CmoCh04G008010 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G008010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPeptidyl-prolyl cis-trans isomerase 1
LocationCmo_Chr04 : 4008984 .. 4011853 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACGAGGCTTAGCAAGTATGTTGGCATGGAATCATATTCGGGAAGGAAAGTATATCTTATTAATAGAAGTTGTAACTTAATTCTTCTAAGCATTTTTCAATTATCATACCCTTCGTTCTTATTCGAATGTAATGTTAGTTCATTCATATATTTTTTTTTACTCGAGCGTCACATAACCTTTCAACAAGTTTAATGTAGCGGATATTGTTCATTTTAGCTCGTTATGTACGTATGAGTCTTACAATTTTAAAATGGTTAAGGAAAGATTTCCAAGCTTTTGTAACATCAAGGTAGGATCTCATGATCCACCCATTTTAAGGGACCAATAACCCCGCCAACACACAGAATATTGTACGACTTTCTTTTTCTTTTTATTATGCGTGCCTCTATCATAATAAATATTAATTACTGAAAGGGCTAGATATTTCCCAAGCACTGGAACGGACGGTAGAGATTGGATCACTAGCTGTAACGATCCGCAGTGGAAAAGCCTCTCCGCTTTTCTGGAACTATCTAATAATATATATATTCTCGACTCTCTCGTGCCAAGAGCTCGCCACTGTCTGCACCAATCTAAGTGAAAGGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCGCATACTGATCTCATATCTTTATTATCTTGATTTTTCTGGCCATTACGTAGAGTAATTGTTTCTTTTTGTTTGCCATTTCTGGTCGGATTTGTGTAGTTTTCAGTCCGGAATTAGATAGGATTCACTTTATCATGAATTGAACCTGGAACCCTAGACTTAACCGTGAGGGATCTTAGTGTTTGGATTGCGGTATTGCTAGTTCGAGATATTAGATTTAGGTTTTAGTTCAATGAATTTTATTTACAGGGAGGATATCTATGTATCGCTTGGATTCAATTGGAGATGTGTGTCTATTGTATTTACTTATTTGCTTCGTGTAAGATTTGGAATTCTTCTTGTTTTGGTTTGAATTGAAATAGTACAGGATACTATCGTGTATGATTATTCCCTGCCGCTCTCGGATACCAAACATAATTTGTTGAATTGTGGTCTATGATTGAGGAACTTTGTTATACCTCAATTTCTAAGTTGAATTTCACTTTATGAAAAAACTATAATGATAATGCTCAAACAATTATCACAAGGTCGTGATTACTTTTGGACTTTGCGATGAAGTTGTGTGATACCGTGATGAATATAACCATTTATGTTTGACCATTTTACTTGAAAACCGATGAAAGGATTACTTACTCAGTACTTGATTTTAGCTAAATGGTTAAATCAACCATTCAATCGGAATATCCGTTTAGAGCCTCTCATATATTGGTAAAAAGTGAGAACATCAACACTTTGAAAGTGTCGCTATCAAGAAAATTTCTACCTGCTGGTGTGGAGACTTTTTTGCTCCAGTAAATACTTTAGATTTAATAATTCCATGAGATCTAGGAACTTAGCTTTGGAAATCAAAGGGAGAGGTGGAGATGTAGCAATAGTTTTACTTGTTAGTAATATTTCACTATAATCTGGTATAATCAGACCCACACATCAAAAGAATTAAAACAACAAAATTTGAACAACCCTTTCTGGTAAAATTGGTTCTATCTAGGATTGCAGTTCTCTTTTCCCCCACTGAAATGTATACTTCGTTAGTGTAGATGGAGCCATAATTTTTCATGGGGAGAGGCGAACTCTTAGCTTCCAACTTTTCATTATATGAAATAAATTTCCAATTCTAAACATGTAGAGAAAATTTGAGAGAAAAATTATAAATCGAACTTTGTATACAACTTTTTAAATCTAAAATGAACCCAGCCCTCCTCTTTCTGCTCCACCCCTGGTTGTCTCTTGCTAGAAATTTGTAGTTGTGTACTCTCCTTCCAAGCCCGATTAGTAAAATCCCAGAGAGTAATTGTGTTCGGTAGTTCAATAGCAGGTACATTTGGACATTTTCTAGGATCACAAGGATATGTTATGATATTTTGTTCGTAAGCAAGCTGATATTTTATTCTAGCAATTGTTTTTGTGTGGATTAGCACAATGTAGAATGCGTCTAAATGAGCAACACACTGACGTTATTGCAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCCTCCTTATTGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTCCAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTGACCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGATATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGCGTCTTTTATTACGCCTCATTTGTCTGCTCAACCTCCTAGG

mRNA sequence

ATGGATACGAGGCTTAGCAAGTATGTTGGCATGGAATCATATTCGGGAAGGAAAGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAAATTCTCTCATAAATCCTCCTTATTGAAGCATTTAATCTATTTGGCTGAAGTTATTCGAGAAGGATTTGGTTCTACTCCAGGCGACACGAATTTGTTGCTATGCTCTTGATAGTACAGGACAATTCATGTTGTGATTTGGCTATAGCTACTCTGTTTCAGTGACCTAAGAATTTTCTTGAAGTTCGATGCTTTTATGCCATTGAATTTTTGGCTCTGTAAACGTGACAGATATTTGCGTTCAAGTGGTTGTGATTTGAATTGTTTGCGTCTTTTATTACGCCTCATTTGTCTGCTCAACCTCCTAGG

Coding sequence (CDS)

ATGGATACGAGGCTTAGCAAGTATGTTGGCATGGAATCATATTCGGGAAGGAAAGAAAAAGCGAGGGCCGCGCCACCGTTTCTATCACCGGCTGCCAAGATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTCTTCGATCTCCTCTGCAGATCGATCTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAGAACAAGATGTCCTCTTCGGCGGCCGCAGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCTCGACGGCCTGCTTCGTGGAAGGATCCGGAAGGCCGAATTATCAAGAACACCACTCGCGACAGCGCCGTCTCTCAGCTTACTGTTATTCGAGACGACATCATTTCCGGCAAGTCCAAGTTTGAGGACGTTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGACACTGACAGTGGAGTTCACATCATCAAGCGGACTGCTTAA
Homology
[Close]
BLAST of CmoCh04G008010 vs. Swiss-Prot
Match: PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.6e-52
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 1 

Query: 68  SSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKF 127
           SS+A  QVRASHILIKHQGSRR ASWKDPEG+II+NTTRDSAVSQL  +RDDI+SGK+KF
Sbjct: 2   SSSAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKF 61

Query: 128 EDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
           +D+A+R SDCSSAKRGGDLGPFGR QMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 62  DDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRT 120

[Close]
BLAST of CmoCh04G008010 vs. Swiss-Prot
Match: PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-48
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 1 

Query: 70  AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 129
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 130 VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of CmoCh04G008010 vs. Swiss-Prot
Match: PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-44
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 1 

Query: 74  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 133
           +VRASHILIKHQGSRR +SWKDP+G +I  TTRD AVSQL  +R +++S  + F D+ASR
Sbjct: 5   KVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDLASR 64

Query: 134 ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
            S CSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 65  HSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 117

[Close]
BLAST of CmoCh04G008010 vs. Swiss-Prot
Match: PIN1_RHIO9 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=pin1 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 1 

Query: 74  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASR 133
           +VRASH+LIK + SRRP+SW++         +++ A+  LT  +  I SG+     +A+ 
Sbjct: 41  RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 100

Query: 134 ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
            SDC+SAKRGGDLG F RGQMQKPFEEATFAL+VGE+S  V TDSGVH+I RTA
Sbjct: 101 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150

[Close]
BLAST of CmoCh04G008010 vs. Swiss-Prot
Match: DOD_DROME (Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster GN=dod PE=2 SV=3)

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-25
Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 1 

Query: 71  AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDV 130
           A  +V   H+L+KH+GSRRP+SW+  E  I +  T++ A   L V R+ I+  ++ F+++
Sbjct: 54  APDEVHCLHLLVKHKGSRRPSSWR--EANITR--TKEEAQLLLEVYRNKIVQQEATFDEL 113

Query: 131 ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
           A   SDCSSAKRGGDLG FGRGQMQ  FE+A F L V ++S IVD+DSG+HII R A
Sbjct: 114 ARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLSGIVDSDSGLHIILRKA 166

[Close]
BLAST of CmoCh04G008010 vs. TrEMBL
Match: A0A0A0KZK7_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.1e-56
Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = 1 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 186 TA 188
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CmoCh04G008010 vs. TrEMBL
Match: A0A061DFC2_THECC (Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-55
Identity = 128/176 (72.73%), Postives = 142/176 (80.68%), Query Frame = 1 

Query: 28  LSPAAKIDSDRKRKKSASSISSADRS-AKEKRSSS----------------KKNKMSSSA 87
           L  AAKIDSDRKRKK+  SISSADR+ A EK+                   KK+KMSSS 
Sbjct: 9   LPKAAKIDSDRKRKKA--SISSADRTEAAEKQKGKNPTSTSNHHHQSHHHRKKSKMSSST 68

Query: 88  AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDV 147
           AA QVRA+HILIKHQGSRR ASWKDPEGR+I NTTRD+AVSQL  +RDDI+SGK+KF++V
Sbjct: 69  AANQVRAAHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIVSGKAKFDEV 128

Query: 148 ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
           ASR SDCSSAKRGGDLGPFGRGQMQKPFE AT+ALKVGE+SDIVDTDSGVHII RT
Sbjct: 129 ASRYSDCSSAKRGGDLGPFGRGQMQKPFENATYALKVGEISDIVDTDSGVHIIMRT 182

[Close]
BLAST of CmoCh04G008010 vs. TrEMBL
Match: A0A0D2T5K4_GOSRA (Peptidylprolyl isomerase OS=Gossypium raimondii GN=B456_011G099300 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.7e-55
Identity = 127/174 (72.99%), Postives = 143/174 (82.18%), Query Frame = 1 

Query: 28  LSPAAKIDSDRKRKKSASSISSADRSA-------KEKRSSS--------KKNKMSSSAAA 87
           +S AAKIDSDRKRKKS  SISSADR+A       K+K  +S        KK+KMSSS+ A
Sbjct: 34  VSKAAKIDSDRKRKKS--SISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPA 93

Query: 88  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVAS 147
            QVRASHILIKHQGSRR ASWKDPEGR+I NTTRD+AVSQL  +RDDI SG +KF +VAS
Sbjct: 94  NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVAS 153

Query: 148 RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
           R SDCSSAKRGGDLGPFGRGQMQKPFE+AT++LK+GE+SDIVDTDSGVHII RT
Sbjct: 154 RHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMRT 205

[Close]
BLAST of CmoCh04G008010 vs. TrEMBL
Match: W9SN23_9ROSA (Peptidylprolyl isomerase OS=Morus notabilis GN=L484_026702 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.8e-55
Identity = 122/157 (77.71%), Postives = 136/157 (86.62%), Query Frame = 1 

Query: 36  SDRKRKKSASSISSADRSAKEKRSSS----KKNKMSSSAAAG-QVRASHILIKHQGSRRP 95
           SDRKRKK   SIS+ADR+  ++R SS    KK KMSSS++   QVRASHILIKHQGSRR 
Sbjct: 247 SDRKRKKPPPSISAADRTKSKERGSSSSAKKKTKMSSSSSGNNQVRASHILIKHQGSRRK 306

Query: 96  ASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVASRISDCSSAKRGGDLGPFG 155
           ASWKDPEGR+I NTTRD+AVSQL  +RDDI+SGK+KF+ VASR SDCSSAKRGGDLGPFG
Sbjct: 307 ASWKDPEGRVISNTTRDAAVSQLKSLRDDIVSGKAKFDAVASRYSDCSSAKRGGDLGPFG 366

Query: 156 RGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
           RGQMQKPFEEAT+ALKVGE+SDIVDTDSGVHII RTA
Sbjct: 367 RGQMQKPFEEATYALKVGEISDIVDTDSGVHIIMRTA 403

[Close]
BLAST of CmoCh04G008010 vs. TrEMBL
Match: A0A059AHH1_EUCGR (Peptidylprolyl isomerase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J02408 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.3e-53
Identity = 126/181 (69.61%), Postives = 147/181 (81.22%), Query Frame = 1 

Query: 17  RKEKARAAPPFLSPAAKIDS-DRKRKK-SASSISSADRSAKEKRSSSKKN----KMSSSA 76
           R E +R   P    +AKI+S DRKRK+ S+S+ISSAD SA +  S   K+    KMSSSA
Sbjct: 8   RSEGSRTRSPSSPASAKIESADRKRKRPSSSTISSADPSAAKSGSLRDKHRAKAKMSSSA 67

Query: 77  AAG-----QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 136
           A       QVRASHILIKH+GSRR ASWKDPEGR+I++TTR+SAVSQL  +R+DI++GK+
Sbjct: 68  AGAAAAGSQVRASHILIKHEGSRRKASWKDPEGRVIRSTTRESAVSQLKALREDIVAGKA 127

Query: 137 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 187
           KFED+ASR SDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDIVDTDSGVHII R
Sbjct: 128 KFEDLASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIVDTDSGVHIIMR 187

[Close]
BLAST of CmoCh04G008010 vs. TAIR10
Match: AT2G18040.1 (AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1)

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-49
Identity = 94/118 (79.66%), Postives = 108/118 (91.53%), Query Frame = 1 

Query: 70  AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 129
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 130 VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 188
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: gi|659102324|ref|XP_008452069.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 6.0e-57
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 1 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 186 TA 188
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: gi|449457542|ref|XP_004146507.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 8.7e-56
Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = 1 

Query: 66  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 125
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 126 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 185
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 186 TA 188
           TA
Sbjct: 121 TA 122

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: gi|590702875|ref|XP_007046727.1| (Peptidylprolyl cis/trans isomerase [Theobroma cacao])

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-55
Identity = 128/176 (72.73%), Postives = 142/176 (80.68%), Query Frame = 1 

Query: 28  LSPAAKIDSDRKRKKSASSISSADRS-AKEKRSSS----------------KKNKMSSSA 87
           L  AAKIDSDRKRKK+  SISSADR+ A EK+                   KK+KMSSS 
Sbjct: 9   LPKAAKIDSDRKRKKA--SISSADRTEAAEKQKGKNPTSTSNHHHQSHHHRKKSKMSSST 68

Query: 88  AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDV 147
           AA QVRA+HILIKHQGSRR ASWKDPEGR+I NTTRD+AVSQL  +RDDI+SGK+KF++V
Sbjct: 69  AANQVRAAHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIVSGKAKFDEV 128

Query: 148 ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
           ASR SDCSSAKRGGDLGPFGRGQMQKPFE AT+ALKVGE+SDIVDTDSGVHII RT
Sbjct: 129 ASRYSDCSSAKRGGDLGPFGRGQMQKPFENATYALKVGEISDIVDTDSGVHIIMRT 182

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: gi|823241249|ref|XP_012453241.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase ssp-1-like [Gossypium raimondii])

HSP 1 Score: 221.9 bits (564), Expect = 9.6e-55
Identity = 127/174 (72.99%), Postives = 143/174 (82.18%), Query Frame = 1 

Query: 28  LSPAAKIDSDRKRKKSASSISSADRSA-------KEKRSSS--------KKNKMSSSAAA 87
           +S AAKIDSDRKRKKS  SISSADR+A       K+K  +S        KK+KMSSS+ A
Sbjct: 102 VSKAAKIDSDRKRKKS--SISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPA 161

Query: 88  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVAS 147
            QVRASHILIKHQGSRR ASWKDPEGR+I NTTRD+AVSQL  +RDDI SG +KF +VAS
Sbjct: 162 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVAS 221

Query: 148 RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
           R SDCSSAKRGGDLGPFGRGQMQKPFE+AT++LK+GE+SDIVDTDSGVHII RT
Sbjct: 222 RHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMRT 273

[Close]
BLAST of CmoCh04G008010 vs. NCBI nr
Match: gi|763804030|gb|KJB70968.1| (hypothetical protein B456_011G099300 [Gossypium raimondii])

HSP 1 Score: 221.9 bits (564), Expect = 9.6e-55
Identity = 127/174 (72.99%), Postives = 143/174 (82.18%), Query Frame = 1 

Query: 28  LSPAAKIDSDRKRKKSASSISSADRSA-------KEKRSSS--------KKNKMSSSAAA 87
           +S AAKIDSDRKRKKS  SISSADR+A       K+K  +S        KK+KMSSS+ A
Sbjct: 34  VSKAAKIDSDRKRKKS--SISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPA 93

Query: 88  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDVAS 147
            QVRASHILIKHQGSRR ASWKDPEGR+I NTTRD+AVSQL  +RDDI SG +KF +VAS
Sbjct: 94  NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVAS 153

Query: 148 RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 187
           R SDCSSAKRGGDLGPFGRGQMQKPFE+AT++LK+GE+SDIVDTDSGVHII RT
Sbjct: 154 RHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMRT 205

The following BLAST results are available for this feature:
BLAST of CmoCh04G008010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PIN1_MALDO2.6e-5285.71Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1[more]
PIN1_ARATH3.0e-4879.66Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV... [more]
PIN1_DIGLA2.6e-4477.88Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV... [more]
PIN1_RHIO91.2e-2556.14Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 /... [more]
DOD_DROME2.7e-2552.14Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster GN=... [more]
BLAST of CmoCh04G008010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZK7_CUCSA6.1e-5691.80Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1[more]
A0A061DFC2_THECC1.4e-5572.73Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1[more]
A0A0D2T5K4_GOSRA6.7e-5572.99Peptidylprolyl isomerase OS=Gossypium raimondii GN=B456_011G099300 PE=4 SV=1[more]
W9SN23_9ROSA8.8e-5577.71Peptidylprolyl isomerase OS=Morus notabilis GN=L484_026702 PE=4 SV=1[more]
A0A059AHH1_EUCGR6.3e-5369.61Peptidylprolyl isomerase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J02408 PE=4... [more]
BLAST of CmoCh04G008010 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18040.11.7e-4979.66 peptidylprolyl cis/trans isomerase, NIMA-interacting 1[more]
BLAST of CmoCh04G008010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102324|ref|XP_008452069.1|6.0e-5794.26PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo][more]
gi|449457542|ref|XP_004146507.1|8.7e-5691.80PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus][more]
gi|590702875|ref|XP_007046727.1|1.9e-5572.73Peptidylprolyl cis/trans isomerase [Theobroma cacao][more]
gi|823241249|ref|XP_012453241.1|9.6e-5572.99PREDICTED: peptidyl-prolyl cis-trans isomerase ssp-1-like [Gossypium raimondii][more]
gi|763804030|gb|KJB70968.1|9.6e-5572.99hypothetical protein B456_011G099300 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC
IPR023058PPIase_PpiC_CS
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0009853 photorespiration
biological_process GO:0006833 water transport
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009651 response to salt stress
biological_process GO:0051788 response to misfolded protein
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005575 cellular_component
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0016853 isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G008010.1CmoCh04G008010.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 79..186
score: 3.5
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROFILEPS50198PPIC_PPIASE_2coord: 72..187
score: 28
IPR023058Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved sitePROSITEPS01096PPIC_PPIASE_1coord: 127..147
scor
NoneNo IPR availableGENE3DG3DSA:3.10.50.40coord: 74..186
score: 2.1
NoneNo IPR availablePANTHERPTHR10657PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 58..186
score: 3.7
NoneNo IPR availablePANTHERPTHR10657:SF4PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1coord: 58..186
score: 3.7
NoneNo IPR availableunknownSSF54534FKBP-likecoord: 72..186
score: 1.18