CmoCh04G025100 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G025100
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCalcium-binding family protein
LocationCmo_Chr04 : 18496081 .. 18499791 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCCTATTATTAGCATTAACGACTTGCTCCGCATCTTCAACAAGCTCGACAAGAACCGCGATGGCCTCATTTGTCTACACGAGCTCAACTGGCTCCTCGACACGATCGGCGTCGAGCTAACCATGGAGGACTTGCACTCATTTCTAGAGAAACCAAGCCTCGACTTCAACGAGTTCTTGTTCTTTTATGAATCGATATCGAAGCAAAACAAAGGCGAGTGCAAGGGAGGTGTGAGCGATGTCAACGCAAGAGAGGAAGATGTCGACGTTGTATATATGGCGTTTAAAGTGTTCGATATGAACGATGATGGCTTCATTTCTTGTGAGGAGCTACAACTTGTGTTGTCAAGACTAGAGCTTTGGGATGTAAACACAACTGATACTGATTGTAAAAGTATGATCCGCGCTTATGATACCAATTTGGATGGGATGCTTGATTTCGAGGAGTTTAAGAATATGATGTCGTTGAGAAGTTCTTGATTCACTTTCAACTCGTAATGTTGCTTTGTTTGAAAAGCGGTGTGTTTCGTGTCTAAGTTATTTCATAAGAAATTTTTTTCTTTTGTCACATGTTGATAAACACGGTTGAAATTTATAGTGCAACTTCCACCTACTTGATTCACTCGGTAGTTCTTCTCAATGATAACGTCCCACAGTTATAAGTAATGACTAACGTATTCAATTTTAAAGTATAATTTGATCCGAAATTGCTAATTATTTGATTATGGAATTAATTTAACTTAATCAAACTCATTGGGTTTGAAATTAGAGTGTAATTTTAGAGAAATTTGAGTTTGAATTTAGAGTTGAGAGTTTGGCAACGGTGTTGTTGGTTTAAAATGAGGATAAGAAAACCGTAAGCTCCACGCTCGCGCCACACGATTTTTCTTCTTCTTCTTCGGTCAATGCCCAGTCGTCGCCGTCTCCCTTCTGCCTCGCTGTCAGTTTGTGCGCCGTCGCTCCCAGCCGCCCTTCGAGCAGCAACTATCGCGTCATCCACCTCGTTTGCTACCTTCCAGATCTGACCAATACGATTCTCTCTTGCATTTCCGGCGAGGTATTGTTCCGACAAAACAATATCCACGACGTTTGGACCTTTGATCTACGGATTGGAGCCTATTCGAGGTCGAACAACACTATTTCGCGAGGATTTCTTGGGTAAAGTTACTCTAAATCCAATCGAACCCTAATCTAATTCGTAGAATGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATTTGAAACTGTTTTGTGCATAGTCTTGAACGGATTCGTTTAGTCCTTGAAATTGCTATTAATCTTTTGGATGTTAATATCTTGTTTAGGATTTAAGATTAAGACAAAAACCCACCGAAGTTGAAAAACATTAGAAAATGCATCTAAGATGTAGCCGCAACCATGCCTAATCGGTAGAATATGCTGCGGTTAGCGCTCTCATTTTCAACTATCAGTAGTCGAGAGCCATTTTCAACACTAAGTCTATTAAATTGATGCCCCAAAATTTCTAATTCCTTTCGGTCCTTAAGAATTAATCTTCCAGGTTCTAAATTTCTTGATTGTTTGATTTTTAGTCTTAAGCTTGAATGTCTAGACCTGCCTAGAGTAGTAATCAATTAAAGTAACTTGAACCTCTCAATGAAGGTGCCTTTGCTGGACACAAATTTGAGAATTTGAGCCTTTAGACTGTCCAAAGACAATGTTCACAGAAATTATAAGGCTCCTAGAGCCTTAAGACTTAACCAGCCCCTGTTTCTCAAGTTCTTGTAGACCTTTTTCACTGTTGTGAGGGTTTTCTATGCCAAAATTCTATTTCATTAACTTCATTCTTTTGTGCTACACAATAGTGTGCTGGAAAAGAAATGTTCTTAATAATGGTACACCCATTCTTATTTTTTCCATTGAACGGAGTCCTCCCTCCCTTATCTAGTTTGAAACTTCCTTTACTGCCAGAGAAGGAACAACCTTGACCATCAAGCATTCCCATTAAAATCTAATTTCTTCTTAACCTTGGAACATGTCTAACATCTCTAAGTAGTATGTGAGATCCCACATTGGTTGGAGAGAGGACGAAGCATTCATCGCAAGAATGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACCAGATACGTAATGCGCTGTTACGTAGTATGTCTCTATTGTCTTGGAGTTCTAAATACCACTGAGTCTGTTCCAATCACTTTACACTCATGATTGTCTCCCACGAACACTGATCCACCATCCCATGATTTGTCTTTAGAGGATGTCATATGAAAGGGTACACCGAGTCCAAGACCGAAGTCTTCCCTCTTTCCAGTATCCTGCTCAGTAGCTTTCTCCCCATATGAAAGGTAACTCGATTCCATCCTCCCTAATAGAGACATCTCCTTTCCCATGTTCCTTTGTTGTTCTTAATTCTCTTTTGTAGGGAATTTTTGTTCTCTATGGGCAGTTTCTCTTGAAGTGCCCTTCATTTTGGCAAATGAAGCACCTTAGAACATTTGTTTCCTTCTGAAAACATTGCCCCTTTACGAACTTCCCTTTTCTTGGATTATACCATTTTCTTTTGTAAACGAGGATTCAGCATCTCCATTTCCCTTTGTTTCAGATTTCAACTCTTAACTGCTTGCATCTCAAAGCTGTAATAACAGTGTCGTTATTGAGTGCATCGCTTCCATATTTGAAGACCGATTTCACATTGCTAGAACTATCAGGCAATGATTTGAGAATTGCTGCTTCACTTTCCTCTCCTAGTTACTCCCCAGTTTGGGGCAATATCTCAGAACTTTGGATTTAGTTATGTTCGTAGTTTGTACGAAAGCATGATATAAAAAGCATGTAATAGAAATTTGAGCCTAAACTAAGTTGATCCGATTCATGAAAAAGCATGTCGAAGTTATATGATGCATGTTTTCCAAGAAATAAATTGTTAGAGCGCTATATATGTTGAACATTATTTAGTACGATAGAAAGCATGTTATAAGAAACTTATTATCAAGATTTGGGCATGGGATGATCTAAGACGATATATGTTGAACATTATTATGTATGTTTTCTAAGAAAAGTACGAACTAAACTATGAACGGTATGGATATGAAATTATGACTAGGTATCCATGTTTAGGTCGCCTATGTATGTTTCTATTATATATGTATGTGATTGTAGCGGTTATATGGGGATGATTAAAGATTCGCCAACTAGTCTTAATCATAAACCTGACTTGATTGTCAGGGGTCTGAAAAAATATAGAACAAACTTATGATATATGATTGTATTATGTGGGGCTATTTATGAAGTTTGCAAGTTAGCTTTTCTTTAGTGAACCTGTCACGAGGCGACAGAGGTCCACAGTTGTAACTTAGAATTGGTCGATAGGATCAAGAATCAAGAATTTGAACTAGTTTTTGTTGGATGAAAGTGTCCCACATCAGTTAATTTAGAGAATGGTCATGGTTTTATAAACAAAAAATACTCTCTCCATCAGGCCACTTCCCGTTCAACTTGAAAAAGGGTATTAAAATCCTTGCG

mRNA sequence

ATGTCTCCTATTATTAGCATTAACGACTTGCTCCGCATCTTCAACAAGCTCGACAAGAACCGCGATGGCCTCATTTGTCTACACGAGCTCAACTGGCTCCTCGACACGATCGGCGTCGAGCTAACCATGGAGGACTTGCACTCATTTCTAGAGAAACCAAGCCTCGACTTCAACGAGTTCTTGTTCTTTTATGAATCGATATCGAAGCAAAACAAAGGCGAGTGCAAGGGAGGTGTGAGCGATGTCAACGCAAGAGAGGAAGATGTCGACGTTGTATATATGGCGTTTAAAGTGTTCGATATGAACGATGATGGCTTCATTTCTTGTGAGGAGCTACAACTTGTGTTGTCAAGACTAGAGCTTTGGGATTCGTCGCCGTCTCCCTTCTGCCTCGCTGTCAGTTTGTGCGCCGTCGCTCCCAGCCGCCCTTCGAGCAGCAACTATCGCGTCATCCACCTCGTTTGCTACCTTCCAGATCTGACCAATACGATTCTCTCTTGCATTTCCGGCGAGGTATTGTTCCGACAAAACAATATCCACGACGTTTGGACCTTTGATCTACGGATTGGAGCCTATTCGAGGTCGAACAACACTATTTCGCGAGGATTTCTTGGAGGATGTCATATGAAAGGGTACACCGAGTCCAAGACCGAAATTTCAACTCTTAACTGCTTGCATCTCAAAGCTGTAATAACAGTGTCGTTATTGAGTGCATCGCTTCCATATTTGAAGACCGATTTCACATTGCTAGAACTATCAGGCAATGATTTGAGAATTGCTGCTTCACTTTCCTCTCCTAGTTACTCCCCAGTTTGGGGCAATATCTCAGAACTTTGGATTTAGTTATGTTCGTAGTTTGTACGAAAGCATGATATAAAAAGCATGTAATAGAAATTTGAGCCTAAACTAAGTTGATCCGATTCATGAAAAAGCATGTCGAAGTTATATGATGCATGTTTTCCAAGAAATAAATTGTTAGAGCGCTATATATGTTGAACATTATTTAGTACGATAGAAAGCATGTTATAAGAAACTTATTATCAAGATTTGGGCATGGGATGATCTAAGACGATATATGTTGAACATTATTATGTATGTTTTCTAAGAAAAGTACGAACTAAACTATGAACGGTATGGATATGAAATTATGACTAGGTATCCATGTTTAGGTCGCCTATGTATGTTTCTATTATATATGTATGTGATTGTAGCGGTTATATGGGGATGATTAAAGATTCGCCAACTAGTCTTAATCATAAACCTGACTTGATTGTCAGGGGTCTGAAAAAATATAGAACAAACTTATGATATATGATTGTATTATGTGGGGCTATTTATGAAGTTTGCAAGTTAGCTTTTCTTTAGTGAACCTGTCACGAGGCGACAGAGGTCCACAGTTGTAACTTAGAATTGGTCGATAGGATCAAGAATCAAGAATTTGAACTAGTTTTTGTTGGATGAAAGTGTCCCACATCAGTTAATTTAGAGAATGGTCATGGTTTTATAAACAAAAAATACTCTCTCCATCAGGCCACTTCCCGTTCAACTTGAAAAAGGGTATTAAAATCCTTGCG

Coding sequence (CDS)

ATGTCTCCTATTATTAGCATTAACGACTTGCTCCGCATCTTCAACAAGCTCGACAAGAACCGCGATGGCCTCATTTGTCTACACGAGCTCAACTGGCTCCTCGACACGATCGGCGTCGAGCTAACCATGGAGGACTTGCACTCATTTCTAGAGAAACCAAGCCTCGACTTCAACGAGTTCTTGTTCTTTTATGAATCGATATCGAAGCAAAACAAAGGCGAGTGCAAGGGAGGTGTGAGCGATGTCAACGCAAGAGAGGAAGATGTCGACGTTGTATATATGGCGTTTAAAGTGTTCGATATGAACGATGATGGCTTCATTTCTTGTGAGGAGCTACAACTTGTGTTGTCAAGACTAGAGCTTTGGGATTCGTCGCCGTCTCCCTTCTGCCTCGCTGTCAGTTTGTGCGCCGTCGCTCCCAGCCGCCCTTCGAGCAGCAACTATCGCGTCATCCACCTCGTTTGCTACCTTCCAGATCTGACCAATACGATTCTCTCTTGCATTTCCGGCGAGGTATTGTTCCGACAAAACAATATCCACGACGTTTGGACCTTTGATCTACGGATTGGAGCCTATTCGAGGTCGAACAACACTATTTCGCGAGGATTTCTTGGAGGATGTCATATGAAAGGGTACACCGAGTCCAAGACCGAAATTTCAACTCTTAACTGCTTGCATCTCAAAGCTGTAATAACAGTGTCGTTATTGAGTGCATCGCTTCCATATTTGAAGACCGATTTCACATTGCTAGAACTATCAGGCAATGATTTGAGAATTGCTGCTTCACTTTCCTCTCCTAGTTACTCCCCAGTTTGGGGCAATATCTCAGAACTTTGGATTTAG
Homology
[Close]
BLAST of CmoCh04G025100 vs. Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 8.3e-18
Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 1 

Query: 5   ISINDLLRIFNKLDKNRDGLICLHELNWLLDTIG-VELTMEDLHSFLEKPSLDFNEFL-F 64
           I+ NDL R+F  LDKN+DGL+ L EL W+LD +G  E T ++L   + K SLD +EFL F
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 65  FYESISKQNKGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQLVLSRL 120
           +Y+++      + KG   +++   ++ + +  AF VFD+N DG+IS EEL+ VL RL
Sbjct: 66  YYDAVL-----DSKGSKKNIDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERL 117

[Close]
BLAST of CmoCh04G025100 vs. Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 1 

Query: 2   SPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEK------PSL 61
           SP ++   L RIF+  DKN DG I + EL+  L  +G+   + DL S +E         L
Sbjct: 22  SPSLNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGL 81

Query: 62  DFNEFLFFYESISKQN-KGECKGGVS--DVNAREEDVDVVYMAFKVFDMNDDGFISCEEL 121
           +F++F   ++++      G C GG +  D ++  E+   +  AFKVFD N DGFIS  EL
Sbjct: 82  NFDDFSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISAREL 141

[Close]
BLAST of CmoCh04G025100 vs. Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09
Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 1 

Query: 2   SPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLE------KPSL 61
           SP ++   L R+F+  DKN DG I + EL+  L  +G++    DL S ++      K  L
Sbjct: 21  SPSLNALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGL 80

Query: 62  DFNEFLFFYESISKQ---NKGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEEL 121
            F++F   ++++ +     +G C  G  + +  E        AF VFD + DGFIS  EL
Sbjct: 81  RFDDFAALHKTLDESFFGGEGSCCDGSPESDLEE--------AFNVFDEDGDGFISAVEL 140

[Close]
BLAST of CmoCh04G025100 vs. Swiss-Prot
Match: CAST_SOLTU (Calcium-binding protein CAST OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 46/133 (34.59%), Postives = 74/133 (55.64%), Query Frame = 1 

Query: 2   SPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFL------EKPSL 61
           SP ++   L RIF+  D+N D LI + EL+  L+ +G++  + ++ S +      E   L
Sbjct: 33  SPSLNSIRLRRIFDVFDRNHDCLISVEELSQALNLLGLDADLSEIESMVKLHIKPENTGL 92

Query: 62  DFNEFLFFYESISKQ---NKGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEEL 121
            F +F   + S++     +K E K G++   A++E    +  AF VFD N DGFIS +EL
Sbjct: 93  RFEDFETLHRSLNDVFFGSKCEDKLGLNPDPAQDESD--LKEAFDVFDENGDGFISAKEL 152

Query: 122 QLVLSRLELWDSS 126
           Q+VL +L L + S
Sbjct: 153 QVVLEKLGLPEGS 163

[Close]
BLAST of CmoCh04G025100 vs. Swiss-Prot
Match: ALLB3_BETPN (Calcium-binding allergen Bet v 3 OS=Betula pendula GN=BETVIII PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.4e-09
Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 1 

Query: 10  LLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLE------KPSLDFNEFLFF 69
           L RIF+  DKN DG+I + EL+  L+ +G+E  + +L S ++         L F +F+  
Sbjct: 41  LRRIFDLFDKNSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL 100

Query: 70  YESISKQNKGECKGGVSDVNAREEDVDVVYMA---------FKVFDMNDDGFISCEELQL 126
           ++S+   N      G  D +  EED+    ++         FKVFD + DG+IS  ELQ+
Sbjct: 101 HQSL---NDSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYISARELQM 160

[Close]
BLAST of CmoCh04G025100 vs. TrEMBL
Match: A0A0A0KFQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376250 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44
Identity = 92/131 (70.23%), Postives = 110/131 (83.97%), Query Frame = 1 

Query: 3   PIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEFLF 62
           P IS  DL RIF KLDKN DGLICL ELNWLLD+IG++LTME+L SFLE+PSLDF+EFLF
Sbjct: 2   PPISSKDLHRIFKKLDKNCDGLICLQELNWLLDSIGIQLTMEELESFLERPSLDFDEFLF 61

Query: 63  FYESISKQNKGECKGGV------SDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQLVL 122
           FYESISKQNKGECKGGV      +D +  ++D+++VY+AFKVFDMN DGFISC+EL+ VL
Sbjct: 62  FYESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAFKVFDMNGDGFISCDELENVL 121

Query: 123 SRLELWDSSPS 128
            +LELWD+S S
Sbjct: 122 VKLELWDASRS 132

[Close]
BLAST of CmoCh04G025100 vs. TrEMBL
Match: A0A0A0KLD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173500 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.7e-36
Identity = 82/128 (64.06%), Postives = 100/128 (78.12%), Query Frame = 1 

Query: 1   MSPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEF 60
           MSP IS  DL RIF KLDKN DGLICL EL WL D +GVELTME+L SFLEKPSLDF++F
Sbjct: 1   MSPTISSEDLYRIFKKLDKNGDGLICLQELKWLFDRVGVELTMEELESFLEKPSLDFDQF 60

Query: 61  LFFYESISKQNKGECKG----GVSDVNAREEDVDVVYMAFKVFDM-NDDGFISCEELQLV 120
           LF Y+SISKQNKGEC+     G  + +  EED++++ MAFKVF+M +DDGFISC+ L+ V
Sbjct: 61  LFCYKSISKQNKGECEEEDVLGCLEEDDHEEDMEMICMAFKVFEMSDDDGFISCDGLENV 120

Query: 121 LSRLELWD 124
           L+RL  +D
Sbjct: 121 LARLNEYD 128

[Close]
BLAST of CmoCh04G025100 vs. TrEMBL
Match: A0A061FHR5_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30
Identity = 80/136 (58.82%), Postives = 93/136 (68.38%), Query Frame = 1 

Query: 1   MSPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEF 60
           MSP+ S NDL RIF KLDKN DGL+ L ELNWLL  IGV+ ++E+L SF+ KP LDFNEF
Sbjct: 29  MSPL-SKNDLQRIFEKLDKNGDGLVSLEELNWLLVRIGVQFSLEELGSFVGKPCLDFNEF 88

Query: 61  LFFYESISKQN------KGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQL 120
           LFFY+SIS QN      +    G    +   +ED D+V  AFKVFD+N DGFISCEELQ 
Sbjct: 89  LFFYDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLV-KAFKVFDLNGDGFISCEELQS 148

Query: 121 VLSRLELWDSSPSPFC 131
           VL RL LWD S    C
Sbjct: 149 VLVRLGLWDESSGKDC 162

[Close]
BLAST of CmoCh04G025100 vs. TrEMBL
Match: F6H0H4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01630 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.1e-28
Identity = 67/131 (51.15%), Postives = 92/131 (70.23%), Query Frame = 1 

Query: 2   SPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEFL 61
           S  +S  DL RIF+KLD+N DGL+ L ELNWLL+ +GV+ ++++L S +   +LDFNEFL
Sbjct: 3   SSSLSSIDLHRIFHKLDRNGDGLVSLGELNWLLERVGVQYSLDELESLVGNTTLDFNEFL 62

Query: 62  FFYESISKQNKGECKGGVSDVNAREEDVDV--VYMAFKVFDMNDDGFISCEELQLVLSRL 121
            FYESIS + KGE +    +V   EE+ DV  +  AF+VFD+N DGFI+C+ELQ VLSRL
Sbjct: 63  VFYESISTEKKGESEVEEEEVKEEEEEEDVGDLAKAFRVFDLNGDGFITCDELQSVLSRL 122

Query: 122 ELWDSSPSPFC 131
            +W+ +    C
Sbjct: 123 GMWEENGGGDC 133

[Close]
BLAST of CmoCh04G025100 vs. TrEMBL
Match: V4TCZ3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002706mg PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.2e-27
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1 

Query: 9   DLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEFLFFYESIS 68
           DL RIF +LDKN D  + L ELNWLL+ IGV L++E+L SF+ K SLD NEFLFF++SIS
Sbjct: 8   DLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFLFFWKSIS 67

Query: 69  KQNKG-----ECKGGVS-DVNAREEDVDV--VYMAFKVFDMNDDGFISCEELQLVLSRLE 128
           KQN       E K  ++ D N  ++D ++  +  AF VFD+N DGFISCEELQ VLSRL 
Sbjct: 68  KQNNNKVDDHEVKDEINGDDNENDDDGEISDLLEAFNVFDLNGDGFISCEELQNVLSRLG 127

Query: 129 LWDSSPSPFC 131
           LWD      C
Sbjct: 128 LWDEKSGKDC 137

[Close]
BLAST of CmoCh04G025100 vs. TAIR10
Match: AT1G21550.1 (AT1G21550.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-19
Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 1 

Query: 5   ISINDLLRIFNKLDKNRDGLICLHELNWLLDTIG-VELTMEDLHSFLEKPSLDFNEFL-F 64
           I+ NDL R+F  LDKN+DGL+ L EL W+LD +G  E T ++L   + K SLD +EFL F
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 65  FYESISKQNKGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQLVLSRL 120
           +Y+++      + KG   +++   ++ + +  AF VFD+N DG+IS EEL+ VL RL
Sbjct: 66  YYDAVL-----DSKGSKKNIDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERL 117

[Close]
BLAST of CmoCh04G025100 vs. TAIR10
Match: AT4G20780.1 (AT4G20780.1 calmodulin like 42)

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-13
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 1 

Query: 2   SPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEK------PSL 61
           SP ++   L RIF+  DKN DG I + EL+  L  +G+   + DL S +E         L
Sbjct: 22  SPSLNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGL 81

Query: 62  DFNEFLFFYESISKQN-KGECKGGVS--DVNAREEDVDVVYMAFKVFDMNDDGFISCEEL 121
           +F++F   ++++      G C GG +  D ++  E+   +  AFKVFD N DGFIS  EL
Sbjct: 82  NFDDFSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISAREL 141

[Close]
BLAST of CmoCh04G025100 vs. TAIR10
Match: AT5G44460.1 (AT5G44460.1 calmodulin like 43)

HSP 1 Score: 65.1 bits (157), Expect = 7.9e-11
Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 1 

Query: 2   SPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLE------KPSL 61
           SP ++   L R+F+  DKN DG I + EL+  L  +G++    DL S ++      K  L
Sbjct: 21  SPSLNALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGL 80

Query: 62  DFNEFLFFYESISKQ---NKGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEEL 121
            F++F   ++++ +     +G C  G  + +  E        AF VFD + DGFIS  EL
Sbjct: 81  RFDDFAALHKTLDESFFGGEGSCCDGSPESDLEE--------AFNVFDEDGDGFISAVEL 140

[Close]
BLAST of CmoCh04G025100 vs. TAIR10
Match: AT3G07490.1 (AT3G07490.1 ARF-GAP domain 11)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-10
Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 1 

Query: 9   DLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSL------DFNEFLF 68
           +L RIF   D+N DG I   ELN  L+ +G+ +  +DL   +EK  L      D  EF  
Sbjct: 5   ELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEEFGG 64

Query: 69  FYESISKQNKGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQLVLSRLEL 122
            Y++I ++              R+E+ D+   AF VFD N DGFI+ EEL+ VL+ L L
Sbjct: 65  LYQTIMEE--------------RDEEEDM-REAFNVFDQNRDGFITVEELRSVLASLGL 108

[Close]
BLAST of CmoCh04G025100 vs. TAIR10
Match: AT1G05990.1 (AT1G05990.1 EF hand calcium-binding protein family)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 1 

Query: 9   DLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEK------PSLDFNEFLF 68
           +L R+F   DKN DG I   EL+  L ++G+ +  ++L   +EK        +D +EF  
Sbjct: 5   ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGE 64

Query: 69  FYESISKQNKGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQLVLSRLEL 122
            Y++I  +   E           EED+     AF VFD N DGFI+ +EL+ VLS L L
Sbjct: 65  LYKTIMDEEDEE-----------EEDMK---EAFNVFDQNGDGFITVDELKAVLSSLGL 109

[Close]
BLAST of CmoCh04G025100 vs. NCBI nr
Match: gi|659081990|ref|XP_008441608.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 1 

Query: 1   MSPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEF 60
           MSPI S  DL RIF KLDKN DGL+CL EL WLLD IG++LTME+L SFLEKPSLDF+EF
Sbjct: 1   MSPISS-KDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEF 60

Query: 61  LFFYESISKQNKGECKGGVSDV--NAREEDVDVVYMAFKVFDMNDDGFISCEELQLVLSR 120
           LFFYESISKQNKGECKGGV+    +  E+D ++VYMAFKVFDMN DGFISC+EL+ VL R
Sbjct: 61  LFFYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVR 120

Query: 121 LELWDSSPS 128
           LELWD+S S
Sbjct: 121 LELWDASRS 128

[Close]
BLAST of CmoCh04G025100 vs. NCBI nr
Match: gi|449463432|ref|XP_004149438.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 2.3e-44
Identity = 92/131 (70.23%), Postives = 110/131 (83.97%), Query Frame = 1 

Query: 3   PIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEFLF 62
           P IS  DL RIF KLDKN DGLICL ELNWLLD+IG++LTME+L SFLE+PSLDF+EFLF
Sbjct: 2   PPISSKDLHRIFKKLDKNCDGLICLQELNWLLDSIGIQLTMEELESFLERPSLDFDEFLF 61

Query: 63  FYESISKQNKGECKGGV------SDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQLVL 122
           FYESISKQNKGECKGGV      +D +  ++D+++VY+AFKVFDMN DGFISC+EL+ VL
Sbjct: 62  FYESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAFKVFDMNGDGFISCDELENVL 121

Query: 123 SRLELWDSSPS 128
            +LELWD+S S
Sbjct: 122 VKLELWDASRS 132

[Close]
BLAST of CmoCh04G025100 vs. NCBI nr
Match: gi|778700636|ref|XP_004143706.2| (PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 6.7e-36
Identity = 82/128 (64.06%), Postives = 100/128 (78.12%), Query Frame = 1 

Query: 1   MSPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEF 60
           MSP IS  DL RIF KLDKN DGLICL EL WL D +GVELTME+L SFLEKPSLDF++F
Sbjct: 1   MSPTISSEDLYRIFKKLDKNGDGLICLQELKWLFDRVGVELTMEELESFLEKPSLDFDQF 60

Query: 61  LFFYESISKQNKGECKG----GVSDVNAREEDVDVVYMAFKVFDM-NDDGFISCEELQLV 120
           LF Y+SISKQNKGEC+     G  + +  EED++++ MAFKVF+M +DDGFISC+ L+ V
Sbjct: 61  LFCYKSISKQNKGECEEEDVLGCLEEDDHEEDMEMICMAFKVFEMSDDDGFISCDGLENV 120

Query: 121 LSRLELWD 124
           L+RL  +D
Sbjct: 121 LARLNEYD 128

[Close]
BLAST of CmoCh04G025100 vs. NCBI nr
Match: gi|590599643|ref|XP_007019238.1| (Calcium-binding EF-hand family protein [Theobroma cacao])

HSP 1 Score: 142.1 bits (357), Expect = 1.5e-30
Identity = 80/136 (58.82%), Postives = 93/136 (68.38%), Query Frame = 1 

Query: 1   MSPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEF 60
           MSP+ S NDL RIF KLDKN DGL+ L ELNWLL  IGV+ ++E+L SF+ KP LDFNEF
Sbjct: 29  MSPL-SKNDLQRIFEKLDKNGDGLVSLEELNWLLVRIGVQFSLEELGSFVGKPCLDFNEF 88

Query: 61  LFFYESISKQN------KGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQL 120
           LFFY+SIS QN      +    G    +   +ED D+V  AFKVFD+N DGFISCEELQ 
Sbjct: 89  LFFYDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLV-KAFKVFDLNGDGFISCEELQS 148

Query: 121 VLSRLELWDSSPSPFC 131
           VL RL LWD S    C
Sbjct: 149 VLVRLGLWDESSGKDC 162

[Close]
BLAST of CmoCh04G025100 vs. NCBI nr
Match: gi|764537104|ref|XP_011458832.1| (PREDICTED: probable calcium-binding protein CML44 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 134.8 bits (338), Expect = 2.3e-28
Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = 1 

Query: 1   MSPIISINDLLRIFNKLDKNRDGLICLHELNWLLDTIGVELTMEDLHSFLEKPSLDFNEF 60
           MSP+IS NDL RIF KLDKNRDG + L ELNWLL+ IGVE ++ +L S + KP LDFNEF
Sbjct: 1   MSPLIS-NDLERIFEKLDKNRDGQVSLEELNWLLERIGVEFSLHELESLVGKPGLDFNEF 60

Query: 61  LFFYESISKQNKGECKGGVSDVNAREEDVDVVYMAFKVFDMNDDGFISCEELQLVLSRLE 120
           LFFY+SIS  +  +   G    ++  ED   +  AF VFD+N DG+ISCEEL  VL RL 
Sbjct: 61  LFFYKSISAPDSNDGDDGSGSGSSDHEDESDLVKAFNVFDVNGDGYISCEELDSVLRRLG 120

Query: 121 LWDSSPSPFC 131
           + + + S  C
Sbjct: 121 VMEENSSRDC 129

The following BLAST results are available for this feature:
BLAST of CmoCh04G025100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML44_ARATH8.3e-1843.59Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=... [more]
CML42_ARATH1.2e-1137.21Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1[more]
CML43_ARATH1.4e-0933.33Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=... [more]
CAST_SOLTU1.8e-0934.59Calcium-binding protein CAST OS=Solanum tuberosum PE=2 SV=1[more]
ALLB3_BETPN5.4e-0932.82Calcium-binding allergen Bet v 3 OS=Betula pendula GN=BETVIII PE=1 SV=1[more]
BLAST of CmoCh04G025100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFQ6_CUCSA1.6e-4470.23Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376250 PE=4 SV=1[more]
A0A0A0KLD7_CUCSA4.7e-3664.06Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173500 PE=4 SV=1[more]
A0A061FHR5_THECC1.0e-3058.82Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=... [more]
F6H0H4_VITVI6.1e-2851.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01630 PE=4 SV=... [more]
V4TCZ3_9ROSI5.2e-2754.62Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002706mg PE=4 SV=1[more]
BLAST of CmoCh04G025100 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21550.14.6e-1943.59 Calcium-binding EF-hand family protein[more]
AT4G20780.16.5e-1337.21 calmodulin like 42[more]
AT5G44460.17.9e-1133.33 calmodulin like 43[more]
AT3G07490.13.9e-1036.97 ARF-GAP domain 11[more]
AT1G05990.11.3e-0835.29 EF hand calcium-binding protein family[more]
BLAST of CmoCh04G025100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081990|ref|XP_008441608.1|1.8e-4473.64PREDICTED: probable calcium-binding protein CML44 [Cucumis melo][more]
gi|449463432|ref|XP_004149438.1|2.3e-4470.23PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus][more]
gi|778700636|ref|XP_004143706.2|6.7e-3664.06PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus][more]
gi|590599643|ref|XP_007019238.1|1.5e-3058.82Calcium-binding EF-hand family protein [Theobroma cacao][more]
gi|764537104|ref|XP_011458832.1|2.3e-2853.85PREDICTED: probable calcium-binding protein CML44 isoform X2 [Fragaria vesca sub... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G025100.1CmoCh04G025100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 95..115
score: 4.8E-5coord: 13..30
score: 7.
IPR002048EF-hand domainSMARTSM00054efh_1coord: 91..119
score: 0.32coord: 9..37
score: 0
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 5..40
score: 11.78coord: 87..122
score: 11
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 7..120
score: 2.6
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 7..120
score: 1.12
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 100..112
score: -coord: 18..30
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 5..119
score: 4.5
NoneNo IPR availablePANTHERPTHR10891:SF530SUBFAMILY NOT NAMEDcoord: 5..119
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G025100Cucsa.328100Cucumber (Gy14) v1cgycmoB0906
CmoCh04G025100CmaCh15G006470Cucurbita maxima (Rimu)cmacmoB309
CmoCh04G025100CmaCh04G023940Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G025100Cla013901Watermelon (97103) v1cmowmB661
CmoCh04G025100Csa6G376250Cucumber (Chinese Long) v2cmocuB761
CmoCh04G025100MELO3C008466Melon (DHL92) v3.5.1cmomeB672
CmoCh04G025100ClCG08G006060Watermelon (Charleston Gray)cmowcgB680
CmoCh04G025100CSPI06G19980Wild cucumber (PI 183967)cmocpiB770
CmoCh04G025100Lsi08G004690Bottle gourd (USVL1VR-Ls)cmolsiB697
CmoCh04G025100Cp4.1LG13g04330Cucurbita pepo (Zucchini)cmocpeB657
CmoCh04G025100Cp4.1LG01g20760Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G025100Cp4.1LG06g08010Cucurbita pepo (Zucchini)cmocpeB708
CmoCh04G025100MELO3C008466.2Melon (DHL92) v3.6.1cmomedB760
CmoCh04G025100CsaV3_6G034010Cucumber (Chinese Long) v3cmocucB0900
CmoCh04G025100Cla97C08G148820Watermelon (97103) v2cmowmbB760
CmoCh04G025100Bhi04G001477Wax gourdcmowgoB0865
CmoCh04G025100CsGy6G019460Cucumber (Gy14) v2cgybcmoB817
CmoCh04G025100Carg01562Silver-seed gourdcarcmoB1121
CmoCh04G025100Carg15752Silver-seed gourdcarcmoB0094
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G025100CmoCh09G010550Cucurbita moschata (Rifu)cmocmoB029
CmoCh04G025100CmoCh15G006570Cucurbita moschata (Rifu)cmocmoB262
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G025100Cucurbita moschata (Rifu)cmocmoB367