Csa4G046790 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G046790
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPeptidyl-prolyl cis-trans isomerase 1; contains IPR000297 (Peptidyl-prolyl cis-trans isomerase, PpiC-type)
LocationChr4 : 3673487 .. 3675976 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACTAAATAAATAATATAAATATCTTTCATTTCCAGTTCCATTGTTGAGAGCTCGCGAACTATCTGCTCCACCAATCCAAGTGAAACAAAAACCGAGGGCGGCGTCACCGATCCTCTTCACCGGCTGCCAAAATAGATTCCGATCGCAAGCGCAAGAAATCGGCTCATTCGATCTCCTCTACGGATCGAACTGCGAAGGAAAAGCGTAGTACCAGCAAGAAAAACAAGATGTCCTCTTCGGCGGCCACCGCTCAGGTTAGAGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCCTGGAAAGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGAGAGCGCCGTCTCTCAGCTTACTGTCATTCGAAACGACATCATTTCCGGCAAGGCTAAGTTTGAGGATATTGCTACTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTTAGCTCATTAACCTCTTCTTTTTTTTTTTTTGCTCTTTTTTTTTTCTGATCGTTGCGTACTCGTTACTTTTTATTCTCCATTTCTTGTCTGATTGGTGTAATTTTCAGTCCGGAATTAGGTTGCTTTCACTTTATCATGCATTGAGCCTTGAGCCCTGGACTTAACTGTGAGAAATATTAGGCTCACGTTTGATGAAGTACGATTTTTCTACTTTGGGTTGCTCGCAATTGCTTTTGTTCTTCTCATGGAAACAAACGTTTGAATTCGTAGCCAAATTCCAAAAACAAAAATGAAAACCCGCTTTATTTGGCTTGGATTTTGAGATCGTTTATAAAAAGTAAAATTGAACACAAAAAAAACTTTTTGGGGAAGTTGTGTTTAAGTTTAATTTTCAAAACCCAATAATTTAAAGCACAAATGATTATCGAAGGGCCGTAGTTTTAGGGTTTTGGTTTGTTGAAGATTTAAGATTCAGGGGTTGAACTTTATTGGGGATATGTGTCTATATTTATGTATTTGCTTCATTCAAGTGTGGGATTCATCTCGTTTTGGTTGGACAGAATACCCTTGAGTATGATTATATCCTGCCACTCTCTTATTTGCTTTGTTTGTGTTGAATTGTTATTTCTATGAGTGAGGAACCGTATTATATCTCAGTTTCTAAGTTGAATTTTTTACTTACTTTATGAAAAACCAACTATCATCCTGCATTGACGCTCGAAGAATTACCACATGATTGTGATAGATCTGGTTATCTTCTTACTTTTAGAACCTGGAAGTAGGTTGATACACTGTGATGAATATTGTGTGGACCATTTTACTTGAAAACCAATGAAAGGATGACTTAATCAGTGGTTGATTTTAGTTAAATGGGTTTTGTTTACGTGCTGTCAGTTGGTTAAACTAACGTTCAATAGGAGAATCTATCTTCAGCTTTTCTCATATATTTAGCAACAAGCAAGAACATCAGCACTTTGAAATTCTCTATTTGGAATTCTATGAGATCTATGAACTTAAATGAAAGCTTTGAAAAAAGCTTACTCTCATACGACTTCATTTTCAAAACACGCCAAAAATGCAATTCCTTTTTGTTAAAATTGGATTTTCTTCTTCTTCTTATACTTTACCTTACAAGTAAGAGAGAATTAAAGAGAAAAATTTAGAGTCTTGTTAATATGTTTTGCCTCCGCTCAGTTTTTCTCTCCACCCTTGCTTGTCTGCTAGAAATTTGTAGTTATGTACTCAGCCCTACAAGCCCAGTTGATAAACTCCCGAAGTGTAATTATGTTTGGCGTTCAATAGCAGGTCTTTCGACAATTTCTTGGATCAGAAGGATATGTCGTGATGTGTTATTCATTAATAGCTGATACTTTATCCTAGCAATTGTGTTTGTATGGGTTAGGTTAACATACACAATATAGAACGTATCTAAATGACCAACACAAAAATGTTATTACAGGTCCTTTCGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATATGCCCTCAAGGTTGGAGAGATAAGCGACATTATTGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAAACTTCTCTCATGAATCTCATGGCTTTACTTATGAAGCATTTAACCTATTGGGCCTTTGGCCAAATCAAAGTTGTTCAAGTAAGATTTGTTTCTTCTGCTTCACGCCACACGAATTTCGTACTATAATACTCTTGATAATTCATGTTGTGATTTGGTTATAGCTACTTTGTTTCAGTGACTCTGAAGTTCGATGCTTTTTTATGCCATTGAATTTTTGCCTTTGTAAACGCAACAACATTAACATTAAAGCTGGTTGTGGATTTTAAATTTATCGTGCCTATAACTACTCTATATTTGTTTTTTTAGTTTGACGCGGGATGAAAATACGATGTTCTCAAAACATCTGATCTCGTAGTCAAAAGTTTAAAGTTGCATTGTATTCGTTTGGCTTGTTGTTCTGGAAAGTGGAAAGGATAGGAAATGAACTTTTT

mRNA sequence

ATGTCCTCTTCGGCGGCCACCGCTCAGGTTAGAGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCCTGGAAAGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGAGAGCGCCGTCTCTCAGCTTACTGTCATTCGAAACGACATCATTTCCGGCAAGGCTAAGTTTGAGGATATTGCTACTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTCGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATATGCCCTCAAGGTTGGAGAGATAAGCGACATTATTGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAA

Coding sequence (CDS)

ATGTCCTCTTCGGCGGCCACCGCTCAGGTTAGAGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCCTGGAAAGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGAGAGCGCCGTCTCTCAGCTTACTGTCATTCGAAACGACATCATTTCCGGCAAGGCTAAGTTTGAGGATATTGCTACTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTCGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATATGCCCTCAAGGTTGGAGAGATAAGCGACATTATTGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAA

Protein sequence

MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA*
Homology
[Close]
BLAST of Csa4G046790 vs. Swiss-Prot
Match: PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.5e-52
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 1 

Query: 3   SSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKF 62
           SS+A  QVRASHILIKHQGSRR ASWKDPEG+II+NTTR+SAVSQL  +R+DI+SGKAKF
Sbjct: 2   SSSAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKF 61

Query: 63  EDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRT 122
           +D+A R SDCSSAKRGGDLGPFGR QMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKRT
Sbjct: 62  DDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRT 120

[Close]
BLAST of Csa4G046790 vs. Swiss-Prot
Match: PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.7e-50
Identity = 97/118 (82.20%), Postives = 105/118 (88.98%), Query Frame = 1 

Query: 5   AATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTRE+AV QL  IR DI+SGKA FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  IATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 123
           +ATR+SDCSSAKRGGDLG FGRGQMQKPFEEATYALKVG+ISDI+DTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of Csa4G046790 vs. Swiss-Prot
Match: PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-44
Identity = 86/116 (74.14%), Postives = 99/116 (85.34%), Query Frame = 1 

Query: 6   ATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDI 65
           ++ +VRASHILIKHQGSRR +SWKDP+G +I  TTR+ AVSQL  +R +++S  A F D+
Sbjct: 2   SSEKVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDL 61

Query: 66  ATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRT 122
           A+R S CSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGEISDI+DTDSGVHIIKRT
Sbjct: 62  ASRHSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 117

[Close]
BLAST of Csa4G046790 vs. Swiss-Prot
Match: PIN1_RHIO9 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=pin1 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.6e-27
Identity = 64/114 (56.14%), Postives = 81/114 (71.05%), Query Frame = 1 

Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDIATR 68
           +VRASH+LIK + SRRP+SW++         ++E A+  LT  ++ I SG+     +AT 
Sbjct: 41  RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 100

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 123
            SDC+SAKRGGDLG F RGQMQKPFEEAT+AL+VGE+S  + TDSGVH+I RTA
Sbjct: 101 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150

[Close]
BLAST of Csa4G046790 vs. Swiss-Prot
Match: DOD_DROME (Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster GN=dod PE=2 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 5.6e-27
Identity = 62/117 (52.99%), Postives = 80/117 (68.38%), Query Frame = 1 

Query: 6   ATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDI 65
           A  +V   H+L+KH+GSRRP+SW+  E  I +  T+E A   L V RN I+  +A F+++
Sbjct: 54  APDEVHCLHLLVKHKGSRRPSSWR--EANITR--TKEEAQLLLEVYRNKIVQQEATFDEL 113

Query: 66  ATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 123
           A   SDCSSAKRGGDLG FGRGQMQ  FE+A + L V ++S I+D+DSG+HII R A
Sbjct: 114 ARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLSGIVDSDSGLHIILRKA 166

[Close]
BLAST of Csa4G046790 vs. TrEMBL
Match: A0A0A0KZK7_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.2e-61
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of Csa4G046790 vs. TrEMBL
Match: A7DX09_LOTJA (Peptidylprolyl isomerase OS=Lotus japonicus GN=pin1 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.7e-52
Identity = 101/121 (83.47%), Postives = 116/121 (95.87%), Query Frame = 1 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSS+++ +VRASHILIKHQGSRR ASWKDPEGR+IKNTTRESAV+QL+ +R DI+SGKA
Sbjct: 1   MSSSSSSGEVRASHILIKHQGSRRKASWKDPEGRVIKNTTRESAVAQLSTLREDILSGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
            FED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVG+IS+I+DTDSGVHIIKR
Sbjct: 61  NFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGDISEIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Csa4G046790 vs. TrEMBL
Match: A0A059AHH1_EUCGR (Peptidylprolyl isomerase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J02408 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 8.6e-51
Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 1 

Query: 1   MSSSAATA-----QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDI 60
           MSSSAA A     QVRASHILIKH+GSRR ASWKDPEGR+I++TTRESAVSQL  +R DI
Sbjct: 63  MSSSAAGAAAAGSQVRASHILIKHEGSRRKASWKDPEGRVIRSTTRESAVSQLKALREDI 122

Query: 61  ISGKAKFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGV 120
           ++GKAKFED+A+R SDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDI+DTDSGV
Sbjct: 123 VAGKAKFEDLASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIVDTDSGV 182

Query: 121 HIIKRT 122
           HII RT
Sbjct: 183 HIIMRT 188

[Close]
BLAST of Csa4G046790 vs. TrEMBL
Match: A0A061DFC2_THECC (Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-50
Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 1 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSS A  QVRA+HILIKHQGSRR ASWKDPEGR+I NTTR++AVSQL  +R+DI+SGKA
Sbjct: 62  MSSSTAANQVRAAHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIVSGKA 121

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KF+++A+R SDCSSAKRGGDLGPFGRGQMQKPFE ATYALKVGEISDI+DTDSGVHII R
Sbjct: 122 KFDEVASRYSDCSSAKRGGDLGPFGRGQMQKPFENATYALKVGEISDIVDTDSGVHIIMR 181

Query: 121 T 122
           T
Sbjct: 182 T 182

[Close]
BLAST of Csa4G046790 vs. TrEMBL
Match: A0A0L9TNV5_PHAAN (Peptidylprolyl isomerase OS=Phaseolus angularis GN=LR48_Vigan01g179100 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.5e-50
Identity = 99/121 (81.82%), Postives = 110/121 (90.91%), Query Frame = 1 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSS    ++RASHILIKH+GSRR ASWKDPEGRIIKNTTRE+AVSQL  +R+DI+SGKA
Sbjct: 1   MSSSKVGGEIRASHILIKHEGSRRKASWKDPEGRIIKNTTREAAVSQLKALRDDIVSGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
            FED+A+R SDC SAKRGGDLGPFGRGQMQKPFEEAT ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  TFEDVASRFSDCGSAKRGGDLGPFGRGQMQKPFEEATLALKVGELSDIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Csa4G046790 vs. TAIR10
Match: AT2G18040.1 (AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1)

HSP 1 Score: 199.1 bits (505), Expect = 1.5e-51
Identity = 97/118 (82.20%), Postives = 105/118 (88.98%), Query Frame = 1 

Query: 5   AATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTRE+AV QL  IR DI+SGKA FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  IATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 123
           +ATR+SDCSSAKRGGDLG FGRGQMQKPFEEATYALKVG+ISDI+DTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of Csa4G046790 vs. TAIR10
Match: AT1G26550.1 (AT1G26550.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 36/109 (33.03%), Postives = 48/109 (44.04%), Query Frame = 1 

Query: 10  VRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDIATRI 69
           V+A H+L + QG    A  K  +G +                 N      A+F  IA   
Sbjct: 43  VKARHVLCEKQGKINEAYKKLQDGWL----------------SNGDKVPPAEFAKIAAEY 102

Query: 70  SDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHII 119
           S+C S K+GGDLG F RG+M  PF++  +   VG  S    +  G HII
Sbjct: 103 SECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHII 135

[Close]
BLAST of Csa4G046790 vs. NCBI nr
Match: gi|449457542|ref|XP_004146507.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of Csa4G046790 vs. NCBI nr
Match: gi|659102324|ref|XP_008452069.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 2.1e-58
Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 1 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSA T QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIR+DIISGKA
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGEISDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of Csa4G046790 vs. NCBI nr
Match: gi|152955221|emb|CAM59671.1| (parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus])

HSP 1 Score: 212.6 bits (540), Expect = 3.8e-52
Identity = 101/121 (83.47%), Postives = 116/121 (95.87%), Query Frame = 1 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSS+++ +VRASHILIKHQGSRR ASWKDPEGR+IKNTTRESAV+QL+ +R DI+SGKA
Sbjct: 1   MSSSSSSGEVRASHILIKHQGSRRKASWKDPEGRVIKNTTRESAVAQLSTLREDILSGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
            FED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVG+IS+I+DTDSGVHIIKR
Sbjct: 61  NFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGDISEIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Csa4G046790 vs. NCBI nr
Match: gi|743839408|ref|XP_011025935.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Populus euphratica])

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-51
Identity = 101/121 (83.47%), Postives = 113/121 (93.39%), Query Frame = 1 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           M+SSA+  QVRASHILIKH+GSRR ASWKDPEGR+IKNTTR+SA+SQL  IR DI+SGKA
Sbjct: 1   MASSASGTQVRASHILIKHEGSRRKASWKDPEGRVIKNTTRDSAISQLKAIREDIVSGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEE T++LKVGEISDI+DTDSGVHII R
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEETTFSLKVGEISDIVDTDSGVHIILR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of Csa4G046790 vs. NCBI nr
Match: gi|629086759|gb|KCW53116.1| (hypothetical protein EUGRSUZ_J02408, partial [Eucalyptus grandis])

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-50
Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 1 

Query: 1   MSSSAATA-----QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDI 60
           MSSSAA A     QVRASHILIKH+GSRR ASWKDPEGR+I++TTRESAVSQL  +R DI
Sbjct: 63  MSSSAAGAAAAGSQVRASHILIKHEGSRRKASWKDPEGRVIRSTTRESAVSQLKALREDI 122

Query: 61  ISGKAKFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGV 120
           ++GKAKFED+A+R SDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDI+DTDSGV
Sbjct: 123 VAGKAKFEDLASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIVDTDSGV 182

Query: 121 HIIKRT 122
           HII RT
Sbjct: 183 HIIMRT 188

The following BLAST results are available for this feature:
BLAST of Csa4G046790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PIN1_MALDO8.5e-5283.19Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1[more]
PIN1_ARATH2.7e-5082.20Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV... [more]
PIN1_DIGLA2.3e-4474.14Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV... [more]
PIN1_RHIO95.6e-2756.14Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 /... [more]
DOD_DROME5.6e-2752.99Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster GN=... [more]
BLAST of Csa4G046790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZK7_CUCSA9.2e-61100.00Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1[more]
A7DX09_LOTJA2.7e-5283.47Peptidylprolyl isomerase OS=Lotus japonicus GN=pin1 PE=2 SV=1[more]
A0A059AHH1_EUCGR8.6e-5182.54Peptidylprolyl isomerase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J02408 PE=4... [more]
A0A061DFC2_THECC1.9e-5081.82Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1[more]
A0A0L9TNV5_PHAAN2.5e-5081.82Peptidylprolyl isomerase OS=Phaseolus angularis GN=LR48_Vigan01g179100 PE=4 SV=1[more]
BLAST of Csa4G046790 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18040.11.5e-5182.20 peptidylprolyl cis/trans isomerase, NIMA-interacting 1[more]
AT1G26550.11.4e-0733.03 FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
BLAST of Csa4G046790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457542|ref|XP_004146507.1|1.3e-60100.00PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus][more]
gi|659102324|ref|XP_008452069.1|2.1e-5895.90PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo][more]
gi|152955221|emb|CAM59671.1|3.8e-5283.47parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus][more]
gi|743839408|ref|XP_011025935.1|1.5e-5183.47PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Populus euphratica][more]
gi|629086759|gb|KCW53116.1|1.2e-5082.54hypothetical protein EUGRSUZ_J02408, partial [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006094 gluconeogenesis
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006833 water transport
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0009651 response to salt stress
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005575 cellular_component
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0016853 isomerase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU101947cucumber EST collection version 3.0transcribed_cluster
CU102475cucumber EST collection version 3.0transcribed_cluster
CU130676cucumber EST collection version 3.0transcribed_cluster
CU155664cucumber EST collection version 3.0transcribed_cluster
CU162604cucumber EST collection version 3.0transcribed_cluster
CU164579cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G046790.1Csa4G046790.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU102475CU102475transcribed_cluster
CU130676CU130676transcribed_cluster
CU155664CU155664transcribed_cluster
CU164579CU164579transcribed_cluster
CU101947CU101947transcribed_cluster
CU162604CU162604transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 14..121
score: 7.6
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROFILEPS50198PPIC_PPIASE_2coord: 7..122
score: 2
NoneNo IPR availableGENE3DG3DSA:3.10.50.40coord: 9..121
score: 2.2
NoneNo IPR availablePANTHERPTHR10657PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 2..121
score: 8.7
NoneNo IPR availablePANTHERPTHR10657:SF4PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1coord: 2..121
score: 8.7
NoneNo IPR availableunknownSSF54534FKBP-likecoord: 7..121
score: 2.81

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G046790Cla014591Watermelon (97103) v1cuwmB310
Csa4G046790MELO3C016377Melon (DHL92) v3.5.1cumeB312
Csa4G046790ClCG07G008440Watermelon (Charleston Gray)cuwcgB325
Csa4G046790Lsi07G002610Bottle gourd (USVL1VR-Ls)culsiB303
Csa4G046790MELO3C016378.2Melon (DHL92) v3.6.1cumedB297
Csa4G046790Cla97C07G135510Watermelon (97103) v2cuwmbB322
Csa4G046790Bhi01G001840Wax gourdcuwgoB367
Csa4G046790CSPI04G05560Wild cucumber (PI 183967)cpicuB182
Csa4G046790Cucsa.106590Cucumber (Gy14) v1cgycuB129
Csa4G046790CmaCh04G007520Cucurbita maxima (Rimu)cmacuB713
Csa4G046790CmaCh16G006120Cucurbita maxima (Rimu)cmacuB337
Csa4G046790CmoCh16G006680Cucurbita moschata (Rifu)cmocuB325
Csa4G046790CmoCh04G008010Cucurbita moschata (Rifu)cmocuB705
Csa4G046790Cp4.1LG01g06740Cucurbita pepo (Zucchini)cpecuB400
Csa4G046790Cp4.1LG14g01860Cucurbita pepo (Zucchini)cpecuB221
Csa4G046790CsGy4G005440Cucumber (Gy14) v2cgybcuB165
Csa4G046790Carg14150Silver-seed gourdcarcuB0958
Csa4G046790Carg05735Silver-seed gourdcarcuB1033
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G046790Silver-seed gourdcarcuB0439
Csa4G046790Watermelon (97103) v2cuwmbB268
Csa4G046790Wax gourdcuwgoB376
Csa4G046790Cucumber (Chinese Long) v2cucuB146
Csa4G046790Cucurbita maxima (Rimu)cmacuB667
Csa4G046790Cucurbita moschata (Rifu)cmocuB655
Csa4G046790Melon (DHL92) v3.5.1cumeB335
Csa4G046790Watermelon (Charleston Gray)cuwcgB288
Csa4G046790Watermelon (97103) v1cuwmB331
Csa4G046790Cucurbita pepo (Zucchini)cpecuB083
Csa4G046790Bottle gourd (USVL1VR-Ls)culsiB253
Csa4G046790Cucumber (Gy14) v2cgybcuB272
Csa4G046790Melon (DHL92) v3.6.1cumedB324