CsaV3_4G005720 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G005720
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPeptidyl-prolyl cis-trans isomerase
Locationchr4 : 3765544 .. 3768232 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAATGAATGTACAAATTTGCAAACTTTATTTTCCCAAAAGTCTCTCCACCCGTTAAGATACTGAAACGGACGGTGGAGATGGAATGATTAGAAGTACTCCACTTTTGGGGAAATATCTACTAAATAAATAATATAAATATCTTTCATTTCCAGTTCCATTGTTGAGAGCTCGCGAACTATCTGCTCCACCAATCCAAGTGAAACAAAAACCGAGGGCGGCGTCACCGATCCTCTTCACCGGCTGCCAAAATAGATTCCGATCGCAAGCGCAAGAAATCGGCTCATTCGATCTCCTCTACGGATCGAACTGCGAAGGAAAAGCGTAGTACCAGCAAGAAAAACAAGATGTCCTCTTCGGCGGCCACCGCTCAGGTTAGAGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCCTGGAAAGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGAGAGCGCCGTCTCTCAGCTTACTGTCATTCGAAACGACATCATTTCCGGCAAGGCTAAGTTTGAGGATATTGCTACTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTTAGCTCATTAACCTCTTCTTTTTTTTTTTTTGCTCTTTTTTTTTTCTGATCGTTGCGTACTCGTTACTTTTTATTCTCCATTTCTTGTCTGATTGGTGTAATTTTCAGTCCGGAATTAGGTTGCTTTCACTTTATCATGCATTGAGCCTTGAGCCCTGGACTTAACTGTGAGAAATATTAGGCTCACGTTTGATGAAGTACGATTTTTCTACTTTGGGTTGCTCGCAATTGCTTTTGTTCTTCTCATGGAAACAAACGTTTGAATTCGTAGCCAAATTCCAAAAACAAAAATGAAAACCCGCTTTATTTGGCTTGGATTTTGAGATCGTTTATAAAAAGTAAAATTGAACACAAAAAAAACTTTTTGGGGAAGTTGTGTTTAAGTTTAATTTTCAAAACCCAATAATTTAAAGCACAAATGATTATCGAAGGGCCGTAGTTTTAGGGTTTTGGTTTGTTGAAGATTTAAGATTCAGGGGTTGAACTTTATTGGGGATATGTGTCTATATTTATGTATTTGCTTCATTCAAGTGTGGGATTCATCTCGTTTTGGTTGGACAGAATACCCTTGAGTATGATTATATCCTGCCACTCTCTTATTTGCTTTGTTTGTGTTGAATTGTTATTTCTATGAGTGAGGAACCGTATTATATCTCAGTTTCTAAGTTGAATTTTTTACTTACTTTATGAAAAACCAACTATCATCCTGCATTGACGCTCGAAGAATTACCACATGATTGTGATAGATCTGGTTATCTTCTTACTTTTAGAACCTGGAAGTAGGTTGATACACTGTGATGAATATTGTGTGGACCATTTTACTTGAAAACCAATGAAAGGATGACTTAATCAGTGGTTGATTTTAGTTAAATGGGTTTTGTTTACGTGCTGTCAGTTGGTTAAACTAACGTTCAATAGGAGAATCTATCTTCAGCTTTTCTCATATATTTAGCAACAAGCAAGAACATCAGCACTTTGAAATTCTCTATTTGGAATTCTATGAGATCTATGAACTTAAATGAAAGCTTTGAAAAAAGCTTACTCTCATACGACTTCATTTTCAAAACACGCCAAAAATGCAATTCCTTTTTGTTAAAATTGGATTTTCTTCTTCTTCTTATACTTTACCTTACAAGTAAGAGAGAATTAAAGAGAAAAATTTAGAGTCTTGTTAATATGTTTTGCCTCCGCTCAGTTTTTCTCTCCACCCTTGCTTGTCTGCTAGAAATTTGTAGTTATGTACTCAGCCCTACAAGCCCAGTTGATAAACTCCCGAAGTGTAATTATGTTTGGCGTTCAATAGCAGGTCTTTCGACAATTTCTTGGATCAGAAGGATATGTCGTGATGTGTTATTCATTAATAGCTGATACTTTATCCTAGCAATTGTGTTTGTATGGGTTAGGTTAACATACACAATATAGAACGTATCTAAATGACCAACACAAAAATGTTATTACAGGTCCTTTCGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATATGCCCTCAAGGTTGGAGAGATAAGCGACATTATTGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAAACTTCTCTCATGAATCTCATGGCTTTACTTATGAAGCATTTAACCTATTGGGCCTTTGGCCAAATCAAAGTTGTTCAAGTAAGATTTGTTTCTTCTGCTTCACGCCACACGAATTTCGTACTATAATACTCTTGATAATTCATGTTGTGATTTGGTTATAGCTACTTTGTTTCAGTGACTCTGAAGTTCGATGCTTTTTTATGCCATTGAATTTTTGCCTTTGTAAACGCAACAACATTAACATTAAAGCTGGTTGTGGATTTTAAATTTATCGTGCCTATAACTACTCTATATTTGTTTTTTTAGTTTGACGCGGGATGAAAATACGATGTTCTCAAAACATCTGATCTCGTAGTCAAAAGTTTAAAGTTGCATTGTATTCGTTTGGCTTGTTGTTCTGGAAAGTGGAAAGGATAGGAAATGAACTTTTTGGTAACATTTTTTTTCTTCTCTTCCTGAAAAATGAAAAATAGAAATTTACCTGAATTCTTTTGGTAACGGTTTATAAAT

mRNA sequence

ATGTCCTCTTCGGCGGCCACCGCTCAGGTTAGAGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCCTGGAAAGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGAGAGCGCCGTCTCTCAGCTTACTGTCATTCGAAACGACATCATTTCCGGCAAGGCTAAGTTTGAGGATATTGCTACTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTCGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATATGCCCTCAAGGTTGGAGAGATAAGCGACATTATTGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAA

Coding sequence (CDS)

ATGTCCTCTTCGGCGGCCACCGCTCAGGTTAGAGCATCGCATATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCCTGGAAAGATCCGGAAGGCAGAATTATCAAGAATACCACTCGTGAGAGCGCCGTCTCTCAGCTTACTGTCATTCGAAACGACATCATTTCCGGCAAGGCTAAGTTTGAGGATATTGCTACTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTCGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATATGCCCTCAAGGTTGGAGAGATAAGCGACATTATTGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAA

Protein sequence

MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA
Homology
[Close]
BLAST of CsaV3_4G005720 vs. NCBI nr
Match: XP_004146507.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus] >KGN53316.1 hypothetical protein Csa_4G046790 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 4.4e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CsaV3_4G005720 vs. NCBI nr
Match: XP_008452069.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo])

HSP 1 Score: 232.6 bits (592), Expect = 7.0e-58
Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSA T QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIR+DIISGKA
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGEISDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CsaV3_4G005720 vs. NCBI nr
Match: XP_022943036.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita maxima] >XP_023516756.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 1.7e-56
Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CsaV3_4G005720 vs. NCBI nr
Match: XP_022984600.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1 peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-56
Identity = 112/122 (91.80%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
            A
Sbjct: 121 IA 122

[Close]
BLAST of CsaV3_4G005720 vs. NCBI nr
Match: XP_022929403.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata])

HSP 1 Score: 226.5 bits (576), Expect = 5.0e-56
Identity = 112/122 (91.80%), Postives = 118/122 (96.72%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIR DIISGK+
Sbjct: 1   MSSSAAVGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIREDIISGKS 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
            A
Sbjct: 121 IA 122

[Close]
BLAST of CsaV3_4G005720 vs. TAIR10
Match: AT2G18040.1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1)

HSP 1 Score: 199.1 bits (505), Expect = 1.5e-51
Identity = 97/118 (82.20%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 5   AATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTRE+AV QL  IR DI+SGKA FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  IATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 123
           +ATR+SDCSSAKRGGDLG FGRGQMQKPFEEATYALKVG+ISDI+DTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of CsaV3_4G005720 vs. TAIR10
Match: AT1G26550.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 36/109 (33.03%), Postives = 49/109 (44.95%), Query Frame = 0 

Query: 10  VRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDIATRI 69
           V+A H+L + QG    A  K  +G                 + N      A+F  IA   
Sbjct: 43  VKARHVLCEKQGKINEAYKKLQDG----------------WLSNGDKVPPAEFAKIAAEY 102

Query: 70  SDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHII 119
           S+C S K+GGDLG F RG+M  PF++  +   VG  S    +  G HII
Sbjct: 103 SECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHII 135

[Close]
BLAST of CsaV3_4G005720 vs. Swiss-Prot
Match: sp|Q94G00|PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.5e-51
Identity = 99/119 (83.19%), Postives = 111/119 (93.28%), Query Frame = 0 

Query: 3   SSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKF 62
           SS+A  QVRASHILIKHQGSRR ASWKDPEG+II+NTTR+SAVSQL  +R+DI+SGKAKF
Sbjct: 2   SSSAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKF 61

Query: 63  EDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRT 122
           +D+A R SDCSSAKRGGDLGPFGR QMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKRT
Sbjct: 62  DDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRT 120

[Close]
BLAST of CsaV3_4G005720 vs. Swiss-Prot
Match: sp|Q9SL42|PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.8e-50
Identity = 97/118 (82.20%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 5   AATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTRE+AV QL  IR DI+SGKA FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  IATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 123
           +ATR+SDCSSAKRGGDLG FGRGQMQKPFEEATYALKVG+ISDI+DTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of CsaV3_4G005720 vs. Swiss-Prot
Match: sp|Q9LEK8|PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-44
Identity = 86/116 (74.14%), Postives = 101/116 (87.07%), Query Frame = 0 

Query: 6   ATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDI 65
           ++ +VRASHILIKHQGSRR +SWKDP+G +I  TTR+ AVSQL  +R +++S  A F D+
Sbjct: 2   SSEKVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDL 61

Query: 66  ATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRT 122
           A+R S CSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGEISDI+DTDSGVHIIKRT
Sbjct: 62  ASRHSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 117

[Close]
BLAST of CsaV3_4G005720 vs. Swiss-Prot
Match: sp|P54353|DOD_DROME (Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster OX=7227 GN=dod PE=2 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 5.7e-27
Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 6   ATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDI 65
           A  +V   H+L+KH+GSRRP+SW+  E  I +  T+E A   L V RN I+  +A F+++
Sbjct: 54  APDEVHCLHLLVKHKGSRRPSSWR--EANITR--TKEEAQLLLEVYRNKIVQQEATFDEL 113

Query: 66  ATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 123
           A   SDCSSAKRGGDLG FGRGQMQ  FE+A + L V ++S I+D+DSG+HII R A
Sbjct: 114 ARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLSGIVDSDSGLHIILRKA 166

[Close]
BLAST of CsaV3_4G005720 vs. Swiss-Prot
Match: sp|P0C1J8|PIN1_RHIO9 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=pin1 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.7e-27
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 0 

Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDIATR 68
           +VRASH+LIK + SRRP+SW++         ++E A+  LT  ++ I SG+     +AT 
Sbjct: 41  RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 100

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 123
            SDC+SAKRGGDLG F RGQMQKPFEEAT+AL+VGE+S  + TDSGVH+I RTA
Sbjct: 101 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150

[Close]
BLAST of CsaV3_4G005720 vs. TrEMBL
Match: tr|A0A0A0KZK7|A0A0A0KZK7_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G046790 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.9e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CsaV3_4G005720 vs. TrEMBL
Match: tr|A0A1S3BSY5|A0A1S3BSY5_CUCME (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103493185 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.6e-58
Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSSA T QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIR+DIISGKA
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGEISDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CsaV3_4G005720 vs. TrEMBL
Match: tr|A7DX09|A7DX09_LOTJA (Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus OX=34305 GN=pin1 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 101/121 (83.47%), Postives = 116/121 (95.87%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           MSSS+++ +VRASHILIKHQGSRR ASWKDPEGR+IKNTTRESAV+QL+ +R DI+SGKA
Sbjct: 1   MSSSSSSGEVRASHILIKHQGSRRKASWKDPEGRVIKNTTRESAVAQLSTLREDILSGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
            FED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVG+IS+I+DTDSGVHIIKR
Sbjct: 61  NFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGDISEIVDTDSGVHIIKR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of CsaV3_4G005720 vs. TrEMBL
Match: tr|A0A2K1ZMH0|A0A2K1ZMH0_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa OX=3694 GN=POPTR_007G013400v3 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.3e-51
Identity = 100/121 (82.64%), Postives = 113/121 (93.39%), Query Frame = 0 

Query: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60
           M+SSA+  QVRASHILIKH+GSRR ASWKDPEGR+IKNTTR+SA+S+L  IR DI+SGKA
Sbjct: 1   MASSASGTQVRASHILIKHEGSRRKASWKDPEGRVIKNTTRDSAISELKAIREDIVSGKA 60

Query: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEE T++LKVGEISDI+DTDSGVHII R
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEETTFSLKVGEISDIVDTDSGVHIILR 120

Query: 121 T 122
           T
Sbjct: 121 T 121

[Close]
BLAST of CsaV3_4G005720 vs. TrEMBL
Match: tr|A0A2I4DEC5|A0A2I4DEC5_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Juglans regia OX=51240 GN=LOC108979292 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-50
Identity = 105/122 (86.07%), Postives = 113/122 (92.62%), Query Frame = 0 

Query: 1   MSSSAATA-QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGK 60
           MS+S  TA QVRASHILIKHQGSRR ASWKDPEG++I NTTRESAVSQL  + +DI+SGK
Sbjct: 1   MSASTTTANQVRASHILIKHQGSRRKASWKDPEGQVIMNTTRESAVSQLKSLYDDIVSGK 60

Query: 61  AKFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIK 120
           AKFEDIA+R SDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDI+DTDSGVHIIK
Sbjct: 61  AKFEDIASRSSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIVDTDSGVHIIK 120

Query: 121 RT 122
           RT
Sbjct: 121 RT 122

The following BLAST results are available for this feature:
BLAST of CsaV3_4G005720 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146507.14.4e-60100.00PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus] >KGN53316.... [more]
XP_008452069.17.0e-5895.90PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo][more]
XP_022943036.11.7e-5691.80peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 pe... [more]
XP_022984600.13.8e-5691.80peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1... [more]
XP_022929403.15.0e-5691.80peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata][more]
BLAST of CsaV3_4G005720 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18040.11.5e-5182.20peptidylprolyl cis/trans isomerase, NIMA-interacting 1[more]
AT1G26550.11.4e-0733.03FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
BLAST of CsaV3_4G005720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94G00|PIN1_MALDO1.5e-5183.19Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2... [more]
sp|Q9SL42|PIN1_ARATH2.8e-5082.20Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1... [more]
sp|Q9LEK8|PIN1_DIGLA2.3e-4474.14Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12.... [more]
sp|P54353|DOD_DROME5.7e-2752.99Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster OX=... [more]
sp|P0C1J8|PIN1_RHIO95.7e-2756.14Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 /... [more]
BLAST of CsaV3_4G005720 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZK7|A0A0A0KZK7_CUCSA2.9e-60100.00Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G046790 P... [more]
tr|A0A1S3BSY5|A0A1S3BSY5_CUCME4.6e-5895.90Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103493185 PE=4... [more]
tr|A7DX09|A7DX09_LOTJA1.1e-5183.47Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus OX=34305 GN=pin1 PE=2 SV=... [more]
tr|A0A2K1ZMH0|A0A2K1ZMH0_POPTR9.3e-5182.64Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa OX=3694 GN=POPTR_007G... [more]
tr|A0A2I4DEC5|A0A2I4DEC5_9ROSI2.1e-5086.07Peptidyl-prolyl cis-trans isomerase OS=Juglans regia OX=51240 GN=LOC108979292 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006833 water transport
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009651 response to salt stress
biological_process GO:0051788 response to misfolded protein
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G005720.1CsaV3_4G005720.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.50.40coord: 4..122
e-value: 3.3E-49
score: 168.1
NoneNo IPR availablePANTHERPTHR10657PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 4..121
NoneNo IPR availablePANTHERPTHR10657:SF4PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1coord: 4..121
NoneNo IPR availableSUPERFAMILYSSF54534FKBP-likecoord: 7..121
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 14..121
e-value: 3.4E-24
score: 85.5
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 7..122
score: 28.73

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G005720CSPI04G05560Wild cucumber (PI 183967)cpicucB213
CsaV3_4G005720Cucsa.106590Cucumber (Gy14) v1cgycucB134
CsaV3_4G005720CmaCh16G006120Cucurbita maxima (Rimu)cmacucB0393
CsaV3_4G005720CmaCh04G007520Cucurbita maxima (Rimu)cmacucB0847
CsaV3_4G005720CmoCh16G006680Cucurbita moschata (Rifu)cmocucB0388
CsaV3_4G005720CmoCh04G008010Cucurbita moschata (Rifu)cmocucB0833
CsaV3_4G005720Cp4.1LG14g01860Cucurbita pepo (Zucchini)cpecucB0266
CsaV3_4G005720Cp4.1LG01g06740Cucurbita pepo (Zucchini)cpecucB0497
CsaV3_4G005720CsGy4G005440Cucumber (Gy14) v2cgybcucB171
CsaV3_4G005720Carg14150Silver-seed gourdcarcucB0982
CsaV3_4G005720Carg05735Silver-seed gourdcarcucB1063
CsaV3_4G005720Cla014591Watermelon (97103) v1cucwmB322
CsaV3_4G005720MELO3C016377Melon (DHL92) v3.5.1cucmeB315
CsaV3_4G005720ClCG07G008440Watermelon (Charleston Gray)cucwcgB344
CsaV3_4G005720Lsi07G002610Bottle gourd (USVL1VR-Ls)cuclsiB322
CsaV3_4G005720MELO3C016378.2Melon (DHL92) v3.6.1cucmedB307
CsaV3_4G005720Cla97C07G135510Watermelon (97103) v2cucwmbB330
CsaV3_4G005720Bhi01G001840Wax gourdcucwgoB372
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G005720Wax gourdcucwgoB381
CsaV3_4G005720Cucumber (Chinese Long) v3cuccucB181
CsaV3_4G005720Silver-seed gourdcarcucB0440
CsaV3_4G005720Cucumber (Gy14) v2cgybcucB287
CsaV3_4G005720Cucurbita maxima (Rimu)cmacucB0796
CsaV3_4G005720Cucurbita moschata (Rifu)cmocucB0779
CsaV3_4G005720Cucurbita pepo (Zucchini)cpecucB0089
CsaV3_4G005720Wild cucumber (PI 183967)cpicucB352
CsaV3_4G005720Bottle gourd (USVL1VR-Ls)cuclsiB276
CsaV3_4G005720Melon (DHL92) v3.5.1cucmeB342
CsaV3_4G005720Melon (DHL92) v3.6.1cucmedB336
CsaV3_4G005720Watermelon (Charleston Gray)cucwcgB300
CsaV3_4G005720Watermelon (97103) v1cucwmB344
CsaV3_4G005720Watermelon (97103) v2cucwmbB271