CmaCh16G003770 (gene) Cucurbita maxima (Rimu)

NameCmaCh16G003770
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMaternal effect embryo arrest 9
LocationCma_Chr16 : 1789068 .. 1789511 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACACGACAAGAATTTCGATCCCTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCCATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAACCGAGCTCCAGGAACTCGTTGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCCGCGGCGATTGCTTCCAAAAGGTACATGGAGGCGGCCATGAACTCCGCCACCGCTTCCATGAGATCTGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCGTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACACGACAAGAATTTCGATCCCTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCCATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAACCGAGCTCCAGGAACTCGTTGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCCGCGGCGATTGCTTCCAAAAGGTACATGGAGGCGGCCATGAACTCCGCCACCGCTTCCATGAGATCTGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCGTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACACGACAAGAATTTCGATCCCTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGCAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCCATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAACCGAGCTCCAGGAACTCGTTGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCCGCGGCGATTGCTTCCAAAAGGTACATGGAGGCGGCCATGAACTCCGCCACCGCTTCCATGAGATCTGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCGTGA

Protein sequence

MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQQAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRYMEAAMNSATASMRSAWKAISSNKVHPS
BLAST of CmaCh16G003770 vs. TrEMBL
Match: A0A0A0LAB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.6e-65
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           QAEDYLDSVMEDAMDEFRRFEEEFDRMAE ELQ+L+DKSEKARKMGSLMEKAA++ASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of CmaCh16G003770 vs. TrEMBL
Match: A0A061DZ26_THECC (Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-51
Identity = 112/147 (76.19%), Postives = 129/147 (87.76%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLSDQAL DKNFDPSTIEDLMKLFEIE+YK+WAA EL+ + E +EAE  MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +R ++ EL  L + +E+ARKMG+LMEK A IASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of CmaCh16G003770 vs. TrEMBL
Match: I1MDP1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G046700 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.0e-51
Identity = 108/147 (73.47%), Postives = 132/147 (89.80%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLSDQAL DKNFDPSTIEDLMKLFEIE+YK+WAA+EL+ + E +EAE  M+
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQEKEVEEAEAGME 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           +AE+YLDSVME AMDEFRRFEEE +RM++ E++ LV  +E+ARKMG+LMEK A+IASK+Y
Sbjct: 61  EAEEYLDSVMESAMDEFRRFEEELERMSKNEMEGLVQTAERARKMGNLMEKGASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSSGKVHPS 147

BLAST of CmaCh16G003770 vs. TrEMBL
Match: A0A0D2Q5V4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.0e-51
Identity = 111/147 (75.51%), Postives = 131/147 (89.12%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+S+FTFLSDQAL DKNFDPS IEDLMKLFEIE+YK+WAA EL+ + E +EAE +MQ
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSNIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           QAE YLDSVME AMDEFRR EEE +RMA+ EL++L D ++KARKMG+LMEKAAAIASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

BLAST of CmaCh16G003770 vs. TrEMBL
Match: A0A0B2RFU1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_005503 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.0e-51
Identity = 108/147 (73.47%), Postives = 132/147 (89.80%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLSDQAL DKNFDPSTIEDLMKLFEIE+YK+WAA+EL+ + E +EAE  M+
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQEKEVEEAEAGME 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           +AE+YLDSVME AMDEFRRFEEE +RM++ E++ LV  +E+ARKMG+LMEK A+IASK+Y
Sbjct: 61  EAEEYLDSVMESAMDEFRRFEEELERMSKNEMEGLVQTAERARKMGNLMEKGASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSSGKVHPS 147

BLAST of CmaCh16G003770 vs. TAIR10
Match: AT1G60870.1 (AT1G60870.1 maternal effect embryo arrest 9)

HSP 1 Score: 158.3 bits (399), Expect = 3.6e-39
Identity = 89/147 (60.54%), Postives = 113/147 (76.87%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALI  FT LSDQAL DK FDPS IEDLM+LFE+++YK+WAA E + Q E +EAE +++
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           +AE  LD  ME  M+E+RR  EE +RM   EL+EL +K+E AR+ G+LMEKAA +A+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

BLAST of CmaCh16G003770 vs. NCBI nr
Match: gi|449464480|ref|XP_004149957.1| (PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 8.1e-65
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           QAEDYLDSVMEDAMDEFRRFEEEFDRMAE ELQ+L+DKSEKARKMGSLMEKAA++ASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of CmaCh16G003770 vs. NCBI nr
Match: gi|1009150402|ref|XP_015893000.1| (PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba])

HSP 1 Score: 217.6 bits (553), Expect = 1.4e-53
Identity = 115/147 (78.23%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           ME+L+SQFT LS++AL DKNFDPST+EDLMKLFEIEAYKSWAA ELQ QNE +EAE+AMQ
Sbjct: 1   MESLLSQFTILSNEALQDKNFDPSTVEDLMKLFEIEAYKSWAAMELQHQNEVKEAEVAMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +RMA+TEL  LV+ +E AR+MG+ MEKAA IASKRY
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERMAKTELNSLVETAEGARRMGNFMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +S+NKVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSTNKVHPS 147

BLAST of CmaCh16G003770 vs. NCBI nr
Match: gi|1021581615|ref|XP_016180185.1| (PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis])

HSP 1 Score: 212.6 bits (540), Expect = 4.6e-52
Identity = 111/147 (75.51%), Postives = 133/147 (90.48%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFT LSD AL DKNFDPSTIEDLMKLFEIE+YK+WAA+EL+ Q E +EAE++MQ
Sbjct: 1   MEALLSQFTLLSDHALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQQTEVEEAEVSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           +AEDYLDSVME AMDEFRRFEEEF+ M++ E++ LV+ +E ARKMG+LMEKAA+IASK+Y
Sbjct: 61  EAEDYLDSVMESAMDEFRRFEEEFESMSKAEMESLVNTAESARKMGNLMEKAASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGISSGKVHPS 147

BLAST of CmaCh16G003770 vs. NCBI nr
Match: gi|590683028|ref|XP_007041500.1| (Maternal effect embryo arrest 9 [Theobroma cacao])

HSP 1 Score: 210.3 bits (534), Expect = 2.3e-51
Identity = 112/147 (76.19%), Postives = 129/147 (87.76%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFTFLSDQAL DKNFDPSTIEDLMKLFEIE+YK+WAA EL+ + E +EAE  MQ
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           QAEDYLDSVME AMDEFRRFEEE +R ++ EL  L + +E+ARKMG+LMEK A IASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of CmaCh16G003770 vs. NCBI nr
Match: gi|1012251162|ref|XP_015943646.1| (PREDICTED: uncharacterized protein LOC107468801 [Arachis duranensis])

HSP 1 Score: 210.3 bits (534), Expect = 2.3e-51
Identity = 110/147 (74.83%), Postives = 132/147 (89.80%), Query Frame = 1

Query: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEAL+SQFT LSD AL DKNFDPSTIEDLMKLFEIE+YK+WAA+EL+ Q E +EAE++MQ
Sbjct: 1   MEALLSQFTLLSDHALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQQKEVEEAEVSMQ 60

Query: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120
           +AEDYLDSVME AMDEFRRFEEE + M++ E++ LV+ +E ARKMG+LMEKAA+IASK+Y
Sbjct: 61  EAEDYLDSVMESAMDEFRRFEEELESMSKAEMESLVNTAESARKMGNLMEKAASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGISSGKVHPS 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAB6_CUCSA5.6e-6593.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1[more]
A0A061DZ26_THECC1.6e-5176.19Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1[more]
I1MDP1_SOYBN6.0e-5173.47Uncharacterized protein OS=Glycine max GN=GLYMA_15G046700 PE=4 SV=1[more]
A0A0D2Q5V4_GOSRA6.0e-5175.51Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1[more]
A0A0B2RFU1_GLYSO6.0e-5173.47Uncharacterized protein OS=Glycine soja GN=glysoja_005503 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G60870.13.6e-3960.54 maternal effect embryo arrest 9[more]
Match NameE-valueIdentityDescription
gi|449464480|ref|XP_004149957.1|8.1e-6593.88PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus][more]
gi|1009150402|ref|XP_015893000.1|1.4e-5378.23PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba][more]
gi|1021581615|ref|XP_016180185.1|4.6e-5275.51PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis][more]
gi|590683028|ref|XP_007041500.1|2.3e-5176.19Maternal effect embryo arrest 9 [Theobroma cacao][more]
gi|1012251162|ref|XP_015943646.1|2.3e-5174.83PREDICTED: uncharacterized protein LOC107468801 [Arachis duranensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009555 pollen development
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G003770.1CmaCh16G003770.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 43..90
scor
NoneNo IPR availablePANTHERPTHR37707FAMILY NOT NAMEDcoord: 2..147
score: 9.3