CmoCh04G010690 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGTGGGTGTAGAGAGAGGAAGAAACGGCGGTAACGGAACCAAGCGGCAGGCGGGAGGAGCAGTCGTCGCCGCCGCAATTTTCTTCATTTGCCTTATTTTCGTGCTCTCTCGGATGACACTTTCCTCCGCCGCCGTTAGAGGTGTTAACGTCCCCACGTTAACTAAATCCGCCACCCTTCACCGGAAGACCCACGTTTTCGAAACGGAGGAGCTCTTTAAACCACCGGCCGGTTTCAAAATCCACGCTGACGTTGCGGACATTGTATACGAGGATGATAAACGGGTGGTCCATACCGGCCCAAATCCGCTTCACAATTAG ATGAGAGTGGGTGTAGAGAGAGGAAGAAACGGCGGTAACGGAACCAAGCGGCAGGCGGGAGGAGCAGTCGTCGCCGCCGCAATTTTCTTCATTTGCCTTATTTTCGTGCTCTCTCGGATGACACTTTCCTCCGCCGCCGTTAGAGGTGTTAACGTCCCCACGTTAACTAAATCCGCCACCCTTCACCGGAAGACCCACGTTTTCGAAACGGAGGAGCTCTTTAAACCACCGGCCGGTTTCAAAATCCACGCTGACGTTGCGGACATTGTATACGAGGATGATAAACGGGTGGTCCATACCGGCCCAAATCCGCTTCACAATTAG ATGAGAGTGGGTGTAGAGAGAGGAAGAAACGGCGGTAACGGAACCAAGCGGCAGGCGGGAGGAGCAGTCGTCGCCGCCGCAATTTTCTTCATTTGCCTTATTTTCGTGCTCTCTCGGATGACACTTTCCTCCGCCGCCGTTAGAGGTGTTAACGTCCCCACGTTAACTAAATCCGCCACCCTTCACCGGAAGACCCACGTTTTCGAAACGGAGGAGCTCTTTAAACCACCGGCCGGTTTCAAAATCCACGCTGACGTTGCGGACATTGTATACGAGGATGATAAACGGGTGGTCCATACCGGCCCAAATCCGCTTCACAATTAG
BLAST of CmoCh04G010690 vs. Swiss-Prot
Match: CLE16_ARATH (CLAVATA3/ESR (CLE)-related protein 16 OS=Arabidopsis thaliana GN=CLE16 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
BLAST of CmoCh04G010690 vs. TrEMBL
Match: A0A0A0KIX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G060150 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 6.4e-34 Identity = 80/112 (71.43%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of CmoCh04G010690 vs. TrEMBL
Match: V4UGP5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017256mg PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-06 Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 1
BLAST of CmoCh04G010690 vs. TrEMBL
Match: B9HW54_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12130g PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.6e-06 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 1
BLAST of CmoCh04G010690 vs. TAIR10
Match: AT2G01505.1 (AT2G01505.1 CLAVATA3/ESR-RELATED 16) HSP 1 Score: 53.9 bits (128), Expect = 7.0e-08 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
BLAST of CmoCh04G010690 vs. NCBI nr
Match: gi|778708173|ref|XP_011656136.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 16-like [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 9.1e-34 Identity = 80/112 (71.43%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of CmoCh04G010690 vs. NCBI nr
Match: gi|567911845|ref|XP_006448236.1| (hypothetical protein CICLE_v10017256mg [Citrus clementina]) HSP 1 Score: 58.9 bits (141), Expect = 6.2e-06 Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 1
BLAST of CmoCh04G010690 vs. NCBI nr
Match: gi|224111494|ref|XP_002315878.1| (hypothetical protein POPTR_0010s12130g [Populus trichocarpa]) HSP 1 Score: 58.5 bits (140), Expect = 8.1e-06 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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