Cp4.1LG01g02110 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g02110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMaternal effect embryo arrest 9
LocationCp4.1LG01 : 2688420 .. 2688863 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCATGGAGCTCCAACACCAGAACGAGGTTCGAGACGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGATTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCAGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCATGGAGCTCCAACACCAGAACGAGGTTCGAGACGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGATTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCAGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCATGGAGCTCCAACACCAGAACGAGGTTCGAGACGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGATTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCAGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Protein sequence

MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
BLAST of Cp4.1LG01g02110 vs. TrEMBL
Match: A0A0A0LAB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.5e-65
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNEV+DAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ L+DKSEKARKMG LMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Cp4.1LG01g02110 vs. TrEMBL
Match: A0A061DZ26_THECC (Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.9e-53
Identity = 112/147 (76.19%), Postives = 131/147 (89.12%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEAL+SQFTFLSD+ALQDKNFDPSTIEDLMKLFEIE+Y +WAAMEL+ + EV++AE  MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +R ++AEL  L + +E+ARKMG LMEK A +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of Cp4.1LG01g02110 vs. TrEMBL
Match: A0A0D2Q5V4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.9e-53
Identity = 112/147 (76.19%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEAL+S+FTFLSD+ALQDKNFDPS IEDLMKLFEIE+Y +WAAMEL+ + EV++AE +MQ
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSNIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           QAE YLDSVME AMDEFRR EEE +RMA+AEL+DL D ++KARKMG LMEKAAA+ASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

BLAST of Cp4.1LG01g02110 vs. TrEMBL
Match: A0A067KV72_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05035 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.9e-52
Identity = 112/147 (76.19%), Postives = 129/147 (87.76%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEAL+S FT LSD+ALQDKNFDPS IEDLMKLFEIEAY SWAAMEL+ + EV +AEIAM 
Sbjct: 1   MEALLSHFTLLSDQALQDKNFDPSAIEDLMKLFEIEAYKSWAAMELEQEKEVEEAEIAMN 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEE +RMA+AEL  L   ++ ARK+G+LMEKAA +ASKRY
Sbjct: 61  KAEDYLDSVMESAMDEFRRFEEEMERMAKAELDSLEQTADNARKVGKLMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISSNK+HPS
Sbjct: 121 IEAAVNSATASMKSAWKGISSNKIHPS 147

BLAST of Cp4.1LG01g02110 vs. TrEMBL
Match: A0A0L9VGM3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g271600 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.0e-51
Identity = 108/147 (73.47%), Postives = 130/147 (88.44%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEAL+SQFTFLS++ALQDKNFDPSTIEDLMKLFEIE+Y +WAA EL+   EV +AE  MQ
Sbjct: 1   MEALLSQFTFLSEQALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQDREVEEAEAGMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           +AE+YLDSVME AMDEFRRFEEE +RMA+ E+++LV  +E+ARKMG LMEK A+VASK+Y
Sbjct: 61  EAEEYLDSVMETAMDEFRRFEEELERMAKDEMENLVQTAERARKMGNLMEKGASVASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSSGKVHPS 147

BLAST of Cp4.1LG01g02110 vs. TAIR10
Match: AT1G60870.1 (AT1G60870.1 maternal effect embryo arrest 9)

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-39
Identity = 87/147 (59.18%), Postives = 113/147 (76.87%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEALI  FT LSD+AL DK FDPS IEDLM+LFE+++Y +WAA+E + Q E+ +AE +++
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           +AE  LD  ME  M+E+RR  EE +RM  AEL++L +K+E AR+ G LMEKAA VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

BLAST of Cp4.1LG01g02110 vs. NCBI nr
Match: gi|449464480|ref|XP_004149957.1| (PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 2.1e-65
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNEV+DAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ L+DKSEKARKMG LMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Cp4.1LG01g02110 vs. NCBI nr
Match: gi|1009150402|ref|XP_015893000.1| (PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba])

HSP 1 Score: 223.8 bits (569), Expect = 2.0e-55
Identity = 115/147 (78.23%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           ME+L+SQFT LS+ ALQDKNFDPST+EDLMKLFEIEAY SWAAMELQHQNEV++AE+AMQ
Sbjct: 1   MESLLSQFTILSNEALQDKNFDPSTVEDLMKLFEIEAYKSWAAMELQHQNEVKEAEVAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +RMA+ EL  LV+ +E AR+MG  MEKAA +ASKRY
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERMAKTELNSLVETAEGARRMGNFMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +S+NKVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSTNKVHPS 147

BLAST of Cp4.1LG01g02110 vs. NCBI nr
Match: gi|590683028|ref|XP_007041500.1| (Maternal effect embryo arrest 9 [Theobroma cacao])

HSP 1 Score: 216.1 bits (549), Expect = 4.2e-53
Identity = 112/147 (76.19%), Postives = 131/147 (89.12%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEAL+SQFTFLSD+ALQDKNFDPSTIEDLMKLFEIE+Y +WAAMEL+ + EV++AE  MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +R ++AEL  L + +E+ARKMG LMEK A +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of Cp4.1LG01g02110 vs. NCBI nr
Match: gi|823129596|ref|XP_012449287.1| (PREDICTED: uncharacterized protein LOC105772529 [Gossypium raimondii])

HSP 1 Score: 215.3 bits (547), Expect = 7.1e-53
Identity = 112/147 (76.19%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEAL+S+FTFLSD+ALQDKNFDPS IEDLMKLFEIE+Y +WAAMEL+ + EV++AE +MQ
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSNIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           QAE YLDSVME AMDEFRR EEE +RMA+AEL+DL D ++KARKMG LMEKAAA+ASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

BLAST of Cp4.1LG01g02110 vs. NCBI nr
Match: gi|1021581615|ref|XP_016180185.1| (PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis])

HSP 1 Score: 215.3 bits (547), Expect = 7.1e-53
Identity = 111/147 (75.51%), Postives = 132/147 (89.80%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 60
           MEAL+SQFT LSD ALQDKNFDPSTIEDLMKLFEIE+Y +WAA EL+ Q EV +AE++MQ
Sbjct: 1   MEALLSQFTLLSDHALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQQTEVEEAEVSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEEF+ M++AE++ LV+ +E ARKMG LMEKAA++ASK+Y
Sbjct: 61  EAEDYLDSVMESAMDEFRRFEEEFESMSKAEMESLVNTAESARKMGNLMEKAASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGISSGKVHPS 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAB6_CUCSA1.5e-6593.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1[more]
A0A061DZ26_THECC2.9e-5376.19Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1[more]
A0A0D2Q5V4_GOSRA4.9e-5376.19Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1[more]
A0A067KV72_JATCU1.9e-5276.19Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05035 PE=4 SV=1[more]
A0A0L9VGM3_PHAAN6.0e-5173.47Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g271600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G60870.12.1e-3959.18 maternal effect embryo arrest 9[more]
Match NameE-valueIdentityDescription
gi|449464480|ref|XP_004149957.1|2.1e-6593.88PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus][more]
gi|1009150402|ref|XP_015893000.1|2.0e-5578.23PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba][more]
gi|590683028|ref|XP_007041500.1|4.2e-5376.19Maternal effect embryo arrest 9 [Theobroma cacao][more]
gi|823129596|ref|XP_012449287.1|7.1e-5376.19PREDICTED: uncharacterized protein LOC105772529 [Gossypium raimondii][more]
gi|1021581615|ref|XP_016180185.1|7.1e-5375.51PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009555 pollen development
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003824 catalytic activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g02110.1Cp4.1LG01g02110.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 52..90
scor
NoneNo IPR availablePANTHERPTHR37707FAMILY NOT NAMEDcoord: 2..147
score: 2.7

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g02110Cp4.1LG14g04090Cucurbita pepo (Zucchini)cpecpeB234
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g02110Cucumber (Gy14) v1cgycpeB0007
Cp4.1LG01g02110Cucurbita moschata (Rifu)cmocpeB311
Cp4.1LG01g02110Wild cucumber (PI 183967)cpecpiB388
Cp4.1LG01g02110Cucumber (Chinese Long) v2cpecuB389
Cp4.1LG01g02110Cucumber (Gy14) v2cgybcpeB362
Cp4.1LG01g02110Cucumber (Gy14) v2cgybcpeB372
Cp4.1LG01g02110Cucumber (Chinese Long) v3cpecucB0484