Carg11303 (gene) Silver-seed gourd

NameCarg11303
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMaternal effect embryo arrest
LocationCucurbita_argyrosperma_scaffold_025 : 124859 .. 125302 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACGCGACAAGAATTTCGATCCCTCCACCATTGAAGACCTTATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGAAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCCTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACGCGACAAGAATTTCGATCCCTCCACCATTGAAGACCTTATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGAAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCCTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACGCGACAAGAATTTCGATCCCTCCACCATTGAAGACCTTATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGAAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCCTGA

Protein sequence

MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQKAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
BLAST of Carg11303 vs. NCBI nr
Match: XP_022922756.1 (uncharacterized protein LOC111430656 [Cucurbita moschata])

HSP 1 Score: 266.9 bits (681), Expect = 4.0e-68
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Carg11303 vs. NCBI nr
Match: XP_023551868.1 (uncharacterized protein LOC111809710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.5 bits (672), Expect = 4.4e-67
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Carg11303 vs. NCBI nr
Match: XP_022985079.1 (uncharacterized protein LOC111483158 [Cucurbita maxima])

HSP 1 Score: 261.5 bits (667), Expect = 1.7e-66
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAE ELQELVDKSEKARKMGSLMEKAAA+ASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Carg11303 vs. NCBI nr
Match: XP_004149957.1 (PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hypothetical protein Csa_3G214020 [Cucumis sativus])

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Carg11303 vs. NCBI nr
Match: XP_022942791.1 (uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 uncharacterized protein LOC111447720 [Cucurbita moschata])

HSP 1 Score: 249.6 bits (636), Expect = 6.6e-63
Identity = 136/147 (92.52%), Postives = 143/147 (97.28%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSD+AL+DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAMQ
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Carg11303 vs. TAIR10
Match: AT1G60870.1 (maternal effect embryo arrest 9)

HSP 1 Score: 132.1 bits (331), Expect = 2.8e-31
Identity = 80/147 (54.42%), Postives = 99/147 (67.35%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALI  FT LSDQAL DK FDPS IEDLM+LFE+++YK+WAA E + Q E +EAE +++
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE  LD  ME  M+E+RR  EE                    + G+LMEKAA VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEXXXXXXXXXXXXXXXXXXXXRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

BLAST of Carg11303 vs. TrEMBL
Match: tr|A0A0A0LAB6|A0A0A0LAB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.7e-64
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of Carg11303 vs. TrEMBL
Match: tr|A0A1R3JBG5|A0A1R3JBG5_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17867 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 8.2e-54
Identity = 116/147 (78.91%), Postives = 134/147 (91.16%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLSDQAL+DKNFDPSTIEDLMKLFEIE+YK+WAA EL+ +NE +EAEI MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQENEVKEAEITMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEE DRMA+ EL  L  K+E+ARKMG+LMEKAA +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMDRMAKDELDGLEQKAERARKMGNLMEKAATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 IEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of Carg11303 vs. TrEMBL
Match: tr|A0A1R3HYC2|A0A1R3HYC2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16194 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.9e-52
Identity = 113/143 (79.02%), Postives = 131/143 (91.61%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLSDQAL+DKNFDPSTIEDLMKLFEIE+YK+WAA EL+ +NE +EAEI MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQENEVKEAEITMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEE DRMA+AEL  L  K+E+ARKMG+LMEKAA +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMDRMAKAELDGLEQKAERARKMGNLMEKAATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNK 144
           +EAA+NSATASM+SAWK +SSNK
Sbjct: 121 IEAAVNSATASMKSAWKGLSSNK 143

BLAST of Carg11303 vs. TrEMBL
Match: tr|A0A067KV72|A0A067KV72_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05035 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-51
Identity = 113/147 (76.87%), Postives = 128/147 (87.07%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+S FT LSDQAL+DKNFDPS IEDLMKLFEIEAYKSWAA EL+ + E +EAEIAM 
Sbjct: 1   MEALLSHFTLLSDQALQDKNFDPSAIEDLMKLFEIEAYKSWAAMELEQEKEVEEAEIAMN 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           KAEDYLDSVME AMDEFRRFEEE +RMA+AEL  L   ++ ARK+G LMEKAA +ASKRY
Sbjct: 61  KAEDYLDSVMESAMDEFRRFEEEMERMAKAELDSLEQTADNARKVGKLMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISSNK+HPS
Sbjct: 121 IEAAVNSATASMKSAWKGISSNKIHPS 147

BLAST of Carg11303 vs. TrEMBL
Match: tr|A0A1U8MMD7|A0A1U8MMD7_GOSHI (uncharacterized protein LOC107936949 OS=Gossypium hirsutum OX=3635 GN=LOC107939215 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.9e-51
Identity = 111/147 (75.51%), Postives = 134/147 (91.16%), Query Frame = 0

Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+S+FTFLSDQAL+DKNFDPSTIEDLMKLFEIE+YK+WAA EL+ + E +EAE +MQ
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE YLDSVME AMDEFRR EEE +RMA+AEL++L D ++KARKMG+LMEKAAA+ASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022922756.14.0e-68100.00uncharacterized protein LOC111430656 [Cucurbita moschata][more]
XP_023551868.14.4e-6798.64uncharacterized protein LOC111809710 [Cucurbita pepo subsp. pepo][more]
XP_022985079.11.7e-6697.28uncharacterized protein LOC111483158 [Cucurbita maxima][more]
XP_004149957.11.0e-6393.88PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hy... [more]
XP_022942791.16.6e-6392.52uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 unchar... [more]
Match NameE-valueIdentityDescription
AT1G60870.12.8e-3154.42maternal effect embryo arrest 9[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LAB6|A0A0A0LAB6_CUCSA6.7e-6493.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1[more]
tr|A0A1R3JBG5|A0A1R3JBG5_9ROSI8.2e-5478.91Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17867 PE=4 SV=1[more]
tr|A0A1R3HYC2|A0A1R3HYC2_COCAP5.9e-5279.02Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16194 PE=4 ... [more]
tr|A0A067KV72|A0A067KV72_JATCU1.7e-5176.87Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05035 PE=4 SV=1[more]
tr|A0A1U8MMD7|A0A1U8MMD7_GOSHI2.9e-5175.51uncharacterized protein LOC107936949 OS=Gossypium hirsutum OX=3635 GN=LOC1079392... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11303-RACarg11303-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..90
NoneNo IPR availablePANTHERPTHR37707FAMILY NOT NAMEDcoord: 1..147