CmoCh04G013310 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G013310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TCP family transcription factor
Location	Cmo_Chr04 : 6776828 .. 6780093 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGGACTTACAAATGGTTGGTAATTTGATTACACGGCAAAGAAAGAGAGTAGTAACCTTTCTTTCTCGCCATATACGTATATGCTCTGTAGATTCCCAAGGACGGCCCGCTTACCAGAGCGGCGCTGCTCGCTCCCATACATTAAAACACCCACTCCTGCATCTCATCAACATTTCTTTTAGTAGGGATGAGAATTTGGGTAATTTTCTTGTTTTCCATATGAATTCCCTCATTTATTGTCTCCCAATAATACCTATGAGTTTTGTACAGGAGATGCATCAACATGCGAAGCAGGGGGGCCGGATCCACTGCGCAGTCATGTAATCTTTCTGGGAGTTTGGAGCCCAATCAATCGGGTCGTGTAGGTGTCTGTCAGGCTTGTTGAAAGCATCTGGCCAGGCGCATTCCGAGTTGACCAAACTGCGGATTAGCAGGTTATCCTCATCTCCAAGCTCTTCATAATACTACACACACTCCCCTCGTCTTAAATAAAAAATCATATCAGTGTGAAAGCAGAGTGAAAAAGGGGATTGAATAGGGGAATCTTGGGTCATCAACCAACCAGCTTCCTTCTAAGCACATTCCTGTTTGTAGGGAGAATGTTTTGAGACTTGAATCTTGATGGTACAGAAATATTCCATAAGGAAGCATAGGCTGTGGAGGTGAGTTTATAACCACTCTTCACTAAATATAAATTCCTTCTATCATATCATATCATACTGTTATAGTTGCTAAAGAACCCCTTCCCACTGGAATATTCAGGATGTGGTTTCTATCTCTTCTTTCCTAAACAAGTCGTCGGTTCCATTCAAACTCATCCAACTCGTGAGAGGATGAGCCTTAAGTCTGAATGTTGTTTCCCTTCGGATCGATTCATGATTATGAATGTCAATCTAGTGGCCATTATCAATCTATTAGATCTTTCCTTAATGTTTTAAAACATGTTTCTTTATATATATATATACAGAGAGAGGGGAAACTCCCTTGAGGTAGGCTGGAAAAAATGCCCTTTAAAACAATTTTCAATCCATTCCCGCCCACCGCTAGCAAATATTGAATACTTTTCAATTATGGAAAATATTTGAAAGGGGGCTTAGTTTAGTTGCTAAGTTTTTGAAGGGGAAGCGTGGATCTTGTTCTCTATTTAAAAATTATTCCCAACATTTATAAAATGTTTCTAAAATTGAACATTTTTAAATAATATTTTATATTAAAAAGAACTCTGTAAGATGTTAACATATATATATATATATATATATATATATATATATATATATATATATATGATCTGTCATCTTATTGTCATAAAAATCAAACTTTAAAGTTAAATTGGAATTGGACAAAGCATAGGGGGTGGAATATAAATATATGAGATTTGATAATATAACAAAATAGAATGAGGAATGTTCCACCAAAAGTGATTAAAAGAAAACAAAAAAAAAAAAATTAGACATTAAAAATAAAGGTACAAAATATCAATCACAAAATCATCAAAAATCGCCGTGTGATATTAAATTAATACAATTAATATAATGTGGTGGTTAATAAATAAAATTAAAAAAAGAAAAAGAAAATATTAAACCAAAGTAATCAATTATTAATCATAAATTAATCCAAAAAAAAAAGGCTAAAAACGACATTTCCCCCTCATTAACTTATTTATTAAAAAATATTTTAAAGAGTTGAAATTATAGAGCCCGTGTTACACGGGATTTTGTTGGCTAAGTACCATTGGTTTTTGGGTAATGATGACAATATATTATTTGCAAAAGTATCCATCAAACCCCTCCAAGATCTCCTTATTCTCGTTTTCTCCCCATTTTTTAGGGGTTAATATGCAAATAAAAATTATAAGTTATGGTCGGCAGGCGTCTTAATTGGATTATAAAATCTCATTTATAAATTTTTTGAAAGCTACTTTTACTTGTATATTATTTTATTGCTAGCTATTCTCCATTTTAAATATATCATTTCCTTATAAATATTTATTATATATTGATGTTTATCTCCTTTTATTTATTTATATTTTAGGGCTTACTCGATATTGTTTTGCAAAAATTAAAAAAATAATAATTGAATTAGATGCTCGGTAAATTGATTTTTTTTTTATTATTATTATTTAATCTCTTTAACGTAAAATAAATAATAAATTTCAGTCACTGAGCGCGTGGGGACAAAGCGCAGAAAAAAGAGAGTGGGGTTTTCGTTTTGCAGGAGAGAGAGAGAGAGAGAGTATGAGCTGTGGGGATATAAGGAGTGGACCCCACCACCCATGTGCCCTCCTTCTGTCGCCACCAGCTCGTGCCTCTCTCAATCATTAGCCCTCTTCTCTTCCCGAATTACCCCTTTCATTAACAAAACCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCATCGGCCATGGCAGCCATTGCTACCTCCTTCTAACCCTTCTTCTGTCATTTCCTCTCCTGCTTCAATCTCTGAACAAAGCACTGAAGTCTGCATCTTCTTCTTCATGTCGAATTCCGATTCTGGCAACACCAATGGGGTCTCCAATGGCGCCGCCGTTGATACCCACAAAAACCAGCCTTCTTCAAATGGAGCCCTCGTCGTCAAAAAGCCCCCCTCCAAGGACCGCCACAGCAAGGTCGATGGTCGTGGCCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGTTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCCATTATTGCCGCTACTGGCACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCTACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGTCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTCCGGTCCGATGACGACGGCGGTAAGGACGATGGGGCGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGATTCCAGCAAGACCCGATTATGGGCAGGTGTGGAGTTTTGCCGCCGCGGCTCCCTCGGAAATGGTGGTTCAACCCGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCCCAACCGCAGCAGCCGATTAGAGAAGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCAGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGACGGGAAGATGACCCTCGCTGA

mRNA sequence

ATCGGACTTACAAATGGTTGGTAATTTGATTACACGGCAAAGAAAGAGAGTAGTAACCTTTCTTTCTCGCCATATACGTATATGCTCTGTAGATTCCCAAGGACGGCCCGCTTACCAGAGCGGCGCTGCTCGCTCCCATACATTAAAACACCCACTCCTGCATCTCATCAACATTTCTTTTAGTAGGGATGAGAATTTGGGAGATGCATCAACATGCGAAGCAGGGGGGCCGGATCCACTGCGCAGTCATCCATTGCTACCTCCTTCTAACCCTTCTTCTGTCATTTCCTCTCCTGCTTCAATCTCTGAACAAAGCACTGAAGTCTGCATCTTCTTCTTCATGTCGAATTCCGATTCTGGCAACACCAATGGGGTCTCCAATGGCGCCGCCGTTGATACCCACAAAAACCAGCCTTCTTCAAATGGAGCCCTCGTCGTCAAAAAGCCCCCCTCCAAGGACCGCCACAGCAAGGTCGATGGTCGTGGCCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGTTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCCATTATTGCCGCTACTGGCACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCTACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGTCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTCCGGTCCGATGACGACGGCGGTAAGGACGATGGGGCGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGATTCCAGCAAGACCCGATTATGGGCAGGTGTGGAGTTTTGCCGCCGCGGCTCCCTCGGAAATGGTGGTTCAACCCGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCCCAACCGCAGCAGCCGATTAGAGAAGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCAGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGACGGGAAGATGACCCTCGCTGA

Coding sequence (CDS)

ATGGTTGGTAATTTGATTACACGGCAAAGAAAGAGAGTAGTAACCTTTCTTTCTCGCCATATACGTATATGCTCTGTAGATTCCCAAGGACGGCCCGCTTACCAGAGCGGCGCTGCTCGCTCCCATACATTAAAACACCCACTCCTGCATCTCATCAACATTTCTTTTAGTAGGGATGAGAATTTGGGAGATGCATCAACATGCGAAGCAGGGGGGCCGGATCCACTGCGCAGTCATCCATTGCTACCTCCTTCTAACCCTTCTTCTGTCATTTCCTCTCCTGCTTCAATCTCTGAACAAAGCACTGAAGTCTGCATCTTCTTCTTCATGTCGAATTCCGATTCTGGCAACACCAATGGGGTCTCCAATGGCGCCGCCGTTGATACCCACAAAAACCAGCCTTCTTCAAATGGAGCCCTCGTCGTCAAAAAGCCCCCCTCCAAGGACCGCCACAGCAAGGTCGATGGTCGTGGCCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGTTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCCATTATTGCCGCTACTGGCACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCTACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGTCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTCCGGTCCGATGACGACGGCGGTAAGGACGATGGGGCGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGATTCCAGCAAGACCCGATTATGGGCAGGTGTGGAGTTTTGCCGCCGCGGCTCCCTCGGAAATGGTGGTTCAACCCGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCCCAACCGCAGCAGCCGATTAGAGAAGCGTCGGCGGCGAGAGTGGGGAATTACCTTCCCAGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGACGGGAAGATGACCCTCGCTGA

Homology

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BLAST of CmoCh04G013310 vs. Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.7e-69
Identity = 162/265 (61.13%), Postives = 188/265 (70.94%), Query Frame = 1


Query: 111 SNSDSGNTNGV---SNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIIC 170
           +N+++ N +G+   SNGA ++    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPIIC
Sbjct: 7   NNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIIC 66

Query: 171 AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSL 230
           AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   STSL
Sbjct: 67  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSL 126

Query: 231 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG---------GKDDGAGVGPTGPGG 290
               ++           L G +PFILGKRVR+D+D          GKD+      T P G
Sbjct: 127 DHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGKDE---TFTTTPAG 186

Query: 291 YWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQ---PIREASAARVGNYL 350
           +WA+PARPD+GQVWSF A AP EM +Q     QQ     Q QQ    + EASAARVGNYL
Sbjct: 187 FWAVPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYL 246

Query: 351 PSHLNLLASLSGGG-GSGRREDDPR 360
           P HLNLLASLSGG  GS RRE+DPR
Sbjct: 247 PGHLNLLASLSGGSPGSDRREEDPR 250

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BLAST of CmoCh04G013310 vs. Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 9.1e-62
Identity = 152/266 (57.14%), Postives = 165/266 (62.03%), Query Frame = 1


Query: 117 NTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 176
           N   VSNG  V+   N+   N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR
Sbjct: 4   NDGAVSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 63

Query: 177 ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTST 236
           ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                   
Sbjct: 64  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS----------------- 123

Query: 237 LSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAGVGPT-------------GPGGYWAIP 296
                       +PF LGKRV   ++G    G G G T             G GG+WA+P
Sbjct: 124 ------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 183

Query: 297 ARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQ----------PIREASAARVGN 356
           ARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVGN
Sbjct: 184 ARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVGN 235

Query: 357 YLPS-HLNLLASLSGG-GGSGRREDD 358
           YLP  HLNLLASLSGG  GSGRREDD
Sbjct: 244 YLPGHHLNLLASLSGGANGSGRREDD 235

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BLAST of CmoCh04G013310 vs. Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-31
Identity = 80/132 (60.61%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 109 FMSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKP----PSKDRHSKVDGRGRRIRMP 168
           F+S+   GN   +S  A   T     SS  AL V K     P+KDRH+KVDGRGRRIRMP
Sbjct: 27  FISSGQHGN---ISTSA---TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMP 86

Query: 169 IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGS 228
            +CAARVFQLTRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGS
Sbjct: 87  AMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGS 146

Query: 229 TSLSSPSSTTST 237
           T  S  S ++S+
Sbjct: 147 TLFSQASKSSSS 152

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BLAST of CmoCh04G013310 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-31
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 137 NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 196
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 197 RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGP 249
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

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BLAST of CmoCh04G013310 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.1e-30
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 135 SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 194
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 195 EPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTL 238
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

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BLAST of CmoCh04G013310 vs. TrEMBL
Match: A0A0A0KPX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.1e-117
Identity = 234/259 (90.35%), Postives = 237/259 (91.51%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNSD  +TNGVSNGA +DTHKN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 230 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAG--------VGPTGPGGYW 289
           SPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD  KDD  G        VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 290 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLN 349
           AIPARPDYGQVWSFAAAAPSEMVVQPGGI+QQASLFAQ QQPIREASAARVGNYLP HLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 350 LLASLSGGGGSGRREDDPR 360
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

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BLAST of CmoCh04G013310 vs. TrEMBL
Match: A0A067ENE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.8e-85
Identity = 190/268 (70.90%), Postives = 207/268 (77.24%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNSD G TNGVSNGA +D  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 230 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGAGVGP------TGP----G 289
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  + VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 290 GYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQP-----QQPIREASAARVG 349
           G+WA+PARPD+GQVWSFAAAA  EMVVQ     QQ     QP     QQ + EASAARVG
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQAAS-QQQHHHHQQPHQLFMQQAMGEASAARVG 240

Query: 350 NYLPSHLNLLASLSGG-GGSGRREDDPR 360
           NYLP HLNLLASLSGG G SGRRE+DPR
Sbjct: 241 NYLPGHLNLLASLSGGPGSSGRREEDPR 266

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BLAST of CmoCh04G013310 vs. TrEMBL
Match: V4VEH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.8e-85
Identity = 190/268 (70.90%), Postives = 207/268 (77.24%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNSD G TNGVSNGA +D  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 230 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGAGVGP------TGP----G 289
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  + VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 290 GYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQP-----QQPIREASAARVG 349
           G+WA+PARPD+GQVWSFAAAA  EMVVQ     QQ     QP     QQ + EASAARVG
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQAAS-QQQHHHHQQPHQLFMQQAMGEASAARVG 240

Query: 350 NYLPSHLNLLASLSGG-GGSGRREDDPR 360
           NYLP HLNLLASLSGG G SGRRE+DPR
Sbjct: 241 NYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of CmoCh04G013310 vs. TrEMBL
Match: A0A061E220_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.8e-83
Identity = 187/271 (69.00%), Postives = 206/271 (76.01%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNS+ G TNG    A +D  + Q   NG+LVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSEGGATNG----AIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG   STSL  
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSL-- 120

Query: 230 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDD----------GAGVGPTGPGG 289
            SST S+ SL   + L GPTPFILGKRVR+DDD  GKDD          G+ VGP G GG
Sbjct: 121 -SSTISSSSLDH-KPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGG 180

Query: 290 YWAIPARPDYGQVWSFAAAAPSEMVVQ------PGGISQQ---ASLFAQPQQPIREASAA 349
           +WA+PARPD+GQVWSFA   P EMVVQ          +QQ   A+LF Q QQ + EASAA
Sbjct: 181 FWAVPARPDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAA 240

Query: 350 RVGNYLPSHLNLLASLSGG-GGSGRREDDPR 360
           RVGNYLP HLNLLASLSG  GGSGRR++DPR
Sbjct: 241 RVGNYLPGHLNLLASLSGAPGGSGRRDEDPR 263

[Close]

BLAST of CmoCh04G013310 vs. TrEMBL
Match: I1LF87_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G285900 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 3.6e-81
Identity = 185/261 (70.88%), Postives = 203/261 (77.78%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNSD+  TNGVSNGA +D  + Q     AL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSDA-TTNGVSNGAIIDAQRQQ-----ALAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATG+GTTPA+FSSVSLSVR    + SLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSSVSLSVR--AAANSLSS 120

Query: 230 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAG-----VGPTGPGGYWAIPA 289
           PSST+      +PQ LS PTPFILGKR+R+D+D  KD+        VGP+ P G WA+PA
Sbjct: 121 PSSTSD----HKPQLLS-PTPFILGKRIRTDEDSSKDEAVSVGPSLVGPSTPPGLWALPA 180

Query: 290 RPDYGQVWSFAAAAPSEMVVQPGGISQQASLFA-----QPQQPIREASAARVGNYLPSHL 349
           RPD+GQ+WSFAAAA  EMV       QQASLFA     Q QQ I EASAARVGNYLP HL
Sbjct: 181 RPDFGQIWSFAAAAAPEMV--SVSQQQQASLFAHHHRQQQQQAIGEASAARVGNYLPGHL 240

Query: 350 NLLASLSGG-GGSGRREDDPR 360
           NLLASLSGG G SGRR+D+PR
Sbjct: 241 NLLASLSGGPGNSGRRDDEPR 246

[Close]

BLAST of CmoCh04G013310 vs. TAIR10
Match: AT5G23280.1 (AT5G23280.1 TCP family transcription factor )

HSP 1 Score: 263.8 bits (673), Expect = 1.5e-70
Identity = 162/265 (61.13%), Postives = 188/265 (70.94%), Query Frame = 1


Query: 111 SNSDSGNTNGV---SNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIIC 170
           +N+++ N +G+   SNGA ++    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPIIC
Sbjct: 7   NNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIIC 66

Query: 171 AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSL 230
           AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   STSL
Sbjct: 67  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSL 126

Query: 231 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG---------GKDDGAGVGPTGPGG 290
               ++           L G +PFILGKRVR+D+D          GKD+      T P G
Sbjct: 127 DHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGKDE---TFTTTPAG 186

Query: 291 YWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQ---PIREASAARVGNYL 350
           +WA+PARPD+GQVWSF A AP EM +Q     QQ     Q QQ    + EASAARVGNYL
Sbjct: 187 FWAVPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYL 246

Query: 351 PSHLNLLASLSGGG-GSGRREDDPR 360
           P HLNLLASLSGG  GS RRE+DPR
Sbjct: 247 PGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of CmoCh04G013310 vs. TAIR10
Match: AT5G08330.1 (AT5G08330.1 TCP family transcription factor )

HSP 1 Score: 238.8 bits (608), Expect = 5.2e-63
Identity = 152/266 (57.14%), Postives = 165/266 (62.03%), Query Frame = 1


Query: 117 NTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 176
           N   VSNG  V+   N+   N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR
Sbjct: 4   NDGAVSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 63

Query: 177 ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTST 236
           ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                   
Sbjct: 64  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS----------------- 123

Query: 237 LSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAGVGPT-------------GPGGYWAIP 296
                       +PF LGKRV   ++G    G G G T             G GG+WA+P
Sbjct: 124 ------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 183

Query: 297 ARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQ----------PIREASAARVGN 356
           ARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVGN
Sbjct: 184 ARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVGN 235

Query: 357 YLPS-HLNLLASLSGG-GGSGRREDD 358
           YLP  HLNLLASLSGG  GSGRREDD
Sbjct: 244 YLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of CmoCh04G013310 vs. TAIR10
Match: AT1G72010.1 (AT1G72010.1 TCP family transcription factor )

HSP 1 Score: 138.7 bits (348), Expect = 7.3e-33
Identity = 80/132 (60.61%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 109 FMSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKP----PSKDRHSKVDGRGRRIRMP 168
           F+S+   GN   +S  A   T     SS  AL V K     P+KDRH+KVDGRGRRIRMP
Sbjct: 27  FISSGQHGN---ISTSA---TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMP 86

Query: 169 IICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGS 228
            +CAARVFQLTRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGS
Sbjct: 87  AMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGS 146

Query: 229 TSLSSPSSTTST 237
           T  S  S ++S+
Sbjct: 147 TLFSQASKSSSS 152

[Close]

BLAST of CmoCh04G013310 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 138.7 bits (348), Expect = 7.3e-33
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 137 NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 196
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 197 RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGP 249
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

[Close]

BLAST of CmoCh04G013310 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-31
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 135 SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 194
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 195 EPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTL 238
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

[Close]

BLAST of CmoCh04G013310 vs. NCBI nr
Match: gi|659090197|ref|XP_008445886.1| (PREDICTED: transcription factor TCP7-like [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 1.2e-117
Identity = 235/259 (90.73%), Postives = 238/259 (91.89%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNSD  +TNGVSN AA+D+HKNQ SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 230 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAG--------VGPTGPGGYW 289
           SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD  KDDG G        VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-AKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 290 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLN 349
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQ QQPIREASAARVGNYLP HLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 350 LLASLSGGGGSGRREDDPR 360
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of CmoCh04G013310 vs. NCBI nr
Match: gi|449451743|ref|XP_004143620.1| (PREDICTED: transcription factor TCP7-like [Cucumis sativus])

HSP 1 Score: 431.4 bits (1108), Expect = 1.5e-117
Identity = 234/259 (90.35%), Postives = 237/259 (91.51%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNSD  +TNGVSNGA +DTHKN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 230 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAG--------VGPTGPGGYW 289
           SPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD  KDD  G        VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 290 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLN 349
           AIPARPDYGQVWSFAAAAPSEMVVQPGGI+QQASLFAQ QQPIREASAARVGNYLP HLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 350 LLASLSGGGGSGRREDDPR 360
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of CmoCh04G013310 vs. NCBI nr
Match: gi|567890197|ref|XP_006437619.1| (hypothetical protein CICLE_v10032441mg [Citrus clementina])

HSP 1 Score: 324.3 bits (830), Expect = 2.6e-85
Identity = 190/268 (70.90%), Postives = 207/268 (77.24%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNSD G TNGVSNGA +D  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 230 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGAGVGP------TGP----G 289
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  + VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 290 GYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQP-----QQPIREASAARVG 349
           G+WA+PARPD+GQVWSFAAAA  EMVVQ     QQ     QP     QQ + EASAARVG
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQAAS-QQQHHHHQQPHQLFMQQAMGEASAARVG 240

Query: 350 NYLPSHLNLLASLSGG-GGSGRREDDPR 360
           NYLP HLNLLASLSGG G SGRRE+DPR
Sbjct: 241 NYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of CmoCh04G013310 vs. NCBI nr
Match: gi|590689527|ref|XP_007043253.1| (TCP family transcription factor [Theobroma cacao])

HSP 1 Score: 316.6 bits (810), Expect = 5.5e-83
Identity = 187/271 (69.00%), Postives = 206/271 (76.01%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 169
           MSNS+ G TNG    A +D  + Q   NG+LVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSEGGATNG----AIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 170 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 229
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG   STSL  
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSL-- 120

Query: 230 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDD----------GAGVGPTGPGG 289
            SST S+ SL   + L GPTPFILGKRVR+DDD  GKDD          G+ VGP G GG
Sbjct: 121 -SSTISSSSLDH-KPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGG 180

Query: 290 YWAIPARPDYGQVWSFAAAAPSEMVVQ------PGGISQQ---ASLFAQPQQPIREASAA 349
           +WA+PARPD+GQVWSFA   P EMVVQ          +QQ   A+LF Q QQ + EASAA
Sbjct: 181 FWAVPARPDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAA 240

Query: 350 RVGNYLPSHLNLLASLSGG-GGSGRREDDPR 360
           RVGNYLP HLNLLASLSG  GGSGRR++DPR
Sbjct: 241 RVGNYLPGHLNLLASLSGAPGGSGRRDEDPR 263

[Close]

BLAST of CmoCh04G013310 vs. NCBI nr
Match: gi|1021569620|ref|XP_016176021.1| (PREDICTED: transcription factor TCP7-like [Arachis ipaensis])

HSP 1 Score: 316.2 bits (809), Expect = 7.2e-83
Identity = 191/273 (69.96%), Postives = 213/273 (78.02%), Query Frame = 1


Query: 110 MSNSDSGNTNGVSNGAAVDTHKN---QPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPII 169
           MSN+D G +N V+N   +DTH++   Q  +NGALVVKKPPSKDRHSKVDGRGRRIRMPII
Sbjct: 1   MSNTD-GTSNAVTN---IDTHRHHSQQQPTNGALVVKKPPSKDRHSKVDGRGRRIRMPII 60

Query: 170 CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTS 229
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FSSVS+SVRG  G  S
Sbjct: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAG--S 120

Query: 230 LSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDDGAGVGP-----TGPG--- 289
           LSSPSST++  SL   + L  PTPFILGKR+R+DDD   KDDG  VGP      GPG   
Sbjct: 121 LSSPSSTSAASSLDH-KPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSLVGPGAPA 180

Query: 290 GYWAIPARPDYGQVWSFAAAA-PSEMVVQPGGIS----QQASLFA-----QPQQPIREAS 349
           G WA+PARPD+GQ+WSFA AA P EMVVQ   +S    QQASLF      Q QQ + EAS
Sbjct: 181 GLWALPARPDFGQIWSFATAAPPPEMVVQSAAVSVSQQQQASLFVHHQHQQQQQAMGEAS 240

Query: 350 AARVGNYLPSHLNLLASLSGG-GGSGRREDDPR 360
           AAR+GNYLP HLNLLASLSGG G SGRR+D+PR
Sbjct: 241 AARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR 266

The following BLAST results are available for this feature:

BLAST of CmoCh04G013310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP7_ARATH	2.7e-69	61.13	Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1	[more]
TCP21_ARATH	9.1e-62	57.14	Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1	[more]
TCP22_ARATH	1.3e-31	60.61	Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1	[more]
TCP14_ARATH	1.3e-31	63.25	Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1	[more]
TCP8_ARATH	4.1e-30	66.99	Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1	[more]

BLAST of CmoCh04G013310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX7_CUCSA	1.1e-117	90.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1	[more]
A0A067ENE6_CITSI	1.8e-85	70.90	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1	[more]
V4VEH8_9ROSI	1.8e-85	70.90	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1	[more]
A0A061E220_THECC	3.8e-83	69.00	TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1	[more]
I1LF87_SOYBN	3.6e-81	70.88	Uncharacterized protein OS=Glycine max GN=GLYMA_10G285900 PE=4 SV=1	[more]

BLAST of CmoCh04G013310 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23280.1	1.5e-70	61.13	TCP family transcription factor	[more]
AT5G08330.1	5.2e-63	57.14	TCP family transcription factor	[more]
AT1G72010.1	7.3e-33	60.61	TCP family transcription factor	[more]
AT3G47620.1	7.3e-33	63.25	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G58100.1	2.3e-31	66.99	TCP family transcription factor	[more]

BLAST of CmoCh04G013310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090197\|ref\|XP_008445886.1\|	1.2e-117	90.73	PREDICTED: transcription factor TCP7-like [Cucumis melo]	[more]
gi\|449451743\|ref\|XP_004143620.1\|	1.5e-117	90.35	PREDICTED: transcription factor TCP7-like [Cucumis sativus]	[more]
gi\|567890197\|ref\|XP_006437619.1\|	2.6e-85	70.90	hypothetical protein CICLE_v10032441mg [Citrus clementina]	[more]
gi\|590689527\|ref\|XP_007043253.1\|	5.5e-83	69.00	TCP family transcription factor [Theobroma cacao]	[more]
gi\|1021569620\|ref\|XP_016176021.1\|	7.2e-83	69.96	PREDICTED: transcription factor TCP7-like [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G013310.1	CmoCh04G013310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 147..233 score: 7.7
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 147..201 score: 28
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 52..274 score: 1.5
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 52..274 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G013310	Cucsa.166230	Cucumber (Gy14) v1	cgycmoB0475
CmoCh04G013310	CmaCh18G008100	Cucurbita maxima (Rimu)	cmacmoB420
CmoCh04G013310	CmaCh04G012590	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G013310	CmaCh04G022460	Cucurbita maxima (Rimu)	cmacmoB744
CmoCh04G013310	Cla020050	Watermelon (97103) v1	cmowmB719
CmoCh04G013310	Csa5G175170	Cucumber (Chinese Long) v2	cmocuB736
CmoCh04G013310	MELO3C025049	Melon (DHL92) v3.5.1	cmomeB623
CmoCh04G013310	MELO3C011754	Melon (DHL92) v3.5.1	cmomeB644
CmoCh04G013310	ClCG02G014110	Watermelon (Charleston Gray)	cmowcgB643
CmoCh04G013310	CSPI05G08570	Wild cucumber (PI 183967)	cmocpiB746
CmoCh04G013310	Lsi04G007920	Bottle gourd (USVL1VR-Ls)	cmolsiB669
CmoCh04G013310	Cp4.1LG09g04990	Cucurbita pepo (Zucchini)	cmocpeB651
CmoCh04G013310	Cp4.1LG01g10190	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G013310	MELO3C025049.2	Melon (DHL92) v3.6.1	cmomedB711
CmoCh04G013310	MELO3C011754.2	Melon (DHL92) v3.6.1	cmomedB734
CmoCh04G013310	CsaV3_5G006010	Cucumber (Chinese Long) v3	cmocucB0872
CmoCh04G013310	Cla97C02G039860	Watermelon (97103) v2	cmowmbB713
CmoCh04G013310	Bhi07G000917	Wax gourd	cmowgoB0905
CmoCh04G013310	CsGy5G005950	Cucumber (Gy14) v2	cgybcmoB651
CmoCh04G013310	Carg02051	Silver-seed gourd	carcmoB1138
CmoCh04G013310	Carg14457	Silver-seed gourd	carcmoB0987

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G013310	CmoCh18G008120	Cucurbita moschata (Rifu)	cmocmoB336
CmoCh04G013310	CmoCh04G023470	Cucurbita moschata (Rifu)	cmocmoB470

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G013310	Wax gourd	cmowgoB0891