CmoCh04G009100 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G009100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cytochrome c oxidase subunit 6a, mitochondrial-like protein
Location	Cmo_Chr04 : 4577915 .. 4580271 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCACGTGCCGAGATCACACGTTTGGGTAGTTTTGGTGAAAGGGCTCTCGATCGAGATTGCAAGGGTACGGTCATTTCAATTATAACTCGGGCATCGGCGATTTGTTAGAGAAAGAGAGAGTCAAAAGAGAATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCGTAAGTCTCTCTCTCGGTATTTCTGGATATGTTTTTTTCTTTATGGACGGAAATTTTCTTGTTACTTTTGGCAACTTCGTTTAGCCCATTCATTTTCCTGGCCTATTTTTATGATGAAATTGGGGAAACTAGGATGATGTTAATTATTGAATCGTGTTCAGAAATTTGGACCAAGATAATTTGGTCGGGCGCTCTTTGTTCCTTTTAGATTGCAAGTCTTGCAAGGGGAGGTTTTTTTTTTCCTTCAATTTTAAATTCAGATTTAAATGTTAAATCATAGTATGGGATGGGAGTATATACATGACATATTTGACAATTAACTTTAGATAGGGTTTCCAGTCGCTAAAGGAGTAGTTTTGATTTAAAGTTCGTGGTAAGGAAAAAGACAAGAGGGGCAAAAGCTTCCTGTTCCATTACTGAGTGGCAACAATATCATTCTTGATTTCTGTAATTACATAAAAATGCTTTCTAAAGTCTTAGATGTGGCTTGTGGTAGGTTCAGTTTCCTTTTGATTTCACATAAATACGACATGAAGGAAAGGGAATATGCAGTAAGTTTATTAGACGGTTTAGGGCTTTAGTTAAAAAAAATTCTTCTCTGGGAAGTTTATACACCTCTAATCCTACGCCTGCCTCTTATTTCTTTATTTCCCCCATTTTTTCTTTCTTTCTTTTCCCCCACACAATTCTGGGTTGCGAGTAAGGGGACGAATATTATTCTGTGTTTTGAGGTGATTTCAGTAAATTGTTGGAGCTAAACCAATCTGTGCTGTGAATTTATTTTATATTGTTCCACCATAACATATACTTGATGGTGGCCTTTACTTAGTTGGGTACAAATTATGTATTGTTATTTTTAAATACTATTTCAGACTTATAGTGTACAAACAAGTGGGAGAGAAAAATTTTATGCAGGAGCGCAATGATGCTTGTACTGCCTATGCTTTATCTCTCATACAACCCTTCTTTCTTTATTTCAGTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGTGAGCTACAACTTTAGTCAATTTATAATTTTCCTACCACTTCTCAGTATCCTAGTTGCATTATTCATTGTACTCTCATGTGTGGCCAATTCATTTTTGTTTGGGTTTTCATTGTATGCAGGCATACCCATATTTGCACATACGCAATAAGGAGTTCCCATGGGGTAAGTTTCCATTGCATTACAAGTTCTATGACATCTTTTTTATCTCTTGGCAGTCGCAATTTGGGTTTTGATGAGGTAACTAGAACTGGATGCTGCAGTGATATCATGTAGTATATATTTACTGGACGCCAAGCAAACTTACAGCTATCTTGTAACTAATATATTTACTGCTAATTTGGCAGCTAGCAACTAATATGCTCATAAATACCTCGTTCAGCTTGCTAACAGTTTTTAGTCCTATTATAACCTTGTCCTTTCATTAACCCAACTCTCACTACTTTTAAATGCTCCATGGTCAAAATTTCTAATGGTAGTTCGACAGCTTCCTCTTTCTGTTGGTCGATCATCTCAAGGGGTCTATGGATACTTATGGGATAAAAGTGTTTGTAAGCTGTTTCCAAGAAGTAAACATTTTAGAATAAAAGTTATATGTTTTTGTAACTGTTTTCGACAGTTGCTTCACTCAGTATATTTTAGAAGAACTGCAGTTGAAATGTTAAAATCTTTACAAACGAAAAAGTCATAGCATCATCGTAGGAAAAAGAGCTGGAGATGATGTACCACGGCATTTGTCAGAACTGGTTGAATTTGATCAATGATCTTATATTCGTTCATCTTTACTCTCTGCTCGTTGCTCATTTGCTCCTTTTCTGTTTATTATTTATTGTGAAAATAATATTGTTTTATTTTCAATCCCTTTTGCATCAGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGAGGACTATTTTGGTTCAAGGGGACATCGAGCATGGTAATTCTACTTCTCATTTGGTTCATATCAGAAAGACTTCGTTGACCCGTTTGGTTGGATTTTTCTTTTTAATGATGCGTGGGCCAT

mRNA sequence

CGCACGTGCCGAGATCACACGTTTGGGTAGTTTTGGTGAAAGGGCTCTCGATCGAGATTGCAAGGGTACGGTCATTTCAATTATAACTCGGGCATCGGCGATTTGTTAGAGAAAGAGAGAGTCAAAAGAGAATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATACCCATATTTGCACATACGCAATAAGGAGTTCCCATGGGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGAGGACTATTTTGGTTCAAGGGGACATCGAGCATGGTAATTCTACTTCTCATTTGGTTCATATCAGAAAGACTTCGTTGACCCGTTTGGTTGGATTTTTCTTTTTAATGATGCGTGGGCCAT

Coding sequence (CDS)

ATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCTGCCTTCCGCGGTGCCTCTCGGAACTCCGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGATGCTCTTGAAACGGCAAAATGGGAGAAGATTACTTATGCAGGCATTGCAGCCTGCACCACTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACCATGAAGAGCCCCCTGCATACCCATATTTGCACATACGCAATAAGGAGTTCCCATGGGGTCCCGATGGTCTCTTTGAGGTGAAACATCACTGA

Homology

[Close]

BLAST of CmoCh04G009100 vs. Swiss-Prot
Match: COX6A_ARATH (Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana GN=COX6A PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-33
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MA A +RS L RA  R A + S  PKR F+SSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHN 99

[Close]

BLAST of CmoCh04G009100 vs. TrEMBL
Match: A0A0A0L3I0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G115610 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 5.6e-45
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 1


Query: 3  MATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFYNL 62
          MA+IRSNLLRAA RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFYNL
Sbjct: 1  MASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL 60

Query: 63 SKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          SKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Sbjct: 61 SKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH 96

[Close]

BLAST of CmoCh04G009100 vs. TrEMBL
Match: A0A0D2NVS1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G034000 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.4e-40
Identity = 81/99 (81.82%), Postives = 86/99 (86.87%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAH-DDALETAKWEKITYAGIAACTTLAF 60
          MAMA++RS LLRAA RG SR +A PKRGFASS+H DDA ETAKWEKITY G+A CT LA 
Sbjct: 1  MAMASVRSGLLRAALRGGSRPTAPPKRGFASSSHHDDAYETAKWEKITYLGVATCTVLAI 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFE K H
Sbjct: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFETKEH 99

[Close]

BLAST of CmoCh04G009100 vs. TrEMBL
Match: A0A0B0PN89_GOSAR (Cytochrome c oxidase subunit 6a, mitochondrial-like protein OS=Gossypium arboreum GN=F383_13220 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-39
Identity = 81/99 (81.82%), Postives = 86/99 (86.87%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAH-DDALETAKWEKITYAGIAACTTLAF 60
          MAMA++RS LLRAA RG SR +A PKRGFASS+H DDA ETAKWEKITY G+A CT LA 
Sbjct: 1  MAMASVRSGLLRAALRGGSRPTAPPKRGFASSSHHDDAYETAKWEKITYLGVATCTVLAI 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFE K H
Sbjct: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFERKEH 99

[Close]

BLAST of CmoCh04G009100 vs. TrEMBL
Match: A0A059AMS2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00649 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.6e-39
Identity = 79/98 (80.61%), Postives = 85/98 (86.73%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMA +RS LLR++ RG +R S+ PKR FASSAHDDA ETAKWEKITYAGI  CT LA Y
Sbjct: 1  MAMAMVRSALLRSSLRGGARPSSVPKRNFASSAHDDAHETAKWEKITYAGIVTCTILAIY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPH+EEP AYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHYEEPAAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of CmoCh04G009100 vs. TrEMBL
Match: A0A0B0PEW8_GOSAR (Cytochrome c oxidase subunit 6a, mitochondrial-like protein OS=Gossypium arboreum GN=F383_28800 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.9e-39
Identity = 80/99 (80.81%), Postives = 84/99 (84.85%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MAMA++RS LLR A RG SR  A PKRGF+SS  HDDA ETAKWEKITY GI  CT LAF
Sbjct: 1  MAMASVRSGLLRTALRGGSRPPAPPKRGFSSSPNHDDAYETAKWEKITYLGILTCTGLAF 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          YNLSKGHPH+EEPP YPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 YNLSKGHPHYEEPPPYPYLHIRNKEFPWGPDGLFEVKHH 99

[Close]

BLAST of CmoCh04G009100 vs. TAIR10
Match: AT4G37830.1 (AT4G37830.1 cytochrome c oxidase-related)

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-34
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDALETAKWEKITYAGIAACTTLAF 60
          MA A +RS L RA  R A + S  PKR F+SSA HDDA E AKWEKITY GIA+CT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          Y LSKGH H E+PPAYP++HIRNKEFPWGPDGLFEVKH+
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVKHN 99

[Close]

BLAST of CmoCh04G009100 vs. NCBI nr
Match: gi|778676558|ref|XP_011650608.1| (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 9.5e-46
Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMA+IRSNLLRAA RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFY
Sbjct: 1  MAMASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of CmoCh04G009100 vs. NCBI nr
Match: gi|659098495|ref|XP_008450167.1| (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-45
Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
          MAMA+IRSN LRAA RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFY
Sbjct: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of CmoCh04G009100 vs. NCBI nr
Match: gi|700201190|gb|KGN56323.1| (hypothetical protein Csa_3G115610 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 8.1e-45
Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 1


Query: 3  MATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFYNL 62
          MA+IRSNLLRAA RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFYNL
Sbjct: 1  MASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL 60

Query: 63 SKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          SKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVKHH
Sbjct: 61 SKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH 96

[Close]

BLAST of CmoCh04G009100 vs. NCBI nr
Match: gi|823139668|ref|XP_012469699.1| (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial-like [Gossypium raimondii])

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-40
Identity = 81/99 (81.82%), Postives = 86/99 (86.87%), Query Frame = 1


Query: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAH-DDALETAKWEKITYAGIAACTTLAF 60
          MAMA++RS LLRAA RG SR +A PKRGFASS+H DDA ETAKWEKITY G+A CT LA 
Sbjct: 1  MAMASVRSGLLRAALRGGSRPTAPPKRGFASSSHHDDAYETAKWEKITYLGVATCTVLAI 60

Query: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 99
          YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFE K H
Sbjct: 61 YNLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFETKEH 99

[Close]

BLAST of CmoCh04G009100 vs. NCBI nr
Match: gi|778676556|ref|XP_011650607.1| (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-39
Identity = 89/141 (63.12%), Postives = 92/141 (65.25%), Query Frame = 1


Query: 1   MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60
           MAMA+IRSNLLRAA RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFY
Sbjct: 1   MAMASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61  NLSKGHPHHEEPP-------------------------------------------AYPY 99
           NLSKGHPHHEEPP                                           AYPY
Sbjct: 61  NLSKGHPHHEEPPVSYNFSQFILFPQVLSTLVELWNYVLYSHVLTIYFCLGFHCMQAYPY 120

The following BLAST results are available for this feature:

BLAST of CmoCh04G009100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COX6A_ARATH	1.9e-33	70.71	Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana GN=COX6A ...	[more]

BLAST of CmoCh04G009100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3I0_CUCSA	5.6e-45	90.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G115610 PE=3 SV=1	[more]
A0A0D2NVS1_GOSRA	5.4e-40	81.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G034000 PE=3 SV=1	[more]
A0A0B0PN89_GOSAR	1.2e-39	81.82	Cytochrome c oxidase subunit 6a, mitochondrial-like protein OS=Gossypium arboreu...	[more]
A0A059AMS2_EUCGR	4.6e-39	80.61	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00649 PE=3 SV=1	[more]
A0A0B0PEW8_GOSAR	7.9e-39	80.81	Cytochrome c oxidase subunit 6a, mitochondrial-like protein OS=Gossypium arboreu...	[more]

BLAST of CmoCh04G009100 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37830.1	1.0e-34	70.71	cytochrome c oxidase-related	[more]

BLAST of CmoCh04G009100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676558\|ref\|XP_011650608.1\|	9.5e-46	90.82	PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sa...	[more]
gi\|659098495\|ref\|XP_008450167.1\|	1.6e-45	90.82	PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo]	[more]
gi\|700201190\|gb\|KGN56323.1\|	8.1e-45	90.63	hypothetical protein Csa_3G115610 [Cucumis sativus]	[more]
gi\|823139668\|ref\|XP_012469699.1\|	7.8e-40	81.82	PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial-like [Gossypium raimon...	[more]
gi\|778676556\|ref\|XP_011650607.1\|	1.7e-39	63.12	PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial isoform X1 [Cucumis sa...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001349	Cyt_c_oxidase_su6a

Vocabulary: **Molecular Function**
Term	Definition
GO:0004129	cytochrome-c oxidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005743	mitochondrial inner membrane
GO:0005751	mitochondrial respiratory chain complex IV

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0015992	proton transport
biological_process	GO:0016123	xanthophyll biosynthetic process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0070330	aromatase activity
molecular_function	GO:0010291	carotene beta-ring hydroxylase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G009100.1	CmoCh04G009100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001349	Cytochrome c oxidase, subunit VIa	GENE3D	G3DSA:4.10.95.10		coord: 31..93 score: 4.5
IPR001349	Cytochrome c oxidase, subunit VIa	PIR	PIRSF000277	COX_VIa	coord: 1..98 score: 1.8
IPR001349	Cytochrome c oxidase, subunit VIa	PANTHER	PTHR11504	CYTOCHROME C OXIDASE POLYPEPTIDE VIA	coord: 1..98 score: 6.3
IPR001349	Cytochrome c oxidase, subunit VIa	PFAM	PF02046	COX6A	coord: 38..88 score: 1.
IPR001349	Cytochrome c oxidase, subunit VIa	unknown	SSF81411	Mitochondrial cytochrome c oxidase subunit VIa	coord: 30..97 score: 1.57

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G009100	Cucsa.260150	Cucumber (Gy14) v1	cgycmoB0715
CmoCh04G009100	CmaCh16G007350	Cucurbita maxima (Rimu)	cmacmoB337
CmoCh04G009100	CmaCh04G008500	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G009100	Csa3G115610	Cucumber (Chinese Long) v2	cmocuB693
CmoCh04G009100	MELO3C014946	Melon (DHL92) v3.5.1	cmomeB680
CmoCh04G009100	ClCG10G008050	Watermelon (Charleston Gray)	cmowcgB613
CmoCh04G009100	CSPI03G06960	Wild cucumber (PI 183967)	cmocpiB703
CmoCh04G009100	Lsi05G008050	Bottle gourd (USVL1VR-Ls)	cmolsiB685
CmoCh04G009100	Cp4.1LG14g00910	Cucurbita pepo (Zucchini)	cmocpeB667
CmoCh04G009100	Cp4.1LG01g09060	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G009100	MELO3C014946.2	Melon (DHL92) v3.6.1	cmomedB778
CmoCh04G009100	CsaV3_3G007040	Cucumber (Chinese Long) v3	cmocucB0822
CmoCh04G009100	Cla97C10G191520	Watermelon (97103) v2	cmowmbB686
CmoCh04G009100	Bhi11G000745	Wax gourd	cmowgoB0811
CmoCh04G009100	CsGy3G007080	Cucumber (Gy14) v2	cgybcmoB393
CmoCh04G009100	Carg05850	Silver-seed gourd	carcmoB1371
CmoCh04G009100	Carg14249	Silver-seed gourd	carcmoB1259

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G009100	CmoCh16G007950	Cucurbita moschata (Rifu)	cmocmoB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G009100	Cucurbita pepo (Zucchini)	cmocpeB655
CmoCh04G009100	Bottle gourd (USVL1VR-Ls)	cmolsiB628
CmoCh04G009100	Cucumber (Gy14) v2	cgybcmoB824
CmoCh04G009100	Melon (DHL92) v3.6.1	cmomedB801
CmoCh04G009100	Watermelon (97103) v2	cmowmbB689
CmoCh04G009100	Cucurbita moschata (Rifu)	cmocmoB451
CmoCh04G009100	Cucumber (Gy14) v1	cgycmoB0229
CmoCh04G009100	Melon (DHL92) v3.5.1	cmomeB702
CmoCh04G009100	Watermelon (Charleston Gray)	cmowcgB641