGGYWA 181
               ++           L G +PFILGKRVR+D+D     + S VG      T P G+WA
Sbjct: 127 DHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWA 186

Query: 182 VPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQ---PIREASAARVGNYLPSH 241
           VPARPD+GQVWSF A AP EM +Q     QQ     Q QQ    + EASAARVGNYLP H
Sbjct: 187 VPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGH 246

Query: 242 LNLLASLSGGG-GSGRREDDPR 251
           LNLLASLSGG  GS RRE+DPR
Sbjct: 247 LNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of Cp4.1LG01g10190 vs. TAIR10
Match: AT5G08330.1 (AT5G08330.1 TCP family transcription factor )

HSP 1 Score: 237.7 bits (605), Expect = 8.0e-63
Identity = 152/266 (57.14%), Postives = 165/266 (62.03%), Query Frame = 1


Query: 8   NTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 67
           N   VSNG  ++   N+   N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR
Sbjct: 4   NDGAVSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 63

Query: 68  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTST 127
           ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                   
Sbjct: 64  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS----------------- 123

Query: 128 LSLSRPQALSGPTPFILGKRVRSDDDGGKDDGSGVGPT-------------GPGGYWAVP 187
                       +PF LGKRV   ++G    G G G T             G GG+WAVP
Sbjct: 124 ------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 183

Query: 188 ARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQ----------PIREASAARVGN 247
           ARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVGN
Sbjct: 184 ARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVGN 235

Query: 248 YLPS-HLNLLASLSGG-GGSGRREDD 249
           YLP  HLNLLASLSGG  GSGRREDD
Sbjct: 244 YLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of Cp4.1LG01g10190 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 138.3 bits (347), Expect = 6.6e-33
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 28  NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 87
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 88  RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGP 140
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

[Close]

BLAST of Cp4.1LG01g10190 vs. TAIR10
Match: AT1G72010.1 (AT1G72010.1 TCP family transcription factor )

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-32
Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 1


Query: 6   SGNTNGVSNGAAIDTPKNQPSSNGALVVKKP----PSKDRHSKVDGRGRRIRMPIICAAR 65
           SG    +S  A   T     SS  AL V K     P+KDRH+KVDGRGRRIRMP +CAAR
Sbjct: 30  SGQHGNISTSA---TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAAR 89

Query: 66  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSP 125
           VFQLTRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGST  S  
Sbjct: 90  VFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQA 149

Query: 126 SSTTST 128
           S ++S+
Sbjct: 150 SKSSSS 152

[Close]

BLAST of Cp4.1LG01g10190 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 26  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 85
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 86  EPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTL 129
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

[Close]

BLAST of Cp4.1LG01g10190 vs. NCBI nr
Match: gi|449451743|ref|XP_004143620.1| (PREDICTED: transcription factor TCP7-like [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 5.9e-116
Identity = 234/259 (90.35%), Postives = 237/259 (91.51%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD  +TNGVSNGA IDT KN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDD--------GSGVGPTGPGGYW 180
           SPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD  KDD        GS VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AVPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLN 240
           A+PARPDYGQVWSFAAAAPSEMVVQPGGI+QQASLFAQ QQPIREASAARVGNYLP HLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 251
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Cp4.1LG01g10190 vs. NCBI nr
Match: gi|659090197|ref|XP_008445886.1| (PREDICTED: transcription factor TCP7-like [Cucumis melo])

HSP 1 Score: 425.2 bits (1092), Expect = 7.7e-116
Identity = 234/259 (90.35%), Postives = 237/259 (91.51%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD  +TNGVSN AAID+ KNQ SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGSG--------VGPTGPGGYW 180
           SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD  KDDG G        VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-AKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AVPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLN 240
           A+PARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQ QQPIREASAARVGNYLP HLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 251
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Cp4.1LG01g10190 vs. NCBI nr
Match: gi|567890197|ref|XP_006437619.1| (hypothetical protein CICLE_v10032441mg [Citrus clementina])

HSP 1 Score: 322.8 bits (826), Expect = 5.4e-85
Identity = 192/268 (71.64%), Postives = 207/268 (77.24%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD G TNGVSNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGSGVGP------TGP----G 180
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  S VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 181 GYWAVPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQP-----QQPIREASAARVG 240
           G+WA+PARPD+GQVWSFAAAA  EMVVQ     QQ     QP     QQ + EASAARVG
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQAAS-QQQHHHHQQPHQLFMQQAMGEASAARVG 240

Query: 241 NYLPSHLNLLASLSGG-GGSGRREDDPR 251
           NYLP HLNLLASLSGG G SGRRE+DPR
Sbjct: 241 NYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of Cp4.1LG01g10190 vs. NCBI nr
Match: gi|590689527|ref|XP_007043253.1| (TCP family transcription factor [Theobroma cacao])

HSP 1 Score: 315.5 bits (807), Expect = 8.5e-83
Identity = 189/271 (69.74%), Postives = 206/271 (76.01%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNS+ G TNG    A +D  + Q   NG+LVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSEGGATNG----AIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG   STSL  
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSL-- 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDD----------GSGVGPTGPGG 180
            SST S+ SL   + L GPTPFILGKRVR+DDD  GKDD          GS VGP G GG
Sbjct: 121 -SSTISSSSLDH-KPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGG 180

Query: 181 YWAVPARPDYGQVWSFAAAAPSEMVVQ------PGGISQQ---ASLFAQPQQPIREASAA 240
           +WAVPARPD+GQVWSFA   P EMVVQ          +QQ   A+LF Q QQ + EASAA
Sbjct: 181 FWAVPARPDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAA 240

Query: 241 RVGNYLPSHLNLLASLSGG-GGSGRREDDPR 251
           RVGNYLP HLNLLASLSG  GGSGRR++DPR
Sbjct: 241 RVGNYLPGHLNLLASLSGAPGGSGRRDEDPR 263

[Close]

BLAST of Cp4.1LG01g10190 vs. NCBI nr
Match: gi|1021569620|ref|XP_016176021.1| (PREDICTED: transcription factor TCP7-like [Arachis ipaensis])

HSP 1 Score: 309.3 bits (791), Expect = 6.1e-81
Identity = 191/273 (69.96%), Postives = 212/273 (77.66%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTPKN---QPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPII 60
           MSN+D G +N V+N   IDT ++   Q  +NGALVVKKPPSKDRHSKVDGRGRRIRMPII
Sbjct: 1   MSNTD-GTSNAVTN---IDTHRHHSQQQPTNGALVVKKPPSKDRHSKVDGRGRRIRMPII 60

Query: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTS 120
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FSSVS+SVRG  G  S
Sbjct: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAG--S 120

Query: 121 LSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDDGSGVGP-----TGPG--- 180
           LSSPSST++  SL   + L  PTPFILGKR+R+DDD   KDDG  VGP      GPG   
Sbjct: 121 LSSPSSTSAASSLDH-KPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSLVGPGAPA 180

Query: 181 GYWAVPARPDYGQVWSFAAAA-PSEMVVQPGGIS----QQASLFA-----QPQQPIREAS 240
           G WA+PARPD+GQ+WSFA AA P EMVVQ   +S    QQASLF      Q QQ + EAS
Sbjct: 181 GLWALPARPDFGQIWSFATAAPPPEMVVQSAAVSVSQQQQASLFVHHQHQQQQQAMGEAS 240

Query: 241 AARVGNYLPSHLNLLASLSGG-GGSGRREDDPR 251
           AAR+GNYLP HLNLLASLSGG G SGRR+D+PR
Sbjct: 241 AARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR 266

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g10190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP7_ARATH	4.1e-69	62.60	Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1	[more]
TCP21_ARATH	1.4e-61	57.14	Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1	[more]
TCP14_ARATH	1.2e-31	63.25	Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1	[more]
TCP22_ARATH	3.4e-31	61.90	Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1	[more]
TCP8_ARATH	3.8e-30	66.99	Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g10190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX7_CUCSA	4.1e-116	90.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1	[more]
V4VEH8_9ROSI	3.7e-85	71.64	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1	[more]
A0A067ENE6_CITSI	3.7e-85	71.64	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1	[more]
A0A061E220_THECC	6.0e-83	69.74	TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1	[more]
I1LF87_SOYBN	1.2e-80	71.65	Uncharacterized protein OS=Glycine max GN=GLYMA_10G285900 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g10190 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23280.1	2.3e-70	62.60	TCP family transcription factor	[more]
AT5G08330.1	8.0e-63	57.14	TCP family transcription factor	[more]
AT3G47620.1	6.6e-33	63.25	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G72010.1	1.9e-32	61.90	TCP family transcription factor	[more]
AT1G58100.1	2.1e-31	66.99	TCP family transcription factor	[more]

BLAST of Cp4.1LG01g10190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451743\|ref\|XP_004143620.1\|	5.9e-116	90.35	PREDICTED: transcription factor TCP7-like [Cucumis sativus]	[more]
gi\|659090197\|ref\|XP_008445886.1\|	7.7e-116	90.35	PREDICTED: transcription factor TCP7-like [Cucumis melo]	[more]
gi\|567890197\|ref\|XP_006437619.1\|	5.4e-85	71.64	hypothetical protein CICLE_v10032441mg [Citrus clementina]	[more]
gi\|590689527\|ref\|XP_007043253.1\|	8.5e-83	69.74	TCP family transcription factor [Theobroma cacao]	[more]
gi\|1021569620\|ref\|XP_016176021.1\|	6.1e-81	69.96	PREDICTED: transcription factor TCP7-like [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g10190.1	Cp4.1LG01g10190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 38..124 score: 3.5
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 38..92 score: 28
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 8..165 score: 8.3
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 8..165 score: 8.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g10190	Cucsa.166230	Cucumber (Gy14) v1	cgycpeB0458
Cp4.1LG01g10190	CmaCh18G008100	Cucurbita maxima (Rimu)	cmacpeB429
Cp4.1LG01g10190	CmaCh04G012590	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g10190	CmaCh04G022460	Cucurbita maxima (Rimu)	cmacpeB736
Cp4.1LG01g10190	CmoCh04G013310	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g10190	CmoCh18G008120	Cucurbita moschata (Rifu)	cmocpeB392
Cp4.1LG01g10190	CmoCh04G023470	Cucurbita moschata (Rifu)	cmocpeB690
Cp4.1LG01g10190	Cla020050	Watermelon (97103) v1	cpewmB451
Cp4.1LG01g10190	Csa5G175170	Cucumber (Chinese Long) v2	cpecuB437
Cp4.1LG01g10190	MELO3C025049	Melon (DHL92) v3.5.1	cpemeB357
Cp4.1LG01g10190	MELO3C011754	Melon (DHL92) v3.5.1	cpemeB376
Cp4.1LG01g10190	ClCG02G014110	Watermelon (Charleston Gray)	cpewcgB376
Cp4.1LG01g10190	CSPI05G08570	Wild cucumber (PI 183967)	cpecpiB437
Cp4.1LG01g10190	Lsi04G007920	Bottle gourd (USVL1VR-Ls)	cpelsiB358
Cp4.1LG01g10190	Lsi09G008630	Bottle gourd (USVL1VR-Ls)	cpelsiB317
Cp4.1LG01g10190	MELO3C011754.2	Melon (DHL92) v3.6.1	cpemedB436
Cp4.1LG01g10190	MELO3C025049.2	Melon (DHL92) v3.6.1	cpemedB416
Cp4.1LG01g10190	CsaV3_5G006010	Cucumber (Chinese Long) v3	cpecucB0541
Cp4.1LG01g10190	Bhi07G000917	Wax gourd	cpewgoB0570
Cp4.1LG01g10190	CsGy5G005950	Cucumber (Gy14) v2	cgybcpeB646
Cp4.1LG01g10190	Carg14457	Silver-seed gourd	carcpeB1021
Cp4.1LG01g10190	Carg02051	Silver-seed gourd	carcpeB1177
Cp4.1LG01g10190	Carg17778	Silver-seed gourd	carcpeB0671

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g10190	Cp4.1LG09g04990	Cucurbita pepo (Zucchini)	cpecpeB041
Cp4.1LG01g10190	Cp4.1LG01g19550	Cucurbita pepo (Zucchini)	cpecpeB380

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g10190	Cucumber (Gy14) v2	cgybcpeB363
Cp4.1LG01g10190	Wax gourd	cpewgoB0556