CmaCh04G005190 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G005190
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMaternal effect embryo arrest 9
LocationCma_Chr04 : 2636103 .. 2636546 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCACCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTTTGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGTTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCACCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTTTGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGTTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAATTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCACCAGGCTGAGGATTATCTCGATTCCGTCATGGAAGATGCTTTGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGTTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Protein sequence

MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMHQAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS
BLAST of CmaCh04G005190 vs. TrEMBL
Match: A0A0A0LAB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 9.6e-65
Identity = 135/147 (91.84%), Postives = 141/147 (95.92%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAM 
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQ L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of CmaCh04G005190 vs. TrEMBL
Match: A0A061DZ26_THECC (Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-51
Identity = 107/147 (72.79%), Postives = 129/147 (87.76%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEAL+SQFTFLSD+ALQDKNFDPSTIEDLMKLFEIE+Y +WAA+EL+ + E ++AE  M 
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME A+DEFRRFEEE +R ++ EL  L + +E+ARKMG+LMEK A +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of CmaCh04G005190 vs. TrEMBL
Match: A0A0D2Q5V4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.7e-51
Identity = 107/147 (72.79%), Postives = 131/147 (89.12%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEAL+S+FTFLSD+ALQDKNFDPS IEDLMKLFEIE+Y +WAA+EL+ + E ++AE +M 
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSNIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAE YLDSVME A+DEFRR EEE +RMA+ EL+DL D ++KARKMG+LMEKAAA+ASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

BLAST of CmaCh04G005190 vs. TrEMBL
Match: A0A067KV72_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05035 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-51
Identity = 108/147 (73.47%), Postives = 127/147 (86.39%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEAL+S FT LSD+ALQDKNFDPS IEDLMKLFEIEAY SWAA+EL+ + E  +AEIAM+
Sbjct: 1   MEALLSHFTLLSDQALQDKNFDPSAIEDLMKLFEIEAYKSWAAMELEQEKEVEEAEIAMN 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME A+DEFRRFEEE +RMA+ EL  L   ++ ARK+G LMEKAA +ASKRY
Sbjct: 61  KAEDYLDSVMESAMDEFRRFEEEMERMAKAELDSLEQTADNARKVGKLMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISSNK+HPS
Sbjct: 121 IEAAVNSATASMKSAWKGISSNKIHPS 147

BLAST of CmaCh04G005190 vs. TrEMBL
Match: A0A0B2RFU1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_005503 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.1e-50
Identity = 104/147 (70.75%), Postives = 129/147 (87.76%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEAL+SQFTFLSD+ALQDKNFDPSTIEDLMKLFEIE+Y +WAA EL+ + E  +AE  M 
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQEKEVEEAEAGME 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE+YLDSVME A+DEFRRFEEE +RM++ E++ LV  +E+ARKMG+LMEK A++ASK+Y
Sbjct: 61  EAEEYLDSVMESAMDEFRRFEEELERMSKNEMEGLVQTAERARKMGNLMEKGASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSSGKVHPS 147

BLAST of CmaCh04G005190 vs. TAIR10
Match: AT1G60870.1 (AT1G60870.1 maternal effect embryo arrest 9)

HSP 1 Score: 157.5 bits (397), Expect = 6.2e-39
Identity = 86/147 (58.50%), Postives = 111/147 (75.51%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALI  FT LSD+AL DK FDPS IEDLM+LFE+++Y +WAALE + Q E  +AE ++ 
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE  LD  ME  ++E+RR  EE +RM   EL++L +K+E AR+ G+LMEKAA VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

BLAST of CmaCh04G005190 vs. NCBI nr
Match: gi|449464480|ref|XP_004149957.1| (PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-64
Identity = 135/147 (91.84%), Postives = 141/147 (95.92%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAM 
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVMEDA+DEFRRFEEEFDRMAE ELQ L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

BLAST of CmaCh04G005190 vs. NCBI nr
Match: gi|1009150402|ref|XP_015893000.1| (PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba])

HSP 1 Score: 219.5 bits (558), Expect = 3.8e-54
Identity = 111/147 (75.51%), Postives = 132/147 (89.80%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           ME+L+SQFT LS+ ALQDKNFDPST+EDLMKLFEIEAY SWAA+ELQHQNE ++AE+AM 
Sbjct: 1   MESLLSQFTILSNEALQDKNFDPSTVEDLMKLFEIEAYKSWAAMELQHQNEVKEAEVAMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME A+DEFRRFEEE +RMA+ EL  LV+ +E AR+MG+ MEKAA +ASKRY
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERMAKTELNSLVETAEGARRMGNFMEKAATIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +S+NKVHPS
Sbjct: 121 IEAALNSATASMKSAWKGLSTNKVHPS 147

BLAST of CmaCh04G005190 vs. NCBI nr
Match: gi|1021581615|ref|XP_016180185.1| (PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis])

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-51
Identity = 107/147 (72.79%), Postives = 130/147 (88.44%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEAL+SQFT LSD ALQDKNFDPSTIEDLMKLFEIE+Y +WAA EL+ Q E  +AE++M 
Sbjct: 1   MEALLSQFTLLSDHALQDKNFDPSTIEDLMKLFEIESYKAWAAAELEQQTEVEEAEVSMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVME A+DEFRRFEEEF+ M++ E++ LV+ +E ARKMG+LMEKAA++ASK+Y
Sbjct: 61  EAEDYLDSVMESAMDEFRRFEEEFESMSKAEMESLVNTAESARKMGNLMEKAASIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK ISS KVHPS
Sbjct: 121 IEAALNSATASMKSAWKGISSGKVHPS 147

BLAST of CmaCh04G005190 vs. NCBI nr
Match: gi|590683028|ref|XP_007041500.1| (Maternal effect embryo arrest 9 [Theobroma cacao])

HSP 1 Score: 210.3 bits (534), Expect = 2.3e-51
Identity = 107/147 (72.79%), Postives = 129/147 (87.76%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEAL+SQFTFLSD+ALQDKNFDPSTIEDLMKLFEIE+Y +WAA+EL+ + E ++AE  M 
Sbjct: 1   MEALLSQFTFLSDQALQDKNFDPSTIEDLMKLFEIESYKAWAAMELEQEEEVKEAETTMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDYLDSVME A+DEFRRFEEE +R ++ EL  L + +E+ARKMG+LMEK A +ASK+Y
Sbjct: 61  QAEDYLDSVMESAMDEFRRFEEEMERRSKAELNGLEETAERARKMGNLMEKGATIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           MEAA+NSATASM+SAWK +SSNKVHPS
Sbjct: 121 MEAAVNSATASMKSAWKGLSSNKVHPS 147

BLAST of CmaCh04G005190 vs. NCBI nr
Match: gi|823129596|ref|XP_012449287.1| (PREDICTED: uncharacterized protein LOC105772529 [Gossypium raimondii])

HSP 1 Score: 209.5 bits (532), Expect = 3.9e-51
Identity = 107/147 (72.79%), Postives = 131/147 (89.12%), Query Frame = 1

Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 60
           MEAL+S+FTFLSD+ALQDKNFDPS IEDLMKLFEIE+Y +WAA+EL+ + E ++AE +M 
Sbjct: 1   MEALLSEFTFLSDQALQDKNFDPSNIEDLMKLFEIESYKAWAAMELEQEEEVKEAETSMQ 60

Query: 61  QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAE YLDSVME A+DEFRR EEE +RMA+ EL+DL D ++KARKMG+LMEKAAA+ASK+Y
Sbjct: 61  QAEGYLDSVMEAAMDEFRRLEEEMERMAKAELKDLEDTADKARKMGNLMEKAAAIASKKY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           +EAA+NSATASM+SAWK +SS KVHPS
Sbjct: 121 VEAALNSATASMKSAWKGLSSKKVHPS 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAB6_CUCSA9.6e-6591.84Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214020 PE=4 SV=1[more]
A0A061DZ26_THECC1.6e-5172.79Maternal effect embryo arrest 9 OS=Theobroma cacao GN=TCM_006389 PE=4 SV=1[more]
A0A0D2Q5V4_GOSRA2.7e-5172.79Uncharacterized protein OS=Gossypium raimondii GN=B456_002G001000 PE=4 SV=1[more]
A0A067KV72_JATCU4.6e-5173.47Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05035 PE=4 SV=1[more]
A0A0B2RFU1_GLYSO5.1e-5070.75Uncharacterized protein OS=Glycine soja GN=glysoja_005503 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G60870.16.2e-3958.50 maternal effect embryo arrest 9[more]
Match NameE-valueIdentityDescription
gi|449464480|ref|XP_004149957.1|1.4e-6491.84PREDICTED: uncharacterized protein LOC101218253 [Cucumis sativus][more]
gi|1009150402|ref|XP_015893000.1|3.8e-5475.51PREDICTED: uncharacterized protein LOC107427163 [Ziziphus jujuba][more]
gi|1021581615|ref|XP_016180185.1|1.7e-5172.79PREDICTED: uncharacterized protein LOC107622713 [Arachis ipaensis][more]
gi|590683028|ref|XP_007041500.1|2.3e-5172.79Maternal effect embryo arrest 9 [Theobroma cacao][more]
gi|823129596|ref|XP_012449287.1|3.9e-5172.79PREDICTED: uncharacterized protein LOC105772529 [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009555 pollen development
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G005190.1CmaCh04G005190.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 70..90
scor
NoneNo IPR availablePANTHERPTHR37707FAMILY NOT NAMEDcoord: 2..147
score: 1.5
NoneNo IPR availablePANTHERPTHR37707:SF1MATERNAL EFFECT EMBRYO ARREST 9 PROTEINcoord: 2..147
score: 1.5

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G005190CmaCh16G003770Cucurbita maxima (Rimu)cmacmaB351
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G005190Cucumber (Chinese Long) v3cmacucB0829
CmaCh04G005190Cucumber (Gy14) v1cgycmaB0012
CmaCh04G005190Cucurbita moschata (Rifu)cmacmoB701
CmaCh04G005190Wild cucumber (PI 183967)cmacpiB705
CmaCh04G005190Cucumber (Chinese Long) v2cmacuB697
CmaCh04G005190Cucumber (Gy14) v2cgybcmaB410
CmaCh04G005190Cucumber (Gy14) v2cgybcmaB419