Carg14150 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14150
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Peptidyl-prolyl cis-trans isomerase
Location	Cucurbita_argyrosperma_scaffold_045 : 277818 .. 280334 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCAAGAGCTCGCCACTGTCTGCACCAATCTAAGTGAAAGGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAAGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCGCATACTGATCTCATTTCTTTATTATCTTGATTTTTCTGGCCATTACGTAGAGTAATTGTTTCTTTTTGTTTGCCATTTCTGGTCGGATTTGTGTAGTTTTCAGTCCGGAATTAGATAGGATTCACTTTATCATGAATTGAACCTGGAACCCTAGACTTAACCGTGAGGGATCTTAGTGTTTGGATTGCGGTATTGCTAGTTCGAGATATTAGATTTAGGTTTTAGTTCAATGAATTTTATTTACAGGGAGGATATCTATGTATCGCTTGGATTCAATTGGAGATGTGTGTCTATTGTATTTACTTATTTGCTTCGTGTAAGATTTGGAATTCTTCTTGTTTTGGTTTGAATTGAAATAGTACAGGATACTATCGTGTATGATTATTCCCTGCCGCTCTCGGATACCAAACATAATTTGTTGAATTGTGGTCTATGATTGAGGAACTTTGTTATACCTCAATTTCTAAGTTGAATTTCACTTTATGAAAAAACTATAATGATAATGCTCAAACAATTATCACAAAGTCGTGATTACTTTTGGACTTTGCGATGAAGTTGTGTGATACCGTGATGAATATAACCATTTATGTTTGACCATTTTACTTGAAAACCGATGAAAGGATTACTTACTCAGTACTTGATTTTAGCTAAATGGTTAAATCAACCATTCAATCGGAATATCCGTTTAGAGCCTCTCATATATTGGTAAAAAGTGAGAACATCAACACTTTGAAAGTGTCGCTATCAAGAAAATTTCTACCTGCTGGTGTGGAGACTTTTTTGCTCCAGTAAATACTTTAGATTTAATAATTCCATGAGATCTAGGAACTTAGCTTTGGAAATCGAAGGGAGAGGTGGAGATGTAGCAATAGTTTTACTTGTTAGTAATATTTCACTATAATCTGGTATAATCAGACCCACACATCAAAAGAATTAAAACAACAAAATTTGAACAACCCTTTCTGGTAAAATTGGTTCTATCTAGGATTGCAGTTCTCTTTTCCCCCACTGAAATGTATACTTCGTTAGTGTAGATGGAGCCATAATTTTTCATGGGGAGAGGCGAACTCTTAGCTTCCAACTTTTCATATATATGAAATAAATTTCCAATTCTAAACATTTAGTAGAGAAAATTTGAGAGAAAAATTATAAATCGAACTTTGTATACAACTTTTTAAATCTAAAATGAACCCAGCCCTCCTCTTTCTGCTCCACCCCTGGTTGTCTCTTGCTAGAAATTTGTAGTTGTGTACTCTCCTTCCAAGCCCGATTAGTAAAATCCCAGAGAGTAATTGTGTTCGGTAGTTCAATAGCAGGTACATTTGGACATTTTCTAGGATCACAAGGATATGTTATGATATTTTGTTCGTAAGCAAGCTGATATTTTATTCTAGCAATTGTATTTGTGTGGATTAGCACAATGTAGAATGCGTCTAAATGAGCAACACACTGACGTTATTGCAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCCTCCTTATTGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTCCAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTCCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGTTATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGCGTCTTTTATTACGCCTCATTTGTCTGCTCAACCTCCTAGGATTATTGGGTAGGAAATGGGAATTTTTTCTGAAACGTTTTTCTTTTGGAAACTTTCTTTTTATTACTTTTTCATGGTTTATTAAGTTTTAGGTTTTAAAAAACGAAGTTTTATTTGGGGCCAAGCAGATTGTGAAGTTAGCGTCTTAGGGTTCTTGAGCTTTTAAAATGTACAGGAAGTTTGAAACTTTTGTG

mRNA sequence

TGCCAAGAGCTCGCCACTGTCTGCACCAATCTAAGTGAAAGGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAAGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCCTCCTTATTGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTCCAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTCCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGTTATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGCGTCTTTTATTACGCCTCATTTGTCTGCTCAACCTCCTAGGATTATTGGGTAGGAAATGGGAATTTTTTCTGAAACGTTTTTCTTTTGGAAACTTTCTTTTTATTACTTTTTCATGGTTTATTAAGTTTTAGGTTTTAAAAAACGAAGTTTTATTTGGGGCCAAGCAGATTGTGAAGTTAGCGTCTTAGGGTTCTTGAGCTTTTAAAATGTACAGGAAGTTTGAAACTTTTGTG

Coding sequence (CDS)

ATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAAGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAA

Protein sequence

MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA

Homology

[Close]

BLAST of Carg14150 vs. NCBI nr
Match: XP_022943036.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita maxima] >XP_023516756.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Carg14150 vs. NCBI nr
Match: XP_022984600.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1 peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234.2 bits (596), Expect = 2.4e-58
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
            A
Sbjct: 121 IA 122

[Close]

BLAST of Carg14150 vs. NCBI nr
Match: XP_022929403.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata])

HSP 1 Score: 231.1 bits (588), Expect = 2.0e-57
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSAA GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGKS
Sbjct: 1   MSSSAAVGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIREDIISGKS 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
            A
Sbjct: 121 IA 122

[Close]

BLAST of Carg14150 vs. NCBI nr
Match: XP_008452069.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 4.5e-57
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Carg14150 vs. NCBI nr
Match: XP_022136966.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Momordica charantia])

HSP 1 Score: 229.6 bits (584), Expect = 5.9e-57
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTV+RDDI+SGKS
Sbjct: 1   MSSSTAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVLRDDIVSGKS 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEA F LKVGE+S+IVDTDSGVHIIKR
Sbjct: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVGEISEIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Carg14150 vs. TAIR10
Match: AT2G18040.1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1)

HSP 1 Score: 193.4 bits (490), Expect = 8.4e-50
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 5   AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]

BLAST of Carg14150 vs. TAIR10
Match: AT1G26550.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07
Identity = 35/109 (32.11%), Postives = 49/109 (44.95%), Query Frame = 0


Query: 10  VRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRI 69
           V+A H+L + QG    A  K  +G +        A                +F  +A+  
Sbjct: 43  VKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPA----------------EFAKIAAEY 102

Query: 70  SDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHII 119
           S+C S K+GGDLG F RG+M  PF++  F   VG  S    +  G HII
Sbjct: 103 SECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHII 135

[Close]

BLAST of Carg14150 vs. Swiss-Prot
Match: sp|Q94G00|PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 3   SSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKF 62
           SS+A  QVRASHILIKHQGSRR ASWKDPEG+II+NTTRDSAVSQL  +RDDI+SGK+KF
Sbjct: 2   SSSAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKF 61

Query: 63  EDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
           +D+A+R SDCSSAKRGGDLGPFGR QMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 62  DDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRT 120

[Close]

BLAST of Carg14150 vs. Swiss-Prot
Match: sp|Q9SL42|PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-48
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 5   AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]

BLAST of Carg14150 vs. Swiss-Prot
Match: sp|Q9LEK8|PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-44
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 68
           +VRASHILIKHQGSRR +SWKDP+G +I  TTRD AVSQL  +R +++S  + F D+ASR
Sbjct: 5   KVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDLASR 64

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
            S CSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 65  HSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 117

[Close]

BLAST of Carg14150 vs. Swiss-Prot
Match: sp|P0C1J8|PIN1_RHIO9 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=pin1 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.2e-26
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 68
           +VRASH+LIK + SRRP+SW++         +++ A+  LT  +  I SG+     +A+ 
Sbjct: 41  RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 100

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
            SDC+SAKRGGDLG F RGQMQKPFEEATFAL+VGE+S  V TDSGVH+I RTA
Sbjct: 101 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150

[Close]

BLAST of Carg14150 vs. Swiss-Prot
Match: sp|Q9QUR7|PIN1_MOUSE (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus OX=10090 GN=Pin1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.1e-26
Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 68
           +VR SH+L+KH  SRRP+SW+  +       +++ A+  +      I SG+  FE +AS+
Sbjct: 56  KVRCSHLLVKHSQSRRPSSWRQEK----ITRSKEEALELINGYIQKIKSGEEDFESLASQ 115

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
            SDCSSAK  GDLGPF RGQMQKPFE+A+FAL+ GE+S  V TDSG+HII RT
Sbjct: 116 FSDCSSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 164

[Close]

BLAST of Carg14150 vs. TrEMBL
Match: tr|A0A1S3BSY5|A0A1S3BSY5_CUCME (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103493185 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.0e-57
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Carg14150 vs. TrEMBL
Match: tr|A0A0A0KZK7|A0A0A0KZK7_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G046790 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.3e-56
Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Carg14150 vs. TrEMBL
Match: tr|A7DX09|A7DX09_LOTJA (Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus OX=34305 GN=pin1 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.9e-52
Identity = 103/121 (85.12%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS+++G+VRASHILIKHQGSRR ASWKDPEGR+IKNTTR+SAV+QL+ +R+DI+SGK+
Sbjct: 1   MSSSSSSGEVRASHILIKHQGSRRKASWKDPEGRVIKNTTRESAVAQLSTLREDILSGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
            FEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVG++S+IVDTDSGVHIIKR
Sbjct: 61  NFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGDISEIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]

BLAST of Carg14150 vs. TrEMBL
Match: tr|A0A2K1ZMH0|A0A2K1ZMH0_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa OX=3694 GN=POPTR_007G013400v3 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-51
Identity = 103/121 (85.12%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           M+SSA+  QVRASHILIKH+GSRR ASWKDPEGR+IKNTTRDSA+S+L  IR+DI+SGK+
Sbjct: 1   MASSASGTQVRASHILIKHEGSRRKASWKDPEGRVIKNTTRDSAISELKAIREDIVSGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEE TF+LKVGE+SDIVDTDSGVHII R
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEETTFSLKVGEISDIVDTDSGVHIILR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]

BLAST of Carg14150 vs. TrEMBL
Match: tr|A0A1S3UHL2|A0A1S3UHL2_VIGRR (Peptidyl-prolyl cis-trans isomerase OS=Vigna radiata var. radiata OX=3916 GN=LOC106765422 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 102/121 (84.30%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSS   G++RASHILIKH+GSRR ASWKDPEGRIIKNTTR++AVSQL  +RDDI+SGK+
Sbjct: 1   MSSSKVGGEIRASHILIKHEGSRRKASWKDPEGRIIKNTTREAAVSQLKALRDDIVSGKA 60

Query: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
            FEDVASR SDC SAKRGGDLGPFGRGQMQKPFEEAT ALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  TFEDVASRFSDCGSAKRGGDLGPFGRGQMQKPFEEATLALKVGELSDIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

The following BLAST results are available for this feature:

BLAST of Carg14150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943036.1	1.6e-59	100.00	peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 pe...	[more]
XP_022984600.1	2.4e-58	98.36	peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1...	[more]
XP_022929403.1	2.0e-57	96.72	peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata]	[more]
XP_008452069.1	4.5e-57	94.26	PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo]	[more]
XP_022136966.1	5.9e-57	93.44	peptidyl-prolyl cis-trans isomerase Pin1 [Momordica charantia]	[more]

BLAST of Carg14150 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18040.1	8.4e-50	79.66	peptidylprolyl cis/trans isomerase, NIMA-interacting 1	[more]
AT1G26550.1	1.8e-07	32.11	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

BLAST of Carg14150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94G00\|PIN1_MALDO	1.3e-52	85.71	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2...	[more]
sp\|Q9SL42\|PIN1_ARATH	1.5e-48	79.66	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1...	[more]
sp\|Q9LEK8\|PIN1_DIGLA	1.3e-44	77.88	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12....	[more]
sp\|P0C1J8\|PIN1_RHIO9	6.2e-26	56.14	Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 /...	[more]
sp\|Q9QUR7\|PIN1_MOUSE	8.1e-26	53.10	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus OX=10090 ...	[more]

BLAST of Carg14150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BSY5\|A0A1S3BSY5_CUCME	3.0e-57	94.26	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103493185 PE=4...	[more]
tr\|A0A0A0KZK7\|A0A0A0KZK7_CUCSA	4.3e-56	91.80	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G046790 P...	[more]
tr\|A7DX09\|A7DX09_LOTJA	2.9e-52	85.12	Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus OX=34305 GN=pin1 PE=2 SV=...	[more]
tr\|A0A2K1ZMH0\|A0A2K1ZMH0_POPTR	1.9e-51	85.12	Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa OX=3694 GN=POPTR_007G...	[more]
tr\|A0A1S3UHL2\|A0A1S3UHL2_VIGRR	1.2e-50	84.30	Peptidyl-prolyl cis-trans isomerase OS=Vigna radiata var. radiata OX=3916 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR023058	PPIase_PpiC_CS
IPR000297	PPIase_PpiC

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14150-RA	Carg14150-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 4..122 e-value: 1.5E-49 score: 169.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR10657:SF4	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1	coord: 5..121
None	No IPR available	PANTHER	PTHR10657	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 5..121
None	No IPR available	SUPERFAMILY	SSF54534	FKBP-like	coord: 7..121
IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type	PFAM	PF00639	Rotamase	coord: 14..121 e-value: 4.6E-24 score: 85.1
IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type	PROSITE	PS50198	PPIC_PPIASE_2	coord: 7..122 score: 28.402
IPR023058	Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site	PROSITE	PS01096	PPIC_PPIASE_1	coord: 62..82

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14150	Cla014591	Watermelon (97103) v1	carwmB0940
Carg14150	Csa4G046790	Cucumber (Chinese Long) v2	carcuB0958
Carg14150	ClCG07G008440	Watermelon (Charleston Gray)	carwcgB0916
Carg14150	CSPI04G05560	Wild cucumber (PI 183967)	carcpiB0981
Carg14150	Cucsa.106590	Cucumber (Gy14) v1	carcgyB1059
Carg14150	CmaCh04G007520	Cucurbita maxima (Rimu)	carcmaB1288
Carg14150	CmaCh16G006120	Cucurbita maxima (Rimu)	carcmaB1286
Carg14150	CmoCh16G006680	Cucurbita moschata (Rifu)	carcmoB1258
Carg14150	CmoCh04G008010	Cucurbita moschata (Rifu)	carcmoB1259
Carg14150	Lsi07G002610	Bottle gourd (USVL1VR-Ls)	carlsiB859
Carg14150	Cp4.1LG01g06740	Cucurbita pepo (Zucchini)	carcpeB1303
Carg14150	Cp4.1LG14g01860	Cucurbita pepo (Zucchini)	carcpeB1301
Carg14150	CsGy4G005440	Cucumber (Gy14) v2	carcgybB0931
Carg14150	MELO3C016378.2	Melon (DHL92) v3.6.1	carmedB0930
Carg14150	CsaV3_4G005720	Cucumber (Chinese Long) v3	carcucB0982
Carg14150	Cla97C07G135510	Watermelon (97103) v2	carwmbB0989
Carg14150	Bhi01G001840	Wax gourd	carwgoB1087

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg14150	Carg05735	Silver-seed gourd	carcarB646

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14150	Wax gourd	carwgoB1086
Carg14150	Cucurbita pepo (Zucchini)	carcpeB1302
Carg14150	Cucurbita pepo (Zucchini)	carcpeB1304
Carg14150	Melon (DHL92) v3.5.1	carmeB0924