ClCG08G006060 (gene) Watermelon (Charleston Gray)

Overview
NameClCG08G006060
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionCalmodulin-like protein
LocationCG_Chr08 : 18337374 .. 18337859 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCTATTAGCTCCAACGACTTGCACAGGATCTTCAAGAAGCTAGACAAGAACGGCGATGGCCTCATTTGCTTGCAAGAGCTCAAGTGGCTCTTGGATAGGATTGGCATCCAATTAACCATGGAGGAGTTGGAGTCATTTCTAGAGAAACCGAGCCTCAACTTTGATGAATTCTTGTTCTTTTACGAGTCGATATCGAAGCAAAACAAAGGTGAGTGCAAAGGGGGTGAGGGATGTGTGGAAGATGATGATCATGAGGAAGATATGGAGATTGTATATATGGCTTTCAAAGTGTTTGACATGAATGGTGATGGCTTCATTTCTTGCGACGAGCTCGAAAACGTGTTGTCGAGGCTCGAGCTTTGGGACGCAAATAGAAGCGATGTCGATTATTATAGAAGTATGATCCGAGCTTATGACACCAATTTGGATGGGAAGCTGGATTTTGAGGAGTTTAAGAACATGATGTTGCTCACAACATAG

mRNA sequence

ATGGCTCCTATTAGCTCCAACGACTTGCACAGGATCTTCAAGAAGCTAGACAAGAACGGCGATGGCCTCATTTGCTTGCAAGAGCTCAAGTGGCTCTTGGATAGGATTGGCATCCAATTAACCATGGAGGAGTTGGAGTCATTTCTAGAGAAACCGAGCCTCAACTTTGATGAATTCTTGTTCTTTTACGAGTCGATATCGAAGCAAAACAAAGGTGAGTGCAAAGGGGGTGAGGGATGTGTGGAAGATGATGATCATGAGGAAGATATGGAGATTGTATATATGGCTTTCAAAGTGTTTGACATGAATGGTGATGGCTTCATTTCTTGCGACGAGCTCGAAAACGTGTTGTCGAGGCTCGAGCTTTGGGACGCAAATAGAAGCGATGTCGATTATTATAGAAGTATGATCCGAGCTTATGACACCAATTTGGATGGGAAGCTGGATTTTGAGGAGTTTAAGAACATGATGTTGCTCACAACATAG

Coding sequence (CDS)

ATGGCTCCTATTAGCTCCAACGACTTGCACAGGATCTTCAAGAAGCTAGACAAGAACGGCGATGGCCTCATTTGCTTGCAAGAGCTCAAGTGGCTCTTGGATAGGATTGGCATCCAATTAACCATGGAGGAGTTGGAGTCATTTCTAGAGAAACCGAGCCTCAACTTTGATGAATTCTTGTTCTTTTACGAGTCGATATCGAAGCAAAACAAAGGTGAGTGCAAAGGGGGTGAGGGATGTGTGGAAGATGATGATCATGAGGAAGATATGGAGATTGTATATATGGCTTTCAAAGTGTTTGACATGAATGGTGATGGCTTCATTTCTTGCGACGAGCTCGAAAACGTGTTGTCGAGGCTCGAGCTTTGGGACGCAAATAGAAGCGATGTCGATTATTATAGAAGTATGATCCGAGCTTATGACACCAATTTGGATGGGAAGCTGGATTTTGAGGAGTTTAAGAACATGATGTTGCTCACAACATAG

Protein sequence

MAPISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEFLFFYESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRLELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLTT
Homology
[Close]
BLAST of ClCG08G006060 vs. Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 9.2e-30
Identity = 76/162 (46.91%), Postives = 99/162 (61.11%), Query Frame = 1 

Query: 4   ISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIG-IQLTMEELESFLEKPSLNFDEFLFF 63
           I++NDL R+FK LDKN DGL+ L EL W+LD++G  + T +ELE  + K SL+ DEFL F
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 64  YESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRL-- 123
           Y      +KG  K  +   ++D      E +  AF VFD+NGDG+IS +EL +VL RL  
Sbjct: 66  YYDAVLDSKGSKKNIDVVADND------EAIARAFNVFDVNGDGYISAEELRDVLERLGF 125

Query: 124 ----ELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMML 159
               + WD  R        MIR +D NLDG +DFEEFKNM+L
Sbjct: 126 EEEAKAWDCGR--------MIRVHDKNLDGFVDFEEFKNMIL 153

[Close]
BLAST of ClCG08G006060 vs. Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.2e-22
Identity = 63/156 (40.38%), Postives = 86/156 (55.13%), Query Frame = 1 

Query: 9   LHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEK------PSLNFDEFLFF 68
           L RIF   DKNGDG I ++EL   L R+G+   + +L+S +E         LNFD+F   
Sbjct: 30  LQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSL 89

Query: 69  YESISKQN-KGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRLE 128
           ++++      G C GGE   +     E+   +  AFKVFD NGDGFIS  EL+ VL +L 
Sbjct: 90  HKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVLKKLG 149

Query: 129 LWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMM 158
           L +    +++    MI + D N DG++DF EFKNMM
Sbjct: 150 LPEG--GEMERVEKMIVSVDRNQDGRVDFFEFKNMM 183

[Close]
BLAST of ClCG08G006060 vs. Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 1 

Query: 9   LHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFL------EKPSLNFDEFLFF 68
           LHR+F   DKN DG I ++EL   L R+G+     +L+S +      +K  L FD+F   
Sbjct: 29  LHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAAL 88

Query: 69  YESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRLEL 128
           ++++ +       GGEG   D   E D+E    AF VFD +GDGFIS  EL+ VL +L L
Sbjct: 89  HKTLDE----SFFGGEGSCCDGSPESDLE---EAFNVFDEDGDGFISAVELQKVLKKLGL 148

Query: 129 WDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMM 158
            +A   +++    MI + D+N DG++DF EFKNMM
Sbjct: 149 PEA--GEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]
BLAST of ClCG08G006060 vs. Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 66/168 (39.29%), Postives = 85/168 (50.60%), Query Frame = 1 

Query: 4   ISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFD------ 63
           + S +L ++FK  DKNGDG I  +EL       GI +  +EL++ ++K   N D      
Sbjct: 1   MDSTELRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVE 60

Query: 64  EFLFFYESI--------SKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFIS 123
           EF   Y SI        + +      GGEG   DD+ E   E    AF VFD NGDGFI+
Sbjct: 61  EFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEGMRE----AFNVFDQNGDGFIT 120

Query: 124 CDELENVLSRLELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMM 158
            DEL +VLS L L   +    D  R MI   D + DG++DF+EFK MM
Sbjct: 121 VDELRSVLSSLGL--KHGRTADDCRRMISMVDADGDGRVDFKEFKQMM 162

[Close]
BLAST of ClCG08G006060 vs. Swiss-Prot
Match: ALLB3_BETPN (Calcium-binding allergen Bet v 3 OS=Betula pendula GN=BETVIII PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-19
Identity = 61/164 (37.20%), Postives = 93/164 (56.71%), Query Frame = 1 

Query: 9   LHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLE------KPSLNFDEFLFF 68
           L RIF   DKN DG+I + EL   L+ +G++  + ELES ++         L F++F+  
Sbjct: 41  LRRIFDLFDKNSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISL 100

Query: 69  YESISKQNKGECKGGEGCVEDDDHEEDMEIVYMA---------FKVFDMNGDGFISCDEL 128
           ++S++  +     GGE   ++DD+EEDM    ++         FKVFD +GDG+IS  EL
Sbjct: 101 HQSLN--DSYFAYGGE---DEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYISAREL 160

Query: 129 ENVLSRLELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMM 158
           + VL +L    +  S++D    MI + D+N DG++DF EFK+MM
Sbjct: 161 QMVLGKLGF--SEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMM 197

[Close]
BLAST of ClCG08G006060 vs. TrEMBL
Match: A0A0A0KFQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376250 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 9.5e-74
Identity = 142/165 (86.06%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 1   MAPISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEFL 60
           M PISS DLHRIFKKLDKN DGLICLQEL WLLD IGIQLTMEELESFLE+PSL+FDEFL
Sbjct: 1   MPPISSKDLHRIFKKLDKNCDGLICLQELNWLLDSIGIQLTMEELESFLERPSLDFDEFL 60

Query: 61  FFYESISKQNKGECKGG-EGCV---EDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENV 120
           FFYESISKQNKGECKGG  GCV   ++D  ++DMEIVY+AFKVFDMNGDGFISCDELENV
Sbjct: 61  FFYESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAFKVFDMNGDGFISCDELENV 120

Query: 121 LSRLELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLTT 162
           L +LELWDA+RSDVDY RSMIRAYDTNLDGKLDFEEFKNMMLLTT
Sbjct: 121 LVKLELWDASRSDVDYCRSMIRAYDTNLDGKLDFEEFKNMMLLTT 165

[Close]
BLAST of ClCG08G006060 vs. TrEMBL
Match: A0A0A0KLD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173500 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.2e-46
Identity = 96/128 (75.00%), Postives = 114/128 (89.06%), Query Frame = 1 

Query: 1   MAP-ISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEF 60
           M+P ISS DL+RIFKKLDKNGDGLICLQELKWL DR+G++LTMEELESFLEKPSL+FD+F
Sbjct: 1   MSPTISSEDLYRIFKKLDKNGDGLICLQELKWLFDRVGVELTMEELESFLEKPSLDFDQF 60

Query: 61  LFFYESISKQNKGECKGGE--GCVEDDDHEEDMEIVYMAFKVFDM-NGDGFISCDELENV 120
           LF Y+SISKQNKGEC+  +  GC+E+DDHEEDME++ MAFKVF+M + DGFISCD LENV
Sbjct: 61  LFCYKSISKQNKGECEEEDVLGCLEEDDHEEDMEMICMAFKVFEMSDDDGFISCDGLENV 120

Query: 121 LSRLELWD 125
           L+RL  +D
Sbjct: 121 LARLNEYD 128

[Close]
BLAST of ClCG08G006060 vs. TrEMBL
Match: F6H0H4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01630 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.4e-45
Identity = 93/158 (58.86%), Postives = 123/158 (77.85%), Query Frame = 1 

Query: 4   ISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEFLFFY 63
           +SS DLHRIF KLD+NGDGL+ L EL WLL+R+G+Q +++ELES +   +L+F+EFL FY
Sbjct: 6   LSSIDLHRIFHKLDRNGDGLVSLGELNWLLERVGVQYSLDELESLVGNTTLDFNEFLVFY 65

Query: 64  ESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRLELW 123
           ESIS + KGE +  E  V++++ EED+  +  AF+VFD+NGDGFI+CDEL++VLSRL +W
Sbjct: 66  ESISTEKKGESEVEEEEVKEEEEEEDVGDLAKAFRVFDLNGDGFITCDELQSVLSRLGMW 125

Query: 124 DANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLTT 162
           + N       RSMI+ YDTN DG LDFEEFKNMMLL+T
Sbjct: 126 EENGG--GDCRSMIKVYDTNSDGVLDFEEFKNMMLLST 161

[Close]
BLAST of ClCG08G006060 vs. TrEMBL
Match: A0A061FHR5_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43
Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 1 

Query: 1   MAPISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEFL 60
           M+P+S NDL RIF+KLDKNGDGL+ L+EL WLL RIG+Q ++EEL SF+ KP L+F+EFL
Sbjct: 29  MSPLSKNDLQRIFEKLDKNGDGLVSLEELNWLLVRIGVQFSLEELGSFVGKPCLDFNEFL 88

Query: 61  FFYESISKQN-KGECKGGEGCVEDD---DHEEDMEIVYMAFKVFDMNGDGFISCDELENV 120
           FFY+SIS QN  G+     G  E+D     +ED ++V  AFKVFD+NGDGFISC+EL++V
Sbjct: 89  FFYDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLV-KAFKVFDLNGDGFISCEELQSV 148

Query: 121 LSRLELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLT 161
           L RL LWD   S     R+MI  YDTNLDG +DFEEFKNMML T
Sbjct: 149 LVRLGLWD--ESSGKDCRNMICFYDTNLDGMVDFEEFKNMMLHT 189

[Close]
BLAST of ClCG08G006060 vs. TrEMBL
Match: W9RRJ8_9ROSA (Putative calcium-binding protein CML44 OS=Morus notabilis GN=L484_003448 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43
Identity = 101/169 (59.76%), Postives = 126/169 (74.56%), Query Frame = 1 

Query: 1   MAPISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQ---LTMEELESFLEKPSLNFD 60
           M  +S+NDL+RIFKKLDKNGDGL+ + EL WLL+RIG+    +++ ELES + K SL+FD
Sbjct: 1   MCSLSANDLNRIFKKLDKNGDGLVSVDELNWLLERIGVDIQLISLTELESLVGKSSLSFD 60

Query: 61  EFLFFYESISKQNKGECKGGEGCVEDDDHE-----EDMEIVYMAFKVFDMNGDGFISCDE 120
           EFLFFY+SIS  N GE KGG+   +D DH+     ED ++V  AFKVFD+N DGFISC+E
Sbjct: 61  EFLFFYKSISNPNNGESKGGD-IDQDQDHDHDHDGEDSDLV-KAFKVFDINDDGFISCEE 120

Query: 121 LENVLSRLELW-DANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLT 161
           L++VL RL L  D N S  D  +SMI A+D N DG+LDFEEFKNMMLLT
Sbjct: 121 LQSVLIRLGLMEDHNSSGRDNCKSMIGAFDANSDGQLDFEEFKNMMLLT 167

[Close]
BLAST of ClCG08G006060 vs. TAIR10
Match: AT1G21550.1 (AT1G21550.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 131.3 bits (329), Expect = 5.2e-31
Identity = 76/162 (46.91%), Postives = 99/162 (61.11%), Query Frame = 1 

Query: 4   ISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIG-IQLTMEELESFLEKPSLNFDEFLFF 63
           I++NDL R+FK LDKN DGL+ L EL W+LD++G  + T +ELE  + K SL+ DEFL F
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 64  YESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRL-- 123
           Y      +KG  K  +   ++D      E +  AF VFD+NGDG+IS +EL +VL RL  
Sbjct: 66  YYDAVLDSKGSKKNIDVVADND------EAIARAFNVFDVNGDGYISAEELRDVLERLGF 125

Query: 124 ----ELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMML 159
               + WD  R        MIR +D NLDG +DFEEFKNM+L
Sbjct: 126 EEEAKAWDCGR--------MIRVHDKNLDGFVDFEEFKNMIL 153

[Close]
BLAST of ClCG08G006060 vs. TAIR10
Match: AT4G20780.1 (AT4G20780.1 calmodulin like 42)

HSP 1 Score: 104.8 bits (260), Expect = 5.2e-23
Identity = 63/156 (40.38%), Postives = 86/156 (55.13%), Query Frame = 1 

Query: 9   LHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEK------PSLNFDEFLFF 68
           L RIF   DKNGDG I ++EL   L R+G+   + +L+S +E         LNFD+F   
Sbjct: 30  LQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSL 89

Query: 69  YESISKQN-KGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRLE 128
           ++++      G C GGE   +     E+   +  AFKVFD NGDGFIS  EL+ VL +L 
Sbjct: 90  HKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVLKKLG 149

Query: 129 LWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMM 158
           L +    +++    MI + D N DG++DF EFKNMM
Sbjct: 150 LPEG--GEMERVEKMIVSVDRNQDGRVDFFEFKNMM 183

[Close]
BLAST of ClCG08G006060 vs. TAIR10
Match: AT5G44460.1 (AT5G44460.1 calmodulin like 43)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 1 

Query: 9   LHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFL------EKPSLNFDEFLFF 68
           LHR+F   DKN DG I ++EL   L R+G+     +L+S +      +K  L FD+F   
Sbjct: 29  LHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAAL 88

Query: 69  YESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRLEL 128
           ++++ +       GGEG   D   E D+E    AF VFD +GDGFIS  EL+ VL +L L
Sbjct: 89  HKTLDE----SFFGGEGSCCDGSPESDLE---EAFNVFDEDGDGFISAVELQKVLKKLGL 148

Query: 129 WDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMM 158
            +A   +++    MI + D+N DG++DF EFKNMM
Sbjct: 149 PEA--GEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]
BLAST of ClCG08G006060 vs. TAIR10
Match: AT1G05990.1 (AT1G05990.1 EF hand calcium-binding protein family)

HSP 1 Score: 92.0 bits (227), Expect = 3.5e-19
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 1 

Query: 8   DLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLN------FDEFLF 67
           +L R+F+  DKNGDG I  +EL   L  +GI +  +EL   +EK  +N       DEF  
Sbjct: 5   ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGE 64

Query: 68  FYESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRLE 127
            Y++I               E+D+ EEDM+    AF VFD NGDGFI+ DEL+ VLS L 
Sbjct: 65  LYKTIMD-------------EEDEEEEDMK---EAFNVFDQNGDGFITVDELKAVLSSLG 124

Query: 128 LWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMM 158
           L       +D  + MI+  D + DG+++++EF+ MM
Sbjct: 125 L--KQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142

[Close]
BLAST of ClCG08G006060 vs. TAIR10
Match: AT4G03290.1 (AT4G03290.1 EF hand calcium-binding protein family)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17
Identity = 58/160 (36.25%), Postives = 86/160 (53.75%), Query Frame = 1 

Query: 4   ISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFD------ 63
           + S +L+R+F+  DK+GDG I  +EL      +GI +  +EL   ++K  +N D      
Sbjct: 1   MDSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIE 60

Query: 64  EFLFFYESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVL 123
           EF   Y++I  ++           ED+  EEDM+    AF VFD NGDGFI+ DEL+ VL
Sbjct: 61  EFGELYKTIMVED-----------EDEVGEEDMK---EAFNVFDRNGDGFITVDELKAVL 120

Query: 124 SRLELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMM 158
           S L L       ++  R MI   D + DG++++ EF+ MM
Sbjct: 121 SSLGL--KQGKTLEECRKMIMQVDVDGDGRVNYMEFRQMM 144

[Close]
BLAST of ClCG08G006060 vs. NCBI nr
Match: gi|659081990|ref|XP_008441608.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-76
Identity = 146/162 (90.12%), Postives = 154/162 (95.06%), Query Frame = 1 

Query: 1   MAPISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEFL 60
           M+PISS DLHRIFKKLDKN DGL+CLQELKWLLDRIGIQLTMEELESFLEKPSL+FDEFL
Sbjct: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60

Query: 61  FFYESISKQNKGECKGG-EGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSR 120
           FFYESISKQNKGECKGG  GCV+ DDHE+D EIVYMAFKVFDMNGDGFISCDELENVL R
Sbjct: 61  FFYESISKQNKGECKGGVAGCVQ-DDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVR 120

Query: 121 LELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLTT 162
           LELWDA+RS+VDY RSMI+AYDTNLDGKLDFEEFKNMMLLTT
Sbjct: 121 LELWDASRSEVDYCRSMIQAYDTNLDGKLDFEEFKNMMLLTT 161

[Close]
BLAST of ClCG08G006060 vs. NCBI nr
Match: gi|449463432|ref|XP_004149438.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 1.4e-73
Identity = 142/165 (86.06%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 1   MAPISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEFL 60
           M PISS DLHRIFKKLDKN DGLICLQEL WLLD IGIQLTMEELESFLE+PSL+FDEFL
Sbjct: 1   MPPISSKDLHRIFKKLDKNCDGLICLQELNWLLDSIGIQLTMEELESFLERPSLDFDEFL 60

Query: 61  FFYESISKQNKGECKGG-EGCV---EDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENV 120
           FFYESISKQNKGECKGG  GCV   ++D  ++DMEIVY+AFKVFDMNGDGFISCDELENV
Sbjct: 61  FFYESISKQNKGECKGGVAGCVQDNDNDQGQDDMEIVYLAFKVFDMNGDGFISCDELENV 120

Query: 121 LSRLELWDANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLTT 162
           L +LELWDA+RSDVDY RSMIRAYDTNLDGKLDFEEFKNMMLLTT
Sbjct: 121 LVKLELWDASRSDVDYCRSMIRAYDTNLDGKLDFEEFKNMMLLTT 165

[Close]
BLAST of ClCG08G006060 vs. NCBI nr
Match: gi|778700636|ref|XP_004143706.2| (PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-46
Identity = 96/128 (75.00%), Postives = 114/128 (89.06%), Query Frame = 1 

Query: 1   MAP-ISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEF 60
           M+P ISS DL+RIFKKLDKNGDGLICLQELKWL DR+G++LTMEELESFLEKPSL+FD+F
Sbjct: 1   MSPTISSEDLYRIFKKLDKNGDGLICLQELKWLFDRVGVELTMEELESFLEKPSLDFDQF 60

Query: 61  LFFYESISKQNKGECKGGE--GCVEDDDHEEDMEIVYMAFKVFDM-NGDGFISCDELENV 120
           LF Y+SISKQNKGEC+  +  GC+E+DDHEEDME++ MAFKVF+M + DGFISCD LENV
Sbjct: 61  LFCYKSISKQNKGECEEEDVLGCLEEDDHEEDMEMICMAFKVFEMSDDDGFISCDGLENV 120

Query: 121 LSRLELWD 125
           L+RL  +D
Sbjct: 121 LARLNEYD 128

[Close]
BLAST of ClCG08G006060 vs. NCBI nr
Match: gi|225459681|ref|XP_002285886.1| (PREDICTED: probable calcium-binding protein CML44 [Vitis vinifera])

HSP 1 Score: 188.7 bits (478), Expect = 7.8e-45
Identity = 93/158 (58.86%), Postives = 123/158 (77.85%), Query Frame = 1 

Query: 4   ISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQLTMEELESFLEKPSLNFDEFLFFY 63
           +SS DLHRIF KLD+NGDGL+ L EL WLL+R+G+Q +++ELES +   +L+F+EFL FY
Sbjct: 6   LSSIDLHRIFHKLDRNGDGLVSLGELNWLLERVGVQYSLDELESLVGNTTLDFNEFLVFY 65

Query: 64  ESISKQNKGECKGGEGCVEDDDHEEDMEIVYMAFKVFDMNGDGFISCDELENVLSRLELW 123
           ESIS + KGE +  E  V++++ EED+  +  AF+VFD+NGDGFI+CDEL++VLSRL +W
Sbjct: 66  ESISTEKKGESEVEEEEVKEEEEEEDVGDLAKAFRVFDLNGDGFITCDELQSVLSRLGMW 125

Query: 124 DANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLTT 162
           + N       RSMI+ YDTN DG LDFEEFKNMMLL+T
Sbjct: 126 EENGG--GDCRSMIKVYDTNSDGVLDFEEFKNMMLLST 161

[Close]
BLAST of ClCG08G006060 vs. NCBI nr
Match: gi|703133631|ref|XP_010105440.1| (putative calcium-binding protein CML44 [Morus notabilis])

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-43
Identity = 101/169 (59.76%), Postives = 126/169 (74.56%), Query Frame = 1 

Query: 1   MAPISSNDLHRIFKKLDKNGDGLICLQELKWLLDRIGIQ---LTMEELESFLEKPSLNFD 60
           M  +S+NDL+RIFKKLDKNGDGL+ + EL WLL+RIG+    +++ ELES + K SL+FD
Sbjct: 1   MCSLSANDLNRIFKKLDKNGDGLVSVDELNWLLERIGVDIQLISLTELESLVGKSSLSFD 60

Query: 61  EFLFFYESISKQNKGECKGGEGCVEDDDHE-----EDMEIVYMAFKVFDMNGDGFISCDE 120
           EFLFFY+SIS  N GE KGG+   +D DH+     ED ++V  AFKVFD+N DGFISC+E
Sbjct: 61  EFLFFYKSISNPNNGESKGGD-IDQDQDHDHDHDGEDSDLV-KAFKVFDINDDGFISCEE 120

Query: 121 LENVLSRLELW-DANRSDVDYYRSMIRAYDTNLDGKLDFEEFKNMMLLT 161
           L++VL RL L  D N S  D  +SMI A+D N DG+LDFEEFKNMMLLT
Sbjct: 121 LQSVLIRLGLMEDHNSSGRDNCKSMIGAFDANSDGQLDFEEFKNMMLLT 167

The following BLAST results are available for this feature:
BLAST of ClCG08G006060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML44_ARATH9.2e-3046.91Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=... [more]
CML42_ARATH9.2e-2240.38Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1[more]
CML43_ARATH2.1e-2140.00Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=... [more]
CML28_ORYSJ1.9e-1939.29Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 ... [more]
ALLB3_BETPN3.3e-1937.20Calcium-binding allergen Bet v 3 OS=Betula pendula GN=BETVIII PE=1 SV=1[more]
BLAST of ClCG08G006060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFQ6_CUCSA9.5e-7486.06Uncharacterized protein OS=Cucumis sativus GN=Csa_6G376250 PE=4 SV=1[more]
A0A0A0KLD7_CUCSA2.2e-4675.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173500 PE=4 SV=1[more]
F6H0H4_VITVI5.4e-4558.86Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01630 PE=4 SV=... [more]
A0A061FHR5_THECC1.0e-4360.98Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=... [more]
W9RRJ8_9ROSA1.0e-4359.76Putative calcium-binding protein CML44 OS=Morus notabilis GN=L484_003448 PE=4 SV... [more]
BLAST of ClCG08G006060 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21550.15.2e-3146.91 Calcium-binding EF-hand family protein[more]
AT4G20780.15.2e-2340.38 calmodulin like 42[more]
AT5G44460.11.2e-2240.00 calmodulin like 43[more]
AT1G05990.13.5e-1938.46 EF hand calcium-binding protein family[more]
AT4G03290.11.9e-1736.25 EF hand calcium-binding protein family[more]
BLAST of ClCG08G006060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081990|ref|XP_008441608.1|1.3e-7690.12PREDICTED: probable calcium-binding protein CML44 [Cucumis melo][more]
gi|449463432|ref|XP_004149438.1|1.4e-7386.06PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus][more]
gi|778700636|ref|XP_004143706.2|3.2e-4675.00PREDICTED: probable calcium-binding protein CML44 [Cucumis sativus][more]
gi|225459681|ref|XP_002285886.1|7.8e-4558.86PREDICTED: probable calcium-binding protein CML44 [Vitis vinifera][more]
gi|703133631|ref|XP_010105440.1|1.5e-4359.76putative calcium-binding protein CML44 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G006060.1ClCG08G006060.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 8..33
score: 3.
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 94..157
score: 1.
IPR002048EF-hand domainSMARTSM00054efh_1coord: 92..120
score: 0.011coord: 132..160
score: 0.0082coord: 8..36
score: 1.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 128..161
score: 13.537coord: 88..123
score: 13.007coord: 4..39
score: 12
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 107..157
score: 8.9E-17coord: 7..59
score: 1.5E-8coord: 60..106
score: 1.
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 7..158
score: 2.44
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 17..29
score: -coord: 101..113
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..158
score: 4.8
NoneNo IPR availablePANTHERPTHR10891:SF530SUBFAMILY NOT NAMEDcoord: 1..158
score: 4.8