CmoCh15G006570 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G006570
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCalcium-binding family protein
LocationCmo_Chr15 : 3182657 .. 3183139 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTTCCTATTAGCTCAAACGACTTGCTCAGGATCTTCAACAGGCTCGACAAGAACAAGGATGGCCTCATTTGCGTTCAGGAGCTCAAGTGGCTCCTAGACACCATTGGCATTCAATTGACCATGGAGGAGTTGGAGTCGTTTCTCGAGAAACCGAGCCTTGACTTCGATGAGTTCTTGTTCTTTTACGAGTCGATATCGAAGCAAAATAAAGGCGAGTGCAAGGGTGGGTTGGTTGATGAGCATGGAGATGAAGAGGAAGATGTGGAGATTGTATATATGGCTTTTAAAGTGTTTGATGTGAATGGTGATGGCTTCATTTCTTGCGAGGAGCTCGAAAACGTGCTGTCGAGACTTGAGCTTTGGGATGCAAATAAAAGCGAGGTTGATTGTAGAAGCATGATCCGAGCTTATGACACCAATTTGGATGGGAAGCTCGATTTTGAGGAGTTTATGAATATGATGTTGTTCACAAACTAG

mRNA sequence

ATGGCTCTTCCTATTAGCTCAAACGACTTGCTCAGGATCTTCAACAGGCTCGACAAGAACAAGGATGGCCTCATTTGCGTTCAGGAGCTCAAGTGGCTCCTAGACACCATTGGCATTCAATTGACCATGGAGGAGTTGGAGTCGTTTCTCGAGAAACCGAGCCTTGACTTCGATGAGTTCTTGTTCTTTTACGAGTCGATATCGAAGCAAAATAAAGGCGAGTGCAAGGGTGGGTTGGTTGATGAGCATGGAGATGAAGAGGAAGATGTGGAGATTGTATATATGGCTTTTAAAGTGTTTGATGTGAATGGTGATGGCTTCATTTCTTGCGAGGAGCTCGAAAACGTGCTGTCGAGACTTGAGCTTTGGGATGCAAATAAAAGCGAGGTTGATTGTAGAAGCATGATCCGAGCTTATGACACCAATTTGGATGGGAAGCTCGATTTTGAGGAGTTTATGAATATGATGTTGTTCACAAACTAG

Coding sequence (CDS)

ATGGCTCTTCCTATTAGCTCAAACGACTTGCTCAGGATCTTCAACAGGCTCGACAAGAACAAGGATGGCCTCATTTGCGTTCAGGAGCTCAAGTGGCTCCTAGACACCATTGGCATTCAATTGACCATGGAGGAGTTGGAGTCGTTTCTCGAGAAACCGAGCCTTGACTTCGATGAGTTCTTGTTCTTTTACGAGTCGATATCGAAGCAAAATAAAGGCGAGTGCAAGGGTGGGTTGGTTGATGAGCATGGAGATGAAGAGGAAGATGTGGAGATTGTATATATGGCTTTTAAAGTGTTTGATGTGAATGGTGATGGCTTCATTTCTTGCGAGGAGCTCGAAAACGTGCTGTCGAGACTTGAGCTTTGGGATGCAAATAAAAGCGAGGTTGATTGTAGAAGCATGATCCGAGCTTATGACACCAATTTGGATGGGAAGCTCGATTTTGAGGAGTTTATGAATATGATGTTGTTCACAAACTAG
Homology
[Close]
BLAST of CmoCh15G006570 vs. Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-30
Identity = 77/154 (50.00%), Postives = 99/154 (64.29%), Query Frame = 1 

Query: 5   ISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIG-IQLTMEELESFLEKPSLDFDEFLFF 64
           I++NDL R+F  LDKN+DGL+ + EL W+LD +G  + T +ELE  + K SLD DEFL F
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 65  YESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLELW 124
           Y      +KG  K   +D   D +   E +  AF VFDVNGDG+IS EEL +VL RL   
Sbjct: 66  YYDAVLDSKGSKKN--IDVVADND---EAIARAFNVFDVNGDGYISAEELRDVLERLGFE 125

Query: 125 DANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMML 158
           +  K+  DC  MIR +D NLDG +DFEEF NM+L
Sbjct: 126 EEAKA-WDCGRMIRVHDKNLDGFVDFEEFKNMIL 153

[Close]
BLAST of CmoCh15G006570 vs. Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 1 

Query: 9   DLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEK------PSLDFDEFLF 68
           +L R+F   DKN DG I  +EL   L ++GI +  +EL   +EK        +D DEF  
Sbjct: 5   ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEF-- 64

Query: 69  FYESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLEL 128
                     GE    ++DE  +EEED++    AF VFD NGDGFI+ +EL+ VLS L L
Sbjct: 65  ----------GELYKTIMDEEDEEEEDMK---EAFNVFDQNGDGFITVDELKAVLSSLGL 124

Query: 129 WDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMM 157
               K+  DC+ MI+  D + DG+++++EF  MM
Sbjct: 125 -KQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142

[Close]
BLAST of CmoCh15G006570 vs. Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-17
Identity = 60/153 (39.22%), Postives = 86/153 (56.21%), Query Frame = 1 

Query: 10  LLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLE------KPSLDFDEFLFF 69
           L R+F+  DKN DG I V+EL   L  +G+     +L+S ++      K  L FD+F   
Sbjct: 29  LHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAAL 88

Query: 70  YESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLELW 129
           ++++ +   G  +G   D  G  E D+E    AF VFD +GDGFIS  EL+ VL +L L 
Sbjct: 89  HKTLDESFFGG-EGSCCD--GSPESDLE---EAFNVFDEDGDGFISAVELQKVLKKLGLP 148

Query: 130 DANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMM 157
           +A + E     MI + D+N DG++DF EF NMM
Sbjct: 149 EAGEIE-QVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]
BLAST of CmoCh15G006570 vs. Swiss-Prot
Match: CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-16
Identity = 56/154 (36.36%), Postives = 79/154 (51.30%), Query Frame = 1 

Query: 9   DLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKP------SLDFDEFLF 68
           +L R+F   DKN DG I   ELK    ++GI +   E+   + K       ++D DEF  
Sbjct: 5   ELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEF-- 64

Query: 69  FYESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLEL 128
                         G L  E  +E+E+ E +  AF+VFD NGDGFI+ EEL +VL+ + L
Sbjct: 65  --------------GSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGL 124

Query: 129 WDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMM 157
                 E DC+ MI   D + DG ++F+EF  MM
Sbjct: 125 KQGRTLE-DCKKMISKVDVDGDGMVNFKEFKQMM 141

[Close]
BLAST of CmoCh15G006570 vs. Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-16
Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 1 

Query: 5   ISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEK------PSLDFD 64
           I  ++L R+F   DKN DG I  +EL   L+ +GI +  ++L   + K        +D D
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 65  EFLFFYESISKQNKGECKGGLVDE-HGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVL 124
           EF   Y SI            VDE H D E + E +  AF VFD +GDGFI+ EEL++V+
Sbjct: 121 EFESLYSSI------------VDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVM 180

Query: 125 SRLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMM 157
           + L L    K+   C+ MI   D + DG+++++EF+ MM
Sbjct: 181 ASLGL-KQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMM 206

[Close]
BLAST of CmoCh15G006570 vs. TrEMBL
Match: A0A0A0KFQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376250 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.7e-65
Identity = 128/162 (79.01%), Postives = 144/162 (88.89%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           PISS DL RIF +LDKN DGLIC+QEL WLLD+IGIQLTMEELESFLE+PSLDFDEFLFF
Sbjct: 3   PISSKDLHRIFKKLDKNCDGLICLQELNWLLDSIGIQLTMEELESFLERPSLDFDEFLFF 62

Query: 64  YESISKQNKGECKGGLV----DEHGDE-EEDVEIVYMAFKVFDVNGDGFISCEELENVLS 123
           YESISKQNKGECKGG+     D   D+ ++D+EIVY+AFKVFD+NGDGFISC+ELENVL 
Sbjct: 63  YESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAFKVFDMNGDGFISCDELENVLV 122

Query: 124 RLELWDANKSEVD-CRSMIRAYDTNLDGKLDFEEFMNMMLFT 160
           +LELWDA++S+VD CRSMIRAYDTNLDGKLDFEEF NMML T
Sbjct: 123 KLELWDASRSDVDYCRSMIRAYDTNLDGKLDFEEFKNMMLLT 164

[Close]
BLAST of CmoCh15G006570 vs. TrEMBL
Match: A0A061FHR5_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 97/161 (60.25%), Postives = 119/161 (73.91%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           P+S NDL RIF +LDKN DGL+ ++EL WLL  IG+Q ++EEL SF+ KP LDF+EFLFF
Sbjct: 31  PLSKNDLQRIFEKLDKNGDGLVSLEELNWLLVRIGVQFSLEELGSFVGKPCLDFNEFLFF 90

Query: 64  YESISKQN---KGECKGGLVDEHG--DEEEDVEIVYMAFKVFDVNGDGFISCEELENVLS 123
           Y+SIS QN   K     G  +E G    +ED ++V  AFKVFD+NGDGFISCEEL++VL 
Sbjct: 91  YDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLV-KAFKVFDLNGDGFISCEELQSVLV 150

Query: 124 RLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMMLFT 160
           RL LWD +  + DCR+MI  YDTNLDG +DFEEF NMML T
Sbjct: 151 RLGLWDESSGK-DCRNMICFYDTNLDGMVDFEEFKNMMLHT 189

[Close]
BLAST of CmoCh15G006570 vs. TrEMBL
Match: A0A0D2MEI7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G223000 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.6e-41
Identity = 94/172 (54.65%), Postives = 119/172 (69.19%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           P+S NDL RIF +LDKN DGL+ ++EL WLL+ IG+Q ++EELES + KP L F+EFLFF
Sbjct: 3   PLSKNDLRRIFEKLDKNGDGLVSLEELNWLLERIGVQFSLEELESLVGKPCLGFEEFLFF 62

Query: 64  YESISKQNKGECKGGLVDEHGDEEEDVEIVY------------------MAFKVFDVNGD 123
           Y+SIS  N  + +    DE  +EEE++ +V+                   AFKVFD+NGD
Sbjct: 63  YDSISNHNT-KIEAAFDDE--EEEEEIRMVHGGGDDDDDDDDHGDSDLAKAFKVFDLNGD 122

Query: 124 GFISCEELENVLSRLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMML 158
           GFISCEEL++VL RL LWD  K+  DCR+MI  YDTNLDG +DFEEF NMML
Sbjct: 123 GFISCEELQSVLVRLGLWD-EKNGKDCRNMICFYDTNLDGMIDFEEFKNMML 170

[Close]
BLAST of CmoCh15G006570 vs. TrEMBL
Match: A4L9I0_GOSHI (Putative calcium-binding protein OS=Gossypium hirsutum PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.7e-41
Identity = 93/170 (54.71%), Postives = 117/170 (68.82%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           P+S NDL RIF +LDKN DGL+ ++EL WLL+ IG+Q ++EELES + KP L F+EFLFF
Sbjct: 3   PLSKNDLRRIFEKLDKNGDGLVSLEELNWLLERIGVQFSLEELESLVGKPCLGFEEFLFF 62

Query: 64  YESISKQNKGECKGGLVDEHGDEEEDVEIVY----------------MAFKVFDVNGDGF 123
           Y+SIS  N    K     +  +EEE++ +V+                 AFKVFD+NGDGF
Sbjct: 63  YDSISNHN---TKIEAAFDEEEEEEEIRMVHGGGDDDDDDHGDSDLAKAFKVFDLNGDGF 122

Query: 124 ISCEELENVLSRLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMML 158
           ISCEEL++VL RL LWD  K+  DCR+MI  YDTNLDG +DFEEF NMML
Sbjct: 123 ISCEELQSVLVRLGLWD-EKNGKDCRNMICFYDTNLDGMIDFEEFKNMML 168

[Close]
BLAST of CmoCh15G006570 vs. TrEMBL
Match: V4T321_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002693mg PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.7e-41
Identity = 90/163 (55.21%), Postives = 115/163 (70.55%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           P+++NDL RIF +LD+N DGL+ ++EL W+L+ IG+  T+EELE+ +EKPSL FDEFLFF
Sbjct: 3   PLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFF 62

Query: 64  YESISKQNKGECKGGLVD--EHGDE-------EEDVEIVYMAFKVFDVNGDGFISCEELE 123
            +SI   N         D  ++ DE       +E++  +Y AF VFDVNGDGFI+ EEL+
Sbjct: 63  CDSIISNNNNNNPNAAADASQNADEAADDDSGDEEISDLYKAFSVFDVNGDGFITSEELQ 122

Query: 124 NVLSRLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMML 158
           +VL+RL LWD  KS  DCRSMI  YDTN DG LDFEEF NMML
Sbjct: 123 SVLARLGLWD-EKSSQDCRSMIYVYDTNSDGVLDFEEFKNMML 164

[Close]
BLAST of CmoCh15G006570 vs. TAIR10
Match: AT1G21550.1 (AT1G21550.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 132.5 bits (332), Expect = 2.3e-31
Identity = 77/154 (50.00%), Postives = 99/154 (64.29%), Query Frame = 1 

Query: 5   ISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIG-IQLTMEELESFLEKPSLDFDEFLFF 64
           I++NDL R+F  LDKN+DGL+ + EL W+LD +G  + T +ELE  + K SLD DEFL F
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 65  YESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLELW 124
           Y      +KG  K   +D   D +   E +  AF VFDVNGDG+IS EEL +VL RL   
Sbjct: 66  YYDAVLDSKGSKKN--IDVVADND---EAIARAFNVFDVNGDGYISAEELRDVLERLGFE 125

Query: 125 DANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMML 158
           +  K+  DC  MIR +D NLDG +DFEEF NM+L
Sbjct: 126 EEAKA-WDCGRMIRVHDKNLDGFVDFEEFKNMIL 153

[Close]
BLAST of CmoCh15G006570 vs. TAIR10
Match: AT1G05990.1 (AT1G05990.1 EF hand calcium-binding protein family)

HSP 1 Score: 91.3 bits (225), Expect = 5.9e-19
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 1 

Query: 9   DLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEK------PSLDFDEFLF 68
           +L R+F   DKN DG I  +EL   L ++GI +  +EL   +EK        +D DEF  
Sbjct: 5   ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEF-- 64

Query: 69  FYESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLEL 128
                     GE    ++DE  +EEED++    AF VFD NGDGFI+ +EL+ VLS L L
Sbjct: 65  ----------GELYKTIMDEEDEEEEDMK---EAFNVFDQNGDGFITVDELKAVLSSLGL 124

Query: 129 WDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMM 157
               K+  DC+ MI+  D + DG+++++EF  MM
Sbjct: 125 -KQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142

[Close]
BLAST of CmoCh15G006570 vs. TAIR10
Match: AT5G44460.1 (AT5G44460.1 calmodulin like 43)

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-18
Identity = 60/153 (39.22%), Postives = 86/153 (56.21%), Query Frame = 1 

Query: 10  LLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLE------KPSLDFDEFLFF 69
           L R+F+  DKN DG I V+EL   L  +G+     +L+S ++      K  L FD+F   
Sbjct: 29  LHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAAL 88

Query: 70  YESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLELW 129
           ++++ +   G  +G   D  G  E D+E    AF VFD +GDGFIS  EL+ VL +L L 
Sbjct: 89  HKTLDESFFGG-EGSCCD--GSPESDLE---EAFNVFDEDGDGFISAVELQKVLKKLGLP 148

Query: 130 DANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMM 157
           +A + E     MI + D+N DG++DF EF NMM
Sbjct: 149 EAGEIE-QVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]
BLAST of CmoCh15G006570 vs. TAIR10
Match: AT4G12860.1 (AT4G12860.1 EF hand calcium-binding protein family)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 56/154 (36.36%), Postives = 79/154 (51.30%), Query Frame = 1 

Query: 9   DLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKP------SLDFDEFLF 68
           +L R+F   DKN DG I   ELK    ++GI +   E+   + K       ++D DEF  
Sbjct: 5   ELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEF-- 64

Query: 69  FYESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLEL 128
                         G L  E  +E+E+ E +  AF+VFD NGDGFI+ EEL +VL+ + L
Sbjct: 65  --------------GSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGL 124

Query: 129 WDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMM 157
                 E DC+ MI   D + DG ++F+EF  MM
Sbjct: 125 KQGRTLE-DCKKMISKVDVDGDGMVNFKEFKQMM 141

[Close]
BLAST of CmoCh15G006570 vs. TAIR10
Match: AT2G43290.1 (AT2G43290.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-17
Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 1 

Query: 5   ISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEK------PSLDFD 64
           I  ++L R+F   DKN DG I  +EL   L+ +GI +  ++L   + K        +D D
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 65  EFLFFYESISKQNKGECKGGLVDE-HGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVL 124
           EF   Y SI            VDE H D E + E +  AF VFD +GDGFI+ EEL++V+
Sbjct: 121 EFESLYSSI------------VDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVM 180

Query: 125 SRLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMM 157
           + L L    K+   C+ MI   D + DG+++++EF+ MM
Sbjct: 181 ASLGL-KQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMM 206

[Close]
BLAST of CmoCh15G006570 vs. NCBI nr
Match: gi|659081990|ref|XP_008441608.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 1.2e-66
Identity = 131/158 (82.91%), Postives = 141/158 (89.24%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           PISS DL RIF +LDKN DGL+C+QELKWLLD IGIQLTMEELESFLEKPSLDFDEFLFF
Sbjct: 3   PISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFLFF 62

Query: 64  YESISKQNKGECKGGLVD-EHGDEEEDVEIVYMAFKVFDVNGDGFISCEELENVLSRLEL 123
           YESISKQNKGECKGG+      D E+D EIVYMAFKVFD+NGDGFISC+ELENVL RLEL
Sbjct: 63  YESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLEL 122

Query: 124 WDANKSEVD-CRSMIRAYDTNLDGKLDFEEFMNMMLFT 160
           WDA++SEVD CRSMI+AYDTNLDGKLDFEEF NMML T
Sbjct: 123 WDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLT 160

[Close]
BLAST of CmoCh15G006570 vs. NCBI nr
Match: gi|449463432|ref|XP_004149438.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 6.7e-65
Identity = 128/162 (79.01%), Postives = 144/162 (88.89%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           PISS DL RIF +LDKN DGLIC+QEL WLLD+IGIQLTMEELESFLE+PSLDFDEFLFF
Sbjct: 3   PISSKDLHRIFKKLDKNCDGLICLQELNWLLDSIGIQLTMEELESFLERPSLDFDEFLFF 62

Query: 64  YESISKQNKGECKGGLV----DEHGDE-EEDVEIVYMAFKVFDVNGDGFISCEELENVLS 123
           YESISKQNKGECKGG+     D   D+ ++D+EIVY+AFKVFD+NGDGFISC+ELENVL 
Sbjct: 63  YESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAFKVFDMNGDGFISCDELENVLV 122

Query: 124 RLELWDANKSEVD-CRSMIRAYDTNLDGKLDFEEFMNMMLFT 160
           +LELWDA++S+VD CRSMIRAYDTNLDGKLDFEEF NMML T
Sbjct: 123 KLELWDASRSDVDYCRSMIRAYDTNLDGKLDFEEFKNMMLLT 164

[Close]
BLAST of CmoCh15G006570 vs. NCBI nr
Match: gi|590599643|ref|XP_007019238.1| (Calcium-binding EF-hand family protein [Theobroma cacao])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 97/161 (60.25%), Postives = 119/161 (73.91%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           P+S NDL RIF +LDKN DGL+ ++EL WLL  IG+Q ++EEL SF+ KP LDF+EFLFF
Sbjct: 31  PLSKNDLQRIFEKLDKNGDGLVSLEELNWLLVRIGVQFSLEELGSFVGKPCLDFNEFLFF 90

Query: 64  YESISKQN---KGECKGGLVDEHG--DEEEDVEIVYMAFKVFDVNGDGFISCEELENVLS 123
           Y+SIS QN   K     G  +E G    +ED ++V  AFKVFD+NGDGFISCEEL++VL 
Sbjct: 91  YDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLV-KAFKVFDLNGDGFISCEELQSVLV 150

Query: 124 RLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMMLFT 160
           RL LWD +  + DCR+MI  YDTNLDG +DFEEF NMML T
Sbjct: 151 RLGLWDESSGK-DCRNMICFYDTNLDGMVDFEEFKNMMLHT 189

[Close]
BLAST of CmoCh15G006570 vs. NCBI nr
Match: gi|568837720|ref|XP_006472871.1| (PREDICTED: probable calcium-binding protein CML44 [Citrus sinensis])

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-41
Identity = 94/165 (56.97%), Postives = 117/165 (70.91%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           P+ + DL RIF +LDKN D  + ++EL WLL+ IG++L++EELESF+ K SLD +EFLFF
Sbjct: 3   PLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFF 62

Query: 64  YESISKQN---------KGECKGGLVDEHGDEEEDVEIVYMAFKVFDVNGDGFISCEELE 123
           ++SISKQN         KGE  G   D   D++ ++  +  AF VFD+NGDGFISCEEL+
Sbjct: 63  WKSISKQNNNKVDDHEVKGEINGD--DNENDDDGEISDLLEAFNVFDLNGDGFISCEELQ 122

Query: 124 NVLSRLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMMLFT 160
           NVLSRL LWD  KS  DC  MI  YDTNLDG LDFEEF NMML +
Sbjct: 123 NVLSRLGLWD-EKSGKDCTRMICMYDTNLDGVLDFEEFKNMMLLS 164

[Close]
BLAST of CmoCh15G006570 vs. NCBI nr
Match: gi|823136399|ref|XP_012467960.1| (PREDICTED: probable calcium-binding protein CML44 [Gossypium raimondii])

HSP 1 Score: 176.0 bits (445), Expect = 5.2e-41
Identity = 94/172 (54.65%), Postives = 119/172 (69.19%), Query Frame = 1 

Query: 4   PISSNDLLRIFNRLDKNKDGLICVQELKWLLDTIGIQLTMEELESFLEKPSLDFDEFLFF 63
           P+S NDL RIF +LDKN DGL+ ++EL WLL+ IG+Q ++EELES + KP L F+EFLFF
Sbjct: 3   PLSKNDLRRIFEKLDKNGDGLVSLEELNWLLERIGVQFSLEELESLVGKPCLGFEEFLFF 62

Query: 64  YESISKQNKGECKGGLVDEHGDEEEDVEIVY------------------MAFKVFDVNGD 123
           Y+SIS  N  + +    DE  +EEE++ +V+                   AFKVFD+NGD
Sbjct: 63  YDSISNHNT-KIEAAFDDE--EEEEEIRMVHGGGDDDDDDDDHGDSDLAKAFKVFDLNGD 122

Query: 124 GFISCEELENVLSRLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMML 158
           GFISCEEL++VL RL LWD  K+  DCR+MI  YDTNLDG +DFEEF NMML
Sbjct: 123 GFISCEELQSVLVRLGLWD-EKNGKDCRNMICFYDTNLDGMIDFEEFKNMML 170

The following BLAST results are available for this feature:
BLAST of CmoCh15G006570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML44_ARATH4.1e-3050.00Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=... [more]
CML7_ARATH1.1e-1738.96Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1[more]
CML43_ARATH4.0e-1739.22Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=... [more]
CML2_ARATH2.0e-1636.36Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1[more]
CML5_ARATH2.6e-1636.48Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2[more]
BLAST of CmoCh15G006570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFQ6_CUCSA4.7e-6579.01Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376250 PE=4 SV=1[more]
A0A061FHR5_THECC1.1e-4260.25Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=... [more]
A0A0D2MEI7_GOSRA3.6e-4154.65Uncharacterized protein OS=Gossypium raimondii GN=B456_002G223000 PE=4 SV=1[more]
A4L9I0_GOSHI4.7e-4154.71Putative calcium-binding protein OS=Gossypium hirsutum PE=4 SV=1[more]
V4T321_9ROSI4.7e-4155.21Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002693mg PE=4 SV=1[more]
BLAST of CmoCh15G006570 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21550.12.3e-3150.00 Calcium-binding EF-hand family protein[more]
AT1G05990.15.9e-1938.96 EF hand calcium-binding protein family[more]
AT5G44460.12.2e-1839.22 calmodulin like 43[more]
AT4G12860.11.1e-1736.36 EF hand calcium-binding protein family[more]
AT2G43290.11.5e-1736.48 Calcium-binding EF-hand family protein[more]
BLAST of CmoCh15G006570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081990|ref|XP_008441608.1|1.2e-6682.91PREDICTED: probable calcium-binding protein CML44 [Cucumis melo][more]
gi|449463432|ref|XP_004149438.1|6.7e-6579.01PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus][more]
gi|590599643|ref|XP_007019238.1|1.6e-4260.25Calcium-binding EF-hand family protein [Theobroma cacao][more]
gi|568837720|ref|XP_006472871.1|2.3e-4156.97PREDICTED: probable calcium-binding protein CML44 [Citrus sinensis][more]
gi|823136399|ref|XP_012467960.1|5.2e-4154.65PREDICTED: probable calcium-binding protein CML44 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G006570.1CmoCh15G006570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 13..31
score: 9.
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 94..156
score: 1.6
IPR002048EF-hand domainSMARTSM00054efh_1coord: 92..120
score: 0.0022coord: 131..159
score: 0.17coord: 9..37
score: 0.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 5..40
score: 12.087coord: 88..123
score: 13.286coord: 127..160
score: 13
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 6..42
score: 5.3E-10coord: 100..156
score: 1.2E-18coord: 55..99
score: 7.
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 9..157
score: 7.46
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 101..113
score: -coord: 18..30
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..157
score: 7.3
NoneNo IPR availablePANTHERPTHR10891:SF530SUBFAMILY NOT NAMEDcoord: 1..157
score: 7.3