ClCG07G008440 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCCACCATTGTTAAGAGCTCGCAACTATCTCCACCAATCCAAGTGAAGGAAAAAGCGAGGGCGGCGCCACCGTTACCCATCACCGGCTGCCAAAATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTATTCGATCTCCTCTGCGGATCGATCTGCAAAGGAAAAGCGTAGCAGCAGCAAGAAAAATAAGATGTCCTCTTCGGCGGCTACCGGTCAGGTTAGGGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCGTGGAAGGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGATAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACATTGCCTCTCGCATCTCTGACTGTAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCGCCCACTAACCTCCTTTCTTTTGGCTCTTTTCTTAATTTTCTGATTCAGTTACGTACTTATTTCTTTTTATTCGCCACTTCTTGTCTGATTGGTGTAATTTGCAGTCCGGAATTAGGTATTTTCCAATTTATCATGCATTGAGCCTTGAACCCTAGACTTAACTGTGAGAAATCTTAGGCCCCGTTTGATGAAGTTTTTAGTTTCCTGTTTTGTTTTGCTCACAATTTCTTTACCATTACCATGGTTTTTGTCTTCCTCATAAAAACATTTGAATTCGTAGCTAAATTCCAAATAATATAATAATAATAAAAACATACTTCATTTGGCTTTGAGAACATTTGTAAAAAGTAAAATTGAGCACAAAAAAACCTTTTGTGGAAGTTCTGTTTAAGTTTAATTTTCAGAAACCAATAACTAAAGCCCAAATGATTATCGAAGGGCCGCAGTCATTGGATTTCGGTTTGTTGAAGATTTAAGATTTAGGTTTCAAGTGGTTGAATATTATTTGTAAACAGTATATCTGAATCTCGGTTGGATTTTATTGGAGATATGCGTCTATATTTTACGTATTTGCTTGATTTAAGATTTGGAATTCATGTCGTTTGGGTTTGACAGGATAACCTTGAGCATGTATGATTTTATCCTGCCACTCTCGTATTTGCTTCGTTTTTGTTGGATTGCTATGTCTACAAATGAGGAACTGTGTTATATCTCAGTTTCTTAGTTGAATTTTTTACTTACTTTCTGAAAATCCTATTATGATCCTGCATTGATGCCCAAAGACTTATCACAAGATTGTGAAAGATTTGGTTGTCTTCTTACTTTTGGAGCCTGGAAGTTGGTTGATACTATGACGAATATTGTGTGGACCATTTTACTTGAAAACCTATGAAAGGATTACTTAATCAGTGCTTGATTTTAGCTAAATAAGTTTTCTTTATGTGATGTCAATTGTTTAAACCAACCATTCAATCGGAAAATCCATCTGCAGATTTTCTCGTATATTTGGTAAAAAGCAAGAACGTCAACACTTTGAAACTCTCTATATTTGGAAATTTTTTCCCTGCTGCTGTGAATTAATTTTTCGCCCAGCAAATGCTTAAGATTCTAGATTGCTATGAGATCTATGAACTTAAATGAAAGCTTTGGAAATCAAAGGGAGAGGTGGGGAAGTAGCAGTAATTATACTTGTTACTAGTTGCATTACAAATTCATACGCCCCCCCATCTCACGCACACACACAAAAACAAGAACTTCCCCTTTTGTTGAATTTGGTTCCATGTAGTCTTGCAGTCCTTTTTCTTCTTGTACTTAAGATTTCAATTAAGAGGAAAATTTTAGAATCTTAACTTGTAAGTATATTTTTGCCTCCCCTTCCTTTTCGGGTCCACCCATGGTTGTGTTTGCTAGAAATTTGTAGTTATGTACTCAGTCTTGCGAGTCCAGTTGATAAAATCCAAAAGAGTGATTATGTTTGGCACTTCAATAGCAGGTTTCTCGACAATCTCTAGGATCAGAAGGATATGTAGTGATGTTCTATTCGTTAGTAGTTGATATTTTATTTGTATGGATTAGCATAATATAGAATGCGTGTAAACGAGCAACACAATTAATGTTATTGCAGGTCCTTTTGGGCGTGGCCAGATGCAAAAGCCTTTTGAAGAAGCAACATTTGCTCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAACTTCTCTCATAAAGCTTGTGGCTCTACTTATGAAGCACTTAATCCATTTAGGCTTGGCTCAAATTGAAGTTGTTTAAGTAGGATTTGTTTCTGCTCCAAGGCCACACGAATTTTCTTACTATAATACTCTCTTCATAATTCATGTTGTGCTTTGGCTATACCTACTCTGTTTCAGTGACACTAAGATTTTTCTGAAGTTCGATGCCTTTATGCCATTGAATTTTTGCCTTTGTAAAAGTGACAATATTAACATTCAACTGGTTGTGGTTTGAATTATTTGTCTACTCTCTCTAT TGCCCACCATTGTTAAGAGCTCGCAACTATCTCCACCAATCCAAGTGAAGGAAAAAGCGAGGGCGGCGCCACCGTTACCCATCACCGGCTGCCAAAATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTATTCGATCTCCTCTGCGGATCGATCTGCAAAGGAAAAGCGTAGCAGCAGCAAGAAAAATAAGATGTCCTCTTCGGCGGCTACCGGTCAGGTTAGGGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCGTGGAAGGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGATAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACATTGCCTCTCGCATCTCTGACTGTAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAAAAGCCTTTTGAAGAAGCAACATTTGCTCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAACTTCTCTCATAAAGCTTGTGGCTCTACTTATGAAGCACTTAATCCATTTAGGCTTGGCTCAAATTGAAGTTGTTTAAGTAGGATTTGTTTCTGCTCCAAGGCCACACGAATTTTCTTACTATAATACTCTCTTCATAATTCATGTTGTGCTTTGGCTATACCTACTCTGTTTCAGTGACACTAAGATTTTTCTGAAGTTCGATGCCTTTATGCCATTGAATTTTTGCCTTTGTAAAAGTGACAATATTAACATTCAACTGGTTGTGGTTTGAATTATTTGTCTACTCTCTCTAT ATGTCCTCTTCGGCGGCTACCGGTCAGGTTAGGGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCGTGGAAGGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGATAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACATTGCCTCTCGCATCTCTGACTGTAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAAAAGCCTTTTGAAGAAGCAACATTTGCTCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAA MSSSAATGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA
BLAST of ClCG07G008440 vs. Swiss-Prot
Match: PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 2.6e-53 Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 1
BLAST of ClCG07G008440 vs. Swiss-Prot
Match: PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 5.1e-49 Identity = 93/118 (78.81%), Postives = 106/118 (89.83%), Query Frame = 1
BLAST of ClCG07G008440 vs. Swiss-Prot
Match: PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.5e-45 Identity = 88/113 (77.88%), Postives = 97/113 (85.84%), Query Frame = 1
BLAST of ClCG07G008440 vs. Swiss-Prot
Match: PIN1_RHIO9 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=pin1 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26 Identity = 64/114 (56.14%), Postives = 80/114 (70.18%), Query Frame = 1
BLAST of ClCG07G008440 vs. Swiss-Prot
Match: PIN1_MOUSE (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus GN=Pin1 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-26 Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 1
BLAST of ClCG07G008440 vs. TrEMBL
Match: A0A0A0KZK7_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 7.2e-58 Identity = 114/122 (93.44%), Postives = 121/122 (99.18%), Query Frame = 1
BLAST of ClCG07G008440 vs. TrEMBL
Match: A7DX09_LOTJA (Peptidylprolyl isomerase OS=Lotus japonicus GN=pin1 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 3.1e-53 Identity = 102/121 (84.30%), Postives = 118/121 (97.52%), Query Frame = 1
BLAST of ClCG07G008440 vs. TrEMBL
Match: A0A0L9TNV5_PHAAN (Peptidylprolyl isomerase OS=Phaseolus angularis GN=LR48_Vigan01g179100 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 2.2e-51 Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 1
BLAST of ClCG07G008440 vs. TrEMBL
Match: A0A0S3R4J9_PHAAN (Peptidylprolyl isomerase OS=Vigna angularis var. angularis GN=Vigan.01G326000 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 2.2e-51 Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 1
BLAST of ClCG07G008440 vs. TrEMBL
Match: A0A061DFC2_THECC (Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 2.9e-51 Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 1
BLAST of ClCG07G008440 vs. TAIR10
Match: AT2G18040.1 (AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1) HSP 1 Score: 194.9 bits (494), Expect = 2.9e-50 Identity = 93/118 (78.81%), Postives = 106/118 (89.83%), Query Frame = 1
BLAST of ClCG07G008440 vs. TAIR10
Match: AT1G26550.1 (AT1G26550.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 53.9 bits (128), Expect = 8.0e-08 Identity = 36/109 (33.03%), Postives = 47/109 (43.12%), Query Frame = 1
BLAST of ClCG07G008440 vs. NCBI nr
Match: gi|659102324|ref|XP_008452069.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo]) HSP 1 Score: 235.0 bits (598), Expect = 7.2e-59 Identity = 117/122 (95.90%), Postives = 121/122 (99.18%), Query Frame = 1
BLAST of ClCG07G008440 vs. NCBI nr
Match: gi|449457542|ref|XP_004146507.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus]) HSP 1 Score: 231.1 bits (588), Expect = 1.0e-57 Identity = 114/122 (93.44%), Postives = 121/122 (99.18%), Query Frame = 1
BLAST of ClCG07G008440 vs. NCBI nr
Match: gi|152955221|emb|CAM59671.1| (parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus]) HSP 1 Score: 215.7 bits (548), Expect = 4.5e-53 Identity = 102/121 (84.30%), Postives = 118/121 (97.52%), Query Frame = 1
BLAST of ClCG07G008440 vs. NCBI nr
Match: gi|743839408|ref|XP_011025935.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Populus euphratica]) HSP 1 Score: 213.4 bits (542), Expect = 2.2e-52 Identity = 103/121 (85.12%), Postives = 114/121 (94.21%), Query Frame = 1
BLAST of ClCG07G008440 vs. NCBI nr
Match: gi|950995818|ref|XP_014505523.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Vigna radiata var. radiata]) HSP 1 Score: 209.5 bits (532), Expect = 3.2e-51 Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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