CmoCh04G005570 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G005570
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMaternal effect embryo arrest 9
LocationCmo_Chr04 : 2751848 .. 2752291 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCATCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCATCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCATCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA
BLAST of CmoCh04G005570 vs. TrEMBL
Match: A0A0A0LAB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 5.1e-66
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of CmoCh04G005570 vs. TrEMBL
Match: A0A061DZ26_THECC (Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-52
Identity = 110/147 (74.83%), Postives = 131/147 (89.12%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEAL+SQFTFLSD+ALQDKNFDPSTIEDLMKLFEIE+Y +WAA+EL+ + E ++AE  MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +R ++AEL  L + +E+ARKMG+LMEK A +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of CmoCh04G005570 vs. TrEMBL
Match: A0A0D2Q5V4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-52
Identity = 110/147 (74.83%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEAL+S+FTFLSD+ALQDKNFDPS IEDLMKLFEIE+Y +WAA+EL+ + E ++AE +MQ
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSNIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           QAE YLDSVME AMDEFRR EEE +RMA+AEL+DL D ++KARKMG+LMEKAAA+ASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

BLAST of CmoCh04G005570 vs. TrEMBL
Match: A0A067KV72_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05035 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-51
Identity = 110/147 (74.83%), Postives = 127/147 (86.39%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEAL+S FT LSD+ALQDKNFDPS IEDLMKLFEIEAY SWAA+EL+ + E  +AEIAM 
Sbjct: 1   MEALLSHFTLLSDQALQDKNFDPSAIEDLMKLFEIEAYKSWAAMELEQEKEVEEAEIAMN 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEE +RMA+AEL  L   ++ ARK+G LMEKAA +ASKRY
Sbjct: 61  KAEDYLDSVMESAMDEFRRFEEEMERMAKAELDSLEQTADNARKVGKLMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISSNK+HPS
Sbjct: 121 IEAAVNSATASMKSAWKGISSNKIHPS 147

BLAST of CmoCh04G005570 vs. TrEMBL
Match: A0A0L9VGM3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g271600 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-50
Identity = 106/147 (72.11%), Postives = 130/147 (88.44%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEAL+SQFTFLS++ALQDKNFDPSTIEDLMKLFEIE+Y +WAA EL+   E  +AE  MQ
Sbjct: 1   MEALLSQFTFLSEQALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQDREVEEAEAGMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           +AE+YLDSVME AMDEFRRFEEE +RMA+ E+++L+  +E+ARKMG+LMEK A+VASK+Y
Sbjct: 61  EAEEYLDSVMETAMDEFRRFEEELERMAKDEMENLVQTAERARKMGNLMEKGASVASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSSGKVHPS 147

BLAST of CmoCh04G005570 vs. TAIR10
Match: AT1G60870.1 (AT1G60870.1 maternal effect embryo arrest 9)

HSP 1 Score: 159.5 bits (402), Expect = 1.6e-39
Identity = 88/147 (59.86%), Postives = 113/147 (76.87%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALI  FT LSD+AL DK FDPS IEDLM+LFE+++Y +WAALE + Q E  +AE +++
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           +AE  LD  ME  M+E+RR  EE +RM  AEL++L +K+E AR+ G+LMEKAA VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

BLAST of CmoCh04G005570 vs. NCBI nr
Match: gi|449464480|ref|XP_004149957.1| (PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 7.3e-66
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of CmoCh04G005570 vs. NCBI nr
Match: gi|1009150402|ref|XP_015893000.1| (PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba])

HSP 1 Score: 221.5 bits (563), Expect = 9.9e-55
Identity = 112/147 (76.19%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           ME+L+SQFT LS+ ALQDKNFDPST+EDLMKLFEIEAY SWAA+ELQHQNE ++AE+AMQ
Sbjct: 1   MESLLSQFTILSNEALQDKNFDPSTVEDLMKLFEIEAYKSWAAMELQHQNEVKEAEVAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +RMA+ EL  L++ +E AR+MG+ MEKAA +ASKRY
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERMAKTELNSLVETAEGARRMGNFMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +S+NKVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSTNKVHPS 147

BLAST of CmoCh04G005570 vs. NCBI nr
Match: gi|1021581615|ref|XP_016180185.1| (PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis])

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52
Identity = 109/147 (74.15%), Postives = 132/147 (89.80%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEAL+SQFT LSD ALQDKNFDPSTIEDLMKLFEIE+Y +WAA EL+ Q E  +AE++MQ
Sbjct: 1   MEALLSQFTLLSDHALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQQTEVEEAEVSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME AMDEFRRFEEEF+ M++AE++ L++ +E ARKMG+LMEKAA++ASK+Y
Sbjct: 61  EAEDYLDSVMESAMDEFRRFEEEFESMSKAEMESLVNTAESARKMGNLMEKAASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGISSGKVHPS 147

BLAST of CmoCh04G005570 vs. NCBI nr
Match: gi|590683028|ref|XP_007041500.1| (Maternal effect embryo arrest 9 [Theobroma cacao])

HSP 1 Score: 213.8 bits (543), Expect = 2.1e-52
Identity = 110/147 (74.83%), Postives = 131/147 (89.12%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEAL+SQFTFLSD+ALQDKNFDPSTIEDLMKLFEIE+Y +WAA+EL+ + E ++AE  MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +R ++AEL  L + +E+ARKMG+LMEK A +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of CmoCh04G005570 vs. NCBI nr
Match: gi|823129596|ref|XP_012449287.1| (PREDICTED: uncharacterized protein LOC105772529 [Gossypium raimondii])

HSP 1 Score: 213.0 bits (541), Expect = 3.5e-52
Identity = 110/147 (74.83%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEAL+S+FTFLSD+ALQDKNFDPS IEDLMKLFEIE+Y +WAA+EL+ + E ++AE +MQ
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSNIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120
           QAE YLDSVME AMDEFRR EEE +RMA+AEL+DL D ++KARKMG+LMEKAAA+ASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAB6_CUCSA5.1e-6693.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1[more]
A0A061DZ26_THECC1.4e-5274.83Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1[more]
A0A0D2Q5V4_GOSRA2.4e-5274.83Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1[more]
A0A067KV72_JATCU2.1e-5174.83Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05035 PE=4 SV=1[more]
A0A0L9VGM3_PHAAN1.3e-5072.11Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g271600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G60870.11.6e-3959.86 maternal effect embryo arrest 9[more]
Match NameE-valueIdentityDescription
gi|449464480|ref|XP_004149957.1|7.3e-6693.88PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus][more]
gi|1009150402|ref|XP_015893000.1|9.9e-5576.19PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba][more]
gi|1021581615|ref|XP_016180185.1|1.6e-5274.15PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis][more]
gi|590683028|ref|XP_007041500.1|2.1e-5274.83Maternal effect embryo arrest 9 [Theobroma cacao][more]
gi|823129596|ref|XP_012449287.1|3.5e-5274.83PREDICTED: uncharacterized protein LOC105772529 [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009555 pollen development
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003824 catalytic activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G005570.1CmoCh04G005570.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 70..90
scor
NoneNo IPR availablePANTHERPTHR37707FAMILY NOT NAMEDcoord: 2..147
score: 4.7
NoneNo IPR availablePANTHERPTHR37707:SF1MATERNAL EFFECT EMBRYO ARREST 9 PROTEINcoord: 2..147
score: 4.7

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G005570Cucurbita moschata (Rifu)cmocmoB286
CmoCh04G005570Cucumber (Gy14) v1cgycmoB0012
CmoCh04G005570Wild cucumber (PI 183967)cmocpiB698
CmoCh04G005570Cucumber (Chinese Long) v2cmocuB687
CmoCh04G005570Cucumber (Gy14) v2cgybcmoB386
CmoCh04G005570Cucumber (Gy14) v2cgybcmoB396
CmoCh04G005570Cucumber (Chinese Long) v3cmocucB0814