CmaCh04G009910 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGTGAGTGTAGAGAGAGGAAGAAACGGCGGTAATGGAACCAAACGGCACGCGGGAGGAGCAGTCGTCGCCGCCGCAATTTTCTTCATTTGTCTTATTTTCGTGCTCTCTCGGATGACACTCTCCTCCGCCGCCGTTAGAGGTGTTAACGTCCCCACGTTAACAAAATCCGCCACTCTTCACCGGAAGACCCACGTTTTCGAAACGGAGGAGCTCTTTAAACCACCGGCCGGTTTCAAAATCCACGCTGACGTTGCGGACATTGTATACGAGGATGATAAACGGGTGGTCCATACCGGCCCAAATCCGCTTCACAATTAG ATGAGAGTGAGTGTAGAGAGAGGAAGAAACGGCGGTAATGGAACCAAACGGCACGCGGGAGGAGCAGTCGTCGCCGCCGCAATTTTCTTCATTTGTCTTATTTTCGTGCTCTCTCGGATGACACTCTCCTCCGCCGCCGTTAGAGGTGTTAACGTCCCCACGTTAACAAAATCCGCCACTCTTCACCGGAAGACCCACGTTTTCGAAACGGAGGAGCTCTTTAAACCACCGGCCGGTTTCAAAATCCACGCTGACGTTGCGGACATTGTATACGAGGATGATAAACGGGTGGTCCATACCGGCCCAAATCCGCTTCACAATTAG ATGAGAGTGAGTGTAGAGAGAGGAAGAAACGGCGGTAATGGAACCAAACGGCACGCGGGAGGAGCAGTCGTCGCCGCCGCAATTTTCTTCATTTGTCTTATTTTCGTGCTCTCTCGGATGACACTCTCCTCCGCCGCCGTTAGAGGTGTTAACGTCCCCACGTTAACAAAATCCGCCACTCTTCACCGGAAGACCCACGTTTTCGAAACGGAGGAGCTCTTTAAACCACCGGCCGGTTTCAAAATCCACGCTGACGTTGCGGACATTGTATACGAGGATGATAAACGGGTGGTCCATACCGGCCCAAATCCGCTTCACAATTAG MRVSVERGRNGGNGTKRHAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEELFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLHN
BLAST of CmaCh04G009910 vs. Swiss-Prot
Match: CLE16_ARATH (CLAVATA3/ESR (CLE)-related protein 16 OS=Arabidopsis thaliana GN=CLE16 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
BLAST of CmaCh04G009910 vs. TrEMBL
Match: A0A0A0KIX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G060150 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 3.2e-33 Identity = 79/112 (70.54%), Postives = 85/112 (75.89%), Query Frame = 1
BLAST of CmaCh04G009910 vs. TrEMBL
Match: V4UGP5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017256mg PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-06 Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 1
BLAST of CmaCh04G009910 vs. TrEMBL
Match: A0A067FB56_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048706mg PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.6e-06 Identity = 41/113 (36.28%), Postives = 54/113 (47.79%), Query Frame = 1
BLAST of CmaCh04G009910 vs. TAIR10
Match: AT2G01505.1 (AT2G01505.1 CLAVATA3/ESR-RELATED 16) HSP 1 Score: 53.9 bits (128), Expect = 7.0e-08 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
BLAST of CmaCh04G009910 vs. NCBI nr
Match: gi|778708173|ref|XP_011656136.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 16-like [Cucumis sativus]) HSP 1 Score: 149.1 bits (375), Expect = 4.5e-33 Identity = 79/112 (70.54%), Postives = 85/112 (75.89%), Query Frame = 1
BLAST of CmaCh04G009910 vs. NCBI nr
Match: gi|567911845|ref|XP_006448236.1| (hypothetical protein CICLE_v10017256mg [Citrus clementina]) HSP 1 Score: 60.8 bits (146), Expect = 1.6e-06 Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 1
BLAST of CmaCh04G009910 vs. NCBI nr
Match: gi|641845738|gb|KDO64624.1| (hypothetical protein CISIN_1g048706mg, partial [Citrus sinensis]) HSP 1 Score: 58.5 bits (140), Expect = 8.1e-06 Identity = 41/113 (36.28%), Postives = 54/113 (47.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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