CmaCh18G008100 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G008100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	TCP family transcription factor
Location	Cma_Chr18 : 7082679 .. 7083371 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTCGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCTATTATTGCTGCCACCGGCACCGGCACCACTCCCGCCAATTTCTCTTCCATTTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGTCCCCAGCCGTTCTTTCTTGGCAAACGTGTGAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAAGCATCGGCAGCGAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGATCGTCGTTGA

mRNA sequence

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTCGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCTATTATTGCTGCCACCGGCACCGGCACCACTCCCGCCAATTTCTCTTCCATTTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGTCCCCAGCCGTTCTTTCTTGGCAAACGTGTGAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAAGCATCGGCAGCGAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGATCGTCGTTGA

Coding sequence (CDS)

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTCGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCTATTATTGCTGCCACCGGCACCGGCACCACTCCCGCCAATTTCTCTTCCATTTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGTCCCCAGCCGTTCTTTCTTGGCAAACGTGTGAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAAGCATCGGCAGCGAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGATCGTCGTTGA

Protein sequence

MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR

Homology

[Close]

BLAST of CmaCh18G008100 vs. Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 9.3e-68
Identity = 153/239 (64.02%), Postives = 174/239 (72.80%), Query Frame = 1


Query: 9   SSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 68
           SSNGA I+    QPS    + VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGH
Sbjct: 20  SSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 79

Query: 69  KSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQ 128
           KSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG  +S SL    ++L L    
Sbjct: 80  KSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSLDHKPTSL-LGGTS 139

Query: 129 PFFLGKRVRADDDG---------GTDDGLGVGPSGYWAIPARPDYGQVWSFAAA-----A 188
           PF LGKRVRAD+D          G D+     P+G+WA+PARPD+GQVWSFA A      
Sbjct: 140 PFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWAVPARPDFGQVWSFAGAPQEMFL 199

Query: 189 AAEQGISQPASLFAQQQQ--PIREASAARVGNYLPGHLNLLASLSGGG-GAGRREDDRR 231
             +    QP  +  QQQQ   + EASAARVGNYLPGHLNLLASLSGG  G+ RRE+D R
Sbjct: 200 QQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of CmaCh18G008100 vs. Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.9e-61
Identity = 148/250 (59.20%), Postives = 161/250 (64.40%), Query Frame = 1


Query: 10  SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 69
           SNG  ++   N+   N   AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK
Sbjct: 9   SNGIIVEQTSNKGPLN---AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 68

Query: 70  SDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQP 129
           SDGQTIEWLLRQAEPSIIAATGTGTTPA+F                    ST SLS   P
Sbjct: 69  SDGQTIEWLLRQAEPSIIAATGTGTTPASF--------------------STASLSTSSP 128

Query: 130 FFLGKRV----RADDDGGTDDGL------------GVGPSGYWAIPARPDYGQVWSFAAA 189
           F LGKRV      +  GG   GL            G G  G+WA+PARPD+GQVWSFA  
Sbjct: 129 FTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFATG 188

Query: 190 AAAEQGIS---QPASLFAQQQQ----------PIREASAARVGNYLPG-HLNLLASLSGG 229
           A  E   +   QPA+LF + QQ           + EASAARVGNYLPG HLNLLASLSGG
Sbjct: 189 APPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGG 235

[Close]

BLAST of CmaCh18G008100 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.5e-33
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 1


Query: 25  NGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 84
           +  +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 85  RQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSS 118
           +QAEPS+IAATGTGT PANF+S+++S+R +GSS SL S
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPS 199

[Close]

BLAST of CmaCh18G008100 vs. Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.8e-32
Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 1


Query: 17  THKNQPSSNGALAVKKP----PSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 76
           T     SS  ALAV K     P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 77  QTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQPFFL 136
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  G S   S  +   S S P  F  
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASK--SSSSPLSFHS 160

Query: 137 GKRVRADDDGGTDDGLGVGPS 154
                 +D+ GT +G  V PS
Sbjct: 161 TGMSLYEDNNGT-NGSSVDPS 178

[Close]

BLAST of CmaCh18G008100 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 67/98 (68.37%), Postives = 81/98 (82.65%), Query Frame = 1


Query: 23  SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 82
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 83  EPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 121
           EP+I+AATGTGT PANFS++S+S+R +GS+ S   + S
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPSKS 145

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BLAST of CmaCh18G008100 vs. TrEMBL
Match: A0A0A0KPX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.8e-95
Identity = 206/257 (80.16%), Postives = 212/257 (82.49%), Query Frame = 1


Query: 1   MSNSE-TADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+ T   SNGA IDTHKN  SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN-GSSASL--- 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGN G SASL   
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQ------PFFLGKRVRADDDGGTDDGLGV-----------GPSGYWAI 180
           SSTTSTLSLSRPQ      PF LGKRVR+DDD   DD LGV           GP GYWAI
Sbjct: 121 SSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYWAI 180

Query: 181 PARPDYGQVWSFAAAAAAEQ-----GISQPASLFAQQQQPIREASAARVGNYLPGHLNLL 231
           PARPDYGQVWSFAAAA +E      GI+Q ASLFAQQQQPIREASAARVGNYLPGHLNLL
Sbjct: 181 PARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLNLL 240

[Close]

BLAST of CmaCh18G008100 vs. TrEMBL
Match: V4VEH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77
Identity = 176/268 (65.67%), Postives = 196/268 (73.13%), Query Frame = 1


Query: 1   MSNSETADS--SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60
           MSNS+ A +  SNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAAR
Sbjct: 1   MSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60

Query: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSST 120
           VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG G+S SLSST
Sbjct: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSST 120

Query: 121 TSTLSLSR---------PQPFFLGKRVRADDDG--GTDDGLGVGPS-------------G 180
            S+ ++S          P PF LGKRVR+DDDG  G D    VGP+             G
Sbjct: 121 VSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAAAEQGI-----------SQPASLFAQQQQPIREASAARVG 231
           +WA+PARPD+GQVWSFAAAAA E  +            QP  LF   QQ + EASAARVG
Sbjct: 181 FWALPARPDFGQVWSFAAAAAPEMVVQAASQQQHHHHQQPHQLF--MQQAMGEASAARVG 240

[Close]

BLAST of CmaCh18G008100 vs. TrEMBL
Match: A0A067ENE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77
Identity = 176/268 (65.67%), Postives = 196/268 (73.13%), Query Frame = 1


Query: 1   MSNSETADS--SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60
           MSNS+ A +  SNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAAR
Sbjct: 1   MSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60

Query: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSST 120
           VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG G+S SLSST
Sbjct: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSST 120

Query: 121 TSTLSLSR---------PQPFFLGKRVRADDDG--GTDDGLGVGPS-------------G 180
            S+ ++S          P PF LGKRVR+DDDG  G D    VGP+             G
Sbjct: 121 VSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAAAEQGI-----------SQPASLFAQQQQPIREASAARVG 231
           +WA+PARPD+GQVWSFAAAAA E  +            QP  LF   QQ + EASAARVG
Sbjct: 181 FWALPARPDFGQVWSFAAAAAPEMVVQAASQQQHHHHQQPHQLF--MQQAMGEASAARVG 240

[Close]

BLAST of CmaCh18G008100 vs. TrEMBL
Match: A0A061E220_THECC (TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.5e-77
Identity = 173/264 (65.53%), Postives = 192/264 (72.73%), Query Frame = 1


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSE   ++NGA +D  + Q   NG+L VKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSE-GGATNGAIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG  +S SLSST S
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSLSSTIS 120

Query: 121 TLSLSR-----PQPFFLGKRVRADDDGGTDDGLGV--------------GPSGYWAIPAR 180
           + SL       P PF LGKRVRADDD    D  GV              G  G+WA+PAR
Sbjct: 121 SSSLDHKPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGGFWAVPAR 180

Query: 181 PDYGQVWSF------------AAAAAAEQGISQP--ASLFAQQQQPIREASAARVGNYLP 231
           PD+GQVWSF            AAAAAA     QP  A+LF QQQQ + EASAARVGNYLP
Sbjct: 181 PDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAARVGNYLP 240

[Close]

BLAST of CmaCh18G008100 vs. TrEMBL
Match: A0A0D2VBM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G068600 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.9e-75
Identity = 172/257 (66.93%), Postives = 194/257 (75.49%), Query Frame = 1


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSE A + NGA +DT + Q   NGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSEAA-AKNGATMDTQRQQAPGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG  +S SL STTS
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSLPSTTS 120

Query: 121 TLSLSRP----QPFFLGKRVRADDD-GGTDD--------GLG--VGPSG-----YWAIPA 180
           +    +P     PF LGKRVR DDD  G DD        G+G  VGP+G     +WA+PA
Sbjct: 121 SSLDHKPLLGSTPFLLGKRVRPDDDNAGKDDSGGATVGPGVGSIVGPAGTHTGAFWAVPA 180

Query: 181 RPDYGQVWSFAAAAAAEQGI----SQP--ASLFAQQQQPIREASAARVGNYLPGHLNLLA 231
           RPD+GQ+WSFA     E  +     QP  A+ F QQQQ + EASAARVGNYLPGHLNLLA
Sbjct: 181 RPDFGQIWSFAPPPPPEMVVQTAAQQPAAAAFFVQQQQAMGEASAARVGNYLPGHLNLLA 240

[Close]

BLAST of CmaCh18G008100 vs. TAIR10
Match: AT5G23280.1 (AT5G23280.1 TCP family transcription factor )

HSP 1 Score: 258.1 bits (658), Expect = 5.3e-69
Identity = 153/239 (64.02%), Postives = 174/239 (72.80%), Query Frame = 1


Query: 9   SSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 68
           SSNGA I+    QPS    + VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGH
Sbjct: 20  SSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 79

Query: 69  KSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQ 128
           KSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG  +S SL    ++L L    
Sbjct: 80  KSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSLDHKPTSL-LGGTS 139

Query: 129 PFFLGKRVRADDDG---------GTDDGLGVGPSGYWAIPARPDYGQVWSFAAA-----A 188
           PF LGKRVRAD+D          G D+     P+G+WA+PARPD+GQVWSFA A      
Sbjct: 140 PFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWAVPARPDFGQVWSFAGAPQEMFL 199

Query: 189 AAEQGISQPASLFAQQQQ--PIREASAARVGNYLPGHLNLLASLSGGG-GAGRREDDRR 231
             +    QP  +  QQQQ   + EASAARVGNYLPGHLNLLASLSGG  G+ RRE+D R
Sbjct: 200 QQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of CmaCh18G008100 vs. TAIR10
Match: AT5G08330.1 (AT5G08330.1 TCP family transcription factor )

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-62
Identity = 148/250 (59.20%), Postives = 161/250 (64.40%), Query Frame = 1


Query: 10  SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 69
           SNG  ++   N+   N   AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK
Sbjct: 9   SNGIIVEQTSNKGPLN---AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 68

Query: 70  SDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQP 129
           SDGQTIEWLLRQAEPSIIAATGTGTTPA+F                    ST SLS   P
Sbjct: 69  SDGQTIEWLLRQAEPSIIAATGTGTTPASF--------------------STASLSTSSP 128

Query: 130 FFLGKRV----RADDDGGTDDGL------------GVGPSGYWAIPARPDYGQVWSFAAA 189
           F LGKRV      +  GG   GL            G G  G+WA+PARPD+GQVWSFA  
Sbjct: 129 FTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFATG 188

Query: 190 AAAEQGIS---QPASLFAQQQQ----------PIREASAARVGNYLPG-HLNLLASLSGG 229
           A  E   +   QPA+LF + QQ           + EASAARVGNYLPG HLNLLASLSGG
Sbjct: 189 APPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSGG 235

[Close]

BLAST of CmaCh18G008100 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 142.1 bits (357), Expect = 4.2e-34
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 1


Query: 25  NGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 84
           +  +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 85  RQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSS 118
           +QAEPS+IAATGTGT PANF+S+++S+R +GSS SL S
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPS 199

[Close]

BLAST of CmaCh18G008100 vs. TAIR10
Match: AT1G72010.1 (AT1G72010.1 TCP family transcription factor )

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 1


Query: 17  THKNQPSSNGALAVKKP----PSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 76
           T     SS  ALAV K     P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 77  QTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQPFFL 136
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  G S   S  +   S S P  F  
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASK--SSSSPLSFHS 160

Query: 137 GKRVRADDDGGTDDGLGVGPS 154
                 +D+ GT +G  V PS
Sbjct: 161 TGMSLYEDNNGT-NGSSVDPS 178

[Close]

BLAST of CmaCh18G008100 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 134.8 bits (338), Expect = 6.7e-32
Identity = 67/98 (68.37%), Postives = 81/98 (82.65%), Query Frame = 1


Query: 23  SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 82
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 83  EPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 121
           EP+I+AATGTGT PANFS++S+S+R +GS+ S   + S
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPSKS 145

[Close]

BLAST of CmaCh18G008100 vs. NCBI nr
Match: gi|659090197|ref|XP_008445886.1| (PREDICTED: transcription factor TCP7-like [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 1.6e-96
Identity = 209/257 (81.32%), Postives = 215/257 (83.66%), Query Frame = 1


Query: 1   MSNSE-TADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+ T   SN AAID+HKNQ SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN-GSSASL--- 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGN G SASL   
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQ------PFFLGKRVRADDDGGTDDGLGV-----------GPSGYWAI 180
           SSTTSTLSLSRPQ      PF LGKRVR+DDD   DDGLGV           GP GYWAI
Sbjct: 121 SSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-AKDDGLGVGQAVGSIVGPTGPGGYWAI 180

Query: 181 PARPDYGQVWSFAAAAAAEQ-----GISQPASLFAQQQQPIREASAARVGNYLPGHLNLL 231
           PARPDYGQVWSFAAAA +E      GISQ ASLFAQQQQPIREASAARVGNYLPGHLNLL
Sbjct: 181 PARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLL 240

[Close]

BLAST of CmaCh18G008100 vs. NCBI nr
Match: gi|449451743|ref|XP_004143620.1| (PREDICTED: transcription factor TCP7-like [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 4.0e-95
Identity = 206/257 (80.16%), Postives = 212/257 (82.49%), Query Frame = 1


Query: 1   MSNSE-TADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+ T   SNGA IDTHKN  SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN-GSSASL--- 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGN G SASL   
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQ------PFFLGKRVRADDDGGTDDGLGV-----------GPSGYWAI 180
           SSTTSTLSLSRPQ      PF LGKRVR+DDD   DD LGV           GP GYWAI
Sbjct: 121 SSTTSTLSLSRPQPLSGPTPFILGKRVRSDDD-AKDDALGVGQAVGSIVGPTGPGGYWAI 180

Query: 181 PARPDYGQVWSFAAAAAAEQ-----GISQPASLFAQQQQPIREASAARVGNYLPGHLNLL 231
           PARPDYGQVWSFAAAA +E      GI+Q ASLFAQQQQPIREASAARVGNYLPGHLNLL
Sbjct: 181 PARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLNLL 240

[Close]

BLAST of CmaCh18G008100 vs. NCBI nr
Match: gi|567890197|ref|XP_006437619.1| (hypothetical protein CICLE_v10032441mg [Citrus clementina])

HSP 1 Score: 297.7 bits (761), Expect = 1.7e-77
Identity = 176/268 (65.67%), Postives = 196/268 (73.13%), Query Frame = 1


Query: 1   MSNSETADS--SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60
           MSNS+ A +  SNGA ID  + QP  NGAL VKKPPSKDRHSKVDGRGRRIRMPIICAAR
Sbjct: 1   MSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAAR 60

Query: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSST 120
           VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG G+S SLSST
Sbjct: 61  VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGNSTSLSST 120

Query: 121 TSTLSLSR---------PQPFFLGKRVRADDDG--GTDDGLGVGPS-------------G 180
            S+ ++S          P PF LGKRVR+DDDG  G D    VGP+             G
Sbjct: 121 VSSSAISAALEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAAAEQGI-----------SQPASLFAQQQQPIREASAARVG 231
           +WA+PARPD+GQVWSFAAAAA E  +            QP  LF   QQ + EASAARVG
Sbjct: 181 FWALPARPDFGQVWSFAAAAAPEMVVQAASQQQHHHHQQPHQLF--MQQAMGEASAARVG 240

[Close]

BLAST of CmaCh18G008100 vs. NCBI nr
Match: gi|590689527|ref|XP_007043253.1| (TCP family transcription factor [Theobroma cacao])

HSP 1 Score: 295.8 bits (756), Expect = 6.4e-77
Identity = 173/264 (65.53%), Postives = 192/264 (72.73%), Query Frame = 1


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSE   ++NGA +D  + Q   NG+L VKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSE-GGATNGAIMDPQRQQAPGNGSLVVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG  +S SLSST S
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSLSSTIS 120

Query: 121 TLSLSR-----PQPFFLGKRVRADDDGGTDDGLGV--------------GPSGYWAIPAR 180
           + SL       P PF LGKRVRADDD    D  GV              G  G+WA+PAR
Sbjct: 121 SSSLDHKPLLGPTPFILGKRVRADDDNAGKDDSGVVSLGPGVGSIVGPAGTGGFWAVPAR 180

Query: 181 PDYGQVWSF------------AAAAAAEQGISQP--ASLFAQQQQPIREASAARVGNYLP 231
           PD+GQVWSF            AAAAAA     QP  A+LF QQQQ + EASAARVGNYLP
Sbjct: 181 PDFGQVWSFAPPPPPEMVVQTAAAAAAAAAAQQPAAAALFVQQQQAMGEASAARVGNYLP 240

[Close]

BLAST of CmaCh18G008100 vs. NCBI nr
Match: gi|823261021|ref|XP_012463239.1| (PREDICTED: transcription factor TCP21 [Gossypium raimondii])

HSP 1 Score: 290.4 bits (742), Expect = 2.7e-75
Identity = 172/257 (66.93%), Postives = 194/257 (75.49%), Query Frame = 1


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSE A + NGA +DT + Q   NGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSEAA-AKNGATMDTQRQQAPGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS++S+SVRG  +S SL STTS
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGANSTSLPSTTS 120

Query: 121 TLSLSRP----QPFFLGKRVRADDD-GGTDD--------GLG--VGPSG-----YWAIPA 180
           +    +P     PF LGKRVR DDD  G DD        G+G  VGP+G     +WA+PA
Sbjct: 121 SSLDHKPLLGSTPFLLGKRVRPDDDNAGKDDSGGATVGPGVGSIVGPAGTHTGAFWAVPA 180

Query: 181 RPDYGQVWSFAAAAAAEQGI----SQP--ASLFAQQQQPIREASAARVGNYLPGHLNLLA 231
           RPD+GQ+WSFA     E  +     QP  A+ F QQQQ + EASAARVGNYLPGHLNLLA
Sbjct: 181 RPDFGQIWSFAPPPPPEMVVQTAAQQPAAAAFFVQQQQAMGEASAARVGNYLPGHLNLLA 240

The following BLAST results are available for this feature:

BLAST of CmaCh18G008100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP7_ARATH	9.3e-68	64.02	Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1	[more]
TCP21_ARATH	2.9e-61	59.20	Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1	[more]
TCP14_ARATH	7.5e-33	72.45	Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1	[more]
TCP22_ARATH	2.8e-32	58.16	Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1	[more]
TCP8_ARATH	1.2e-30	68.37	Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1	[more]

BLAST of CmaCh18G008100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX7_CUCSA	2.8e-95	80.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175170 PE=4 SV=1	[more]
V4VEH8_9ROSI	1.2e-77	65.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032441mg PE=4 SV=1	[more]
A0A067ENE6_CITSI	1.2e-77	65.67	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024547mg PE=4 SV=1	[more]
A0A061E220_THECC	4.5e-77	65.53	TCP family transcription factor OS=Theobroma cacao GN=TCM_007700 PE=4 SV=1	[more]
A0A0D2VBM4_GOSRA	1.9e-75	66.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G068600 PE=4 SV=1	[more]

BLAST of CmaCh18G008100 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23280.1	5.3e-69	64.02	TCP family transcription factor	[more]
AT5G08330.1	1.6e-62	59.20	TCP family transcription factor	[more]
AT3G47620.1	4.2e-34	72.45	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G72010.1	1.6e-33	58.16	TCP family transcription factor	[more]
AT1G58100.1	6.7e-32	68.37	TCP family transcription factor	[more]

BLAST of CmaCh18G008100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090197\|ref\|XP_008445886.1\|	1.6e-96	81.32	PREDICTED: transcription factor TCP7-like [Cucumis melo]	[more]
gi\|449451743\|ref\|XP_004143620.1\|	4.0e-95	80.16	PREDICTED: transcription factor TCP7-like [Cucumis sativus]	[more]
gi\|567890197\|ref\|XP_006437619.1\|	1.7e-77	65.67	hypothetical protein CICLE_v10032441mg [Citrus clementina]	[more]
gi\|590689527\|ref\|XP_007043253.1\|	6.4e-77	65.53	TCP family transcription factor [Theobroma cacao]	[more]
gi\|823261021\|ref\|XP_012463239.1\|	2.7e-75	66.93	PREDICTED: transcription factor TCP21 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G008100.1	CmaCh18G008100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 35..125 score: 7.4
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 35..89 score: 28
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 1..153 score: 1.5
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 1..153 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G008100	Cla020050	Watermelon (97103) v1	cmawmB397
CmaCh18G008100	MELO3C011754	Melon (DHL92) v3.5.1	cmameB355
CmaCh18G008100	ClCG02G014110	Watermelon (Charleston Gray)	cmawcgB353
CmaCh18G008100	CmoCh18G008120	Cucurbita moschata (Rifu)	cmacmoB406
CmaCh18G008100	CmoCh04G013310	Cucurbita moschata (Rifu)	cmacmoB420
CmaCh18G008100	Lsi04G007920	Bottle gourd (USVL1VR-Ls)	cmalsiB384
CmaCh18G008100	Lsi04G007100	Bottle gourd (USVL1VR-Ls)	cmalsiB380
CmaCh18G008100	Cp4.1LG09g04990	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G008100	Cp4.1LG01g10190	Cucurbita pepo (Zucchini)	cmacpeB429
CmaCh18G008100	MELO3C011835.2	Melon (DHL92) v3.6.1	cmamedB409
CmaCh18G008100	MELO3C011754.2	Melon (DHL92) v3.6.1	cmamedB412
CmaCh18G008100	CsaV3_5G029900	Cucumber (Chinese Long) v3	cmacucB0499
CmaCh18G008100	Cla97C02G039860	Watermelon (97103) v2	cmawmbB411
CmaCh18G008100	Bhi07G000917	Wax gourd	cmawgoB0546
CmaCh18G008100	Carg02051	Silver-seed gourd	carcmaB1167
CmaCh18G008100	Carg14457	Silver-seed gourd	carcmaB1012

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G008100	CmaCh04G012590	Cucurbita maxima (Rimu)	cmacmaB402

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G008100	Wax gourd	cmawgoB0543