Bhi07G000236 (gene) Wax gourd

NameBhi07G000236
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCLAVATA3/ESR (CLE)-related protein 16
Locationchr7 : 12850254 .. 12851578 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGTTAAGAAGTGCTTTTGTTCATATACTTACAGTAAGCATGTTTTTTTTAAAAAAAAAACTTTTTTCAAATTTAAGGGTGTCGTTTTTATACTTTCAAGAGTTTATGAGTATTTTCTTAAACAAAACACTAATGATTTTCATTCAGAACTAGCAATATAGGTACGTTTTAAATTTTTTTTAAAAAAAAAATTAAGGATATTTTGAAAACTTGGAGGTTATTTTTATAATTTAGCCCAGTTCAATATACTGATTAGAACTACCAGATAGATTAAGTGTAGAAGATTTTGGAAGGGTTGAAATGGAATTGGAACTTGAGCCTTTTCTTAAACTCTCTCTAGTGTAAGAGAGGGAAAGAGAAAAACAATAAAAGAAATACATAAGAAGGTTCTCAAGAATCAAAGAGAGAGTCAGAAATCATGTGGGTTAGACCCATGATATAAGGAAAAACATACACCCATCTTTTATCTCTCTTCCTCTCTCTCTCTCTCTCCCATTTTCATATTCTTCACCATTTTTGCTTCCATTTCTAGAACTCTTCAAAATCACAGAGAACCCAGAAAAGAAAAAGAAAAAAGAAATCTTTTTTTTTTTGAGGGTGTGGTGGGTGTGTGGCAATGAGAGTGGGTGTAGAAAGAGGAAGAAACGGCGGTAACGGAAGGAAACGGCAAGCCGGAGCAGTGGCGGCAATTTTCTTCATATGGCTTATTTTGGTGGTGTCTCGAATGAGATTATCGTCCGCCACCGTTAAAGGAGTTAACGACCGGACGTTAACCAAATCCACCGCTCTTCACAGGAAGACTCACGTTTTCCAAACGGAGGAGGTGTTTAAACCGCCAGCCGGTTTCAAAATCCATGGCGGAGGACGAAACGACGACGTTGCGGATATTGTATACGAAGATGATAAACGGGTGATCCACACCGGCCCAAATCCGCTTCATAATTAGGCCCAATAAGGCCCAACAACAACAACAACAACCACCCCATATCTGTTTATTCTGCTACAGAACAATTTCTTCTGTAAGAGAAGCTTTCAATTTTTTTTTTTTAATTATTTAGAAATTTGAAGAGAAATAAGATCATTGGGCTAGCTTTTTTTTTTTTTAATTTAATGAAAAAGGGACAAAAAAAGGCTAGTGATAATGCTCTTGTTTTCTTCTTCTTTAGTATCTCTTGCATGTGTATCAATTTATTGCTTTGTTATTTTGGTACATCTCGAACAACATCTATCTTTATGCATCCTATCAAATTGTCCAATCATAATTTCATGTGCGGCAAATTATGTGTATTTATTTATTTTTTAATATTTTAATTACCTTTTGGTA

mRNA sequence

CTAGTTAAGAAGTGCTTTTGTTCATATACTTACAGTAAGCATGTTTTTTTTAAAAAAAAAACTTTTTTCAAATTTAAGGGTGTCGTTTTTATACTTTCAAGAGTTTATGAGTATTTTCTTAAACAAAACACTAATGATTTTCATTCAGAACTAGCAATATAGGTACGTTTTAAATTTTTTTTAAAAAAAAAATTAAGGATATTTTGAAAACTTGGAGGTTATTTTTATAATTTAGCCCAGTTCAATATACTGATTAGAACTACCAGATAGATTAAGTGTAGAAGATTTTGGAAGGGTTGAAATGGAATTGGAACTTGAGCCTTTTCTTAAACTCTCTCTAGTGTAAGAGAGGGAAAGAGAAAAACAATAAAAGAAATACATAAGAAGGTTCTCAAGAATCAAAGAGAGAGTCAGAAATCATGTGGGTTAGACCCATGATATAAGGAAAAACATACACCCATCTTTTATCTCTCTTCCTCTCTCTCTCTCTCTCCCATTTTCATATTCTTCACCATTTTTGCTTCCATTTCTAGAACTCTTCAAAATCACAGAGAACCCAGAAAAGAAAAAGAAAAAAGAAATCTTTTTTTTTTTGAGGGTGTGGTGGGTGTGTGGCAATGAGAGTGGGTGTAGAAAGAGGAAGAAACGGCGGTAACGGAAGGAAACGGCAAGCCGGAGCAGTGGCGGCAATTTTCTTCATATGGCTTATTTTGGTGGTGTCTCGAATGAGATTATCGTCCGCCACCGTTAAAGGAGTTAACGACCGGACGTTAACCAAATCCACCGCTCTTCACAGGAAGACTCACGTTTTCCAAACGGAGGAGGTGTTTAAACCGCCAGCCGGTTTCAAAATCCATGGCGGAGGACGAAACGACGACGTTGCGGATATTGTATACGAAGATGATAAACGGGTGATCCACACCGGCCCAAATCCGCTTCATAATTAGGCCCAATAAGGCCCAACAACAACAACAACAACCACCCCATATCTGTTTATTCTGCTACAGAACAATTTCTTCTGTAAGAGAAGCTTTCAATTTTTTTTTTTTAATTATTTAGAAATTTGAAGAGAAATAAGATCATTGGGCTAGCTTTTTTTTTTTTTAATTTAATGAAAAAGGGACAAAAAAAGGCTAGTGATAATGCTCTTGTTTTCTTCTTCTTTAGTATCTCTTGCATGTGTATCAATTTATTGCTTTGTTATTTTGGTACATCTCGAACAACATCTATCTTTATGCATCCTATCAAATTGTCCAATCATAATTTCATGTGCGGCAAATTATGTGTATTTATTTATTTTTTAATATTTTAATTACCTTTTGGTA

Coding sequence (CDS)

ATGAGAGTGGGTGTAGAAAGAGGAAGAAACGGCGGTAACGGAAGGAAACGGCAAGCCGGAGCAGTGGCGGCAATTTTCTTCATATGGCTTATTTTGGTGGTGTCTCGAATGAGATTATCGTCCGCCACCGTTAAAGGAGTTAACGACCGGACGTTAACCAAATCCACCGCTCTTCACAGGAAGACTCACGTTTTCCAAACGGAGGAGGTGTTTAAACCGCCAGCCGGTTTCAAAATCCATGGCGGAGGACGAAACGACGACGTTGCGGATATTGTATACGAAGATGATAAACGGGTGATCCACACCGGCCCAAATCCGCTTCATAATTAG

Protein sequence

MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKTHVFQTEEVFKPPAGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN
BLAST of Bhi07G000236 vs. Swiss-Prot
Match: sp|Q8S8M2|CLE16_ARATH (CLAVATA3/ESR (CLE)-related protein 16 OS=Arabidopsis thaliana OX=3702 GN=CLE16 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-05
Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = 0

Query: 23  AAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKTHVFQTEEVFK-PPAGFKIHG 82
           AA+FF   I V ++  +SS+ +   +        +L RK   F     F+ P A     G
Sbjct: 22  AAVFFCG-IFVFAQFGISSSALFAPD-----HYPSLPRKAGHFHEMASFQAPKATVSFTG 81

Query: 83  GGRNDDVADIVYEDDKRVIHTGPNPLHN 110
             R ++  D VY+DDKR++HTGPNPLHN
Sbjct: 82  QRREEENRDEVYKDDKRLVHTGPNPLHN 103

BLAST of Bhi07G000236 vs. TAIR10
Match: AT2G01505.1 (CLAVATA3/ESR-RELATED 16)

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = 0

Query: 23  AAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKTHVFQTEEVFK-PPAGFKIHG 82
           AA+FF   I V ++  +SS+ +   +        +L RK   F     F+ P A     G
Sbjct: 22  AAVFFCG-IFVFAQFGISSSALFAPD-----HYPSLPRKAGHFHEMASFQAPKATVSFTG 81

Query: 83  GGRNDDVADIVYEDDKRVIHTGPNPLHN 110
             R ++  D VY+DDKR++HTGPNPLHN
Sbjct: 82  QRREEENRDEVYKDDKRLVHTGPNPLHN 103

BLAST of Bhi07G000236 vs. TAIR10
Match: AT1G70895.1 (CLAVATA3/ESR-RELATED 17)

HSP 1 Score: 42.7 bits (99), Expect = 1.6e-04
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 0

Query: 90  DIVYEDDKRVIHTGPNPLHN 110
           D +Y DDKRV+HTGPNPLHN
Sbjct: 80  DDIYGDDKRVVHTGPNPLHN 99

BLAST of Bhi07G000236 vs. TrEMBL
Match: tr|A0A0A0KIX6|A0A0A0KIX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G060150 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.2e-34
Identity = 76/109 (69.72%), Postives = 79/109 (72.48%), Query Frame = 0

Query: 1   MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHR 60
           MRVGVERGRN                      VVSRMRLSSA  K VN R LTKST LHR
Sbjct: 1   MRVGVERGRNXXXXXXXXXXXXXXXXXXXXXXVVSRMRLSSAASKEVNGRMLTKSTVLHR 60

Query: 61  KTHVFQTEEVFKPPAGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
           KTH+F+TEEVFKPPAGFK+HGGG NDDV DIVYEDDKRVIHTGPNPLHN
Sbjct: 61  KTHIFETEEVFKPPAGFKVHGGGENDDVTDIVYEDDKRVIHTGPNPLHN 109

BLAST of Bhi07G000236 vs. TrEMBL
Match: tr|A0A067FB56|A0A067FB56_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g048706mg PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.1e-08
Identity = 42/97 (43.30%), Postives = 52/97 (53.61%), Query Frame = 0

Query: 15  RKRQAGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKTHVFQTEEVF--K 74
           R+R AGA       W+IL+ S + L  A     +D T T S+   RKT  F TE  F   
Sbjct: 27  RRRCAGAKXXXXXXWVILIFSLLGLLCAL---HDDETGTYSSFSARKTRSFNTESTFHAP 86

Query: 75  PPAGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
           PP+   +      D+    VYEDDKR+IHTGPNPLHN
Sbjct: 87  PPSISGLLVDTEADNPGSSVYEDDKRIIHTGPNPLHN 120

BLAST of Bhi07G000236 vs. TrEMBL
Match: tr|A0A2C9U5W2|A0A2C9U5W2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G078600 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0

Query: 5   VERGRNGGNGRKRQ--AGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKT 64
           +++G     GR+R    G  A +F +W++L+++++ L  A    V++ T     +L RK 
Sbjct: 3   LDKGSIECTGRRRNVAGGRAAIVFLLWVLLILAQLGLFYA----VHEETGKLVKSLPRKV 62

Query: 65  HVFQTEEVFKPPAGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
            + +T+    PP+  K+      +   D VY DDKR+IHTGPNPLHN
Sbjct: 63  RLLETQSFDAPPS--KVQSSMDIEGDPDTVYGDDKRIIHTGPNPLHN 103

BLAST of Bhi07G000236 vs. TrEMBL
Match: tr|B9HW54|B9HW54_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G111200v3 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-07
Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 0

Query: 2   RVGVERGRNGGNGRKRQAGA--VAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALH 61
           +VGVE  R      +R AGA   A IF  W++L+++++ +       V++ T     +L 
Sbjct: 6   KVGVEAAR-----ARRYAGAARAAIIFLFWILLILAQLGVFLV----VHEETDKPVKSLP 65

Query: 62  RKTHVFQTEEVFKPP---AGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
           RK  VF+T  V   P       I GG       D VYEDDKR IHTGPNPLHN
Sbjct: 66  RKARVFETGSVHASPNQDQPVNIDGGD-----PDAVYEDDKRTIHTGPNPLHN 104

BLAST of Bhi07G000236 vs. TrEMBL
Match: tr|A0A1Q3B5H3|A0A1Q3B5H3_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_06645 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-07
Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 0

Query: 14  GRKRQAGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKTHVFQTEEVFKP 73
           GR++ AGA+A +F +W++LV++++ L  A  + +  R LT      +   + +T+ +  P
Sbjct: 11  GRRQAAGAIAVLFLMWVVLVLAQLGLFFAFHEDIG-RLLTSHQLPRKARFLLETQSLHAP 70

Query: 74  PAGFKI---HGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
           P   ++    G   N      +Y D+KR+IHTGPNPLHN
Sbjct: 71  PKPAQLVDYEGHPSN------LYADEKRIIHTGPNPLHN 102

BLAST of Bhi07G000236 vs. NCBI nr
Match: XP_011656136.1 (PREDICTED: CLAVATA3/ESR (CLE)-related protein 16-like [Cucumis sativus] >KGN49680.1 hypothetical protein Csa_5G060150 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33
Identity = 76/109 (69.72%), Postives = 79/109 (72.48%), Query Frame = 0

Query: 1   MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHR 60
           MRVGVERGRN                      VVSRMRLSSA  K VN R LTKST LHR
Sbjct: 1   MRVGVERGRNXXXXXXXXXXXXXXXXXXXXXXVVSRMRLSSAASKEVNGRMLTKSTVLHR 60

Query: 61  KTHVFQTEEVFKPPAGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
           KTH+F+TEEVFKPPAGFK+HGGG NDDV DIVYEDDKRVIHTGPNPLHN
Sbjct: 61  KTHIFETEEVFKPPAGFKVHGGGENDDVTDIVYEDDKRVIHTGPNPLHN 109

BLAST of Bhi07G000236 vs. NCBI nr
Match: KDO64624.1 (hypothetical protein CISIN_1g048706mg, partial [Citrus sinensis])

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-08
Identity = 42/97 (43.30%), Postives = 52/97 (53.61%), Query Frame = 0

Query: 15  RKRQAGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKTHVFQTEEVF--K 74
           R+R AGA       W+IL+ S + L  A     +D T T S+   RKT  F TE  F   
Sbjct: 27  RRRCAGAKXXXXXXWVILIFSLLGLLCAL---HDDETGTYSSFSARKTRSFNTESTFHAP 86

Query: 75  PPAGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
           PP+   +      D+    VYEDDKR+IHTGPNPLHN
Sbjct: 87  PPSISGLLVDTEADNPGSSVYEDDKRIIHTGPNPLHN 120

BLAST of Bhi07G000236 vs. NCBI nr
Match: OAY25247.1 (hypothetical protein MANES_17G078600 [Manihot esculenta])

HSP 1 Score: 65.1 bits (157), Expect = 1.7e-07
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0

Query: 5   VERGRNGGNGRKRQ--AGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKT 64
           +++G     GR+R    G  A +F +W++L+++++ L  A    V++ T     +L RK 
Sbjct: 3   LDKGSIECTGRRRNVAGGRAAIVFLLWVLLILAQLGLFYA----VHEETGKLVKSLPRKV 62

Query: 65  HVFQTEEVFKPPAGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
            + +T+    PP+  K+      +   D VY DDKR+IHTGPNPLHN
Sbjct: 63  RLLETQSFDAPPS--KVQSSMDIEGDPDTVYGDDKRIIHTGPNPLHN 103

BLAST of Bhi07G000236 vs. NCBI nr
Match: PNT15890.1 (hypothetical protein POPTR_010G111200v3 [Populus trichocarpa])

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07
Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 0

Query: 2   RVGVERGRNGGNGRKRQAGA--VAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALH 61
           +VGVE  R      +R AGA   A IF  W++L+++++ +       V++ T     +L 
Sbjct: 6   KVGVEAAR-----ARRYAGAARAAIIFLFWILLILAQLGVFLV----VHEETDKPVKSLP 65

Query: 62  RKTHVFQTEEVFKPP---AGFKIHGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
           RK  VF+T  V   P       I GG       D VYEDDKR IHTGPNPLHN
Sbjct: 66  RKARVFETGSVHASPNQDQPVNIDGGD-----PDAVYEDDKRTIHTGPNPLHN 104

BLAST of Bhi07G000236 vs. NCBI nr
Match: GAV63124.1 (hypothetical protein CFOL_v3_06645 [Cephalotus follicularis])

HSP 1 Score: 62.8 bits (151), Expect = 8.5e-07
Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 0

Query: 14  GRKRQAGAVAAIFFIWLILVVSRMRLSSATVKGVNDRTLTKSTALHRKTHVFQTEEVFKP 73
           GR++ AGA+A +F +W++LV++++ L  A  + +  R LT      +   + +T+ +  P
Sbjct: 11  GRRQAAGAIAVLFLMWVVLVLAQLGLFFAFHEDIG-RLLTSHQLPRKARFLLETQSLHAP 70

Query: 74  PAGFKI---HGGGRNDDVADIVYEDDKRVIHTGPNPLHN 110
           P   ++    G   N      +Y D+KR+IHTGPNPLHN
Sbjct: 71  PKPAQLVDYEGHPSN------LYADEKRIIHTGPNPLHN 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q8S8M2|CLE16_ARATH2.4e-0537.50CLAVATA3/ESR (CLE)-related protein 16 OS=Arabidopsis thaliana OX=3702 GN=CLE16 P... [more]
Match NameE-valueIdentityDescription
AT2G01505.11.3e-0637.50CLAVATA3/ESR-RELATED 16[more]
AT1G70895.11.6e-0480.00CLAVATA3/ESR-RELATED 17[more]
Match NameE-valueIdentityDescription
tr|A0A0A0KIX6|A0A0A0KIX6_CUCSA9.2e-3469.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G060150 PE=4 SV=1[more]
tr|A0A067FB56|A0A067FB56_CITSI5.1e-0843.30Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g048706m... [more]
tr|A0A2C9U5W2|A0A2C9U5W2_MANES1.1e-0734.58Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G078600 PE=4 SV=... [more]
tr|B9HW54|B9HW54_POPTR1.5e-0739.82Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G111200v3 PE=... [more]
tr|A0A1Q3B5H3|A0A1Q3B5H3_CEPFO5.6e-0734.34Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_06645 PE=4... [more]
Match NameE-valueIdentityDescription
XP_011656136.11.4e-3369.72PREDICTED: CLAVATA3/ESR (CLE)-related protein 16-like [Cucumis sativus] >KGN4968... [more]
KDO64624.17.7e-0843.30hypothetical protein CISIN_1g048706mg, partial [Citrus sinensis][more]
OAY25247.11.7e-0734.58hypothetical protein MANES_17G078600 [Manihot esculenta][more]
PNT15890.12.2e-0739.82hypothetical protein POPTR_010G111200v3 [Populus trichocarpa][more]
GAV63124.18.5e-0734.34hypothetical protein CFOL_v3_06645 [Cephalotus follicularis][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0048731system development
Vocabulary: INTERPRO
TermDefinition
IPR033249CLE_plant
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048731 system development
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000236Bhi07M000236mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033249CLAVATA3/ESR (CLE)-related protein, plantPANTHERPTHR34545FAMILY NOT NAMEDcoord: 15..109
NoneNo IPR availablePANTHERPTHR34545:SF2CLAVATA3/ESR CLE -RELATED PROTEIN 16-RELATEDcoord: 15..109