CmaCh16G006120 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G006120
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Peptidyl-prolyl cis-trans isomerase 1
Location	Cma_Chr16 : 3176537 .. 3179428 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGATGCTCTGTATTGCCATGCGGTAATTGCTAGAACCTTTGTCTAGATTCATTAATTAATACTTTTCTACATTTTTTAAAATTAAAAAATAATCTTAACATTAGTAATAGATTTAAAAAATCTGCAACCGCTAGATATTTCAGAAGCACAGAAACGGACGGTGGAGATTGAATTGCTAGCAGTACGGAAACGAAGTGGAGAAGTATCTCCAGTTCCCATTCTCTCGTGCCTACCATTGTCGAGAGCTCGCCACTATCTCCACCAATCCAAGTGAAAGAAAAAGCGAGGGCGGCGCCACCGTTGGTATCACAGGCTGCCAAGATAGATTCCGATCGCAAACGGAAGAAATCGGCTTCGTCGATCTCCTCTGCGGATCGAACTGCGAAGGAAAAGCGAAGCAGCAGTAAGAAGAACAAGATGTCCTCTTCGGCGGCTGCCGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCACGACGTCCTGCTTCGTGGAAGGATCCGGAAGGCAGAATTATCAAGAACACTACTCGCGAAAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCTAAGTTTGAGGATGTTGCCTCTCGCATTTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTGCGCTAACGTCCTTTCTCTATTTTCTGTTCGTTACGTACTTGTTCTTTTTTATTTGTCATTTCTATTTGTGCCTGGATGTCTGTATCTTGCTTGGATTTTATTGGAGATATGTGTCGATTATATTTACGTTTTGCTTCGTATAAGGGTTGGAATTCATCTCGTTTTGGTTGTACAGGTCTCCAAGTTGAATTTCTACTTGCGTTTTGAAAATCCTATTATGATCCTGCGTTGTCAAGGCTCTAACACTTATCATAAGATTGTGAAATATTTGGTTACCTTCTTTCTTGCTTTTAGATTACGGGACAAAGTTGATTGTGTTAGGAATTACATACCGTTCACTTTAAGAATAATCTCTTGTTGTTTTGATTTTGATTTTTCCAAAATTTCTCATACCTGTATTCACCCGGTTGTAATTTCATGATCATCCCCTTAATTAGCCAGCAAATGTAGGACAACAATCCTCAACAATTTTCTCCTCGAACAACGTACACCATAGAAACTCTCATGAGACCTATGGAATCCTCGAACAACCTCCCCTTAATTGAGGTTGACTCCTTTTTCTGGAGCCCTCGAACAAAATACACCCTTTGTTCGACACTTGAGTCACTTTTGACTACACCCTCGAAGCTAGCAACTTCTTTGTTCGACACTCGAGACTTCGATTAGCATGACTAAGTTAAGGACATGACTCGGATACCATGTTAGGAATCACAGACCTCCACAATAGTATGATATTGTCCACTTTAAGCCTAAGCTCTCATGACTTTGTTTTAAGTTTTTTCAAAAGGCCTCGTATCAATGGAGATGTATTACTTACTTATAAACCCATGATCATCTCCTTAATTAGCCAACATGAGACTCCCTCCCAACCTCCCAACCATCCTCAACCGGTTGATGCTACTATGATGGATATAATTTGTTGGGTTAGATCATTTTACTTAAAAACTTATTTAAGGACTACTTACTCGGTGCTTGATTTTAACTTAGCTAAACAGGATTCCTTGATGGGATGTCAATTTGTTTCACCATCTATTCAATTGGAAATCCATCTAGAGCTCCTCTTATATTTGGTAAAACGCAGTAACATCAACACTATGAAAGTGCCCGTCTATATAATTTCTGCCTGCTGGTGTGAATAAACTTTTGGCCCCGGCTAATACTAAAGATTTTAAAATATATGAGATGGAGAAGCAGCAATAATTTTACCCGTTACTAGTATTCCACCATAAACTGGTACATCATCTGAACTGTATAATTGGTTCTATTTAATCTTGTAGTCTATTTTCCCCCTCTGAACTGTATTTCAAGTTAGTTTTACCTGAAATATGTGCTAGCGAAGAGGTTGTTCCTCGAAGTGGAGTAGACAAGAGGCGGTGTGCCAGTAAGGACACTAGACCTCGAAAGGGGGTGGATTTGGTGGCGGTCTCACATCGATTGGAGAAAGGAACGAGTGCTAGCGAGGACGCTGGGCCCTAAAGGGGGATGAATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAATACCATTTATAAGGATATGGAAACCTTCTCCTAGTAGACTTGTTTTAAAGCCTTGAAGGGAAGCCCGAAAGGAAATTCCAAAGAGGACAATATCTACTAGTGATGGGCCTGAGTCGTTACAATTTAGTAGTTCAGTAGCAGTTTTTTTTAGATCATTTCTAAGATCAGAAGGATATGCTGTGATGTTCTATTCGTTAGTAGCTGACAGTTTATTCTAGCAACTGTTTGTGCGTGGATTAGCATTAAATACACTGCATCTGAATGAGCCAGAACACAATAATGTTATTGCAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATAATCAAGCGGATTGCTTAACTTCTCTCATGAATTTCCATGCTCTAATGATGAAAGCATTTAATCCATTTGGCCTTTGGGCTAATCGAAGTGTTCAAGTAGGGTTTGGCTATAGCTACTCTGTTTCAGTGACCTAAGATTTTTCTGCAGTTCGATGATTTATGCCATTGGATTATTGCCTTTTTAAATGCGACAACATTAACGCTCAAGCCGATATGGTTTGAATTGTTTGCACCCATAAAGTAGAAGGTCGAACATCTGACTTCTTGATCAATATTATTATCTATAATTTATCTGTTCAA

mRNA sequence

ATGGCTTGGATGCTCTGTATTGCCATGCGTACGGAAACGAAGTGGAGAAGTATCTCCAGTTCCCATTCTCTCGTGCCTACCATTGTCGAGAGCTCGCCACTATCTCCACCAATCCAAGTGAAAGAAAAAGCGAGGGCGGCGCCACCGTTGGTATCACAGGCTGCCAAGATAGATTCCGATCGCAAACGGAAGAAATCGGCTTCGTCGATCTCCTCTGCGGATCGAACTGCGAAGGAAAAGCGAAGCAGCAGTAAGAAGAACAAGATGTCCTCTTCGGCGGCTGCCGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCACGACGTCCTGCTTCGTGGAAGGATCCGGAAGGCAGAATTATCAAGAACACTACTCGCGAAAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCTAAGTTTGAGGATGTTGCCTCTCGCATTTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATAATCAAGCGGATTGCTTAACTTCTCTCATGAATTTCCATGCTCTAATGATGAAAGCATTTAATCCATTTGGCCTTTGGGCTAATCGAAGTGTTCAAGTAGGGTTTGGCTATAGCTACTCTGTTTCAGTGACCTAAGATTTTTCTGCAGTTCGATGATTTATGCCATTGGATTATTGCCTTTTTAAATGCGACAACATTAACGCTCAAGCCGATATGGTTTGAATTGTTTGCACCCATAAAGTAGAAGGTCGAACATCTGACTTCTTGATCAATATTATTATCTATAATTTATCTGTTCAA

Coding sequence (CDS)

ATGGCTTGGATGCTCTGTATTGCCATGCGTACGGAAACGAAGTGGAGAAGTATCTCCAGTTCCCATTCTCTCGTGCCTACCATTGTCGAGAGCTCGCCACTATCTCCACCAATCCAAGTGAAAGAAAAAGCGAGGGCGGCGCCACCGTTGGTATCACAGGCTGCCAAGATAGATTCCGATCGCAAACGGAAGAAATCGGCTTCGTCGATCTCCTCTGCGGATCGAACTGCGAAGGAAAAGCGAAGCAGCAGTAAGAAGAACAAGATGTCCTCTTCGGCGGCTGCCGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCACGACGTCCTGCTTCGTGGAAGGATCCGGAAGGCAGAATTATCAAGAACACTACTCGCGAAAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCCGGCAAGTCTAAGTTTGAGGATGTTGCCTCTCGCATTTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATAATCAAGCGGATTGCTTAA

Protein sequence

MAWMLCIAMRTETKWRSISSSHSLVPTIVESSPLSPPIQVKEKARAAPPLVSQAAKIDSDRKRKKSASSISSADRTAKEKRSSSKKNKMSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRIA

Homology

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BLAST of CmaCh16G006120 vs. Swiss-Prot
Match: PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.3e-51
Identity = 100/118 (84.75%), Postives = 111/118 (94.07%), Query Frame = 1


Query: 91  SSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKF 150
           SS+A  QVRASHILIKHQGSRR ASWKDPEG+II+NTTR+SAVSQL  +RDDI+SGK+KF
Sbjct: 2   SSSAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKF 61

Query: 151 EDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 209
           +D+A+R SDCSSAKRGGDLGPFGR QMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 62  DDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKR 119

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BLAST of CmaCh16G006120 vs. Swiss-Prot
Match: PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 7.5e-48
Identity = 94/118 (79.66%), Postives = 107/118 (90.68%), Query Frame = 1


Query: 93  AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFED 152
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTRE+AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 153 VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRIA 211
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKR A
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

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BLAST of CmaCh16G006120 vs. Swiss-Prot
Match: PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.3e-43
Identity = 86/112 (76.79%), Postives = 98/112 (87.50%), Query Frame = 1


Query: 97  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVASR 156
           +VRASHILIKHQGSRR +SWKDP+G +I  TTR+ AVSQL  +R +++S  + F D+ASR
Sbjct: 5   KVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDLASR 64

Query: 157 ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 209
            S CSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 65  HSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 116

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BLAST of CmaCh16G006120 vs. Swiss-Prot
Match: PIN1_RHIO9 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=pin1 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-25
Identity = 64/114 (56.14%), Postives = 81/114 (71.05%), Query Frame = 1


Query: 97  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVASR 156
           +VRASH+LIK + SRRP+SW++         ++E A+  LT  +  I SG+     +A+ 
Sbjct: 41  RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 100

Query: 157 ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRIA 211
            SDC+SAKRGGDLG F RGQMQKPFEEATFAL+VGE+S  V TDSGVH+I R A
Sbjct: 101 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150

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BLAST of CmaCh16G006120 vs. Swiss-Prot
Match: DOD_DROME (Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster GN=dod PE=2 SV=3)

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-25
Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = 1


Query: 94  AAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDV 153
           A  +V   H+L+KH+GSRRP+SW+  E  I +  T+E A   L V R+ I+  ++ F+++
Sbjct: 54  APDEVHCLHLLVKHKGSRRPSSWR--EANITR--TKEEAQLLLEVYRNKIVQQEATFDEL 113

Query: 154 ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRIA 211
           A   SDCSSAKRGGDLG FGRGQMQ  FE+A F L V ++S IVD+DSG+HII R A
Sbjct: 114 ARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLSGIVDSDSGLHIILRKA 166

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BLAST of CmaCh16G006120 vs. TrEMBL
Match: A0A0A0KZK7_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-55
Identity = 112/122 (91.80%), Postives = 119/122 (97.54%), Query Frame = 1


Query: 89  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 148
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 149 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 208
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 209 IA 211
            A
Sbjct: 121 TA 122

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BLAST of CmaCh16G006120 vs. TrEMBL
Match: A0A061DFC2_THECC (Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.4e-55
Identity = 126/173 (72.83%), Postives = 141/173 (81.50%), Query Frame = 1


Query: 53  QAAKIDSDRKRKKSASSISSADRT-AKEKRSSS----------------KKNKMSSSAAA 112
           +AAKIDSDRKRKK+  SISSADRT A EK+                   KK+KMSSS AA
Sbjct: 11  KAAKIDSDRKRKKA--SISSADRTEAAEKQKGKNPTSTSNHHHQSHHHRKKSKMSSSTAA 70

Query: 113 GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVAS 172
            QVRA+HILIKHQGSRR ASWKDPEGR+I NTTR++AVSQL  +RDDI+SGK+KF++VAS
Sbjct: 71  NQVRAAHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIVSGKAKFDEVAS 130

Query: 173 RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 209
           R SDCSSAKRGGDLGPFGRGQMQKPFE AT+ALKVGE+SDIVDTDSGVHII R
Sbjct: 131 RYSDCSSAKRGGDLGPFGRGQMQKPFENATYALKVGEISDIVDTDSGVHIIMR 181

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BLAST of CmaCh16G006120 vs. TrEMBL
Match: A0A0D2T5K4_GOSRA (Peptidylprolyl isomerase OS=Gossypium raimondii GN=B456_011G099300 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.4e-55
Identity = 127/173 (73.41%), Postives = 143/173 (82.66%), Query Frame = 1


Query: 51  VSQAAKIDSDRKRKKSASSISSADRTA-------KEKRSSS--------KKNKMSSSAAA 110
           VS+AAKIDSDRKRKKS  SISSADRTA       K+K  +S        KK+KMSSS+ A
Sbjct: 34  VSKAAKIDSDRKRKKS--SISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPA 93

Query: 111 GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVAS 170
            QVRASHILIKHQGSRR ASWKDPEGR+I NTTR++AVSQL  +RDDI SG +KF +VAS
Sbjct: 94  NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVAS 153

Query: 171 RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 209
           R SDCSSAKRGGDLGPFGRGQMQKPFE+AT++LK+GE+SDIVDTDSGVHII R
Sbjct: 154 RHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMR 204

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BLAST of CmaCh16G006120 vs. TrEMBL
Match: W9SN23_9ROSA (Peptidylprolyl isomerase OS=Morus notabilis GN=L484_026702 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.2e-54
Identity = 124/173 (71.68%), Postives = 144/173 (83.24%), Query Frame = 1


Query: 44  ARAAPPLVSQAAKIDS-DRKRKKSASSISSADRTAKEKRSSS----KKNKMSSSAAAG-Q 103
           + ++ P+ +Q   I+S DRKRKK   SIS+ADRT  ++R SS    KK KMSSS++   Q
Sbjct: 231 SHSSQPMSTQQTPIESSDRKRKKPPPSISAADRTKSKERGSSSSAKKKTKMSSSSSGNNQ 290

Query: 104 VRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVASRI 163
           VRASHILIKHQGSRR ASWKDPEGR+I NTTR++AVSQL  +RDDI+SGK+KF+ VASR 
Sbjct: 291 VRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKSLRDDIVSGKAKFDAVASRY 350

Query: 164 SDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRIA 211
           SDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDIVDTDSGVHII R A
Sbjct: 351 SDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIVDTDSGVHIIMRTA 403

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BLAST of CmaCh16G006120 vs. TrEMBL
Match: A0A059AHH1_EUCGR (Peptidylprolyl isomerase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J02408 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.7e-52
Identity = 125/182 (68.68%), Postives = 147/182 (80.77%), Query Frame = 1


Query: 38  IQVKEKARAAPPLVSQAAKIDS-DRKRKK-SASSISSADRTAKEKRSSSKKN----KMSS 97
           +Q  E +R   P    +AKI+S DRKRK+ S+S+ISSAD +A +  S   K+    KMSS
Sbjct: 6   LQRSEGSRTRSPSSPASAKIESADRKRKRPSSSTISSADPSAAKSGSLRDKHRAKAKMSS 65

Query: 98  SAAAG-----QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISG 157
           SAA       QVRASHILIKH+GSRR ASWKDPEGR+I++TTRESAVSQL  +R+DI++G
Sbjct: 66  SAAGAAAAGSQVRASHILIKHEGSRRKASWKDPEGRVIRSTTRESAVSQLKALREDIVAG 125

Query: 158 KSKFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHII 209
           K+KFED+ASR SDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDIVDTDSGVHII
Sbjct: 126 KAKFEDLASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIVDTDSGVHII 185

[Close]

BLAST of CmaCh16G006120 vs. TAIR10
Match: AT2G18040.1 (AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1)

HSP 1 Score: 191.8 bits (486), Expect = 4.2e-49
Identity = 94/118 (79.66%), Postives = 107/118 (90.68%), Query Frame = 1


Query: 93  AAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFED 152
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTRE+AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 153 VASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRIA 211
           VA+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKR A
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

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BLAST of CmaCh16G006120 vs. NCBI nr
Match: gi|659102324|ref|XP_008452069.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 1.5e-56
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 1


Query: 89  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 148
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 149 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 208
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 209 IA 211
            A
Sbjct: 121 TA 122

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BLAST of CmaCh16G006120 vs. NCBI nr
Match: gi|449457542|ref|XP_004146507.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 2.2e-55
Identity = 112/122 (91.80%), Postives = 119/122 (97.54%), Query Frame = 1


Query: 89  MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 148
           MSSSAA  QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIR+DIISGK+
Sbjct: 1   MSSSAATAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKA 60

Query: 149 KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 208
           KFED+A+RISDCSSAKRGGDLGPFGRGQMQKPFEEAT+ALKVGE+SDI+DTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKR 120

Query: 209 IA 211
            A
Sbjct: 121 TA 122

[Close]

BLAST of CmaCh16G006120 vs. NCBI nr
Match: gi|823241249|ref|XP_012453241.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase ssp-1-like [Gossypium raimondii])

HSP 1 Score: 222.6 bits (566), Expect = 6.3e-55
Identity = 127/173 (73.41%), Postives = 143/173 (82.66%), Query Frame = 1


Query: 51  VSQAAKIDSDRKRKKSASSISSADRTA-------KEKRSSS--------KKNKMSSSAAA 110
           VS+AAKIDSDRKRKKS  SISSADRTA       K+K  +S        KK+KMSSS+ A
Sbjct: 102 VSKAAKIDSDRKRKKS--SISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPA 161

Query: 111 GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVAS 170
            QVRASHILIKHQGSRR ASWKDPEGR+I NTTR++AVSQL  +RDDI SG +KF +VAS
Sbjct: 162 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVAS 221

Query: 171 RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 209
           R SDCSSAKRGGDLGPFGRGQMQKPFE+AT++LK+GE+SDIVDTDSGVHII R
Sbjct: 222 RHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMR 272

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BLAST of CmaCh16G006120 vs. NCBI nr
Match: gi|763804030|gb|KJB70968.1| (hypothetical protein B456_011G099300 [Gossypium raimondii])

HSP 1 Score: 222.6 bits (566), Expect = 6.3e-55
Identity = 127/173 (73.41%), Postives = 143/173 (82.66%), Query Frame = 1


Query: 51  VSQAAKIDSDRKRKKSASSISSADRTA-------KEKRSSS--------KKNKMSSSAAA 110
           VS+AAKIDSDRKRKKS  SISSADRTA       K+K  +S        KK+KMSSS+ A
Sbjct: 34  VSKAAKIDSDRKRKKS--SISSADRTAAKGGDQHKDKAPTSSTNHHHHKKKSKMSSSSPA 93

Query: 111 GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVAS 170
            QVRASHILIKHQGSRR ASWKDPEGR+I NTTR++AVSQL  +RDDI SG +KF +VAS
Sbjct: 94  NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVAS 153

Query: 171 RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 209
           R SDCSSAKRGGDLGPFGRGQMQKPFE+AT++LK+GE+SDIVDTDSGVHII R
Sbjct: 154 RHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMR 204

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BLAST of CmaCh16G006120 vs. NCBI nr
Match: gi|590702875|ref|XP_007046727.1| (Peptidylprolyl cis/trans isomerase [Theobroma cacao])

HSP 1 Score: 222.6 bits (566), Expect = 6.3e-55
Identity = 126/173 (72.83%), Postives = 141/173 (81.50%), Query Frame = 1


Query: 53  QAAKIDSDRKRKKSASSISSADRT-AKEKRSSS----------------KKNKMSSSAAA 112
           +AAKIDSDRKRKK+  SISSADRT A EK+                   KK+KMSSS AA
Sbjct: 11  KAAKIDSDRKRKKA--SISSADRTEAAEKQKGKNPTSTSNHHHQSHHHRKKSKMSSSTAA 70

Query: 113 GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKSKFEDVAS 172
            QVRA+HILIKHQGSRR ASWKDPEGR+I NTTR++AVSQL  +RDDI+SGK+KF++VAS
Sbjct: 71  NQVRAAHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIVSGKAKFDEVAS 130

Query: 173 RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 209
           R SDCSSAKRGGDLGPFGRGQMQKPFE AT+ALKVGE+SDIVDTDSGVHII R
Sbjct: 131 RYSDCSSAKRGGDLGPFGRGQMQKPFENATYALKVGEISDIVDTDSGVHIIMR 181

The following BLAST results are available for this feature:

BLAST of CmaCh16G006120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIN1_MALDO	3.3e-51	84.75	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1	[more]
PIN1_ARATH	7.5e-48	79.66	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV...	[more]
PIN1_DIGLA	3.3e-43	76.79	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV...	[more]
PIN1_RHIO9	3.1e-25	56.14	Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 /...	[more]
DOD_DROME	3.1e-25	52.99	Putative peptidyl-prolyl cis-trans isomerase dodo OS=Drosophila melanogaster GN=...	[more]

BLAST of CmaCh16G006120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZK7_CUCSA	1.5e-55	91.80	Peptidylprolyl isomerase OS=Cucumis sativus GN=Csa_4G046790 PE=4 SV=1	[more]
A0A061DFC2_THECC	4.4e-55	72.83	Peptidylprolyl isomerase OS=Theobroma cacao GN=TCM_000228 PE=4 SV=1	[more]
A0A0D2T5K4_GOSRA	4.4e-55	73.41	Peptidylprolyl isomerase OS=Gossypium raimondii GN=B456_011G099300 PE=4 SV=1	[more]
W9SN23_9ROSA	2.2e-54	71.68	Peptidylprolyl isomerase OS=Morus notabilis GN=L484_026702 PE=4 SV=1	[more]
A0A059AHH1_EUCGR	2.7e-52	68.68	Peptidylprolyl isomerase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J02408 PE=4...	[more]

BLAST of CmaCh16G006120 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18040.1	4.2e-49	79.66	peptidylprolyl cis/trans isomerase, NIMA-interacting 1	[more]

BLAST of CmaCh16G006120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102324\|ref\|XP_008452069.1\|	1.5e-56	94.26	PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo]	[more]
gi\|449457542\|ref\|XP_004146507.1\|	2.2e-55	91.80	PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis sativus]	[more]
gi\|823241249\|ref\|XP_012453241.1\|	6.3e-55	73.41	PREDICTED: peptidyl-prolyl cis-trans isomerase ssp-1-like [Gossypium raimondii]	[more]
gi\|763804030\|gb\|KJB70968.1\|	6.3e-55	73.41	hypothetical protein B456_011G099300 [Gossypium raimondii]	[more]
gi\|590702875\|ref\|XP_007046727.1\|	6.3e-55	72.83	Peptidylprolyl cis/trans isomerase [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000297	PPIase_PpiC
IPR023058	PPIase_PpiC_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016853	isomerase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0009853	photorespiration
biological_process	GO:0006833	water transport
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0009651	response to salt stress
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051726	regulation of cell cycle
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0016853	isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G006120.1	CmaCh16G006120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type	PFAM	PF00639	Rotamase	coord: 102..209 score: 3.8
IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type	PROFILE	PS50198	PPIC_PPIASE_2	coord: 95..210 score: 28
IPR023058	Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site	PROSITE	PS01096	PPIC_PPIASE_1	coord: 150..170 scor
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 97..209 score: 3.7
None	No IPR available	PANTHER	PTHR10657	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 81..209 score: 1.3
None	No IPR available	PANTHER	PTHR10657:SF4	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1	coord: 81..209 score: 1.3
None	No IPR available	unknown	SSF54534	FKBP-like	coord: 95..209 score: 1.31

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G006120	Cucsa.106590	Cucumber (Gy14) v1	cgycmaB0245
CmaCh16G006120	Cla014591	Watermelon (97103) v1	cmawmB307
CmaCh16G006120	Csa4G046790	Cucumber (Chinese Long) v2	cmacuB337
CmaCh16G006120	MELO3C016377	Melon (DHL92) v3.5.1	cmameB301
CmaCh16G006120	ClCG07G008440	Watermelon (Charleston Gray)	cmawcgB301
CmaCh16G006120	CSPI04G05560	Wild cucumber (PI 183967)	cmacpiB342
CmaCh16G006120	CmoCh04G008010	Cucurbita moschata (Rifu)	cmacmoB337
CmaCh16G006120	CmoCh16G006680	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G006120	Lsi07G002610	Bottle gourd (USVL1VR-Ls)	cmalsiB326
CmaCh16G006120	Cp4.1LG14g01860	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G006120	Cp4.1LG01g06740	Cucurbita pepo (Zucchini)	cmacpeB354
CmaCh16G006120	MELO3C016378.2	Melon (DHL92) v3.6.1	cmamedB350
CmaCh16G006120	CsaV3_4G005720	Cucumber (Chinese Long) v3	cmacucB0393
CmaCh16G006120	Cla97C07G135510	Watermelon (97103) v2	cmawmbB351
CmaCh16G006120	Bhi01G001840	Wax gourd	cmawgoB0441
CmaCh16G006120	CsGy4G005440	Cucumber (Gy14) v2	cgybcmaB498
CmaCh16G006120	Carg05735	Silver-seed gourd	carcmaB1409
CmaCh16G006120	Carg14150	Silver-seed gourd	carcmaB1286

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G006120	CmaCh04G007520	Cucurbita maxima (Rimu)	cmacmaB350

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G006120	Watermelon (97103) v2	cmawmbB327
CmaCh16G006120	Wax gourd	cmawgoB0432
CmaCh16G006120	Cucurbita maxima (Rimu)	cmacmaB349
CmaCh16G006120	Cucurbita moschata (Rifu)	cmacmoB336
CmaCh16G006120	Wild cucumber (PI 183967)	cmacpiB349
CmaCh16G006120	Cucumber (Chinese Long) v2	cmacuB345
CmaCh16G006120	Melon (DHL92) v3.5.1	cmameB310
CmaCh16G006120	Watermelon (Charleston Gray)	cmawcgB291
CmaCh16G006120	Watermelon (97103) v1	cmawmB321
CmaCh16G006120	Cucurbita pepo (Zucchini)	cmacpeB350
CmaCh16G006120	Bottle gourd (USVL1VR-Ls)	cmalsiB305
CmaCh16G006120	Cucumber (Gy14) v2	cgybcmaB748
CmaCh16G006120	Melon (DHL92) v3.6.1	cmamedB361
CmaCh16G006120	Silver-seed gourd	carcmaB0561
CmaCh16G006120	Cucumber (Chinese Long) v3	cmacucB0410