CmaCh04G012590 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G012590
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	TCP family transcription factor
Location	Cma_Chr04 : 6439273 .. 6440025 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATTCCGATTCTGGCAACACCAATGGGGTCTCCAATGGCGCCGCCATTGATACCCACAAAAACCAGCCCTCTTCAAATGGAGCCCTCGTCGTCAAAAAGCCCCCCTCCAAGGACCGCCACAGCAAGGTTGATGGTCGTGGCCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGCTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCTATTATTGCCGCCACTGGCACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCCACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGCCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTCCGGTCCGATGACGACGGCGGTAAGGACGATGGGACGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGATTCCAGCGAGACCCGATTATGGACAGGTGTGGAGTTTTGCCGCGGCGGCTCCCTCGGAAATGGTGGTTCAACCTGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAAGCATCAGCGGCGAGAGTGGGGAATTACCTTCCCGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGGCGGGAAGATGACCCTCGCTGA

mRNA sequence

ATGTCAAATTCCGATTCTGGCAACACCAATGGGGTCTCCAATGGCGCCGCCATTGATACCCACAAAAACCAGCCCTCTTCAAATGGAGCCCTCGTCGTCAAAAAGCCCCCCTCCAAGGACCGCCACAGCAAGGTTGATGGTCGTGGCCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGCTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCTATTATTGCCGCCACTGGCACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCCACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGCCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTCCGGTCCGATGACGACGGCGGTAAGGACGATGGGACGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGATTCCAGCGAGACCCGATTATGGACAGGTGTGGAGTTTTGCCGCGGCGGCTCCCTCGGAAATGGTGGTTCAACCTGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAAGCATCAGCGGCGAGAGTGGGGAATTACCTTCCCGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGGCGGGAAGATGACCCTCGCTGA

Coding sequence (CDS)

ATGTCAAATTCCGATTCTGGCAACACCAATGGGGTCTCCAATGGCGCCGCCATTGATACCCACAAAAACCAGCCCTCTTCAAATGGAGCCCTCGTCGTCAAAAAGCCCCCCTCCAAGGACCGCCACAGCAAGGTTGATGGTCGTGGCCGCCGCATCCGTATGCCCATCATATGCGCCGCTCGAGTATTCCAGCTGACTCGAGAGCTTGGTCATAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCCTCTATTATTGCCGCCACTGGCACCGGCACTACCCCGGCTAATTTCTCCTCCGTCTCTCTTTCCGTCAGAGGAAATGGCGGCTCCACTTCTCTCTCTTCCCCTTCTTCCACCACTTCAACTCTCTCCCTCTCTCGCCCCCAGGCTCTCTCGGGCCCCACGCCGTTTATTCTCGGCAAGCGCGTCCGGTCCGATGACGACGGCGGTAAGGACGATGGGACGGGAGTGGGTCCGACTGGGCCAGGTGGGTACTGGGCGATTCCAGCGAGACCCGATTATGGACAGGTGTGGAGTTTTGCCGCGGCGGCTCCCTCGGAAATGGTGGTTCAACCTGGGGGGATTTCTCAACAAGCGTCGTTGTTTGCTCAACAGCAGCAGCCGATTAGAGAAGCATCAGCGGCGAGAGTGGGGAATTACCTTCCCGGTCATCTGAATTTACTGGCGTCTTTGTCCGGTGGCGGTGGTTCTGGCCGGCGGGAAGATGACCCTCGCTGA

Protein sequence

MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTGVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGSGRREDDPR

Homology

[Close]

BLAST of CmaCh04G012590 vs. Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.9e-70
Identity = 165/265 (62.26%), Postives = 190/265 (71.70%), Query Frame = 1


Query: 2   SNSDSGNTNGV---SNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIIC 61
           +N+++ N +G+   SNGA I+    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPIIC
Sbjct: 7   NNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIIC 66

Query: 62  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSL 121
           AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   STSL
Sbjct: 67  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSL 126

Query: 122 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG---------GKDDGTGVGPTGPGG 181
               ++           L G +PFILGKRVR+D+D          GKD+      T P G
Sbjct: 127 DHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGKDE---TFTTTPAG 186

Query: 182 YWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQ---PIREASAARVGNYL 241
           +WA+PARPD+GQVWSF A AP EM +Q     QQ     QQQQ    + EASAARVGNYL
Sbjct: 187 FWAVPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYL 246

Query: 242 PGHLNLLASLSGGG-GSGRREDDPR 251
           PGHLNLLASLSGG  GS RRE+DPR
Sbjct: 247 PGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of CmaCh04G012590 vs. Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.7e-62
Identity = 152/266 (57.14%), Postives = 166/266 (62.41%), Query Frame = 1


Query: 8   NTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 67
           N   VSNG  ++   N+   N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR
Sbjct: 4   NDGAVSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 63

Query: 68  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTST 127
           ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                   
Sbjct: 64  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS----------------- 123

Query: 128 LSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTGVGPT-------------GPGGYWAIP 187
                       +PF LGKRV   ++G    G G G T             G GG+WA+P
Sbjct: 124 ------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 183

Query: 188 ARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQ----------PIREASAARVGN 247
           ARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVGN
Sbjct: 184 ARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVGN 235

Query: 248 YLPG-HLNLLASLSGG-GGSGRREDD 249
           YLPG HLNLLASLSGG  GSGRREDD
Sbjct: 244 YLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of CmaCh04G012590 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.0e-32
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 28  NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 87
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 88  RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGP 140
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

[Close]

BLAST of CmaCh04G012590 vs. Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-31
Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 1


Query: 6   SGNTNGVSNGAAIDTHKNQPSSNGALVVKKP----PSKDRHSKVDGRGRRIRMPIICAAR 65
           SG    +S  A   T     SS  AL V K     P+KDRH+KVDGRGRRIRMP +CAAR
Sbjct: 30  SGQHGNISTSA---TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAAR 89

Query: 66  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSP 125
           VFQLTRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGST  S  
Sbjct: 90  VFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQA 149

Query: 126 SSTTST 128
           S ++S+
Sbjct: 150 SKSSSS 152

[Close]

BLAST of CmaCh04G012590 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-30
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 26  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 85
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 86  EPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTL 129
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

[Close]

BLAST of CmaCh04G012590 vs. TrEMBL
Match: A0A0A0KPX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 8.8e-119
Identity = 237/259 (91.51%), Postives = 239/259 (92.28%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD  +TNGVSNGA IDTHKN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTG--------VGPTGPGGYW 180
           SPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD  KDD  G        VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQPGGI+QQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 251
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of CmaCh04G012590 vs. TrEMBL
Match: V4VEH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.4e-86
Identity = 193/269 (71.75%), Postives = 209/269 (77.70%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD G TNGVSNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGTGVGP------TGP----G 180
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  + VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 181 GYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQ------QQPIREASAARV 240
           G+WA+PARPD+GQVWSFAAAA  EMVVQ    SQQ     QQ      QQ + EASAARV
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQ--AASQQQHHHHQQPHQLFMQQAMGEASAARV 240

Query: 241 GNYLPGHLNLLASLSGG-GGSGRREDDPR 251
           GNYLPGHLNLLASLSGG G SGRRE+DPR
Sbjct: 241 GNYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of CmaCh04G012590 vs. TrEMBL
Match: A0A067ENE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.4e-86
Identity = 193/269 (71.75%), Postives = 209/269 (77.70%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD G TNGVSNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGTGVGP------TGP----G 180
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  + VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 181 GYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQ------QQPIREASAARV 240
           G+WA+PARPD+GQVWSFAAAA  EMVVQ    SQQ     QQ      QQ + EASAARV
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQ--AASQQQHHHHQQPHQLFMQQAMGEASAARV 240

Query: 241 GNYLPGHLNLLASLSGG-GGSGRREDDPR 251
           GNYLPGHLNLLASLSGG G SGRRE+DPR
Sbjct: 241 GNYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of CmaCh04G012590 vs. TrEMBL
Match: A0A061E220_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.2e-84
Identity = 189/271 (69.74%), Postives = 208/271 (76.75%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNS+ G TNG    A +D  + Q   NG+LVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSEGGATNG----AIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG   STSL  
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSL-- 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDD----------GTGVGPTGPGG 180
            SST S+ SL   + L GPTPFILGKRVR+DDD  GKDD          G+ VGP G GG
Sbjct: 121 -SSTISSSSLDH-KPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAPSEMVVQ------PGGISQQ---ASLFAQQQQPIREASAA 240
           +WA+PARPD+GQVWSFA   P EMVVQ          +QQ   A+LF QQQQ + EASAA
Sbjct: 181 FWAVPARPDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAA 240

Query: 241 RVGNYLPGHLNLLASLSGG-GGSGRREDDPR 251
           RVGNYLPGHLNLLASLSG  GGSGRR++DPR
Sbjct: 241 RVGNYLPGHLNLLASLSGAPGGSGRRDEDPR 263

[Close]

BLAST of CmaCh04G012590 vs. TrEMBL
Match: I1LF87_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G285900 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.3e-82
Identity = 188/261 (72.03%), Postives = 205/261 (78.54%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD+  TNGVSNGA ID  + Q     AL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSDA-TTNGVSNGAIIDAQRQQ-----ALAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATG+GTTPA+FSSVSLSVR    + SLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSSVSLSVR--AAANSLSS 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTG-----VGPTGPGGYWAIPA 180
           PSST+      +PQ LS PTPFILGKR+R+D+D  KD+        VGP+ P G WA+PA
Sbjct: 121 PSSTSD----HKPQLLS-PTPFILGKRIRTDEDSSKDEAVSVGPSLVGPSTPPGLWALPA 180

Query: 181 RPDYGQVWSFAAAAPSEMVVQPGGISQQASLFA-----QQQQPIREASAARVGNYLPGHL 240
           RPD+GQ+WSFAAAA  EMV       QQASLFA     QQQQ I EASAARVGNYLPGHL
Sbjct: 181 RPDFGQIWSFAAAAAPEMV--SVSQQQQASLFAHHHRQQQQQAIGEASAARVGNYLPGHL 240

Query: 241 NLLASLSGG-GGSGRREDDPR 251
           NLLASLSGG G SGRR+D+PR
Sbjct: 241 NLLASLSGGPGNSGRRDDEPR 246

[Close]

BLAST of CmaCh04G012590 vs. TAIR10
Match: AT5G23280.1 (AT5G23280.1 TCP family transcription factor )

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-71
Identity = 165/265 (62.26%), Postives = 190/265 (71.70%), Query Frame = 1


Query: 2   SNSDSGNTNGV---SNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIIC 61
           +N+++ N +G+   SNGA I+    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPIIC
Sbjct: 7   NNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIIC 66

Query: 62  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSL 121
           AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   STSL
Sbjct: 67  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSL 126

Query: 122 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG---------GKDDGTGVGPTGPGG 181
               ++           L G +PFILGKRVR+D+D          GKD+      T P G
Sbjct: 127 DHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGKDE---TFTTTPAG 186

Query: 182 YWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQ---PIREASAARVGNYL 241
           +WA+PARPD+GQVWSF A AP EM +Q     QQ     QQQQ    + EASAARVGNYL
Sbjct: 187 FWAVPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYL 246

Query: 242 PGHLNLLASLSGGG-GSGRREDDPR 251
           PGHLNLLASLSGG  GS RRE+DPR
Sbjct: 247 PGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of CmaCh04G012590 vs. TAIR10
Match: AT5G08330.1 (AT5G08330.1 TCP family transcription factor )

HSP 1 Score: 239.6 bits (610), Expect = 2.1e-63
Identity = 152/266 (57.14%), Postives = 166/266 (62.41%), Query Frame = 1


Query: 8   NTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 67
           N   VSNG  ++   N+   N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR
Sbjct: 4   NDGAVSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTR 63

Query: 68  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTST 127
           ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                   
Sbjct: 64  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLSTS----------------- 123

Query: 128 LSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTGVGPT-------------GPGGYWAIP 187
                       +PF LGKRV   ++G    G G G T             G GG+WA+P
Sbjct: 124 ------------SPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVP 183

Query: 188 ARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQ----------PIREASAARVGN 247
           ARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVGN
Sbjct: 184 ARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVGN 235

Query: 248 YLPG-HLNLLASLSGG-GGSGRREDD 249
           YLPG HLNLLASLSGG  GSGRREDD
Sbjct: 244 YLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of CmaCh04G012590 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 138.7 bits (348), Expect = 5.1e-33
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 28  NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 87
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 88  RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTLSLSRPQALSGP 140
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

[Close]

BLAST of CmaCh04G012590 vs. TAIR10
Match: AT1G72010.1 (AT1G72010.1 TCP family transcription factor )

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-32
Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 1


Query: 6   SGNTNGVSNGAAIDTHKNQPSSNGALVVKKP----PSKDRHSKVDGRGRRIRMPIICAAR 65
           SG    +S  A   T     SS  AL V K     P+KDRH+KVDGRGRRIRMP +CAAR
Sbjct: 30  SGQHGNISTSA---TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAAR 89

Query: 66  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSP 125
           VFQLTRELGHKSDG+TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGST  S  
Sbjct: 90  VFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQA 149

Query: 126 SSTTST 128
           S ++S+
Sbjct: 150 SKSSSS 152

[Close]

BLAST of CmaCh04G012590 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 26  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 85
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 86  EPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSSPSSTTSTL 129
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

[Close]

BLAST of CmaCh04G012590 vs. NCBI nr
Match: gi|659090197|ref|XP_008445886.1| (PREDICTED: transcription factor TCP7-like [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 9.7e-119
Identity = 238/259 (91.89%), Postives = 240/259 (92.66%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD  +TNGVSN AAID+HKNQ SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTG--------VGPTGPGGYW 180
           SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD  KDDG G        VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-AKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 251
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of CmaCh04G012590 vs. NCBI nr
Match: gi|449451743|ref|XP_004143620.1| (PREDICTED: transcription factor TCP7-like [Cucumis sativus])

HSP 1 Score: 434.5 bits (1116), Expect = 1.3e-118
Identity = 237/259 (91.51%), Postives = 239/259 (92.28%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD  +TNGVSNGA IDTHKN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD--HTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSTSLS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGS SLS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTG--------VGPTGPGGYW 180
           SPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD  KDD  G        VGPTGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQPGGI+QQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 251
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of CmaCh04G012590 vs. NCBI nr
Match: gi|567890197|ref|XP_006437619.1| (hypothetical protein CICLE_v10032441mg [Citrus clementina])

HSP 1 Score: 325.9 bits (834), Expect = 6.3e-86
Identity = 193/269 (71.75%), Postives = 209/269 (77.70%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNSD G TNGVSNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSD-GATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG G STSLSS
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSS 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDG--GKDDGTGVGP------TGP----G 180
             S+++  +    +   GP PFILGKRVRSDDDG  G+D  + VGP       GP    G
Sbjct: 121 TVSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGG 180

Query: 181 GYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQ------QQPIREASAARV 240
           G+WA+PARPD+GQVWSFAAAA  EMVVQ    SQQ     QQ      QQ + EASAARV
Sbjct: 181 GFWALPARPDFGQVWSFAAAAAPEMVVQ--AASQQQHHHHQQPHQLFMQQAMGEASAARV 240

Query: 241 GNYLPGHLNLLASLSGG-GGSGRREDDPR 251
           GNYLPGHLNLLASLSGG G SGRRE+DPR
Sbjct: 241 GNYLPGHLNLLASLSGGPGSSGRREEDPR 266

[Close]

BLAST of CmaCh04G012590 vs. NCBI nr
Match: gi|1021569620|ref|XP_016176021.1| (PREDICTED: transcription factor TCP7-like [Arachis ipaensis])

HSP 1 Score: 319.7 bits (818), Expect = 4.5e-84
Identity = 194/273 (71.06%), Postives = 215/273 (78.75%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKN---QPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPII 60
           MSN+D G +N V+N   IDTH++   Q  +NGALVVKKPPSKDRHSKVDGRGRRIRMPII
Sbjct: 1   MSNTD-GTSNAVTN---IDTHRHHSQQQPTNGALVVKKPPSKDRHSKVDGRGRRIRMPII 60

Query: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTS 120
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FSSVS+SVRG  G  S
Sbjct: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAG--S 120

Query: 121 LSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDDGTGVGP-----TGPG--- 180
           LSSPSST++  SL   + L  PTPFILGKR+R+DDD   KDDG  VGP      GPG   
Sbjct: 121 LSSPSSTSAASSLDH-KPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSLVGPGAPA 180

Query: 181 GYWAIPARPDYGQVWSFAAAA-PSEMVVQPGGIS----QQASLFA-----QQQQPIREAS 240
           G WA+PARPD+GQ+WSFA AA P EMVVQ   +S    QQASLF      QQQQ + EAS
Sbjct: 181 GLWALPARPDFGQIWSFATAAPPPEMVVQSAAVSVSQQQQASLFVHHQHQQQQQAMGEAS 240

Query: 241 AARVGNYLPGHLNLLASLSGG-GGSGRREDDPR 251
           AAR+GNYLPGHLNLLASLSGG G SGRR+D+PR
Sbjct: 241 AARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR 266

[Close]

BLAST of CmaCh04G012590 vs. NCBI nr
Match: gi|590689527|ref|XP_007043253.1| (TCP family transcription factor [Theobroma cacao])

HSP 1 Score: 319.7 bits (818), Expect = 4.5e-84
Identity = 189/271 (69.74%), Postives = 208/271 (76.75%), Query Frame = 1


Query: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNS+ G TNG    A +D  + Q   NG+LVVKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSEGGATNG----AIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+VS+SVRG   STSL  
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSL-- 120

Query: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GGKDD----------GTGVGPTGPGG 180
            SST S+ SL   + L GPTPFILGKRVR+DDD  GKDD          G+ VGP G GG
Sbjct: 121 -SSTISSSSLDH-KPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAPSEMVVQ------PGGISQQ---ASLFAQQQQPIREASAA 240
           +WA+PARPD+GQVWSFA   P EMVVQ          +QQ   A+LF QQQQ + EASAA
Sbjct: 181 FWAVPARPDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAA 240

Query: 241 RVGNYLPGHLNLLASLSGG-GGSGRREDDPR 251
           RVGNYLPGHLNLLASLSG  GGSGRR++DPR
Sbjct: 241 RVGNYLPGHLNLLASLSGAPGGSGRRDEDPR 263

The following BLAST results are available for this feature:

BLAST of CmaCh04G012590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP7_ARATH	2.9e-70	62.26	Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1	[more]
TCP21_ARATH	3.7e-62	57.14	Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1	[more]
TCP14_ARATH	9.0e-32	63.25	Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1	[more]
TCP22_ARATH	2.6e-31	61.90	Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1	[more]
TCP8_ARATH	2.9e-30	66.99	Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1	[more]

BLAST of CmaCh04G012590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX7_CUCSA	8.8e-119	91.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1	[more]
V4VEH8_9ROSI	4.4e-86	71.75	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1	[more]
A0A067ENE6_CITSI	4.4e-86	71.75	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1	[more]
A0A061E220_THECC	3.2e-84	69.74	TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1	[more]
I1LF87_SOYBN	2.3e-82	72.03	Uncharacterized protein OS=Glycine max GN=GLYMA_10G285900 PE=4 SV=1	[more]

BLAST of CmaCh04G012590 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23280.1	1.6e-71	62.26	TCP family transcription factor	[more]
AT5G08330.1	2.1e-63	57.14	TCP family transcription factor	[more]
AT3G47620.1	5.1e-33	63.25	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G72010.1	1.5e-32	61.90	TCP family transcription factor	[more]
AT1G58100.1	1.6e-31	66.99	TCP family transcription factor	[more]

BLAST of CmaCh04G012590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090197\|ref\|XP_008445886.1\|	9.7e-119	91.89	PREDICTED: transcription factor TCP7-like [Cucumis melo]	[more]
gi\|449451743\|ref\|XP_004143620.1\|	1.3e-118	91.51	PREDICTED: transcription factor TCP7-like [Cucumis sativus]	[more]
gi\|567890197\|ref\|XP_006437619.1\|	6.3e-86	71.75	hypothetical protein CICLE_v10032441mg [Citrus clementina]	[more]
gi\|1021569620\|ref\|XP_016176021.1\|	4.5e-84	71.06	PREDICTED: transcription factor TCP7-like [Arachis ipaensis]	[more]
gi\|590689527\|ref\|XP_007043253.1\|	4.5e-84	69.74	TCP family transcription factor [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G012590.1	CmaCh04G012590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 38..126 score: 2.6
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 38..92 score: 28
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 8..165 score: 2.3
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 8..165 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G012590	Cucsa.166230	Cucumber (Gy14) v1	cgycmaB0472
CmaCh04G012590	Cla020050	Watermelon (97103) v1	cmawmB723
CmaCh04G012590	Csa5G175170	Cucumber (Chinese Long) v2	cmacuB746
CmaCh04G012590	MELO3C025049	Melon (DHL92) v3.5.1	cmameB633
CmaCh04G012590	MELO3C011754	Melon (DHL92) v3.5.1	cmameB652
CmaCh04G012590	ClCG02G014110	Watermelon (Charleston Gray)	cmawcgB641
CmaCh04G012590	CSPI05G08570	Wild cucumber (PI 183967)	cmacpiB756
CmaCh04G012590	CmoCh18G008120	Cucurbita moschata (Rifu)	cmacmoB706
CmaCh04G012590	CmoCh04G023470	Cucurbita moschata (Rifu)	cmacmoB745
CmaCh04G012590	CmoCh04G013310	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G012590	Lsi09G008630	Bottle gourd (USVL1VR-Ls)	cmalsiB629
CmaCh04G012590	Lsi04G007920	Bottle gourd (USVL1VR-Ls)	cmalsiB676
CmaCh04G012590	Cp4.1LG09g04990	Cucurbita pepo (Zucchini)	cmacpeB700
CmaCh04G012590	Cp4.1LG01g10190	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G012590	MELO3C025049.2	Melon (DHL92) v3.6.1	cmamedB719
CmaCh04G012590	MELO3C011754.2	Melon (DHL92) v3.6.1	cmamedB739
CmaCh04G012590	CsaV3_5G006010	Cucumber (Chinese Long) v3	cmacucB0884
CmaCh04G012590	Cla97C02G039860	Watermelon (97103) v2	cmawmbB740
CmaCh04G012590	Bhi07G000917	Wax gourd	cmawgoB0905
CmaCh04G012590	CsGy5G005950	Cucumber (Gy14) v2	cgybcmaB673
CmaCh04G012590	Carg02051	Silver-seed gourd	carcmaB1170
CmaCh04G012590	Carg14457	Silver-seed gourd	carcmaB1015
CmaCh04G012590	Carg17778	Silver-seed gourd	carcmaB0666

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G012590	CmaCh18G008100	Cucurbita maxima (Rimu)	cmacmaB402
CmaCh04G012590	CmaCh04G022460	Cucurbita maxima (Rimu)	cmacmaB538

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G012590	Wax gourd	cmawgoB0892