Carg26425 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGTTGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGTTGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGTTGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
BLAST of Carg26425 vs. NCBI nr
Match: XP_022942791.1 (uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 uncharacterized protein LOC111447720 [Cucurbita moschata]) HSP 1 Score: 267.3 bits (682), Expect = 3.1e-68 Identity = 143/147 (97.28%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Carg26425 vs. NCBI nr
Match: XP_022982937.1 (uncharacterized protein LOC111481629 isoform X1 [Cucurbita maxima] >XP_022982945.1 uncharacterized protein LOC111481629 isoform X2 [Cucurbita maxima]) HSP 1 Score: 263.1 bits (671), Expect = 5.8e-67 Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0
BLAST of Carg26425 vs. NCBI nr
Match: XP_023533822.1 (uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 263.1 bits (671), Expect = 5.8e-67 Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0
BLAST of Carg26425 vs. NCBI nr
Match: XP_023533813.1 (uncharacterized protein LOC111795549 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 254.6 bits (649), Expect = 2.0e-64 Identity = 137/143 (95.80%), Postives = 141/143 (98.60%), Query Frame = 0
BLAST of Carg26425 vs. NCBI nr
Match: XP_004149957.1 (PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hypothetical protein Csa_3G214020 [Cucumis sativus]) HSP 1 Score: 253.1 bits (645), Expect = 6.0e-64 Identity = 135/147 (91.84%), Postives = 143/147 (97.28%), Query Frame = 0
BLAST of Carg26425 vs. TAIR10
Match: AT1G60870.1 (maternal effect embryo arrest 9) HSP 1 Score: 132.1 bits (331), Expect = 2.8e-31 Identity = 77/147 (52.38%), Postives = 98/147 (66.67%), Query Frame = 0
BLAST of Carg26425 vs. TrEMBL
Match: tr|A0A0A0LAB6|A0A0A0LAB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.9e-64 Identity = 135/147 (91.84%), Postives = 143/147 (97.28%), Query Frame = 0
BLAST of Carg26425 vs. TrEMBL
Match: tr|A0A1R3JBG5|A0A1R3JBG5_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17867 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.8e-53 Identity = 112/147 (76.19%), Postives = 134/147 (91.16%), Query Frame = 0
BLAST of Carg26425 vs. TrEMBL
Match: tr|A0A1R3HYC2|A0A1R3HYC2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16194 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51 Identity = 109/143 (76.22%), Postives = 131/143 (91.61%), Query Frame = 0
BLAST of Carg26425 vs. TrEMBL
Match: tr|A0A1U8MMD7|A0A1U8MMD7_GOSHI (uncharacterized protein LOC107936949 OS=Gossypium hirsutum OX=3635 GN=LOC107939215 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.9e-51 Identity = 108/147 (73.47%), Postives = 134/147 (91.16%), Query Frame = 0
BLAST of Carg26425 vs. TrEMBL
Match: tr|A0A2P5WGC0|A0A2P5WGC0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA30527 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.9e-51 Identity = 108/147 (73.47%), Postives = 134/147 (91.16%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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