Cp4.1LG14g04090 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG14g04090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMaternal effect embryo arrest 9
LocationCp4.1LG14 : 1832041 .. 1832484 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCTCATCTCGCAGTTCACCTTCCTCTCCGATCAAGCTCTACACGACAAGAATTTCGATCCCTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCTTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCCATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTTGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCGTGA

mRNA sequence

ATGGAAGCTCTCATCTCGCAGTTCACCTTCCTCTCCGATCAAGCTCTACACGACAAGAATTTCGATCCCTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCTTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCCATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTTGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCGTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCGCAGTTCACCTTCCTCTCCGATCAAGCTCTACACGACAAGAATTTCGATCCCTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCTTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCCATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTTGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCGTGA

Protein sequence

MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
BLAST of Cp4.1LG14g04090 vs. TrEMBL
Match: A0A0A0LAB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-65
Identity = 140/147 (95.24%), Postives = 144/147 (97.96%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Cp4.1LG14g04090 vs. TrEMBL
Match: A0A061DZ26_THECC (Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.3e-52
Identity = 112/147 (76.19%), Postives = 130/147 (88.44%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLSDQAL DKNFDPSTIEDLMKLFEIE+YK+WAA EL+ + E +EAE  MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +R ++AEL  L + +E+ARKMG+LMEK A +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of Cp4.1LG14g04090 vs. TrEMBL
Match: A0A0D2Q5V4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.5e-51
Identity = 111/147 (75.51%), Postives = 132/147 (89.80%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+S+FTFLSDQAL DKNFDPS IEDLMKLFEIE+YK+WAA EL+ + E +EAE +MQ
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSNIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           QAE YLDSVME AMDEFRR EEE +RMA+AEL++L D ++KARKMG+LMEKAAA+ASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

BLAST of Cp4.1LG14g04090 vs. TrEMBL
Match: A0A067KV72_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05035 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-51
Identity = 112/147 (76.19%), Postives = 127/147 (86.39%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+S FT LSDQAL DKNFDPS IEDLMKLFEIEAYKSWAA EL+ + E +EAEIAM 
Sbjct: 1   MEALLSHFTLLSDQALQDKNFDPSAIEDLMKLFEIEAYKSWAAMELEQEKEVEEAEIAMN 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEE +RMA+AEL  L   ++ ARK+G LMEKAA +ASKRY
Sbjct: 61  KAEDYLDSVMESAMDEFRRFEEEMERMAKAELDSLEQTADNARKVGKLMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISSNK+HPS
Sbjct: 121 IEAAVNSATASMKSAWKGISSNKIHPS 147

BLAST of Cp4.1LG14g04090 vs. TrEMBL
Match: A0A0L9VGM3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g271600 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.0e-50
Identity = 109/147 (74.15%), Postives = 131/147 (89.12%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLS+QAL DKNFDPSTIEDLMKLFEIE+YK+WAA+EL+   E +EAE  MQ
Sbjct: 1   MEALLSQFTFLSEQALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQDREVEEAEAGMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE+YLDSVME AMDEFRRFEEE +RMA+ E++ LV  +E+ARKMG+LMEK A+VASK+Y
Sbjct: 61  EAEEYLDSVMETAMDEFRRFEEELERMAKDEMENLVQTAERARKMGNLMEKGASVASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSSGKVHPS 147

BLAST of Cp4.1LG14g04090 vs. TAIR10
Match: AT1G60870.1 (AT1G60870.1 maternal effect embryo arrest 9)

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-39
Identity = 91/147 (61.90%), Postives = 114/147 (77.55%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALI  FT LSDQAL DK FDPS IEDLM+LFE+++YK+WAA E + Q E +EAE +++
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE  LD  ME  M+E+RR  EE +RM  AEL+EL +K+E AR+ G+LMEKAA VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

BLAST of Cp4.1LG14g04090 vs. NCBI nr
Match: gi|449464480|ref|XP_004149957.1| (PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 2.8e-65
Identity = 140/147 (95.24%), Postives = 144/147 (97.96%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Cp4.1LG14g04090 vs. NCBI nr
Match: gi|1009150402|ref|XP_015893000.1| (PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba])

HSP 1 Score: 214.9 bits (546), Expect = 9.2e-53
Identity = 113/147 (76.87%), Postives = 132/147 (89.80%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           ME+L+SQFT LS++AL DKNFDPST+EDLMKLFEIEAYKSWAA ELQ QNE +EAE+AMQ
Sbjct: 1   MESLLSQFTILSNEALQDKNFDPSTVEDLMKLFEIEAYKSWAAMELQHQNEVKEAEVAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +RMA+ EL  LV+ +E AR+MG+ MEKAA +ASKRY
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERMAKTELNSLVETAEGARRMGNFMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +S+NKVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSTNKVHPS 147

BLAST of Cp4.1LG14g04090 vs. NCBI nr
Match: gi|1021581615|ref|XP_016180185.1| (PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis])

HSP 1 Score: 213.4 bits (542), Expect = 2.7e-52
Identity = 111/147 (75.51%), Postives = 134/147 (91.16%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFT LSD AL DKNFDPSTIEDLMKLFEIE+YK+WAA+EL+ Q E +EAE++MQ
Sbjct: 1   MEALLSQFTLLSDHALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQQTEVEEAEVSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEEF+ M++AE++ LV+ +E ARKMG+LMEKAA++ASK+Y
Sbjct: 61  EAEDYLDSVMESAMDEFRRFEEEFESMSKAEMESLVNTAESARKMGNLMEKAASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGISSGKVHPS 147

BLAST of Cp4.1LG14g04090 vs. NCBI nr
Match: gi|590683028|ref|XP_007041500.1| (Maternal effect embryo arrest 9 [Theobroma cacao])

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-51
Identity = 112/147 (76.19%), Postives = 130/147 (88.44%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLSDQAL DKNFDPSTIEDLMKLFEIE+YK+WAA EL+ + E +EAE  MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +R ++AEL  L + +E+ARKMG+LMEK A +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of Cp4.1LG14g04090 vs. NCBI nr
Match: gi|1012251162|ref|XP_015943646.1| (PREDICTED: uncharacterized protein LOC107468801 [Arachis duranensis])

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-51
Identity = 110/147 (74.83%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFT LSD AL DKNFDPSTIEDLMKLFEIE+YK+WAA+EL+ Q E +EAE++MQ
Sbjct: 1   MEALLSQFTLLSDHALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQQKEVEEAEVSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEE + M++AE++ LV+ +E ARKMG+LMEKAA++ASK+Y
Sbjct: 61  EAEDYLDSVMESAMDEFRRFEEELESMSKAEMESLVNTAESARKMGNLMEKAASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGISSGKVHPS 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAB6_CUCSA1.9e-6595.24Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1[more]
A0A061DZ26_THECC9.3e-5276.19Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1[more]
A0A0D2Q5V4_GOSRA3.5e-5175.51Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1[more]
A0A067KV72_JATCU4.6e-5176.19Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05035 PE=4 SV=1[more]
A0A0L9VGM3_PHAAN1.0e-5074.15Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g271600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G60870.11.2e-3961.90 maternal effect embryo arrest 9[more]
Match NameE-valueIdentityDescription
gi|449464480|ref|XP_004149957.1|2.8e-6595.24PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus][more]
gi|1009150402|ref|XP_015893000.1|9.2e-5376.87PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba][more]
gi|1021581615|ref|XP_016180185.1|2.7e-5275.51PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis][more]
gi|590683028|ref|XP_007041500.1|1.3e-5176.19Maternal effect embryo arrest 9 [Theobroma cacao][more]
gi|1012251162|ref|XP_015943646.1|1.3e-5174.83PREDICTED: uncharacterized protein LOC107468801 [Arachis duranensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009555 pollen development
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003824 catalytic activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g04090.1Cp4.1LG14g04090.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 43..90
scor
NoneNo IPR availablePANTHERPTHR37707FAMILY NOT NAMEDcoord: 2..147
score: 2.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g04090Cp4.1LG01g02110Cucurbita pepo (Zucchini)cpecpeB234
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g04090Cucumber (Gy14) v1cgycpeB0005
Cp4.1LG14g04090Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g04090Wild cucumber (PI 183967)cpecpiB208
Cp4.1LG14g04090Cucumber (Chinese Long) v2cpecuB205
Cp4.1LG14g04090Bottle gourd (USVL1VR-Ls)cpelsiB171
Cp4.1LG14g04090Melon (DHL92) v3.5.1cpemeB192
Cp4.1LG14g04090Cucumber (Gy14) v2cgybcpeB317
Cp4.1LG14g04090Melon (DHL92) v3.6.1cpemedB234
Cp4.1LG14g04090Silver-seed gourdcarcpeB0926
Cp4.1LG14g04090Cucumber (Chinese Long) v3cpecucB0247