MELO3C008466 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008466
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Putative calcium-binding protein
Location	chr3 : 7093300 .. 7094097 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACAACAATAATTCCACACGTATTATATATTTTGGTAATAGTCTTTCTTGTGTGTTTACATTTCAATTCTAAACCGAAGAACAAAAAGCACCATGTCTCCAATTAGCTCCAAAGATTTGCATAGGATCTTCAAGAAGCTAGACAAGAACTGTGATGGCCTCCTCTGCCTACAAGAGCTCAAGTGGCTCTTGGATAGGATTGGCATCCAATTAACCATGGAGGAGCTGGAATCATTTCTAGAGAAACCCAGCCTCGACTTCGACGAGTTCTTGTTCTTTTACGAGTCAATATCAAAGCAAAACAAAGGTGAGTGCAAAGGGGGTGTGGCGGGGTGTGTGCAAGATGATCATGAGGATGATACTGAGATTGTATATATGGCTTTTAAAGTGTTTGACATGAATGGTGATGGCTTCATTTCTTGCGACGAGCTCGAAAACGTGTTGGTGAGGCTCGAGCTTTGGGATGCAAGTAGAAGCGAGGTAGATTATTGTAGAAGCATGATCCAAGCTTATGACACCAATTTGGATGGAAAGCTGGATTTTGAGGAGTTTAAGAACATGATGTTGCTCACAACATAGTTCTTCTTTTAGAGTTTCAAAAAAGAAAAGGAAAAAAAAAAAAAATCCCCTTTTTTGTTATATTGTTGTTAAATATAGATATTCGTTTGGTCTGTTTATTTGCAGGTACAATTTGAGAAGCTGGGAGGCTTCAAGAATAAAAATTTTGGTCATGGAGTTCATGTAATTATATTTTTGTTGCTCCAATCAGATTATGTATTTCCACTCTCCTCTATAA

mRNA sequence

ATTGACAACAATAATTCCACACGTATTATATATTTTGGTAATAGTCTTTCTTGTGTGTTTACATTTCAATTCTAAACCGAAGAACAAAAAGCACCATGTCTCCAATTAGCTCCAAAGATTTGCATAGGATCTTCAAGAAGCTAGACAAGAACTGTGATGGCCTCCTCTGCCTACAAGAGCTCAAGTGGCTCTTGGATAGGATTGGCATCCAATTAACCATGGAGGAGCTGGAATCATTTCTAGAGAAACCCAGCCTCGACTTCGACGAGTTCTTGTTCTTTTACGAGTCAATATCAAAGCAAAACAAAGGTGAGTGCAAAGGGGGTGTGGCGGGGTGTGTGCAAGATGATCATGAGGATGATACTGAGATTGTATATATGGCTTTTAAAGTGTTTGACATGAATGGTGATGGCTTCATTTCTTGCGACGAGCTCGAAAACGTGTTGGTGAGGCTCGAGCTTTGGGATGCAAGTAGAAGCGAGGTAGATTATTGTAGAAGCATGATCCAAGCTTATGACACCAATTTGGATGGAAAGCTGGATTTTGAGGAGTTTAAGAACATGATGTTGCTCACAACATAGTTCTTCTTTTAGAGTTTCAAAAAAGAAAAGGAAAAAAAAAAAAAATCCCCTTTTTTGTTATATTGTTGTTAAATATAGATATTCGTTTGGTCTGTTTATTTGCAGGTACAATTTGAGAAGCTGGGAGGCTTCAAGAATAAAAATTTTGGTCATGGAGTTCATGTAATTATATTTTTGTTGCTCCAATCAGATTATGTATTTCCACTCTCCTCTATAA

Coding sequence (CDS)

ATGTCTCCAATTAGCTCCAAAGATTTGCATAGGATCTTCAAGAAGCTAGACAAGAACTGTGATGGCCTCCTCTGCCTACAAGAGCTCAAGTGGCTCTTGGATAGGATTGGCATCCAATTAACCATGGAGGAGCTGGAATCATTTCTAGAGAAACCCAGCCTCGACTTCGACGAGTTCTTGTTCTTTTACGAGTCAATATCAAAGCAAAACAAAGGTGAGTGCAAAGGGGGTGTGGCGGGGTGTGTGCAAGATGATCATGAGGATGATACTGAGATTGTATATATGGCTTTTAAAGTGTTTGACATGAATGGTGATGGCTTCATTTCTTGCGACGAGCTCGAAAACGTGTTGGTGAGGCTCGAGCTTTGGGATGCAAGTAGAAGCGAGGTAGATTATTGTAGAAGCATGATCCAAGCTTATGACACCAATTTGGATGGAAAGCTGGATTTTGAGGAGTTTAAGAACATGATGTTGCTCACAACATAG

Protein sequence

MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFLFFYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT*

Homology

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BLAST of MELO3C008466 vs. Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 1


Query: 4   ISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIG-IQLTMEELESFLEKPSLDFDEFLFF 63
           I++ DL R+FK LDKN DGL+ L EL W+LD++G  + T +ELE  + K SLD DEFL F
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 64  YESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLEL 123
           Y      +KG  K        D   D+ E +  AF VFD+NGDG+IS +EL +VL RL  
Sbjct: 66  YYDAVLDSKGSKKN------IDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERLGF 125

Query: 124 WDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMML 159
            + +++    C  MI+ +D NLDG +DFEEFKNM+L
Sbjct: 126 EEEAKAW--DCGRMIRVHDKNLDGFVDFEEFKNMIL 153

[Close]

BLAST of MELO3C008466 vs. Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.7e-20
Identity = 60/155 (38.71%), Postives = 84/155 (54.19%), Query Frame = 1


Query: 9   LHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFL------EKPSLDFDEFLFF 68
           LHR+F   DKN DG + ++EL   L R+G+     +L+S +      +K  L FD+F   
Sbjct: 29  LHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAAL 88

Query: 69  YESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLEL 128
           ++++ +       GG   C     E D E    AF VFD +GDGFIS  EL+ VL +L L
Sbjct: 89  HKTLDE----SFFGGEGSCCDGSPESDLE---EAFNVFDEDGDGFISAVELQKVLKKLGL 148

Query: 129 WDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMM 158
            +A   E++    MI + D+N DG++DF EFKNMM
Sbjct: 149 PEA--GEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]

BLAST of MELO3C008466 vs. Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.6e-19
Identity = 62/159 (38.99%), Postives = 89/159 (55.97%), Query Frame = 1


Query: 9   LHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEK------PSLDFDEFLFF 68
           L RIF   DKN DG + ++EL   L R+G+   + +L+S +E         L+FD+F   
Sbjct: 30  LQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSL 89

Query: 69  YESISKQNKGECKGGVAGCVQDDH----EDDTEIVYMAFKVFDMNGDGFISCDELENVLV 128
           ++++     G   GG  G  +DD     E+++++   AFKVFD NGDGFIS  EL+ VL 
Sbjct: 90  HKTLDDSFFGGACGG--GENEDDPSSAAENESDLAE-AFKVFDENGDGFISARELQTVLK 149

Query: 129 RLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMM 158
           +L L +    E++    MI + D N DG++DF EFKNMM
Sbjct: 150 KLGLPEG--GEMERVEKMIVSVDRNQDGRVDFFEFKNMM 183

[Close]

BLAST of MELO3C008466 vs. Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 61/168 (36.31%), Postives = 84/168 (50.00%), Query Frame = 1


Query: 4   ISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPS------LDFD 63
           + S +L ++FK  DKN DG +  +EL       GI +  +EL++ ++K        +D +
Sbjct: 1   MDSTELRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVE 60

Query: 64  EFLFFYESI--------SKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFIS 123
           EF   Y SI        + +      GG  G   D+ E   E    AF VFD NGDGFI+
Sbjct: 61  EFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEGMRE----AFNVFDQNGDGFIT 120

Query: 124 CDELENVLVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMM 158
            DEL +VL  L L     +  D CR MI   D + DG++DF+EFK MM
Sbjct: 121 VDELRSVLSSLGLKHGRTA--DDCRRMISMVDADGDGRVDFKEFKQMM 162

[Close]

BLAST of MELO3C008466 vs. Swiss-Prot
Match: ALLB3_BETPN (Calcium-binding allergen Bet v 3 OS=Betula pendula GN=BETVIII PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-17
Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1


Query: 9   LHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLE------KPSLDFDEFLFF 68
           L RIF   DKN DG++ + EL   L+ +G++  + ELES ++         L F++F+  
Sbjct: 41  LRRIFDLFDKNSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL 100

Query: 69  YESISKQNKGECKGGVAGCVQDDHEDDTEIVYMA---------FKVFDMNGDGFISCDEL 128
           ++S++     +      G  +DD+E+D     ++         FKVFD +GDG+IS  EL
Sbjct: 101 HQSLN-----DSYFAYGGEDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYISAREL 160

Query: 129 ENVLVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMM 158
           + VL +L    +  SE+D    MI + D+N DG++DF EFK+MM
Sbjct: 161 QMVLGKLGF--SEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMM 197

[Close]

BLAST of MELO3C008466 vs. TrEMBL
Match: A0A0A0KFQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376250 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 5.2e-80
Identity = 148/165 (89.70%), Postives = 156/165 (94.55%), Query Frame = 1


Query: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60
           M PISSKDLHRIFKKLDKNCDGL+CLQEL WLLD IGIQLTMEELESFLE+PSLDFDEFL
Sbjct: 1   MPPISSKDLHRIFKKLDKNCDGLICLQELNWLLDSIGIQLTMEELESFLERPSLDFDEFL 60

Query: 61  FFYESISKQNKGECKGGVAGCVQDDH----EDDTEIVYMAFKVFDMNGDGFISCDELENV 120
           FFYESISKQNKGECKGGVAGCVQD+     +DD EIVY+AFKVFDMNGDGFISCDELENV
Sbjct: 61  FFYESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAFKVFDMNGDGFISCDELENV 120

Query: 121 LVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT 162
           LV+LELWDASRS+VDYCRSMI+AYDTNLDGKLDFEEFKNMMLLTT
Sbjct: 121 LVKLELWDASRSDVDYCRSMIRAYDTNLDGKLDFEEFKNMMLLTT 165

[Close]

BLAST of MELO3C008466 vs. TrEMBL
Match: A0A061FHR5_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.4e-45
Identity = 100/164 (60.98%), Postives = 124/164 (75.61%), Query Frame = 1


Query: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60
           MSP+S  DL RIF+KLDKN DGL+ L+EL WLL RIG+Q ++EEL SF+ KP LDF+EFL
Sbjct: 29  MSPLSKNDLQRIFEKLDKNGDGLVSLEELNWLLVRIGVQFSLEELGSFVGKPCLDFNEFL 88

Query: 61  FFYESISKQNKGECKGGVAGCVQDD----HEDDTEIVYMAFKVFDMNGDGFISCDELENV 120
           FFY+SIS QN        AG  ++D     ++D+++V  AFKVFD+NGDGFISC+EL++V
Sbjct: 89  FFYDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLV-KAFKVFDLNGDGFISCEELQSV 148

Query: 121 LVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLT 161
           LVRL LWD S  +   CR+MI  YDTNLDG +DFEEFKNMML T
Sbjct: 149 LVRLGLWDESSGK--DCRNMICFYDTNLDGMVDFEEFKNMMLHT 189

[Close]

BLAST of MELO3C008466 vs. TrEMBL
Match: A0A0A0KLD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173500 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-43
Identity = 94/128 (73.44%), Postives = 111/128 (86.72%), Query Frame = 1


Query: 1   MSP-ISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEF 60
           MSP ISS+DL+RIFKKLDKN DGL+CLQELKWL DR+G++LTMEELESFLEKPSLDFD+F
Sbjct: 1   MSPTISSEDLYRIFKKLDKNGDGLICLQELKWLFDRVGVELTMEELESFLEKPSLDFDQF 60

Query: 61  LFFYESISKQNKGEC-KGGVAGCV-QDDHEDDTEIVYMAFKVFDM-NGDGFISCDELENV 120
           LF Y+SISKQNKGEC +  V GC+ +DDHE+D E++ MAFKVF+M + DGFISCD LENV
Sbjct: 61  LFCYKSISKQNKGECEEEDVLGCLEEDDHEEDMEMICMAFKVFEMSDDDGFISCDGLENV 120

Query: 121 LVRLELWD 125
           L RL  +D
Sbjct: 121 LARLNEYD 128

[Close]

BLAST of MELO3C008466 vs. TrEMBL
Match: F6H0H4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01630 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 90/160 (56.25%), Postives = 119/160 (74.38%), Query Frame = 1


Query: 2   SPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFLF 61
           S +SS DLHRIF KLD+N DGL+ L EL WLL+R+G+Q +++ELES +   +LDF+EFL 
Sbjct: 4   SSLSSIDLHRIFHKLDRNGDGLVSLGELNWLLERVGVQYSLDELESLVGNTTLDFNEFLV 63

Query: 62  FYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLE 121
           FYESIS + KGE +       +++ E+D   +  AF+VFD+NGDGFI+CDEL++VL RL 
Sbjct: 64  FYESISTEKKGESEVEEEEVKEEEEEEDVGDLAKAFRVFDLNGDGFITCDELQSVLSRLG 123

Query: 122 LWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT 162
           +W+ +      CRSMI+ YDTN DG LDFEEFKNMMLL+T
Sbjct: 124 MWEENGG--GDCRSMIKVYDTNSDGVLDFEEFKNMMLLST 161

[Close]

BLAST of MELO3C008466 vs. TrEMBL
Match: A0A0D2MEI7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G223000 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 97/172 (56.40%), Postives = 119/172 (69.19%), Query Frame = 1


Query: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60
           MSP+S  DL RIF+KLDKN DGL+ L+EL WLL+RIG+Q ++EELES + KP L F+EFL
Sbjct: 1   MSPLSKNDLRRIFEKLDKNGDGLVSLEELNWLLERIGVQFSLEELESLVGKPCLGFEEFL 60

Query: 61  FFYESISKQN------------KGECKGGVAGCVQDDHEDD--TEIVYMAFKVFDMNGDG 120
           FFY+SIS  N            + E +    G   DD +DD     +  AFKVFD+NGDG
Sbjct: 61  FFYDSISNHNTKIEAAFDDEEEEEEIRMVHGGGDDDDDDDDHGDSDLAKAFKVFDLNGDG 120

Query: 121 FISCDELENVLVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMML 159
           FISC+EL++VLVRL LWD    +   CR+MI  YDTNLDG +DFEEFKNMML
Sbjct: 121 FISCEELQSVLVRLGLWDEKNGK--DCRNMICFYDTNLDGMIDFEEFKNMML 170

[Close]

BLAST of MELO3C008466 vs. TAIR10
Match: AT1G21550.1 (AT1G21550.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 127.5 bits (319), Expect = 7.5e-30
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 1


Query: 4   ISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIG-IQLTMEELESFLEKPSLDFDEFLFF 63
           I++ DL R+FK LDKN DGL+ L EL W+LD++G  + T +ELE  + K SLD DEFL F
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 64  YESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLEL 123
           Y      +KG  K        D   D+ E +  AF VFD+NGDG+IS +EL +VL RL  
Sbjct: 66  YYDAVLDSKGSKKN------IDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERLGF 125

Query: 124 WDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMML 159
            + +++    C  MI+ +D NLDG +DFEEFKNM+L
Sbjct: 126 EEEAKAW--DCGRMIRVHDKNLDGFVDFEEFKNMIL 153

[Close]

BLAST of MELO3C008466 vs. TAIR10
Match: AT5G44460.1 (AT5G44460.1 calmodulin like 43)

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-21
Identity = 60/155 (38.71%), Postives = 84/155 (54.19%), Query Frame = 1


Query: 9   LHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFL------EKPSLDFDEFLFF 68
           LHR+F   DKN DG + ++EL   L R+G+     +L+S +      +K  L FD+F   
Sbjct: 29  LHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAAL 88

Query: 69  YESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLEL 128
           ++++ +       GG   C     E D E    AF VFD +GDGFIS  EL+ VL +L L
Sbjct: 89  HKTLDE----SFFGGEGSCCDGSPESDLE---EAFNVFDEDGDGFISAVELQKVLKKLGL 148

Query: 129 WDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMM 158
            +A   E++    MI + D+N DG++DF EFKNMM
Sbjct: 149 PEA--GEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]

BLAST of MELO3C008466 vs. TAIR10
Match: AT4G20780.1 (AT4G20780.1 calmodulin like 42)

HSP 1 Score: 94.7 bits (234), Expect = 5.4e-20
Identity = 62/159 (38.99%), Postives = 89/159 (55.97%), Query Frame = 1


Query: 9   LHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEK------PSLDFDEFLFF 68
           L RIF   DKN DG + ++EL   L R+G+   + +L+S +E         L+FD+F   
Sbjct: 30  LQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSL 89

Query: 69  YESISKQNKGECKGGVAGCVQDDH----EDDTEIVYMAFKVFDMNGDGFISCDELENVLV 128
           ++++     G   GG  G  +DD     E+++++   AFKVFD NGDGFIS  EL+ VL 
Sbjct: 90  HKTLDDSFFGGACGG--GENEDDPSSAAENESDLAE-AFKVFDENGDGFISARELQTVLK 149

Query: 129 RLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMM 158
           +L L +    E++    MI + D N DG++DF EFKNMM
Sbjct: 150 KLGLPEG--GEMERVEKMIVSVDRNQDGRVDFFEFKNMM 183

[Close]

BLAST of MELO3C008466 vs. TAIR10
Match: AT1G05990.1 (AT1G05990.1 EF hand calcium-binding protein family)

HSP 1 Score: 85.5 bits (210), Expect = 3.3e-17
Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 1


Query: 8   DLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSL------DFDEFLF 67
           +L R+F+  DKN DG +  +EL   L  +GI +  +EL   +EK  +      D DEF  
Sbjct: 5   ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGE 64

Query: 68  FYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLE 127
            Y++I                 D+ +++ E +  AF VFD NGDGFI+ DEL+ VL  L 
Sbjct: 65  LYKTI----------------MDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLG 124

Query: 128 LWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMM 158
           L       +D C+ MI+  D + DG+++++EF+ MM
Sbjct: 125 L--KQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142

[Close]

BLAST of MELO3C008466 vs. TAIR10
Match: AT2G43290.1 (AT2G43290.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16
Identity = 52/160 (32.50%), Postives = 82/160 (51.25%), Query Frame = 1


Query: 4   ISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPS------LDFD 63
           I   +L R+F+  DKN DG +  +EL   L+ +GI +  ++L   + K        +D D
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 64  EFLFFYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVL 123
           EF   Y SI  ++             +D E + E +  AF VFD +GDGFI+ +EL++V+
Sbjct: 121 EFESLYSSIVDEH------------HNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVM 180

Query: 124 VRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMM 158
             L L       +D C+ MI   D + DG+++++EF  MM
Sbjct: 181 ASLGL--KQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMM 206

[Close]

BLAST of MELO3C008466 vs. NCBI nr
Match: gi|659081990|ref|XP_008441608.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis melo])

HSP 1 Score: 332.8 bits (852), Expect = 3.4e-88
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1


Query: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60
           MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL
Sbjct: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60

Query: 61  FFYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRL 120
           FFYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRL
Sbjct: 61  FFYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRL 120

Query: 121 ELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT 162
           ELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT
Sbjct: 121 ELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT 161

[Close]

BLAST of MELO3C008466 vs. NCBI nr
Match: gi|449463432|ref|XP_004149438.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 7.5e-80
Identity = 148/165 (89.70%), Postives = 156/165 (94.55%), Query Frame = 1


Query: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60
           M PISSKDLHRIFKKLDKNCDGL+CLQEL WLLD IGIQLTMEELESFLE+PSLDFDEFL
Sbjct: 1   MPPISSKDLHRIFKKLDKNCDGLICLQELNWLLDSIGIQLTMEELESFLERPSLDFDEFL 60

Query: 61  FFYESISKQNKGECKGGVAGCVQDDH----EDDTEIVYMAFKVFDMNGDGFISCDELENV 120
           FFYESISKQNKGECKGGVAGCVQD+     +DD EIVY+AFKVFDMNGDGFISCDELENV
Sbjct: 61  FFYESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAFKVFDMNGDGFISCDELENV 120

Query: 121 LVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT 162
           LV+LELWDASRS+VDYCRSMI+AYDTNLDGKLDFEEFKNMMLLTT
Sbjct: 121 LVKLELWDASRSDVDYCRSMIRAYDTNLDGKLDFEEFKNMMLLTT 165

[Close]

BLAST of MELO3C008466 vs. NCBI nr
Match: gi|590599643|ref|XP_007019238.1| (Calcium-binding EF-hand family protein [Theobroma cacao])

HSP 1 Score: 188.7 bits (478), Expect = 7.8e-45
Identity = 100/164 (60.98%), Postives = 124/164 (75.61%), Query Frame = 1


Query: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60
           MSP+S  DL RIF+KLDKN DGL+ L+EL WLL RIG+Q ++EEL SF+ KP LDF+EFL
Sbjct: 29  MSPLSKNDLQRIFEKLDKNGDGLVSLEELNWLLVRIGVQFSLEELGSFVGKPCLDFNEFL 88

Query: 61  FFYESISKQNKGECKGGVAGCVQDD----HEDDTEIVYMAFKVFDMNGDGFISCDELENV 120
           FFY+SIS QN        AG  ++D     ++D+++V  AFKVFD+NGDGFISC+EL++V
Sbjct: 89  FFYDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLV-KAFKVFDLNGDGFISCEELQSV 148

Query: 121 LVRLELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLT 161
           LVRL LWD S  +   CR+MI  YDTNLDG +DFEEFKNMML T
Sbjct: 149 LVRLGLWDESSGK--DCRNMICFYDTNLDGMVDFEEFKNMMLHT 189

[Close]

BLAST of MELO3C008466 vs. NCBI nr
Match: gi|778700636|ref|XP_004143706.2| (PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 3.3e-43
Identity = 94/128 (73.44%), Postives = 111/128 (86.72%), Query Frame = 1


Query: 1   MSP-ISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEF 60
           MSP ISS+DL+RIFKKLDKN DGL+CLQELKWL DR+G++LTMEELESFLEKPSLDFD+F
Sbjct: 1   MSPTISSEDLYRIFKKLDKNGDGLICLQELKWLFDRVGVELTMEELESFLEKPSLDFDQF 60

Query: 61  LFFYESISKQNKGEC-KGGVAGCV-QDDHEDDTEIVYMAFKVFDM-NGDGFISCDELENV 120
           LF Y+SISKQNKGEC +  V GC+ +DDHE+D E++ MAFKVF+M + DGFISCD LENV
Sbjct: 61  LFCYKSISKQNKGECEEEDVLGCLEEDDHEEDMEMICMAFKVFEMSDDDGFISCDGLENV 120

Query: 121 LVRLELWD 125
           L RL  +D
Sbjct: 121 LARLNEYD 128

[Close]

BLAST of MELO3C008466 vs. NCBI nr
Match: gi|225459681|ref|XP_002285886.1| (PREDICTED: probable calcium-binding protein CML44 [Vitis vinifera])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 90/160 (56.25%), Postives = 119/160 (74.38%), Query Frame = 1


Query: 2   SPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFLF 61
           S +SS DLHRIF KLD+N DGL+ L EL WLL+R+G+Q +++ELES +   +LDF+EFL 
Sbjct: 4   SSLSSIDLHRIFHKLDRNGDGLVSLGELNWLLERVGVQYSLDELESLVGNTTLDFNEFLV 63

Query: 62  FYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRLE 121
           FYESIS + KGE +       +++ E+D   +  AF+VFD+NGDGFI+CDEL++VL RL 
Sbjct: 64  FYESISTEKKGESEVEEEEVKEEEEEEDVGDLAKAFRVFDLNGDGFITCDELQSVLSRLG 123

Query: 122 LWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT 162
           +W+ +      CRSMI+ YDTN DG LDFEEFKNMMLL+T
Sbjct: 124 MWEENGG--GDCRSMIKVYDTNSDGVLDFEEFKNMMLLST 161

The following BLAST results are available for this feature:

BLAST of MELO3C008466 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML44_ARATH	1.3e-28	47.44	Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=...	[more]
CML43_ARATH	6.7e-20	38.71	Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=...	[more]
CML42_ARATH	9.6e-19	38.99	Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1	[more]
CML28_ORYSJ	1.8e-17	36.31	Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 ...	[more]
ALLB3_BETPN	4.0e-17	34.76	Calcium-binding allergen Bet v 3 OS=Betula pendula GN=BETVIII PE=1 SV=1	[more]

BLAST of MELO3C008466 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFQ6_CUCSA	5.2e-80	89.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376250 PE=4 SV=1	[more]
A0A061FHR5_THECC	5.4e-45	60.98	Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=...	[more]
A0A0A0KLD7_CUCSA	2.3e-43	73.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173500 PE=4 SV=1	[more]
F6H0H4_VITVI	1.1e-42	56.25	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01630 PE=4 SV=...	[more]
A0A0D2MEI7_GOSRA	1.5e-42	56.40	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G223000 PE=4 SV=1	[more]

BLAST of MELO3C008466 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21550.1	7.5e-30	47.44	Calcium-binding EF-hand family protein	[more]
AT5G44460.1	3.8e-21	38.71	calmodulin like 43	[more]
AT4G20780.1	5.4e-20	38.99	calmodulin like 42	[more]
AT1G05990.1	3.3e-17	34.62	EF hand calcium-binding protein family	[more]
AT2G43290.1	2.1e-16	32.50	Calcium-binding EF-hand family protein	[more]

BLAST of MELO3C008466 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081990\|ref\|XP_008441608.1\|	3.4e-88	100.00	PREDICTED: probable calcium-binding protein CML44 [Cucumis melo]	[more]
gi\|449463432\|ref\|XP_004149438.1\|	7.5e-80	89.70	PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus]	[more]
gi\|590599643\|ref\|XP_007019238.1\|	7.8e-45	60.98	Calcium-binding EF-hand family protein [Theobroma cacao]	[more]
gi\|778700636\|ref\|XP_004143706.2\|	3.3e-43	73.44	PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus]	[more]
gi\|225459681\|ref\|XP_002285886.1\|	1.6e-42	56.25	PREDICTED: probable calcium-binding protein CML44 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008466T1	MELO3C008466T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 12..30 score: 0.
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 94..157 score: 1.
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 132..160 score: 0.01coord: 92..120 score: 0.037coord: 8..36 score: 0
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 4..39 score: 11.863coord: 88..123 score: 12.365coord: 128..161 score: 13
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 4..41 score: 6.1E-10coord: 96..109 score: 6.1E-10coord: 110..157 score: 2.1E-17coord: 53..95 score: 1.
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 5..158 score: 4.67
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 17..29 score: -coord: 101..113 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 84..158 score: 7.1E-49coord: 1..67 score: 7.1
None	No IPR available	PANTHER	PTHR10891:SF530	SUBFAMILY NOT NAMED	coord: 1..67 score: 7.1E-49coord: 84..158 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008466	Csa6G376250	Cucumber (Chinese Long) v2	cumeB473
MELO3C008466	Cla013901	Watermelon (97103) v1	mewmB309
MELO3C008466	ClCG08G006060	Watermelon (Charleston Gray)	mewcgB301
MELO3C008466	Cla97C08G148820	Watermelon (97103) v2	mewmbB308
MELO3C008466	Bhi04G001477	Wax gourd	mewgoB323
MELO3C008466	CSPI06G19980	Wild cucumber (PI 183967)	cpimeB466
MELO3C008466	Cucsa.328100	Cucumber (Gy14) v1	cgymeB540
MELO3C008466	CmaCh15G006470	Cucurbita maxima (Rimu)	cmameB268
MELO3C008466	CmaCh04G023940	Cucurbita maxima (Rimu)	cmameB680
MELO3C008466	CmoCh04G025100	Cucurbita moschata (Rifu)	cmomeB672
MELO3C008466	CmoCh15G006570	Cucurbita moschata (Rifu)	cmomeB259
MELO3C008466	Lsi08G004690	Bottle gourd (USVL1VR-Ls)	lsimeB475
MELO3C008466	Cp4.1LG13g04330	Cucurbita pepo (Zucchini)	cpemeB168
MELO3C008466	Cp4.1LG01g20760	Cucurbita pepo (Zucchini)	cpemeB401
MELO3C008466	CsGy6G019460	Cucumber (Gy14) v2	cgybmeB408
MELO3C008466	Carg01562	Silver-seed gourd	carmeB0824
MELO3C008466	Carg15752	Silver-seed gourd	carmeB0066
MELO3C008466	CsaV3_6G034010	Cucumber (Chinese Long) v3	cucmeB477

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None