CmoCh18G008120 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G008120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TCP family transcription factor
Location	Cmo_Chr18 : 9545980 .. 9546672 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTGGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCCATTATTGCTGCCACCGGCACCGGCACTACTCCCGCTAATTTCTCTTCCATCTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGCCCCCAGCCGTTCATTCTCGGGAAGCGTGTCAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGAGGATTTCTCAGCCGGCGTCGTTGTTTGCTCAACAGCAACAGCCGATTAGAGAAGCATCGGCAGCAAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGACTGTCGTTGA

mRNA sequence

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTGGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCCATTATTGCTGCCACCGGCACCGGCACTACTCCCGCTAATTTCTCTTCCATCTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGCCCCCAGCCGTTCATTCTCGGGAAGCGTGTCAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGAGGATTTCTCAGCCGGCGTCGTTGTTTGCTCAACAGCAACAGCCGATTAGAGAAGCATCGGCAGCAAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGACTGTCGTTGA

Coding sequence (CDS)

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTGGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCCATTATTGCTGCCACCGGCACCGGCACTACTCCCGCTAATTTCTCTTCCATCTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGCCCCCAGCCGTTCATTCTCGGGAAGCGTGTCAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGAGGATTTCTCAGCCGGCGTCGTTGTTTGCTCAACAGCAACAGCCGATTAGAGAAGCATCGGCAGCAAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGACTGTCGTTGA

Homology

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BLAST of CmoCh18G008120 vs. Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.9e-68
Identity = 154/239 (64.44%), Postives = 175/239 (73.22%), Query Frame = 1


Query: 9   SSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 68
           SSNGA I+    QPS    + VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGH
Sbjct: 20  SSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 79

Query: 69  KSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQ 128
           KSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG  +S SL    ++L L    
Sbjct: 80  KSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSLDHKPTSL-LGGTS 139

Query: 129 PFILGKRVRADDDG---------GTDDGLGVGPSGYWAIPARPDYGQVWSFAAA-----A 188
           PFILGKRVRAD+D          G D+     P+G+WA+PARPD+GQVWSFA A      
Sbjct: 140 PFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWAVPARPDFGQVWSFAGAPQEMFL 199

Query: 189 AAEQRISQPASLFAQQQQ--PIREASAARVGNYLPGHLNLLASLSGGG-GAGRREDDCR 231
             +    QP  +  QQQQ   + EASAARVGNYLPGHLNLLASLSGG  G+ RRE+D R
Sbjct: 200 QQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of CmoCh18G008120 vs. Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-61
Identity = 148/250 (59.20%), Postives = 161/250 (64.40%), Query Frame = 1


Query: 10  SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 69
           SNG  ++   N+   N   AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK
Sbjct: 9   SNGIIVEQTSNKGPLN---AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 68

Query: 70  SDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQP 129
           SDGQTIEWLLRQAEPSIIAATGTGTTPA+F                    ST SLS   P
Sbjct: 69  SDGQTIEWLLRQAEPSIIAATGTGTTPASF--------------------STASLSTSSP 128

Query: 130 FILGKRV----RADDDGGTDDGL------------GVGPSGYWAIPARPDYGQVWSFAAA 189
           F LGKRV      +  GG   GL            G G  G+WA+PARPD+GQVWSFA  
Sbjct: 129 FTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFATG 188

Query: 190 AAAEQ---RISQPASLFAQQQQ----------PIREASAARVGNYLPG-HLNLLASLSGG 229
           A  E    +  QPA+LF + QQ           + EASAARVGNYLPG HLNLLASLSGG
Sbjct: 189 APPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGG 235

[Close]

BLAST of CmoCh18G008120 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.5e-33
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 1


Query: 25  NGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 84
           +  +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 85  RQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSS 118
           +QAEPS+IAATGTGT PANF+S+++S+R +GSS SL S
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPS 199

[Close]

BLAST of CmoCh18G008120 vs. Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.3e-32
Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 1


Query: 17  THKNQPSSNGALAVKKP----PSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 76
           T     SS  ALAV K     P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 77  QTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQPFIL 136
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  G S   S  +   S S P  F  
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASK--SSSSPLSFHS 160

Query: 137 GKRVRADDDGGTDDGLGVGPS 154
                 +D+ GT +G  V PS
Sbjct: 161 TGMSLYEDNNGT-NGSSVDPS 178

[Close]

BLAST of CmoCh18G008120 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30
Identity = 67/98 (68.37%), Postives = 81/98 (82.65%), Query Frame = 1


Query: 23  SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 82
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 83  EPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 121
           EP+I+AATGTGT PANFS++S+S+R +GS+ S   + S
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPSKS 145

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BLAST of CmoCh18G008120 vs. TrEMBL
Match: A0A0A0KPX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 6.2e-95
Identity = 206/257 (80.16%), Postives = 212/257 (82.49%), Query Frame = 1


Query: 1   MSNSE-TADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+ T   SNGA IDTHKN  SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN-GSSASL--- 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGN G SASL   
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQ------PFILGKRVRADDDGGTDDGLGV-----------GPSGYWAI 180
           SSTTSTLSLSRPQ      PFILGKRVR+DDD   DD LGV           GP GYWAI
Sbjct: 121 SSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYWAI 180

Query: 181 PARPDYGQVWSFAAAAAAEQ-----RISQPASLFAQQQQPIREASAARVGNYLPGHLNLL 231
           PARPDYGQVWSFAAAA +E       I+Q ASLFAQQQQPIREASAARVGNYLPGHLNLL
Sbjct: 181 PARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLNLL 240

[Close]

BLAST of CmoCh18G008120 vs. TrEMBL
Match: V4VEH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.1e-78
Identity = 177/268 (66.04%), Postives = 197/268 (73.51%), Query Frame = 1


Query: 1   MSNSETADS--SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60
           MSNS+ A +  SNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAAR
Sbjct: 1   MSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60

Query: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSST 120
           VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG G+S SLSST
Sbjct: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSST 120

Query: 121 TSTLSLSR---------PQPFILGKRVRADDDG--GTDDGLGVGPS-------------G 180
            S+ ++S          P PFILGKRVR+DDDG  G D    VGP+             G
Sbjct: 121 VSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAAAEQRI-----------SQPASLFAQQQQPIREASAARVG 231
           +WA+PARPD+GQVWSFAAAAA E  +            QP  LF   QQ + EASAARVG
Sbjct: 181 FWALPARPDFGQVWSFAAAAAPEMVVQAASQQQHHHHQQPHQLF--MQQAMGEASAARVG 240

[Close]

BLAST of CmoCh18G008120 vs. TrEMBL
Match: A0A067ENE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.1e-78
Identity = 177/268 (66.04%), Postives = 197/268 (73.51%), Query Frame = 1


Query: 1   MSNSETADS--SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60
           MSNS+ A +  SNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAAR
Sbjct: 1   MSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60

Query: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSST 120
           VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG G+S SLSST
Sbjct: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSST 120

Query: 121 TSTLSLSR---------PQPFILGKRVRADDDG--GTDDGLGVGPS-------------G 180
            S+ ++S          P PFILGKRVR+DDDG  G D    VGP+             G
Sbjct: 121 VSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAAAEQRI-----------SQPASLFAQQQQPIREASAARVG 231
           +WA+PARPD+GQVWSFAAAAA E  +            QP  LF   QQ + EASAARVG
Sbjct: 181 FWALPARPDFGQVWSFAAAAAPEMVVQAASQQQHHHHQQPHQLF--MQQAMGEASAARVG 240

[Close]

BLAST of CmoCh18G008120 vs. TrEMBL
Match: A0A061E220_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-77
Identity = 174/264 (65.91%), Postives = 193/264 (73.11%), Query Frame = 1


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSE   ++NGA +D  + Q   NG+L VKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSE-GGATNGAIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG  +S SLSST S
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSLSSTIS 120

Query: 121 TLSLSR-----PQPFILGKRVRADDDGGTDDGLGV--------------GPSGYWAIPAR 180
           + SL       P PFILGKRVRADDD    D  GV              G  G+WA+PAR
Sbjct: 121 SSSLDHKPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGGFWAVPAR 180

Query: 181 PDYGQVWSF------------AAAAAAEQRISQP--ASLFAQQQQPIREASAARVGNYLP 231
           PD+GQVWSF            AAAAAA     QP  A+LF QQQQ + EASAARVGNYLP
Sbjct: 181 PDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAARVGNYLP 240

[Close]

BLAST of CmoCh18G008120 vs. TrEMBL
Match: A0A0D2SKJ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G211900 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.9e-76
Identity = 172/257 (66.93%), Postives = 201/257 (78.21%), Query Frame = 1


Query: 1   MSNSETADSSNGAAIDTHKNQ-PSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNSETA ++NG+ +D  ++Q P++NG+LAVKKPP+KDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSETA-ATNGSLMDPQRHQAPAANGSLAVKKPPTKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTT 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+S+RG  +S SLSSTT
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSLRG-ANSTSLSSTT 120

Query: 121 ST----LSLSRPQPFILGKRVRADDD-------GGTDDGLGVG---------PSGYWAIP 180
           S+      L  P PFILGKRVR+DDD       GG   G GVG         P G+WA+P
Sbjct: 121 SSSLDHKPLLGPTPFILGKRVRSDDDNAGKDDSGGLTVGPGVGSIVGPNGTHPGGFWALP 180

Query: 181 ARPDYGQVWSFAA-------AAAAEQRISQPASLFAQQQQPIREASAARVGNYLPGHLNL 229
           ARPD+GQ+WSFAA         AA Q+ +  A+LF QQQQ + EASAARVGNYLPGHLNL
Sbjct: 181 ARPDFGQLWSFAAPPPPDMVVQAAAQQPAAAAALFVQQQQAMGEASAARVGNYLPGHLNL 240

[Close]

BLAST of CmoCh18G008120 vs. TAIR10
Match: AT5G23280.1 (AT5G23280.1 TCP family transcription factor )

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-69
Identity = 154/239 (64.44%), Postives = 175/239 (73.22%), Query Frame = 1


Query: 9   SSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 68
           SSNGA I+    QPS    + VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGH
Sbjct: 20  SSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 79

Query: 69  KSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQ 128
           KSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG  +S SL    ++L L    
Sbjct: 80  KSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSLDHKPTSL-LGGTS 139

Query: 129 PFILGKRVRADDDG---------GTDDGLGVGPSGYWAIPARPDYGQVWSFAAA-----A 188
           PFILGKRVRAD+D          G D+     P+G+WA+PARPD+GQVWSFA A      
Sbjct: 140 PFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWAVPARPDFGQVWSFAGAPQEMFL 199

Query: 189 AAEQRISQPASLFAQQQQ--PIREASAARVGNYLPGHLNLLASLSGGG-GAGRREDDCR 231
             +    QP  +  QQQQ   + EASAARVGNYLPGHLNLLASLSGG  G+ RRE+D R
Sbjct: 200 QQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of CmoCh18G008120 vs. TAIR10
Match: AT5G08330.1 (AT5G08330.1 TCP family transcription factor )

HSP 1 Score: 237.3 bits (604), Expect = 9.6e-63
Identity = 148/250 (59.20%), Postives = 161/250 (64.40%), Query Frame = 1


Query: 10  SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 69
           SNG  ++   N+   N   AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK
Sbjct: 9   SNGIIVEQTSNKGPLN---AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 68

Query: 70  SDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQP 129
           SDGQTIEWLLRQAEPSIIAATGTGTTPA+F                    ST SLS   P
Sbjct: 69  SDGQTIEWLLRQAEPSIIAATGTGTTPASF--------------------STASLSTSSP 128

Query: 130 FILGKRV----RADDDGGTDDGL------------GVGPSGYWAIPARPDYGQVWSFAAA 189
           F LGKRV      +  GG   GL            G G  G+WA+PARPD+GQVWSFA  
Sbjct: 129 FTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFATG 188

Query: 190 AAAEQ---RISQPASLFAQQQQ----------PIREASAARVGNYLPG-HLNLLASLSGG 229
           A  E    +  QPA+LF + QQ           + EASAARVGNYLPG HLNLLASLSGG
Sbjct: 189 APPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGG 235

[Close]

BLAST of CmoCh18G008120 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 142.1 bits (357), Expect = 4.2e-34
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 1


Query: 25  NGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 84
           +  +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 85  RQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSS 118
           +QAEPS+IAATGTGT PANF+S+++S+R +GSS SL S
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPS 199

[Close]

BLAST of CmoCh18G008120 vs. TAIR10
Match: AT1G72010.1 (AT1G72010.1 TCP family transcription factor )

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-33
Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 1


Query: 17  THKNQPSSNGALAVKKP----PSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 76
           T     SS  ALAV K     P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 77  QTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQPFIL 136
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  G S   S  +   S S P  F  
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASK--SSSSPLSFHS 160

Query: 137 GKRVRADDDGGTDDGLGVGPS 154
                 +D+ GT +G  V PS
Sbjct: 161 TGMSLYEDNNGT-NGSSVDPS 178

[Close]

BLAST of CmoCh18G008120 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 134.4 bits (337), Expect = 8.8e-32
Identity = 67/98 (68.37%), Postives = 81/98 (82.65%), Query Frame = 1


Query: 23  SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 82
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 83  EPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 121
           EP+I+AATGTGT PANFS++S+S+R +GS+ S   + S
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPSKS 145

[Close]

BLAST of CmoCh18G008120 vs. NCBI nr
Match: gi|659090197|ref|XP_008445886.1| (PREDICTED: transcription factor TCP7-like [Cucumis melo])

HSP 1 Score: 359.8 bits (922), Expect = 3.6e-96
Identity = 209/257 (81.32%), Postives = 215/257 (83.66%), Query Frame = 1


Query: 1   MSNSE-TADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+ T   SN AAID+HKNQ SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN-GSSASL--- 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGN G SASL   
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQ------PFILGKRVRADDDGGTDDGLGV-----------GPSGYWAI 180
           SSTTSTLSLSRPQ      PFILGKRVR+DDD   DDGLGV           GP GYWAI
Sbjct: 121 SSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-AKDDGLGVGQAVGSIVGPTGPGGYWAI 180

Query: 181 PARPDYGQVWSFAAAAAAEQ-----RISQPASLFAQQQQPIREASAARVGNYLPGHLNLL 231
           PARPDYGQVWSFAAAA +E       ISQ ASLFAQQQQPIREASAARVGNYLPGHLNLL
Sbjct: 181 PARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLL 240

[Close]

BLAST of CmoCh18G008120 vs. NCBI nr
Match: gi|449451743|ref|XP_004143620.1| (PREDICTED: transcription factor TCP7-like [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 9.0e-95
Identity = 206/257 (80.16%), Postives = 212/257 (82.49%), Query Frame = 1


Query: 1   MSNSE-TADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+ T   SNGA IDTHKN  SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN-GSSASL--- 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGN G SASL   
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQ------PFILGKRVRADDDGGTDDGLGV-----------GPSGYWAI 180
           SSTTSTLSLSRPQ      PFILGKRVR+DDD   DD LGV           GP GYWAI
Sbjct: 121 SSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYWAI 180

Query: 181 PARPDYGQVWSFAAAAAAEQ-----RISQPASLFAQQQQPIREASAARVGNYLPGHLNLL 231
           PARPDYGQVWSFAAAA +E       I+Q ASLFAQQQQPIREASAARVGNYLPGHLNLL
Sbjct: 181 PARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLNLL 240

[Close]

BLAST of CmoCh18G008120 vs. NCBI nr
Match: gi|567890197|ref|XP_006437619.1| (hypothetical protein CICLE_v10032441mg [Citrus clementina])

HSP 1 Score: 299.3 bits (765), Expect = 5.8e-78
Identity = 177/268 (66.04%), Postives = 197/268 (73.51%), Query Frame = 1


Query: 1   MSNSETADS--SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60
           MSNS+ A +  SNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAAR
Sbjct: 1   MSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60

Query: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSST 120
           VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG G+S SLSST
Sbjct: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSST 120

Query: 121 TSTLSLSR---------PQPFILGKRVRADDDG--GTDDGLGVGPS-------------G 180
            S+ ++S          P PFILGKRVR+DDDG  G D    VGP+             G
Sbjct: 121 VSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAAAEQRI-----------SQPASLFAQQQQPIREASAARVG 231
           +WA+PARPD+GQVWSFAAAAA E  +            QP  LF   QQ + EASAARVG
Sbjct: 181 FWALPARPDFGQVWSFAAAAAPEMVVQAASQQQHHHHQQPHQLF--MQQAMGEASAARVG 240

[Close]

BLAST of CmoCh18G008120 vs. NCBI nr
Match: gi|590689527|ref|XP_007043253.1| (TCP family transcription factor [Theobroma cacao])

HSP 1 Score: 297.0 bits (759), Expect = 2.9e-77
Identity = 174/264 (65.91%), Postives = 193/264 (73.11%), Query Frame = 1


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSE   ++NGA +D  + Q   NG+L VKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSE-GGATNGAIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG  +S SLSST S
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSLSSTIS 120

Query: 121 TLSLSR-----PQPFILGKRVRADDDGGTDDGLGV--------------GPSGYWAIPAR 180
           + SL       P PFILGKRVRADDD    D  GV              G  G+WA+PAR
Sbjct: 121 SSSLDHKPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGGFWAVPAR 180

Query: 181 PDYGQVWSF------------AAAAAAEQRISQP--ASLFAQQQQPIREASAARVGNYLP 231
           PD+GQVWSF            AAAAAA     QP  A+LF QQQQ + EASAARVGNYLP
Sbjct: 181 PDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAARVGNYLP 240

[Close]

BLAST of CmoCh18G008120 vs. NCBI nr
Match: gi|823160004|ref|XP_012479842.1| (PREDICTED: transcription factor TCP21 [Gossypium raimondii])

HSP 1 Score: 293.1 bits (749), Expect = 4.2e-76
Identity = 172/257 (66.93%), Postives = 201/257 (78.21%), Query Frame = 1


Query: 1   MSNSETADSSNGAAIDTHKNQ-PSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNSETA ++NG+ +D  ++Q P++NG+LAVKKPP+KDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSETA-ATNGSLMDPQRHQAPAANGSLAVKKPPTKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTT 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+S+RG  +S SLSSTT
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSLRG-ANSTSLSSTT 120

Query: 121 ST----LSLSRPQPFILGKRVRADDD-------GGTDDGLGVG---------PSGYWAIP 180
           S+      L  P PFILGKRVR+DDD       GG   G GVG         P G+WA+P
Sbjct: 121 SSSLDHKPLLGPTPFILGKRVRSDDDNAGKDDSGGLTVGPGVGSIVGPNGTHPGGFWALP 180

Query: 181 ARPDYGQVWSFAA-------AAAAEQRISQPASLFAQQQQPIREASAARVGNYLPGHLNL 229
           ARPD+GQ+WSFAA         AA Q+ +  A+LF QQQQ + EASAARVGNYLPGHLNL
Sbjct: 181 ARPDFGQLWSFAAPPPPDMVVQAAAQQPAAAAALFVQQQQAMGEASAARVGNYLPGHLNL 240

The following BLAST results are available for this feature:

BLAST of CmoCh18G008120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP7_ARATH	1.9e-68	64.44	Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1	[more]
TCP21_ARATH	1.7e-61	59.20	Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1	[more]
TCP14_ARATH	7.5e-33	72.45	Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1	[more]
TCP22_ARATH	6.3e-32	58.16	Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1	[more]
TCP8_ARATH	1.6e-30	68.37	Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1	[more]

BLAST of CmoCh18G008120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX7_CUCSA	6.2e-95	80.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1	[more]
V4VEH8_9ROSI	4.1e-78	66.04	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1	[more]
A0A067ENE6_CITSI	4.1e-78	66.04	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1	[more]
A0A061E220_THECC	2.0e-77	65.91	TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1	[more]
A0A0D2SKJ2_GOSRA	2.9e-76	66.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G211900 PE=4 SV=1	[more]

BLAST of CmoCh18G008120 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23280.1	1.1e-69	64.44	TCP family transcription factor	[more]
AT5G08330.1	9.6e-63	59.20	TCP family transcription factor	[more]
AT3G47620.1	4.2e-34	72.45	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G72010.1	3.6e-33	58.16	TCP family transcription factor	[more]
AT1G58100.1	8.8e-32	68.37	TCP family transcription factor	[more]

BLAST of CmoCh18G008120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090197\|ref\|XP_008445886.1\|	3.6e-96	81.32	PREDICTED: transcription factor TCP7-like [Cucumis melo]	[more]
gi\|449451743\|ref\|XP_004143620.1\|	9.0e-95	80.16	PREDICTED: transcription factor TCP7-like [Cucumis sativus]	[more]
gi\|567890197\|ref\|XP_006437619.1\|	5.8e-78	66.04	hypothetical protein CICLE_v10032441mg [Citrus clementina]	[more]
gi\|590689527\|ref\|XP_007043253.1\|	2.9e-77	65.91	TCP family transcription factor [Theobroma cacao]	[more]
gi\|823160004\|ref\|XP_012479842.1\|	4.2e-76	66.93	PREDICTED: transcription factor TCP21 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G008120.1	CmoCh18G008120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 35..127 score: 6.7
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 35..89 score: 28
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 1..153 score: 7.0
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 1..153 score: 7.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G008120	CmaCh18G008100	Cucurbita maxima (Rimu)	cmacmoB406
CmoCh18G008120	CmaCh04G012590	Cucurbita maxima (Rimu)	cmacmoB706
CmoCh18G008120	Cla020050	Watermelon (97103) v1	cmowmB390
CmoCh18G008120	MELO3C011754	Melon (DHL92) v3.5.1	cmomeB348
CmoCh18G008120	ClCG02G014110	Watermelon (Charleston Gray)	cmowcgB349
CmoCh18G008120	Lsi04G007100	Bottle gourd (USVL1VR-Ls)	cmolsiB366
CmoCh18G008120	Lsi04G007920	Bottle gourd (USVL1VR-Ls)	cmolsiB369
CmoCh18G008120	Cp4.1LG09g04990	Cucurbita pepo (Zucchini)	cmocpeB376
CmoCh18G008120	Cp4.1LG01g10190	Cucurbita pepo (Zucchini)	cmocpeB392
CmoCh18G008120	MELO3C011835.2	Melon (DHL92) v3.6.1	cmomedB397
CmoCh18G008120	MELO3C011754.2	Melon (DHL92) v3.6.1	cmomedB399
CmoCh18G008120	CsaV3_5G029900	Cucumber (Chinese Long) v3	cmocucB0489
CmoCh18G008120	Bhi07G000917	Wax gourd	cmowgoB0542
CmoCh18G008120	Carg14457	Silver-seed gourd	carcmoB0984
CmoCh18G008120	Carg02051	Silver-seed gourd	carcmoB1135

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh18G008120	CmoCh04G013310	Cucurbita moschata (Rifu)	cmocmoB336

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G008120	Wax gourd	cmowgoB0539