Cp4.1LG01g06740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g06740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPeptidylprolyl isomerase
LocationCp4.1LG01 : 4034614 .. 4037163 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATTTCATAAATATTAATTACTGAGAGGGCTAGATATTTCCCAAGCATTGGAACGGACGGTAGAGATTGGATCACTAGCTGTAACGAACCGCAGTGGAAAAGCCTCTCCGCTTTTCTGGAAGTATCTAATAATATATATATTCTCGACTCTCTCGTGCCCATCATTGCCAAGAGTTCGTCACTGTCTCCACCAATCTAAGTGAAAGGAAAAAGCGAGGGCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCGCATACTGATCTCATTTCTCTATTATCTTGATTTTTTTGGCCATTACGTAGAGTAATTGTTTCTTTTTGCTTGCCATTTCTTGTTGGATTTGTGTAGTTTTCAGTCTGGAATTAGATAGGATTCGCTTTATCATGCATTGAACCTGGAACCCTAGACTTAACCGTGAGAAATCTTGGTGTTTGGATTGCGGTATTGCTAGTTCGAGATATTAGATTTAGGTTTCAGTTCAATGAATTTTATTTACAGGCAGGATATCTATGAATCGCTTGGATTCAATTGGAGATGTGTGTCTATTGTATTTACGTATTTGCTTCGTGTAAGGTTTGGAATTCTTCTTGTTTTGGTTTGAATTGAAATAGTACAGGATACTATCGTGGATGATTATTCCCTGCCGCTCTCGGATACCAAACATAATTTGTTGAATTGTGGTCTATGATTGAGGAACTTTGTTATACCTCAATTTCTAAGTTGAATTTCACTTTATGAAAAAACTATAATGATAATGCTCAAACAATTATCACAAGGTCGTGATTACTTTTGGACTTTGCGATGAAGTTGTGTGATACCGTGATGAATATTACCAGTTATGTAGACCATTTTACTTGAAAACCGATGAAAGGATTACTTACTCAGTACTTGATTTTAGCTAAATGGTTAAATCAACCATTCAATCTGAATATCCGTTTAGAGCCTTTCTCATATATGGGTAAAAAGTGAGAACGTCAACACTTTGAAAGTGTCTCTATCAAGAAAATTTCTACCTGCTGGTGTGGAGACTTTTTTGCTCCAGTAAATACTTTAGATTTAATAATTCCATGAGATCTAGGAACTTAGCTTTGGAAATCAAAGGGAGAGGTGGAGATGTAGCAATAGTTTTACTTGTTAGTAATATTTCACTATAATCTGGTATAATCAGACCCACACATCAAAAGAATTAAAACAACAAAATTTGAACAACCCTTTCTGGTAAAATTGGTTCTATCTAGGATTGCAGTTCTCTTTTCCCCCACTGAAATGTATACTTCGTTAGTGTAGATGGAGCCATAATTTTTCATGGGGAGAGGCAAACTCTTAGCTTTGCACTTTTCATACATATGAAATAAATTTCCAATTCTAAACATTTAGTAGAGAAAATTTGAGAGAAAAAATTATAAATTGAAACTTGTATACAACTTTTTAAATCTAAAATGAACCGAGCCCTCCTCTTTCTGCTACACCCCTGGTTGTGTCTTGCTAGAAATTTGTAGTCGTATACTCTCCTTCCAAGCCCGATTGGTAAAATCCCAGAGAGTAATTGTGTTCGGTAGTTCAATAGCAGGTACATTCGGACATTTTCTAGGATCACAAGGATATGCTATGATGTTTTGTTCGTAAGCAAGCTGATATTTTATTCTAGCAATTGTATTTGTGTGGATTAGCACAATGTAGAATGCGTCTAAATGAGCAACACACTGACGTTATTGCAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCTCCTTAGTGATGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTACAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTGACCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGATATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGTGTCTTTTAATTACGCCTCATTTGTCTGCTCAACCTCCTAGGATTATTGGGTAGGAAATGGGAATTTTTCTGAAACGTTTTTCTTTTGGAAACTTT

mRNA sequence

AGATTTCATAAATATTAATTACTGAGAGGGCTAGATATTTCCCAAGCATTGGAACGGACGGTAGAGATTGGATCACTAGCTGTAACGAACCGCAGTGGAAAAGCCTCTCCGCTTTTCTGGAAGTATCTAATAATATATATATTCTCGACTCTCTCGTGCCCATCATTGCCAAGAGTTCGTCACTGTCTCCACCAATCTAAGTGAAAGGAAAAAGCGAGGGCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCTCCTTAGTGATGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTACAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTGACCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGATATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGTGTCTTTTAATTACGCCTCATTTGTCTGCTCAACCTCCTAGGATTATTGGGTAGGAAATGGGAATTTTTCTGAAACGTTTTTCTTTTGGAAACTTT

Coding sequence (CDS)

ATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAA

Protein sequence

MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA
Homology
[Close]
BLAST of Cp4.1LG01g06740 vs. Swiss-Prot
Match: PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 1 

Query: 3   SSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKF 62
           SS+A  QVRASHILIKHQGSRR ASWKDPEG+II+NTTRDSAVSQL  +RDDI+SGK+KF
Sbjct: 2   SSSAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKF 61

Query: 63  EDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
           +D+A+R SDCSSAKRGGDLGPFGR QMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 62  DDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRT 120

[Close]
BLAST of Cp4.1LG01g06740 vs. Swiss-Prot
Match: PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-48
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 1 

Query: 5   AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of Cp4.1LG01g06740 vs. Swiss-Prot
Match: PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-44
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 1 

Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 68
           +VRASHILIKHQGSRR +SWKDP+G +I  TTRD AVSQL  +R +++S  + F D+ASR
Sbjct: 5   KVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDLASR 64

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
            S CSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 65  HSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 117

[Close]
BLAST of Cp4.1LG01g06740 vs. Swiss-Prot
Match: PIN1_RHIO9 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=pin1 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-26
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 1 

Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 68
           +VRASH+LIK + SRRP+SW++         +++ A+  LT  +  I SG+     +A+ 
Sbjct: 41  RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 100

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
            SDC+SAKRGGDLG F RGQMQKPFEEATFAL+VGE+S  V TDSGVH+I RTA
Sbjct: 101 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150

[Close]
BLAST of Cp4.1LG01g06740 vs. Swiss-Prot
Match: PIN1_MOUSE (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus GN=Pin1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.0e-26
Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 1 

Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 68
           +VR SH+L+KH  SRRP+SW+  +       +++ A+  +      I SG+  FE +AS+
Sbjct: 56  KVRCSHLLVKHSQSRRPSSWRQEK----ITRSKEEALELINGYIQKIKSGEEDFESLASQ 115

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
            SDCSSAK  GDLGPF RGQMQKPFE+A+FAL+ GE+S  V TDSG+HII RT
Sbjct: 116 FSDCSSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 164

[Close]
BLAST of Cp4.1LG01g06740 vs. TrEMBL
Match: A0A0A0KZK7_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.3e-56
Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of Cp4.1LG01g06740 vs. TrEMBL
Match: A7DX09_LOTJA (Peptidylprolyl isomerase OS=Lotus japonicus GN=pin1 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-52
Identity = 103/121 (85.12%), Postives = 118/121 (97.52%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS+++G+VRASHILIKHQGSRR ASWKDPEGR+IKNTTR+SAV+QL+ +R+DI+SGK+
Sbjct: 1   MSSSSSSGEVRASHILIKHQGSRRKASWKDPEGRVIKNTTRESAVAQLSTLREDILSGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
            FEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVG++S+IVDTDSGVHIIKR
Sbjct: 61  NFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGDISEIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Cp4.1LG01g06740 vs. TrEMBL
Match: A0A061DFC2_THECC (Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.0e-51
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS AA QVRA+HILIKHQGSRR ASWKDPEGR+I NTTRD+AVSQL  +RDDI+SGK+
Sbjct: 62  MSSSTAANQVRAAHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIVSGKA 121

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KF++VASR SDCSSAKRGGDLGPFGRGQMQKPFE AT+ALKVGE+SDIVDTDSGVHII R
Sbjct: 122 KFDEVASRYSDCSSAKRGGDLGPFGRGQMQKPFENATYALKVGEISDIVDTDSGVHIIMR 181

Query: 121 T 122
           T
Sbjct: 182 T 182

[Close]
BLAST of Cp4.1LG01g06740 vs. TrEMBL
Match: A0A0L9TNV5_PHAAN (Peptidylprolyl isomerase OS=Phaseolus angularis GN=LR48_Vigan01g179100 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.5e-51
Identity = 102/121 (84.30%), Postives = 111/121 (91.74%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS   G++RASHILIKH+GSRR ASWKDPEGRIIKNTTR++AVSQL  +RDDI+SGK+
Sbjct: 1   MSSSKVGGEIRASHILIKHEGSRRKASWKDPEGRIIKNTTREAAVSQLKALRDDIVSGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
            FEDVASR SDC SAKRGGDLGPFGRGQMQKPFEEAT ALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  TFEDVASRFSDCGSAKRGGDLGPFGRGQMQKPFEEATLALKVGELSDIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Cp4.1LG01g06740 vs. TrEMBL
Match: A0A0S3R4J9_PHAAN (Peptidylprolyl isomerase OS=Vigna angularis var. angularis GN=Vigan.01G326000 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.5e-51
Identity = 102/121 (84.30%), Postives = 111/121 (91.74%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS   G++RASHILIKH+GSRR ASWKDPEGRIIKNTTR++AVSQL  +RDDI+SGK+
Sbjct: 1   MSSSKVGGEIRASHILIKHEGSRRKASWKDPEGRIIKNTTREAAVSQLKALRDDIVSGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
            FEDVASR SDC SAKRGGDLGPFGRGQMQKPFEEAT ALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  TFEDVASRFSDCGSAKRGGDLGPFGRGQMQKPFEEATLALKVGELSDIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Cp4.1LG01g06740 vs. TAIR10
Match: AT2G18040.1 (AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1)

HSP 1 Score: 193.4 bits (490), Expect = 8.4e-50
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 1 

Query: 5   AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of Cp4.1LG01g06740 vs. TAIR10
Match: AT1G26550.1 (AT1G26550.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07
Identity = 35/109 (32.11%), Postives = 49/109 (44.95%), Query Frame = 1 

Query: 10  VRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRI 69
           V+A H+L + QG    A  K  +G +        A                +F  +A+  
Sbjct: 43  VKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPA----------------EFAKIAAEY 102

Query: 70  SDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHII 119
           S+C S K+GGDLG F RG+M  PF++  F   VG  S    +  G HII
Sbjct: 103 SECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHII 135

[Close]
BLAST of Cp4.1LG01g06740 vs. NCBI nr
Match: gi|659102324|ref|XP_008452069.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-57
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of Cp4.1LG01g06740 vs. NCBI nr
Match: gi|449457542|ref|XP_004146507.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 3.3e-56
Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of Cp4.1LG01g06740 vs. NCBI nr
Match: gi|152955221|emb|CAM59671.1| (parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus])

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-52
Identity = 103/121 (85.12%), Postives = 118/121 (97.52%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS+++G+VRASHILIKHQGSRR ASWKDPEGR+IKNTTR+SAV+QL+ +R+DI+SGK+
Sbjct: 1   MSSSSSSGEVRASHILIKHQGSRRKASWKDPEGRVIKNTTRESAVAQLSTLREDILSGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
            FEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVG++S+IVDTDSGVHIIKR
Sbjct: 61  NFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGDISEIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Cp4.1LG01g06740 vs. NCBI nr
Match: gi|743839408|ref|XP_011025935.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Populus euphratica])

HSP 1 Score: 211.8 bits (538), Expect = 6.5e-52
Identity = 104/121 (85.95%), Postives = 114/121 (94.21%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           M+SSA+  QVRASHILIKH+GSRR ASWKDPEGR+IKNTTRDSA+SQL  IR+DI+SGK+
Sbjct: 1   MASSASGTQVRASHILIKHEGSRRKASWKDPEGRVIKNTTRDSAISQLKAIREDIVSGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEE TF+LKVGE+SDIVDTDSGVHII R
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEETTFSLKVGEISDIVDTDSGVHIILR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Cp4.1LG01g06740 vs. NCBI nr
Match: gi|590702875|ref|XP_007046727.1| (Peptidylprolyl cis/trans isomerase [Theobroma cacao])

HSP 1 Score: 208.4 bits (529), Expect = 7.2e-51
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = 1 

Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS AA QVRA+HILIKHQGSRR ASWKDPEGR+I NTTRD+AVSQL  +RDDI+SGK+
Sbjct: 62  MSSSTAANQVRAAHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIVSGKA 121

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KF++VASR SDCSSAKRGGDLGPFGRGQMQKPFE AT+ALKVGE+SDIVDTDSGVHII R
Sbjct: 122 KFDEVASRYSDCSSAKRGGDLGPFGRGQMQKPFENATYALKVGEISDIVDTDSGVHIIMR 181

Query: 121 T 122
           T
Sbjct: 182 T 182

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g06740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PIN1_MALDO1.3e-5285.71Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1[more]
PIN1_ARATH1.5e-4879.66Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV... [more]
PIN1_DIGLA1.3e-4477.88Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV... [more]
PIN1_RHIO96.1e-2656.14Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 /... [more]
PIN1_MOUSE8.0e-2653.10Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus GN=Pin1 P... [more]
BLAST of Cp4.1LG01g06740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZK7_CUCSA2.3e-5691.80Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1[more]
A7DX09_LOTJA1.6e-5285.12Peptidylprolyl isomerase OS=Lotus japonicus GN=pin1 PE=2 SV=1[more]
A0A061DFC2_THECC5.0e-5184.30Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1[more]
A0A0L9TNV5_PHAAN6.5e-5184.30Peptidylprolyl isomerase OS=Phaseolus angularis GN=LR48_Vigan01g179100 PE=4 SV=1[more]
A0A0S3R4J9_PHAAN6.5e-5184.30Peptidylprolyl isomerase OS=Vigna angularis var. angularis GN=Vigan.01G326000 PE... [more]
BLAST of Cp4.1LG01g06740 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18040.18.4e-5079.66 peptidylprolyl cis/trans isomerase, NIMA-interacting 1[more]
AT1G26550.11.8e-0732.11 FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
BLAST of Cp4.1LG01g06740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102324|ref|XP_008452069.1|2.3e-5794.26PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo][more]
gi|449457542|ref|XP_004146507.1|3.3e-5691.80PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus][more]
gi|152955221|emb|CAM59671.1|2.2e-5285.12parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus][more]
gi|743839408|ref|XP_011025935.1|6.5e-5285.95PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Populus euphratica][more]
gi|590702875|ref|XP_007046727.1|7.2e-5184.30Peptidylprolyl cis/trans isomerase [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR023058PPIase_PpiC_CS
IPR000297PPIase_PpiC
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0009853 photorespiration
biological_process GO:0006833 water transport
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009651 response to salt stress
biological_process GO:0051788 response to misfolded protein
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005575 cellular_component
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0016853 isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06740.1Cp4.1LG01g06740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 14..121
score: 8.9
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROFILEPS50198PPIC_PPIASE_2coord: 7..122
score: 28
IPR023058Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved sitePROSITEPS01096PPIC_PPIASE_1coord: 62..82
scor
NoneNo IPR availableGENE3DG3DSA:3.10.50.40coord: 9..121
score: 5.2
NoneNo IPR availablePANTHERPTHR10657PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 9..121
score: 1.6
NoneNo IPR availablePANTHERPTHR10657:SF4PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1coord: 9..121
score: 1.6
NoneNo IPR availableunknownSSF54534FKBP-likecoord: 7..121
score: 2.75

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g06740Cucsa.106590Cucumber (Gy14) v1cgycpeB0238
Cp4.1LG01g06740CmaCh16G006120Cucurbita maxima (Rimu)cmacpeB354
Cp4.1LG01g06740CmaCh04G007520Cucurbita maxima (Rimu)cmacpeB731
Cp4.1LG01g06740CmoCh04G008010Cucurbita moschata (Rifu)cmocpeB684
Cp4.1LG01g06740CmoCh16G006680Cucurbita moschata (Rifu)cmocpeB316
Cp4.1LG01g06740Cla014591Watermelon (97103) v1cpewmB420
Cp4.1LG01g06740Csa4G046790Cucumber (Chinese Long) v2cpecuB400
Cp4.1LG01g06740ClCG07G008440Watermelon (Charleston Gray)cpewcgB412
Cp4.1LG01g06740CSPI04G05560Wild cucumber (PI 183967)cpecpiB397
Cp4.1LG01g06740Lsi07G002610Bottle gourd (USVL1VR-Ls)cpelsiB373
Cp4.1LG01g06740MELO3C016378.2Melon (DHL92) v3.6.1cpemedB496
Cp4.1LG01g06740CsaV3_4G005720Cucumber (Chinese Long) v3cpecucB0497
Cp4.1LG01g06740Bhi01G001840Wax gourdcpewgoB0510
Cp4.1LG01g06740CsGy4G005440Cucumber (Gy14) v2cgybcpeB502
Cp4.1LG01g06740Carg05735Silver-seed gourdcarcpeB1418
Cp4.1LG01g06740Carg14150Silver-seed gourdcarcpeB1303
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g06740Cp4.1LG14g01860Cucurbita pepo (Zucchini)cpecpeB237
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g06740Silver-seed gourdcarcpeB1302
Cp4.1LG01g06740Silver-seed gourdcarcpeB1417
Cp4.1LG01g06740Cucumber (Chinese Long) v3cpecucB0580
Cp4.1LG01g06740Wax gourdcpewgoB0511
Cp4.1LG01g06740Cucurbita pepo (Zucchini)cpecpeB073
Cp4.1LG01g06740Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g06740Cucurbita pepo (Zucchini)cpecpeB385
Cp4.1LG01g06740Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g06740Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g06740Cucurbita maxima (Rimu)cmacpeB876
Cp4.1LG01g06740Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g06740Cucurbita moschata (Rifu)cmocpeB613
Cp4.1LG01g06740Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g06740Cucurbita moschata (Rifu)cmocpeB813
Cp4.1LG01g06740Wild cucumber (PI 183967)cpecpiB468
Cp4.1LG01g06740Watermelon (Charleston Gray)cpewcgB374
Cp4.1LG01g06740Watermelon (97103) v1cpewmB443
Cp4.1LG01g06740Melon (DHL92) v3.5.1cpemeB424
Cp4.1LG01g06740Melon (DHL92) v3.5.1cpemeB434
Cp4.1LG01g06740Cucumber (Gy14) v2cgybcpeB807
Cp4.1LG01g06740Melon (DHL92) v3.6.1cpemedB510