Lsi04G007920 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G007920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	TCP family transcription factor
Location	chr04 : 7451543 .. 7452319 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATTCTGATCATACCAGCAACGCCAATGGCGTCTCTAATGGCGCCGCCATCGACACCCACAAGAATCAGCCCTCTTCTAATGGAGCCCTCGTCGTCAAAAAACCCCCTTCTAAGGACCGTCACAGTAAAGTCGACGGCCGTGGACGCCGCATCCGTATGCCCATCATCTGCGCCGCCAGAGTATTTCAGCTGACTCGAGAGCTTGGTCATAAGTCCGACGGCCAAACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCTTCCATTATTGCCGCCACTGGCACTGGTACTACCCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACCACTTCTACTCTCTCCCTCTCTCGCCCTCAAGCTCTCTCCGGTCCCACGCCGTTCATACTCGGCAAGCGCGTCAGGTCCGACGATGATGGCAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTACGACGGGGCCAGGTGGGTACTGGGCGATTCCTGCAAGGCCCGATTATGGGCAGGTTTGGAGTTTTGCCGCCGCCGCTCCGTCGGAGATGGTGGTTCAATCAGGGGGGATTTCTCAGCAAGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAGGCATCGGCGGCGAGAGTGGGAAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGTGGTGGTTCTGGGCGGCGGGAAGATGACCCTCGCTAA

mRNA sequence

ATGTCAAATTCTGATCATACCAGCAACGCCAATGGCGTCTCTAATGGCGCCGCCATCGACACCCACAAGAATCAGCCCTCTTCTAATGGAGCCCTCGTCGTCAAAAAACCCCCTTCTAAGGACCGTCACAGTAAAGTCGACGGCCGTGGACGCCGCATCCGTATGCCCATCATCTGCGCCGCCAGAGTATTTCAGCTGACTCGAGAGCTTGGTCATAAGTCCGACGGCCAAACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCTTCCATTATTGCCGCCACTGGCACTGGTACTACCCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACCACTTCTACTCTCTCCCTCTCTCGCCCTCAAGCTCTCTCCGGTCCCACGCCGTTCATACTCGGCAAGCGCGTCAGGTCCGACGATGATGGCAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTACGACGGGGCCAGGTGGGTACTGGGCGATTCCTGCAAGGCCCGATTATGGGCAGGTTTGGAGTTTTGCCGCCGCCGCTCCGTCGGAGATGGTGGTTCAATCAGGGGGGATTTCTCAGCAAGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAGGCATCGGCGGCGAGAGTGGGAAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGTGGTGGTTCTGGGCGGCGGGAAGATGACCCTCGCTAA

Coding sequence (CDS)

ATGTCAAATTCTGATCATACCAGCAACGCCAATGGCGTCTCTAATGGCGCCGCCATCGACACCCACAAGAATCAGCCCTCTTCTAATGGAGCCCTCGTCGTCAAAAAACCCCCTTCTAAGGACCGTCACAGTAAAGTCGACGGCCGTGGACGCCGCATCCGTATGCCCATCATCTGCGCCGCCAGAGTATTTCAGCTGACTCGAGAGCTTGGTCATAAGTCCGACGGCCAAACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCTTCCATTATTGCCGCCACTGGCACTGGTACTACCCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACCACTTCTACTCTCTCCCTCTCTCGCCCTCAAGCTCTCTCCGGTCCCACGCCGTTCATACTCGGCAAGCGCGTCAGGTCCGACGATGATGGCAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTACGACGGGGCCAGGTGGGTACTGGGCGATTCCTGCAAGGCCCGATTATGGGCAGGTTTGGAGTTTTGCCGCCGCCGCTCCGTCGGAGATGGTGGTTCAATCAGGGGGGATTTCTCAGCAAGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAGGCATCGGCGGCGAGAGTGGGAAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGTGGTGGTTCTGGGCGGCGGGAAGATGACCCTCGCTAA

Protein sequence

MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGSGRREDDPR

Homology

[Close]

BLAST of Lsi04G007920 vs. Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.6e-70
Identity = 164/266 (61.65%), Postives = 192/266 (72.18%), Query Frame = 1


Query: 2   SNSDHTSNANGV---SNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPII 61
           +N+++ +N +G+   SNGA I+    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPII
Sbjct: 6   NNNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPII 65

Query: 62  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSAS 121
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   S S
Sbjct: 66  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTS 125

Query: 122 LSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKD--DGLGVGQAVGSIVGTTGPG 181
           L    ++           L G +PFILGKRVR+D+D  +  +   VG+       TT P 
Sbjct: 126 LDHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGK---DETFTTTPA 185

Query: 182 GYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ---PIREASAARVGNY 241
           G+WA+PARPD+GQVWSF A AP EM +Q     QQ     QQQQ    + EASAARVGNY
Sbjct: 186 GFWAVPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNY 245

Query: 242 LPGHLNLLASLSGGG-GSGRREDDPR 259
           LPGHLNLLASLSGG  GS RRE+DPR
Sbjct: 246 LPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of Lsi04G007920 vs. Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-64
Identity = 155/266 (58.27%), Postives = 173/266 (65.04%), Query Frame = 1


Query: 9   NANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 68
           N   VSNG  ++   N+   N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR
Sbjct: 4   NDGAVSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 63

Query: 69  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTST 128
           ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                   
Sbjct: 64  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS----------------- 123

Query: 129 LSLSRPQALSGPTPFILGKRVRSDDDGKDDGLG-----VGQAVG-SIVGTTGPGGYWAIP 188
                       +PF LGKRV   ++G+  G G     VG  +G S++G  G GG+WA+P
Sbjct: 124 ------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 183

Query: 189 ARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ----------PIREASAARVGN 248
           ARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVGN
Sbjct: 184 ARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVGN 235

Query: 249 YLPG-HLNLLASLSGG-GGSGRREDD 257
           YLPG HLNLLASLSGG  GSGRREDD
Sbjct: 244 YLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of Lsi04G007920 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.3e-32
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 29  NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 88
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 89  RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPQALSGP 141
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

[Close]

BLAST of Lsi04G007920 vs. Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.7e-31
Identity = 73/112 (65.18%), Postives = 87/112 (77.68%), Query Frame = 1


Query: 21  THKNQPSSNGALVVKKP----PSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 80
           T     SS  AL V K     P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 81  QTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTST 129
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGS   S  S ++S+
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSSSS 152

[Close]

BLAST of Lsi04G007920 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.3e-30
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 27  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 86
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 87  EPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTL 130
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

[Close]

BLAST of Lsi04G007920 vs. TrEMBL
Match: A0A0A0KPX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 6.9e-127
Identity = 246/259 (94.98%), Postives = 247/259 (95.37%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSDHT   NGVSNGA IDTHKN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDHT---NGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSASL 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGSASL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASL 120

Query: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYW 180
           SSPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD KDD LGVGQAVGSIVG TGPGGYW
Sbjct: 121 SSPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDDAKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGI+QQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Lsi04G007920 vs. TrEMBL
Match: A0A061E220_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.0e-86
Identity = 190/272 (69.85%), Postives = 212/272 (77.94%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNS+      G +NGA +D  + Q   NG+LVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSE-----GGATNGAIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG   S SL 
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSL- 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD--GKDDG--LGVGQAVGSIVGTTGPG 180
             SST S+ SL   + L GPTPFILGKRVR+DDD  GKDD   + +G  VGSIVG  G G
Sbjct: 121 --SSTISSSSLDH-KPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTG 180

Query: 181 GYWAIPARPDYGQVWSFAAAAPSEMVVQ------SGGISQQ---ASLFAQQQQPIREASA 240
           G+WA+PARPD+GQVWSFA   P EMVVQ      +   +QQ   A+LF QQQQ + EASA
Sbjct: 181 GFWAVPARPDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASA 240

Query: 241 ARVGNYLPGHLNLLASLSGG-GGSGRREDDPR 259
           ARVGNYLPGHLNLLASLSG  GGSGRR++DPR
Sbjct: 241 ARVGNYLPGHLNLLASLSGAPGGSGRRDEDPR 263

[Close]

BLAST of Lsi04G007920 vs. TrEMBL
Match: V4VEH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.3e-85
Identity = 193/270 (71.48%), Postives = 210/270 (77.78%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSD  +N  GVSNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDGATN--GVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G S SLS
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD---GKDDGLGVGQA-VGSIVGTTGP- 180
           S  S+++  +    +   GP PFILGKRVRSDDD   G+D    VG A VG IVG   P 
Sbjct: 121 STVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPG 180

Query: 181 GGYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQ------QQPIREASAAR 240
           GG+WA+PARPD+GQVWSFAAAA  EMVVQ+   SQQ     QQ      QQ + EASAAR
Sbjct: 181 GGFWALPARPDFGQVWSFAAAAAPEMVVQAA--SQQQHHHHQQPHQLFMQQAMGEASAAR 240

Query: 241 VGNYLPGHLNLLASLSGG-GGSGRREDDPR 259
           VGNYLPGHLNLLASLSGG G SGRRE+DPR
Sbjct: 241 VGNYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of Lsi04G007920 vs. TrEMBL
Match: A0A067ENE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.3e-85
Identity = 193/270 (71.48%), Postives = 210/270 (77.78%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSD  +N  GVSNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDGATN--GVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G S SLS
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD---GKDDGLGVGQA-VGSIVGTTGP- 180
           S  S+++  +    +   GP PFILGKRVRSDDD   G+D    VG A VG IVG   P 
Sbjct: 121 STVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPG 180

Query: 181 GGYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQ------QQPIREASAAR 240
           GG+WA+PARPD+GQVWSFAAAA  EMVVQ+   SQQ     QQ      QQ + EASAAR
Sbjct: 181 GGFWALPARPDFGQVWSFAAAAAPEMVVQAA--SQQQHHHHQQPHQLFMQQAMGEASAAR 240

Query: 241 VGNYLPGHLNLLASLSGG-GGSGRREDDPR 259
           VGNYLPGHLNLLASLSGG G SGRRE+DPR
Sbjct: 241 VGNYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of Lsi04G007920 vs. TrEMBL
Match: A0A067LCW2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10156 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 9.5e-84
Identity = 191/280 (68.21%), Postives = 217/280 (77.50%), Query Frame = 1


Query: 1   MSNSDHTSN-------ANGVSNGAAIDTHKNQP-SSNGALVVKKPPSKDRHSKVDGRGRR 60
           MSNSD  +N         GV+NGA ID+ + QP  +NGAL V+KPPSKDR SKVDGRGRR
Sbjct: 1   MSNSDSAANNGGGGGGGGGVTNGAIIDSQRQQPPGTNGALAVEKPPSKDRQSKVDGRGRR 60

Query: 61  IRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRG 120
           IRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVR 
Sbjct: 61  IRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRA 120

Query: 121 NGGSASLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD---GKDD-GLGVGQAVGS 180
            G S SLSS SS T++ ++   + L GPTPFILGKRVR +DD   GKDD G+ VG  VGS
Sbjct: 121 GGNSNSLSSISSVTNSSAMDH-KPLLGPTPFILGKRVRPEDDNNGGKDDSGVSVGPTVGS 180

Query: 181 IVGT-TGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ------- 240
           +VGT   PGG+WA+PARPD+   W F AAAP +MVVQS   +QQ+SLF QQQQ       
Sbjct: 181 LVGTAAAPGGFWAVPARPDF---WGF-AAAPPDMVVQSSVAAQQSSLFVQQQQAAAAAAA 240

Query: 241 -PIREASAARVGNYLPGHLNLLASLSGG-GGSGRREDDPR 259
             + EASAARVGNYLPGHLNLLASLSGG G SGRRE++PR
Sbjct: 241 AAMGEASAARVGNYLPGHLNLLASLSGGPGSSGRREEEPR 275

[Close]

BLAST of Lsi04G007920 vs. TAIR10
Match: AT5G23280.1 (AT5G23280.1 TCP family transcription factor )

HSP 1 Score: 265.4 bits (677), Expect = 3.7e-71
Identity = 164/266 (61.65%), Postives = 192/266 (72.18%), Query Frame = 1


Query: 2   SNSDHTSNANGV---SNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPII 61
           +N+++ +N +G+   SNGA I+    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPII
Sbjct: 6   NNNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPII 65

Query: 62  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSAS 121
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   S S
Sbjct: 66  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTS 125

Query: 122 LSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKD--DGLGVGQAVGSIVGTTGPG 181
           L    ++           L G +PFILGKRVR+D+D  +  +   VG+       TT P 
Sbjct: 126 LDHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGK---DETFTTTPA 185

Query: 182 GYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ---PIREASAARVGNY 241
           G+WA+PARPD+GQVWSF A AP EM +Q     QQ     QQQQ    + EASAARVGNY
Sbjct: 186 GFWAVPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNY 245

Query: 242 LPGHLNLLASLSGGG-GSGRREDDPR 259
           LPGHLNLLASLSGG  GS RRE+DPR
Sbjct: 246 LPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of Lsi04G007920 vs. TAIR10
Match: AT5G08330.1 (AT5G08330.1 TCP family transcription factor )

HSP 1 Score: 247.7 bits (631), Expect = 8.0e-66
Identity = 155/266 (58.27%), Postives = 173/266 (65.04%), Query Frame = 1


Query: 9   NANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 68
           N   VSNG  ++   N+   N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR
Sbjct: 4   NDGAVSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 63

Query: 69  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTST 128
           ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                   
Sbjct: 64  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS----------------- 123

Query: 129 LSLSRPQALSGPTPFILGKRVRSDDDGKDDGLG-----VGQAVG-SIVGTTGPGGYWAIP 188
                       +PF LGKRV   ++G+  G G     VG  +G S++G  G GG+WA+P
Sbjct: 124 ------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 183

Query: 189 ARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ----------PIREASAARVGN 248
           ARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVGN
Sbjct: 184 ARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVGN 235

Query: 249 YLPG-HLNLLASLSGG-GGSGRREDD 257
           YLPG HLNLLASLSGG  GSGRREDD
Sbjct: 244 YLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of Lsi04G007920 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 138.7 bits (348), Expect = 5.2e-33
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 29  NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 88
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 89  RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPQALSGP 141
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

[Close]

BLAST of Lsi04G007920 vs. TAIR10
Match: AT1G72010.1 (AT1G72010.1 TCP family transcription factor )

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-32
Identity = 73/112 (65.18%), Postives = 87/112 (77.68%), Query Frame = 1


Query: 21  THKNQPSSNGALVVKKP----PSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 80
           T     SS  AL V K     P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 81  QTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTST 129
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGS   S  S ++S+
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSSSS 152

[Close]

BLAST of Lsi04G007920 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 27  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 86
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 87  EPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTL 130
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: gi|659090197|ref|XP_008445886.1| (PREDICTED: transcription factor TCP7-like [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 6.9e-128
Identity = 248/259 (95.75%), Postives = 249/259 (96.14%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSDHT   NGVSN AAID+HKNQ SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDHT---NGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSASL 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGSASL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASL 120

Query: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYW 180
           SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD KDDGLGVGQAVGSIVG TGPGGYW
Sbjct: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDAKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: gi|449451743|ref|XP_004143620.1| (PREDICTED: transcription factor TCP7-like [Cucumis sativus])

HSP 1 Score: 461.5 bits (1186), Expect = 1.0e-126
Identity = 246/259 (94.98%), Postives = 247/259 (95.37%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSDHT   NGVSNGA IDTHKN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDHT---NGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSASL 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGSASL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASL 120

Query: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYW 180
           SSPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD KDD LGVGQAVGSIVG TGPGGYW
Sbjct: 121 SSPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDDAKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGI+QQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: gi|1021569620|ref|XP_016176021.1| (PREDICTED: transcription factor TCP7-like [Arachis ipaensis])

HSP 1 Score: 338.6 bits (867), Expect = 9.7e-90
Identity = 200/274 (72.99%), Postives = 223/274 (81.39%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKN---QPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPI 60
           MSN+D TSNA  V+N   IDTH++   Q  +NGALVVKKPPSKDRHSKVDGRGRRIRMPI
Sbjct: 1   MSNTDGTSNA--VTN---IDTHRHHSQQQPTNGALVVKKPPSKDRHSKVDGRGRRIRMPI 60

Query: 61  ICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSA 120
           ICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FSSVS+SVR  GG+ 
Sbjct: 61  ICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVR--GGAG 120

Query: 121 SLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD--GKDDGLGVGQAVGSIVGTTGP 180
           SLSSPSST++  SL   + L  PTPFILGKR+R+DDD   KDDG+ VG AVGS+VG   P
Sbjct: 121 SLSSPSSTSAASSLDH-KPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSLVGPGAP 180

Query: 181 GGYWAIPARPDYGQVWSFAAAA-PSEMVVQSGGIS----QQASLFA-----QQQQPIREA 240
            G WA+PARPD+GQ+WSFA AA P EMVVQS  +S    QQASLF      QQQQ + EA
Sbjct: 181 AGLWALPARPDFGQIWSFATAAPPPEMVVQSAAVSVSQQQQASLFVHHQHQQQQQAMGEA 240

Query: 241 SAARVGNYLPGHLNLLASLSGG-GGSGRREDDPR 259
           SAAR+GNYLPGHLNLLASLSGG G SGRR+D+PR
Sbjct: 241 SAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR 266

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: gi|590689527|ref|XP_007043253.1| (TCP family transcription factor [Theobroma cacao])

HSP 1 Score: 327.0 bits (837), Expect = 2.9e-86
Identity = 190/272 (69.85%), Postives = 212/272 (77.94%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNS+      G +NGA +D  + Q   NG+LVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSE-----GGATNGAIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG   S SL 
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSL- 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD--GKDDG--LGVGQAVGSIVGTTGPG 180
             SST S+ SL   + L GPTPFILGKRVR+DDD  GKDD   + +G  VGSIVG  G G
Sbjct: 121 --SSTISSSSLDH-KPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTG 180

Query: 181 GYWAIPARPDYGQVWSFAAAAPSEMVVQ------SGGISQQ---ASLFAQQQQPIREASA 240
           G+WA+PARPD+GQVWSFA   P EMVVQ      +   +QQ   A+LF QQQQ + EASA
Sbjct: 181 GFWAVPARPDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASA 240

Query: 241 ARVGNYLPGHLNLLASLSGG-GGSGRREDDPR 259
           ARVGNYLPGHLNLLASLSG  GGSGRR++DPR
Sbjct: 241 ARVGNYLPGHLNLLASLSGAPGGSGRRDEDPR 263

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: gi|729301586|ref|XP_010521856.1| (PREDICTED: transcription factor TCP7 [Tarenaya hassleriana])

HSP 1 Score: 324.7 bits (831), Expect = 1.5e-85
Identity = 193/274 (70.44%), Postives = 211/274 (77.01%), Query Frame = 1


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSS--NGALVVKKPPSKDRHSKVDGRGRRIRMPII 60
           MSN D   NA  VSNGA ID H+   +S  NGAL VKKPPSKDRHSKVDGRGRRIRMPII
Sbjct: 1   MSNPDGAGNA--VSNGAMIDRHRQNSTSAGNGALAVKKPPSKDRHSKVDGRGRRIRMPII 60

Query: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSAS 120
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+SVRG G S S
Sbjct: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSVRGGGNSTS 120

Query: 121 LSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD----GKDDG--LGVGQAVGSIVGT 180
           LSS SS          + LSGP PFILGKRVR+++D    GKDDG    VG  +GS VG+
Sbjct: 121 LSSFSSLDH-------KPLSGPAPFILGKRVRAEEDSGGGGKDDGGVTSVGHTMGSFVGS 180

Query: 181 TGPGGYWAIPARPDYGQVWSFAAA--APSEMVVQSGGISQQ-ASLFAQQQQ----PIREA 240
             P G+WA+PARPD+GQ WSFAAA  AP EMV+QS  I+QQ A+LF  QQQ     + EA
Sbjct: 181 ASPAGFWAVPARPDFGQFWSFAAAAGAPPEMVLQSASITQQTAALFVHQQQQAAAAMGEA 240

Query: 241 SAARVGNYLPGHLNLLASLSGG-GGSGRREDDPR 259
           SAARVGNYLPGHLNLLASLSGG  GS RREDDPR
Sbjct: 241 SAARVGNYLPGHLNLLASLSGGTAGSNRREDDPR 265

The following BLAST results are available for this feature:

BLAST of Lsi04G007920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP7_ARATH	6.6e-70	61.65	Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1	[more]
TCP21_ARATH	1.4e-64	58.27	Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1	[more]
TCP14_ARATH	9.3e-32	63.25	Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1	[more]
TCP22_ARATH	2.7e-31	65.18	Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1	[more]
TCP8_ARATH	2.3e-30	66.99	Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1	[more]

BLAST of Lsi04G007920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX7_CUCSA	6.9e-127	94.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1	[more]
A0A061E220_THECC	2.0e-86	69.85	TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1	[more]
V4VEH8_9ROSI	1.3e-85	71.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1	[more]
A0A067ENE6_CITSI	1.3e-85	71.48	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1	[more]
A0A067LCW2_JATCU	9.5e-84	68.21	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10156 PE=4 SV=1	[more]

BLAST of Lsi04G007920 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23280.1	3.7e-71	61.65	TCP family transcription factor	[more]
AT5G08330.1	8.0e-66	58.27	TCP family transcription factor	[more]
AT3G47620.1	5.2e-33	63.25	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G72010.1	1.5e-32	65.18	TCP family transcription factor	[more]
AT1G58100.1	1.3e-31	66.99	TCP family transcription factor	[more]

BLAST of Lsi04G007920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090197\|ref\|XP_008445886.1\|	6.9e-128	95.75	PREDICTED: transcription factor TCP7-like [Cucumis melo]	[more]
gi\|449451743\|ref\|XP_004143620.1\|	1.0e-126	94.98	PREDICTED: transcription factor TCP7-like [Cucumis sativus]	[more]
gi\|1021569620\|ref\|XP_016176021.1\|	9.7e-90	72.99	PREDICTED: transcription factor TCP7-like [Arachis ipaensis]	[more]
gi\|590689527\|ref\|XP_007043253.1\|	2.9e-86	69.85	TCP family transcription factor [Theobroma cacao]	[more]
gi\|729301586\|ref\|XP_010521856.1\|	1.5e-85	70.44	PREDICTED: transcription factor TCP7 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G007920.1	Lsi04G007920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 39..126 score: 3.2
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 39..93 score: 28
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 1..154 score: 2.5
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 1..154 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G007920	Csa5G175170	Cucumber (Chinese Long) v2	culsiB363
Lsi04G007920	CSPI05G08570	Wild cucumber (PI 183967)	cpilsiB366
Lsi04G007920	Cucsa.166230	Cucumber (Gy14) v1	cgylsiB276
Lsi04G007920	CmaCh18G008100	Cucurbita maxima (Rimu)	cmalsiB384
Lsi04G007920	CmaCh04G012590	Cucurbita maxima (Rimu)	cmalsiB676
Lsi04G007920	CmoCh04G013310	Cucurbita moschata (Rifu)	cmolsiB669
Lsi04G007920	CmoCh18G008120	Cucurbita moschata (Rifu)	cmolsiB369
Lsi04G007920	Cla020050	Watermelon (97103) v1	lsiwmB331
Lsi04G007920	MELO3C011754	Melon (DHL92) v3.5.1	lsimeB281
Lsi04G007920	ClCG02G014110	Watermelon (Charleston Gray)	lsiwcgB275
Lsi04G007920	MELO3C025049.2	Melon (DHL92) v3.6.1	lsimedB295
Lsi04G007920	MELO3C011754.2	Melon (DHL92) v3.6.1	lsimedB297
Lsi04G007920	Cla97C02G039860	Watermelon (97103) v2	lsiwmbB275
Lsi04G007920	Bhi07G000917	Wax gourd	lsiwgoB382
Lsi04G007920	Cp4.1LG01g10190	Cucurbita pepo (Zucchini)	cpelsiB358
Lsi04G007920	Cp4.1LG09g04990	Cucurbita pepo (Zucchini)	cpelsiB031
Lsi04G007920	CsGy5G005950	Cucumber (Gy14) v2	cgyblsiB331
Lsi04G007920	Carg02051	Silver-seed gourd	carlsiB765
Lsi04G007920	Carg17778	Silver-seed gourd	carlsiB434
Lsi04G007920	Carg14457	Silver-seed gourd	carlsiB662
Lsi04G007920	CsaV3_5G006010	Cucumber (Chinese Long) v3	cuclsiB387

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi04G007920	Lsi09G008630	Bottle gourd (USVL1VR-Ls)	lsilsiB004

The following block(s) are covering this gene:

None