Carg15752 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15752
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Calcium-binding EF-hand family protein
Location	Cucurbita_argyrosperma_scaffold_055 : 121382 .. 121738 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGACTTGCACTCATTTCTAGAGAAACCAAGCCTCGACTTCAACGAGTTCTTGTTCTTTTATGAATCGATATCGAAGCAAAACAAAGGCGAGTGCAAGGGAGGTGTGAGCGATGTCAACGCAAGAGAGGAAGATGTCGACATTGTATATATGGCGTTTAAAGTGTTCGATATGAACGATGATGGCTTCATTTCTTGTGAGGAGCTACAACTTGTGTTGTCAAGACTAGAGCTTTGGGATGTAAACACAACTGATACTGATTGTAAAAGTATGATCCGCGCTTATGATACCAATTTGGATGGGATGCTTGATTTCGAGGAGTTTAAGAACATGATGTCGTTGACAAGTTCTTGA

mRNA sequence

ATGGAGGACTTGCACTCATTTCTAGAGAAACCAAGCCTCGACTTCAACGAGTTCTTGTTCTTTTATGAATCGATATCGAAGCAAAACAAAGGCGAGTGCAAGGGAGGTGTGAGCGATGTCAACGCAAGAGAGGAAGATGTCGACATTGTATATATGGCGTTTAAAGTGTTCGATATGAACGATGATGGCTTCATTTCTTGTGAGGAGCTACAACTTGTGTTGTCAAGACTAGAGCTTTGGGATGTAAACACAACTGATACTGATTGTAAAAGTATGATCCGCGCTTATGATACCAATTTGGATGGGATGCTTGATTTCGAGGAGTTTAAGAACATGATGTCGTTGACAAGTTCTTGA

Coding sequence (CDS)

ATGGAGGACTTGCACTCATTTCTAGAGAAACCAAGCCTCGACTTCAACGAGTTCTTGTTCTTTTATGAATCGATATCGAAGCAAAACAAAGGCGAGTGCAAGGGAGGTGTGAGCGATGTCAACGCAAGAGAGGAAGATGTCGACATTGTATATATGGCGTTTAAAGTGTTCGATATGAACGATGATGGCTTCATTTCTTGTGAGGAGCTACAACTTGTGTTGTCAAGACTAGAGCTTTGGGATGTAAACACAACTGATACTGATTGTAAAAGTATGATCCGCGCTTATGATACCAATTTGGATGGGATGCTTGATTTCGAGGAGTTTAAGAACATGATGTCGTTGACAAGTTCTTGA

Protein sequence

MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS

Homology

[Close]

BLAST of Carg15752 vs. NCBI nr
Match: XP_022959484.1 (probable calcium-binding protein CML44 [Cucurbita moschata])

HSP 1 Score: 238.8 bits (608), Expect = 9.3e-60
Identity = 116/118 (98.31%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMN 60
           MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVD+VYMAFKVFDMN
Sbjct: 43  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDVVYMAFKVFDMN 102

Query: 61  DDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS 119
           DDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSL SS
Sbjct: 103 DDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSLRSS 160

[Close]

BLAST of Carg15752 vs. NCBI nr
Match: XP_022989807.1 (probable calcium-binding protein CML44 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMN 60
           MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNARE+DVDIVYMAFKVFDMN
Sbjct: 43  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREDDVDIVYMAFKVFDMN 102

Query: 61  DDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS 119
           DDGFISCEELQ VLSRLE+WDVN +  DCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS
Sbjct: 103 DDGFISCEELQHVLSRLEIWDVNRSGIDCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS 160

[Close]

BLAST of Carg15752 vs. NCBI nr
Match: XP_023527806.1 (probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-55
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMN 60
           MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVS VNAREED+DIVYMAFKVFDMN
Sbjct: 43  MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSHVNAREEDIDIVYMAFKVFDMN 102

Query: 61  DDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS 119
           DDGFISCEELQLVLSRLELWDVN    DCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS
Sbjct: 103 DDGFISCEELQLVLSRLELWDVN---IDCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS 157

[Close]

BLAST of Carg15752 vs. NCBI nr
Match: XP_022141411.1 (probable calcium-binding protein CML44 [Momordica charantia])

HSP 1 Score: 189.1 bits (479), Expect = 8.5e-45
Identity = 95/125 (76.00%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVS-------DVNAREEDVDIVYMA 60
           ME+L S LEKPSLDFNEFLFFYESISK+NKGEC GGV        D +  EEDVDIVYMA
Sbjct: 42  MEELESSLEKPSLDFNEFLFFYESISKRNKGECNGGVGDDENEMLDGHEGEEDVDIVYMA 101

Query: 61  FKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM 119
           FKVFDMNDDGFISCEEL+ VL RLELWD N +D++C++MIRAYDTNLDG LDFEEFKNMM
Sbjct: 102 FKVFDMNDDGFISCEELRSVLLRLELWDSNRSDSECRNMIRAYDTNLDGKLDFEEFKNMM 161

[Close]

BLAST of Carg15752 vs. NCBI nr
Match: XP_022939513.1 (probable calcium-binding protein CML44 [Cucurbita moschata])

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNA-REEDVDIVYMAFKVFDM 60
           ME+L SFLEKPSLDF+EFLFFYESISKQNKGECKGG+ D +   EEDV+IVYMAFKVFD+
Sbjct: 43  MEELESFLEKPSLDFDEFLFFYESISKQNKGECKGGLVDEHGDEEEDVEIVYMAFKVFDV 102

Query: 61  NDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSLTS 118
           N DGFISCEEL+ VLSRLELWD N ++ DC+SMIRAYDTNLDG LDFEEF NMM  T+
Sbjct: 103 NGDGFISCEELENVLSRLELWDANKSEVDCRSMIRAYDTNLDGKLDFEEFMNMMLFTN 160

[Close]

BLAST of Carg15752 vs. TAIR10
Match: AT1G21550.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 84.3 bits (207), Expect = 5.3e-17
Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 2   EDLHSFLEKPSLDFNEFL-FFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMN 61
           ++L   + K SLD +EFL F+Y+++      + KG   +++   ++ + +  AF VFD+N
Sbjct: 46  DELELIVGKQSLDLDEFLRFYYDAVL-----DSKGSKKNIDVVADNDEAIARAFNVFDVN 105

Query: 62  DDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM 114
            DG+IS EEL+ VL RL  ++      DC  MIR +D NLDG +DFEEFKNM+
Sbjct: 106 GDGYISAEELRDVLERLG-FEEEAKAWDCGRMIRVHDKNLDGFVDFEEFKNMI 152

[Close]

BLAST of Carg15752 vs. TAIR10
Match: AT4G12860.1 (EF hand calcium-binding protein family)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 40  VNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTN 99
           V  +EE+ D +  AF+VFD N DGFI+ EEL+ VL+ + L    T + DCK MI   D +
Sbjct: 70  VEEKEEEED-MREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLE-DCKKMISKVDVD 129

Query: 100 LDGMLDFEEFKNMM 114
            DGM++F+EFK MM
Sbjct: 130 GDGMVNFKEFKQMM 141

[Close]

BLAST of Carg15752 vs. TAIR10
Match: AT5G44460.1 (calmodulin like 43)

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09
Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 9   EKPSLDFNEFLFFYESISKQ---NKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFI 68
           +K  L F++F   ++++ +     +G C  G  + +  E        AF VFD + DGFI
Sbjct: 76  DKTGLRFDDFAALHKTLDESFFGGEGSCCDGSPESDLEE--------AFNVFDEDGDGFI 135

Query: 69  SCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM 114
           S  ELQ VL +L L +    +   + MI + D+N DG +DF EFKNMM
Sbjct: 136 SAVELQKVLKKLGLPEAGEIE-QVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]

BLAST of Carg15752 vs. TAIR10
Match: AT4G20780.1 (calmodulin like 42)

HSP 1 Score: 58.2 bits (139), Expect = 4.1e-09
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 53  AFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNM 112
           AFKVFD N DGFIS  ELQ VL +L L +    +   + MI + D N DG +DF EFKNM
Sbjct: 124 AFKVFDENGDGFISARELQTVLKKLGLPEGGEMER-VEKMIVSVDRNQDGRVDFFEFKNM 183

Query: 113 M 114
           M
Sbjct: 184 M 183

[Close]

BLAST of Carg15752 vs. TAIR10
Match: AT3G29000.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 37/93 (39.78%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 21  FYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELW 80
           FY     Q +   K   S    +E  ++ V  AF VFD N DGFI   ELQ VL+ L   
Sbjct: 98  FYNDDQLQEQYSAKEVSSLFEEKEASLEEVKQAFDVFDENKDGFIDAIELQRVLTILGFK 157

Query: 81  DVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM 114
             +  D +C  MIR+ D N DG +DF EF   M
Sbjct: 158 QGSYLD-NCLVMIRSLDGNKDGKIDFNEFVKFM 189

[Close]

BLAST of Carg15752 vs. Swiss-Prot
Match: sp|Q9LPK5|CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana OX=3702 GN=CML44 PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 9.6e-16
Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 2   EDLHSFLEKPSLDFNEFL-FFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMN 61
           ++L   + K SLD +EFL F+Y+++      + KG   +++   ++ + +  AF VFD+N
Sbjct: 46  DELELIVGKQSLDLDEFLRFYYDAVL-----DSKGSKKNIDVVADNDEAIARAFNVFDVN 105

Query: 62  DDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM 114
            DG+IS EEL+ VL RL  ++      DC  MIR +D NLDG +DFEEFKNM+
Sbjct: 106 GDGYISAEELRDVLERLG-FEEEAKAWDCGRMIRVHDKNLDGFVDFEEFKNMI 152

[Close]

BLAST of Carg15752 vs. Swiss-Prot
Match: sp|Q9SU00|CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-09
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 40  VNAREEDVDIVYMAFKVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTN 99
           V  +EE+ D +  AF+VFD N DGFI+ EEL+ VL+ + L    T + DCK MI   D +
Sbjct: 70  VEEKEEEED-MREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLE-DCKKMISKVDVD 129

Query: 100 LDGMLDFEEFKNMM 114
            DGM++F+EFK MM
Sbjct: 130 GDGMVNFKEFKQMM 141

[Close]

BLAST of Carg15752 vs. Swiss-Prot
Match: sp|Q2QVI1|CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica OX=39947 GN=CML28 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.1e-09
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 13  LDFNEFLFFYESI--------SKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGF 72
           +D  EF   Y SI        + +      GG  +  A +++ + +  AF VFD N DGF
Sbjct: 57  VDVEEFGLLYRSILGDDAAGRAPRTAAAAIGG--EGGAPDDEDEGMREAFNVFDQNGDGF 116

Query: 73  ISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM 114
           I+ +EL+ VLS L L    T D DC+ MI   D + DG +DF+EFK MM
Sbjct: 117 ITVDELRSVLSSLGLKHGRTAD-DCRRMISMVDADGDGRVDFKEFKQMM 162

[Close]

BLAST of Carg15752 vs. Swiss-Prot
Match: sp|Q9FI19|CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08
Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 9   EKPSLDFNEFLFFYESISKQ---NKGECKGGVSDVNAREEDVDIVYMAFKVFDMNDDGFI 68
           +K  L F++F   ++++ +     +G C  G  + +  E        AF VFD + DGFI
Sbjct: 76  DKTGLRFDDFAALHKTLDESFFGGEGSCCDGSPESDLEE--------AFNVFDEDGDGFI 135

Query: 69  SCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM 114
           S  ELQ VL +L L +    +   + MI + D+N DG +DF EFKNMM
Sbjct: 136 SAVELQKVLKKLGLPEAGEIE-QVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]

BLAST of Carg15752 vs. Swiss-Prot
Match: sp|Q09011|CAST_SOLTU (Calcium-binding protein CAST OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-08
Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISK---QNKGECKGGVSDVNAREEDVDIVYMAFKVF 60
           M  LH   E   L F +F   + S++     +K E K G++   A++E    +  AF VF
Sbjct: 80  MVKLHIKPENTGLRFEDFETLHRSLNDVFFGSKCEDKLGLNPDPAQDE--SDLKEAFDVF 139

Query: 61  DMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMM 114
           D N DGFIS +ELQ+VL +L L + +  D   + MI + + + DG +DF EFK+MM
Sbjct: 140 DENGDGFISAKELQVVLEKLGLPEGSEIDR-VEMMISSVEQDHDGRVDFFEFKDMM 192

[Close]

BLAST of Carg15752 vs. TrEMBL
Match: tr|A0A1S3B3T2|A0A1S3B3T2_CUCME (probable calcium-binding protein CML44 OS=Cucumis melo OX=3656 GN=LOC103485689 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 9.9e-42
Identity = 89/120 (74.17%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDV--NAREEDVDIVYMAFKVFD 60
           ME+L SFLEKPSLDF+EFLFFYESISKQNKGECKGGV+    +  E+D +IVYMAFKVFD
Sbjct: 42  MEELESFLEKPSLDFDEFLFFYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFD 101

Query: 61  MNDDGFISCEELQLVLSRLELWDVNTTDTD-CKSMIRAYDTNLDGMLDFEEFKNMMSLTS 118
           MN DGFISC+EL+ VL RLELWD + ++ D C+SMI+AYDTNLDG LDFEEFKNMM LT+
Sbjct: 102 MNGDGFISCDELENVLVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT 161

[Close]

BLAST of Carg15752 vs. TrEMBL
Match: tr|A0A0A0KFQ6|A0A0A0KFQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G376250 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-41
Identity = 88/124 (70.97%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGV------SDVNAREEDVDIVYMAF 60
           ME+L SFLE+PSLDF+EFLFFYESISKQNKGECKGGV      +D +  ++D++IVY+AF
Sbjct: 42  MEELESFLERPSLDFDEFLFFYESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAF 101

Query: 61  KVFDMNDDGFISCEELQLVLSRLELWDVNTTDTD-CKSMIRAYDTNLDGMLDFEEFKNMM 118
           KVFDMN DGFISC+EL+ VL +LELWD + +D D C+SMIRAYDTNLDG LDFEEFKNMM
Sbjct: 102 KVFDMNGDGFISCDELENVLVKLELWDASRSDVDYCRSMIRAYDTNLDGKLDFEEFKNMM 161

[Close]

BLAST of Carg15752 vs. TrEMBL
Match: tr|A0A061FHR5|A0A061FHR5_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_035222 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.0e-27
Identity = 73/124 (58.87%), Postives = 87/124 (70.16%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQN------KGECKGGVSDVNAREEDVDIVYMAF 60
           +E+L SF+ KP LDFNEFLFFY+SIS QN      +    G    +   +ED D+V  AF
Sbjct: 70  LEELGSFVGKPCLDFNEFLFFYDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLV-KAF 129

Query: 61  KVFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMS 119
           KVFD+N DGFISCEELQ VL RL LWD  ++  DC++MI  YDTNLDGM+DFEEFKNMM 
Sbjct: 130 KVFDLNGDGFISCEELQSVLVRLGLWD-ESSGKDCRNMICFYDTNLDGMVDFEEFKNMML 189

[Close]

BLAST of Carg15752 vs. TrEMBL
Match: tr|A0A2I4DSC3|A0A2I4DSC3_9ROSI (probable calcium-binding protein CML44 OS=Juglans regia OX=51240 GN=LOC108983002 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.3e-27
Identity = 73/123 (59.35%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVN--AREED---VDIVYMAFK 60
           +E+L   + KPSLDFNEFLFFY+SIS++N        S+V+  A +ED    D+V  AF+
Sbjct: 42  LEELQPLVGKPSLDFNEFLFFYDSISEKNNINISSSTSEVDLVADQEDDKESDLV-KAFE 101

Query: 61  VFDMNDDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSL 119
           VFD+N DGFIS EELQ VLSRL LWD  ++  DC++MI  YDTNLDG LDFEEFKNMM L
Sbjct: 102 VFDLNGDGFISSEELQDVLSRLGLWD-ESSGRDCRAMIHVYDTNLDGQLDFEEFKNMMFL 161

[Close]

BLAST of Carg15752 vs. TrEMBL
Match: tr|A0A2G2ZPC1|A0A2G2ZPC1_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_12227 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.9e-27
Identity = 71/118 (60.17%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 1   MEDLHSFLEKPSLDFNEFLFFYESISKQNKGECKGGVSDVNAREEDVDIVYMAFKVFDMN 60
           +++L S + K SLDF +FLFFYE++ K+N GE     SDV+ + ED D+V  AFKVFD+N
Sbjct: 142 LDELQSLVGKTSLDFIDFLFFYEAMLKKNYGEEIKEDSDVDNKLED-DLV-EAFKVFDLN 201

Query: 61  DDGFISCEELQLVLSRLELWDVNTTDTDCKSMIRAYDTNLDGMLDFEEFKNMMSLTSS 119
            DGFISCEELQ +LSRL LWD     +DC++MI  YDTNLDG+LDFEEFKNMM L++S
Sbjct: 202 GDGFISCEELQKLLSRLGLWD-EKEGSDCRNMIHMYDTNLDGVLDFEEFKNMMLLSNS 256

The following BLAST results are available for this feature:

BLAST of Carg15752 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959484.1	9.3e-60	98.31	probable calcium-binding protein CML44 [Cucurbita moschata]	[more]
XP_022989807.1	1.6e-56	94.07	probable calcium-binding protein CML44 [Cucurbita maxima]	[more]
XP_023527806.1	1.4e-55	94.92	probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo]	[more]
XP_022141411.1	8.5e-45	76.00	probable calcium-binding protein CML44 [Momordica charantia]	[more]
XP_022939513.1	1.4e-44	77.97	probable calcium-binding protein CML44 [Cucurbita moschata]	[more]

BLAST of Carg15752 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21550.1	5.3e-17	41.59	Calcium-binding EF-hand family protein	[more]
AT4G12860.1	1.3e-10	48.65	EF hand calcium-binding protein family	[more]
AT5G44460.1	1.1e-09	36.11	calmodulin like 43	[more]
AT4G20780.1	4.1e-09	54.10	calmodulin like 42	[more]
AT3G29000.1	1.6e-08	39.78	Calcium-binding EF-hand family protein	[more]

BLAST of Carg15752 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LPK5\|CML44_ARATH	9.6e-16	41.59	Probable calcium-binding protein CML44 OS=Arabidopsis thaliana OX=3702 GN=CML44 ...	[more]
sp\|Q9SU00\|CML2_ARATH	2.3e-09	48.65	Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1	[more]
sp\|Q2QVI1\|CML28_ORYSJ	5.1e-09	38.53	Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q9FI19\|CML43_ARATH	1.9e-08	36.11	Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 ...	[more]
sp\|Q09011\|CAST_SOLTU	5.7e-08	37.93	Calcium-binding protein CAST OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]

BLAST of Carg15752 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B3T2\|A0A1S3B3T2_CUCME	9.9e-42	74.17	probable calcium-binding protein CML44 OS=Cucumis melo OX=3656 GN=LOC103485689 P...	[more]
tr\|A0A0A0KFQ6\|A0A0A0KFQ6_CUCSA	2.2e-41	70.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G376250 PE=4 SV=1	[more]
tr\|A0A061FHR5\|A0A061FHR5_THECC	4.0e-27	58.87	Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_035222 ...	[more]
tr\|A0A2I4DSC3\|A0A2I4DSC3_9ROSI	5.3e-27	59.35	probable calcium-binding protein CML44 OS=Juglans regia OX=51240 GN=LOC108983002...	[more]
tr\|A0A2G2ZPC1\|A0A2G2ZPC1_CAPAN	6.9e-27	60.17	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_12227 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15752-RA	Carg15752-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 49..77 e-value: 0.32 score: 20.1 coord: 88..116 e-value: 3.9E-4 score: 29.8
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 51..113 e-value: 5.1E-10 score: 39.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 45..80 score: 11.863
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 84..118 score: 11.584
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 53..114 e-value: 2.6912E-12 score: 56.7873
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 81..114 e-value: 2.9E-10 score: 41.9
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 9..77 e-value: 5.5E-8 score: 34.7
None	No IPR available	PANTHER	PTHR10891:SF530	CALCIUM-BINDING PROTEIN CML44-RELATED	coord: 2..117
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 2..117
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 58..70
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 11..113

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15752	Cla013901	Watermelon (97103) v1	carwmB0064
Carg15752	Csa6G376250	Cucumber (Chinese Long) v2	carcuB0068
Carg15752	MELO3C008466	Melon (DHL92) v3.5.1	carmeB0066
Carg15752	ClCG08G006060	Watermelon (Charleston Gray)	carwcgB0066
Carg15752	CSPI06G19980	Wild cucumber (PI 183967)	carcpiB0072
Carg15752	Cucsa.328100	Cucumber (Gy14) v1	carcgyB0072
Carg15752	CmaCh15G006470	Cucurbita maxima (Rimu)	carcmaB0087
Carg15752	CmaCh04G023940	Cucurbita maxima (Rimu)	carcmaB0088
Carg15752	CmoCh09G010550	Cucurbita moschata (Rifu)	carcmoB0091
Carg15752	CmoCh15G006570	Cucurbita moschata (Rifu)	carcmoB0092
Carg15752	CmoCh04G025100	Cucurbita moschata (Rifu)	carcmoB0094
Carg15752	Lsi08G004690	Bottle gourd (USVL1VR-Ls)	carlsiB060
Carg15752	Cp4.1LG06g08010	Cucurbita pepo (Zucchini)	carcpeB0097
Carg15752	Cp4.1LG01g20760	Cucurbita pepo (Zucchini)	carcpeB0096
Carg15752	Cp4.1LG13g04330	Cucurbita pepo (Zucchini)	carcpeB0095
Carg15752	CsGy6G019460	Cucumber (Gy14) v2	carcgybB0068
Carg15752	MELO3C008466.2	Melon (DHL92) v3.6.1	carmedB0066
Carg15752	CsaV3_6G034010	Cucumber (Chinese Long) v3	carcucB0074
Carg15752	Cla97C08G148820	Watermelon (97103) v2	carwmbB0063
Carg15752	Bhi04G001477	Wax gourd	carwgoB0078

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15752	Carg01562	Silver-seed gourd	carcarB076

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15752	Cucurbita moschata (Rifu)	carcmoB0093