Cucsa.166230 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCATTCTTCTTCATCTTCTTCTTCCTTCTCTCTCTCTCCTCTCACCTTCAACAATGGCACCCATTACTACCTCCTCCTTCTAACCCAACCCTTCTTTAATCTCACTCCCAATTACTCAACTTCCCCCATCTTCTTCTTCTTCATGTCTAATTCTGATCATACTAATGGCGTCTCCAATGGCGCTACCATCGACACTCACAAGAATCACTCCTCTTCCAATGGAGCTCTCGTTGTTAAAAAGCCTCCTTCTAAGGATCGTCATAGTAAGGTTGATGGTCGTGGCCGTCGTATCCGTATGCCTATCATCTGTGCCGCTCGAGTTTTCCAGCTCACTCGTGAACTTGGTCATAAGTCCGACGGTCAAACCATCGAGTGGCTTCTTCGTCAAGCTGAGCCTTCTATTATTGCTGCTACTGGTACTGGTACTACTCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACTACTTCTACTCTTTCCCTCTCACGTCCTCAACCTCTTTCCGGTCCCACGCCGTTTATTCTCGGCAAGCGTGTTAGGTCCGACGATGATGCTAAAGACGATGCCTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACGGGGCCTGGTGGGTATTGGGCGATTCCGGCTAGACCCGATTATGgCCAGGTTTGGAGTTTTGCTGCCGCGGCTCCGTCGGAGATGGTGGTTCAACCAGGGGGGATTGCTCAACAAGCTTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCCAGAGTGGGGAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGAGGTGGTTCTGGACGGCGGGAAGATGACCCTCGTTAATTGTTGTAATGGGTTGGGGATATTCTTCTTCTTCTTCTTCTTCGTCGTCGTCGTATTTTGTACAAATTATGTGTGTCAATTGCTTTCCTGTGTGCAGCTAAGAAAAaGGGTTAATTCTAGTGGGAATGTAGGATTCTAGGGTTTCAGTTTGCTTGGAAATCAGAATTCGTAGATCGACTTTCGATTTTCCATGGATGAGTTCGTTCAGATTAGAACTTTAGGGTTTGAAATTGCTAGAAACAAAAaTTAGGGTtTTATTTTTCTTCTTCCATCTTATGAGAGTGAGAAGAAGATTCAAGATTCATCGCTGCTGCGAATTGACGATTGATGAACTCGAACAGGGGAAGCAGATTTGTTGAACATTGAATCGGAGCTTCAGTTTTTGGCCGGAATCGGCTTACTTATTGCAGTTGCGACGACACCATTGAAGACCATTCTGAAGCTATCTTCTTCAATGGTCACTACCATTTGAATTTGAAAAGATGAAGCTCCAATCTCTCACTCTGTAAGACCTCTGTTTTTtCTTCTAAAGAATTCCATTTGTATTCTTAGAATTTGTTGGCTTGACAATAATGGGTGTTTATTATTATTTTCATTATTTTTTTTtCTTGTTCTTGTTTATGTCAGTGGATTGTTTCTGGGATTTCTCTGATGTGAATAAAAATCCCATTGGTTTTTtCTACCATTTTTGCAAGTAAACAACATTGTTACATTACATCATCAC TTCCAttcttcttcatcttcttcttccttctctctctctcctCTCACCTTCAACAATGGCACCCATTACTACCTCCTCCTTCTAACCCAACCCTTCTTTAATCTCACTCCCAATTACTCAACTTCCCCCATCTTCTTCTTCTTCATGTCTAATTCTGATCATACTAATGGCGTCTCCAATGGCGCTACCATCGACACTCACAAGAATCACTCCTCTTCCAATGGAGCTCTCGTTGTTAAAAAGCCTCCTTCTAAGGATCGTCATAGTAAGGTTGATGGTCGTGGCCGTCGTATCCGTATGCCTATCATCTGTGCCGCTCGAGTTTTCCAGCTCACTCGTGAACTTGGTCATAAGTCCGACGGTCAAACCATCGAGTGGCTTCTTCGTCAAGCTGAGCCTTCTATTATTGCTGCTACTGGTACTGGTACTACTCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACTACTTCTACTCTTTCCCTCTCACGTCCTCAACCTCTTTCCGGTCCCACGCCGTTTATTCTCGGCAAGCGTGTTAGGTCCGACGATGATGCTAAAGACGATGCCTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACGGGGCCTGGTGGGTATTGGGCGATTCCGGCTAGACCCGATTATGGCCAGGTTTGGAGTTTTGCTGCCGCGGCTCCGTCGGAGATGGTGGTTCAACCAGGGGGGATTGCTCAACAAGCTTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCCAGAGTGGGGAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGAGGTGGTTCTGGACGGCGGGAAGATGACCCTCGTTAATTGTTGTAATGGGTTGGGGATAttcttcttcttcttcttcttcGTCGTCGTCGTATTTTGTACAAATTATGTGTGTCAATTGCTTTCCTGTGTGCAGCTAAGAAAAAGGGTTAATTCTAGTGGGAATGTAGGATTCTAGGGTTTCAGTTTGCTTGGAAATCAGAATTCGTAGATCGACTTTCGATTTTCCATGGATGAGTTCGTTCAGATTAGAACTTTAGGGTTTGAAATTGCTAGAAACAAAAATTAGGGTTTTATTTTTCTTCTTCCATCTTATGAGAGTGAGAAGAAGATTCAAGATTCATCGCTGCTGCGAATTGACGATTGATGAACTCGAACAGGGGAAGCAGATTTGTTGAACATTGAATCGGAGCTTCAGTTTTTGGCCGGAATCGGCTTACTTATTGCAGTTGCGACGACACCATTGAAGACCATTCTGAAGCTATCTTCTTCAATGGTCACTACCATTTGAATTTGAAAAGATGAAGCTCCAATCTCTCACTCTGTAAGACCTCTGTTTTTTCTTCTAAAGAATTCCATTTGTATTCTTAGAATTTGTTGGCTTGACAATAATGGGTGtttattattattttcattatttttttttCTTGTTCTTGTTTATGTCAGTGGATTGTTTCTGGGATTTCTCTGATGTGAATAAAAATCCCATTGGTTTTTTCTACCATTTTTGCAAGTAAACAACATTGTTACATTACATCATCAC ATGTCTAATTCTGATCATACTAATGGCGTCTCCAATGGCGCTACCATCGACACTCACAAGAATCACTCCTCTTCCAATGGAGCTCTCGTTGTTAAAAAGCCTCCTTCTAAGGATCGTCATAGTAAGGTTGATGGTCGTGGCCGTCGTATCCGTATGCCTATCATCTGTGCCGCTCGAGTTTTCCAGCTCACTCGTGAACTTGGTCATAAGTCCGACGGTCAAACCATCGAGTGGCTTCTTCGTCAAGCTGAGCCTTCTATTATTGCTGCTACTGGTACTGGTACTACTCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACTACTTCTACTCTTTCCCTCTCACGTCCTCAACCTCTTTCCGGTCCCACGCCGTTTATTCTCGGCAAGCGTGTTAGGTCCGACGATGATGCTAAAGACGATGCCTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACGGGGCCTGGTGGGTATTGGGCGATTCCGGCTAGACCCGATTATGgCCAGGTTTGGAGTTTTGCTGCCGCGGCTCCGTCGGAGATGGTGGTTCAACCAGGGGGGATTGCTCAACAAGCTTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAGGCGTCGGCGGCCAGAGTGGGGAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGAGGTGGTTCTGGACGGCGGGAAGATGACCCTCGTTAA MSNSDHTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDDAKDDALGVGQAVGSIVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGSGRREDDPR*
BLAST of Cucsa.166230 vs. Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 3.7e-73 Identity = 155/261 (59.39%), Postives = 186/261 (71.26%), Query Frame = 1
BLAST of Cucsa.166230 vs. Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.0e-67 Identity = 154/269 (57.25%), Postives = 172/269 (63.94%), Query Frame = 1
BLAST of Cucsa.166230 vs. Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34 Identity = 79/131 (60.31%), Postives = 99/131 (75.57%), Query Frame = 1
BLAST of Cucsa.166230 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.7e-33 Identity = 73/118 (61.86%), Postives = 90/118 (76.27%), Query Frame = 1
BLAST of Cucsa.166230 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.2e-32 Identity = 69/105 (65.71%), Postives = 86/105 (81.90%), Query Frame = 1
BLAST of Cucsa.166230 vs. TrEMBL
Match: A0A0A0KPX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 2.0e-142 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Cucsa.166230 vs. TrEMBL
Match: A0A061E220_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.5e-92 Identity = 192/270 (71.11%), Postives = 214/270 (79.26%), Query Frame = 1
BLAST of Cucsa.166230 vs. TrEMBL
Match: V4VEH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 8.0e-91 Identity = 193/269 (71.75%), Postives = 209/269 (77.70%), Query Frame = 1
BLAST of Cucsa.166230 vs. TrEMBL
Match: A0A067ENE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 8.0e-91 Identity = 193/269 (71.75%), Postives = 209/269 (77.70%), Query Frame = 1
BLAST of Cucsa.166230 vs. TrEMBL
Match: A0A0D2VBM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G068600 PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 6.8e-90 Identity = 188/266 (70.68%), Postives = 210/266 (78.95%), Query Frame = 1
BLAST of Cucsa.166230 vs. TAIR10
Match: AT5G23280.1 (AT5G23280.1 TCP family transcription factor ) HSP 1 Score: 276.2 bits (705), Expect = 2.1e-74 Identity = 155/261 (59.39%), Postives = 186/261 (71.26%), Query Frame = 1
BLAST of Cucsa.166230 vs. TAIR10
Match: AT5G08330.1 (AT5G08330.1 TCP family transcription factor ) HSP 1 Score: 256.5 bits (654), Expect = 1.7e-68 Identity = 154/269 (57.25%), Postives = 172/269 (63.94%), Query Frame = 1
BLAST of Cucsa.166230 vs. TAIR10
Match: AT1G72010.1 (AT1G72010.1 TCP family transcription factor ) HSP 1 Score: 148.3 bits (373), Expect = 6.6e-36 Identity = 79/131 (60.31%), Postives = 99/131 (75.57%), Query Frame = 1
BLAST of Cucsa.166230 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14) HSP 1 Score: 144.4 bits (363), Expect = 9.5e-35 Identity = 73/118 (61.86%), Postives = 90/118 (76.27%), Query Frame = 1
BLAST of Cucsa.166230 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor ) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-33 Identity = 69/105 (65.71%), Postives = 86/105 (81.90%), Query Frame = 1
BLAST of Cucsa.166230 vs. NCBI nr
Match: gi|449451743|ref|XP_004143620.1| (PREDICTED: transcription factor TCP7-like [Cucumis sativus]) HSP 1 Score: 513.1 bits (1320), Expect = 2.9e-142 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Cucsa.166230 vs. NCBI nr
Match: gi|659090197|ref|XP_008445886.1| (PREDICTED: transcription factor TCP7-like [Cucumis melo]) HSP 1 Score: 493.8 bits (1270), Expect = 1.8e-136 Identity = 247/256 (96.48%), Postives = 249/256 (97.27%), Query Frame = 1
BLAST of Cucsa.166230 vs. NCBI nr
Match: gi|1021569620|ref|XP_016176021.1| (PREDICTED: transcription factor TCP7-like [Arachis ipaensis]) HSP 1 Score: 359.8 bits (922), Expect = 4.1e-96 Identity = 199/273 (72.89%), Postives = 222/273 (81.32%), Query Frame = 1
BLAST of Cucsa.166230 vs. NCBI nr
Match: gi|590689527|ref|XP_007043253.1| (TCP family transcription factor [Theobroma cacao]) HSP 1 Score: 346.7 bits (888), Expect = 3.6e-92 Identity = 192/270 (71.11%), Postives = 214/270 (79.26%), Query Frame = 1
BLAST of Cucsa.166230 vs. NCBI nr
Match: gi|567890197|ref|XP_006437619.1| (hypothetical protein CICLE_v10032441mg [Citrus clementina]) HSP 1 Score: 341.7 bits (875), Expect = 1.1e-90 Identity = 193/269 (71.75%), Postives = 209/269 (77.70%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |