CmaCh11G016920 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G016920
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionShort hypocotyl in white light1 protein
LocationCma_Chr11 : 11169779 .. 11174802 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATCCTCAACAACTGTCAACCATCGTTTTTTGCTGAACAAAAAACGAAAGCATCTGCAAACGGCTGCTGTTCTTCCACAGCTGATCATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTTATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGTCCACCGGATTTCTCTTCCCGTCTATTCACCTTTGTTCCTGTGTTTTTGTTCTCAATCTGCTCGATCTCTTCCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGATTTCGACATAATCGGTGGCGAGGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCTATCCCTACTAAACTGGTAGATGTTTTTTTTTTTCTTGTTCATAAATAAGATTACTCATTAAATTTTTATCTACGAATTGTGGTTAGTCAATTTTGCATTAGAAGTTGATTTTCTCAGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTAACTGCATCGATATTTAGCCCTTTTATTGCGTTTCCTTTAGTATTTCCATATGGATTTGTGTCCTCAGTAATAGATAGTTAGCTGTAAACTTTCATTGCAAAAGAGAAATGCGTGTTTGAAATTCGACTATAATAATACAGATATTTTAGTTTGGTTATGGAGAAGGGGGTGAAAGAATTGTTATGACACTTGTTCTTGTTCAATTGGATATGCATGGAAAACGTAGCACCCAAAGAAGAGATTTCTTGTCCTCCGTTGGGAGATTGTATTTCTGTTAGGGAACTTTGGCCAGAAAGTAAATGGAAAACTTTTTGTAAAGAAGAAGAATTGTCAGTTGGTTTTATACATGGAATTGCTGGTCTTCGGTTCGTTGTCCCCCAAAAAATTAGTTGTAATTGTGGTATTTGTTCTATTTTCGTTAAATCGAGTCTCTTTGTAACTTCTTCAGTATGGCTAATGTCCAGGGCTACCCCCCCTCCTAGAGATGTCTTGAGATTGAATTCAACTTTATAAATCTTCTCATATGAACAGTCGGAGTAAACCAATATTGTCGTTGGAAACTTTTCGAAACCAGTGAGTATCTCTTAAATTGACGGTATTCATACTGATTAAGGGTGCCATCTGCTCGGCTCTAGTTAGACGCTGGATATGGTTAAAAATGAACCTAAACGTCATTTGGCCTTGTTCGCTGCATTCATCAGAAGTAGTGAAAAGTACTAGTCCAATGATGTGGATTGCCTATTGAATTTGCTTGTGCTTGTGGATAGTTCGTGCTAAACTTCACTGATGGCAAGATCTAAACGAGACAAGTCATTCTTATCCATCAGAATCACTGGCCAACAATAATATGATCCATCCGAATCACTGGGCAATAGTAACATTAGATATATGTATGCACCCTTCTGGAGGGTTTATTTACCTACACACTACAGTTTTGTTATTGGGATAGGGCAAAAGAATAAATCTAGATGGTATTTTATTATGAGATCTCACATTGGTTGGGGAGGAGAATGAAATATTCTTTAGAATGTGGAAAGCTCTACCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGAGGTAGGTTTAGGCCATTACAAATGGTATCAGAGCCAGACACAGGGCGAGTGCCAGCGAGGAGGTTGAGACCCGAAGGGGTGGACACGAGGCGGTGTGCCAACAAGTACGCTGGGCCCTAAGGGGGTGGATTGGGGTGTTCCACATCGAATGGAGAAGGGAACGAATGTCAGCAAGGATGCTGGGCCCAAAGGGGGGTAGATTGTGAGATCCCACATCAGTTGGAGAGGAGTACAAAACATTCTTTATAAGAGTGTGAAACCTTCTTCAAAACATTCTTGAAGGAAAGCCTGAAAAAGAAAACCTAAAAAGGACAATATCTGCTAGCAGTGAGCTTGGGCCGTTATGATATTTGACTTTGTTTGTTGTCTACTCAGAAATAGATCAAAGTGCTGGTGTGTTGATGTAGATTGATTATTGAGTTTGATGGTGGTCCGTGGTTGTAGACAGCATGCATAAAATTTCTGTTATATTGAGATATAGATAGTTGGAGTATGCGACACCATCTGTCTCTCTAGTGGGAATAAGTGAACCTACAGACTTTGCTAGAGGTTTTAATTATCTACACACATAGTACTTTTTATTGTTTATGAGAAAAGCAAACCTTTCATGGAGGAAAAATGAAGGATTACGAAGGGCCTACAACAAGAAAGGCCCCACAAAAAATAGGCTTACTAAAACAAATGGGGACTTCAATCAAACAAAAGAAGACCAACAGGGTAATTATGAAGGCCTTAAAGCCCAAAGGGAGATGTGGAATCTAACAAGGGACCACACCTCCTATTTAGGTCTCTCAATCCCTAAAAATTCTGTTATTTCTTCCTACCCAAAAGCCTCACAAAATCACGAAAACCTTGGCTAGCCACAGAAAACGCCCCCCATCATGAAAGTGCAGGTGAAGCAAGAGTTCTTTAATCAAAGAGCTACACCCTCCAGGTCGAGTTAAATGAAAATTGAAAGCCTGGAAGAAGCAACTCCAAACTGAGAATGCTTAGTCATAGCATCTCCCTGCAGGTGGTCAAGATCCCCAACCTGCCCGCCTACAGAGAATACAACACGGAGGCCCTAACAGACCCATCTATACCTATACACTTATAGCACTATTAGAGGATATGACTATAGGGACAACCTAGGGTTGTATTTAACTTTTTTTTTCTTTTTTTTAATCAATAGTGAGAAGTACAGGCCTGTTGGCGTGGATTGACTATTGAGTTTGCTGGTTGTGGTGGTTGTAGACAATAGTGTAATAGACCAAGCCCACTACTAGCAGATATTGTCCTCTTTTGGTTTTTCCTTCCGAGAAGGTTTTAAAATGCATTCCAAGGGAGAAGTTTCCACACCTTTATAAGGAATGCTTCATTCTTCTCTCCAATCGATTTGGGATCTCACAATCCACCCCCCTTGGGGGCCTAGTGTCCTCACTGGTACACCGCCCGGTGTTTGGCTTTGATACCATTTGTAACAGCTCAAGTCCACCGGTAGCAGATATTTTCTTCTTTAGGCTTTCCCGTCTAAGCTTTCCCTCAAGGTTTTAAAAGCGTCCACTAGGGAGAGGTTTCTACACCTTTATAAAGAATGCTTCGTTCTCTTCTCCAACCGATGTGGGATCTCACAAGTAGGCTTTCAGGAGACGGTCTAAAATGGTTCTAGTATAGAAAGAACTGGAAACTTTCAACGAGCTAAAACTAATAAAGGTCGATAGGAAGTTTCAGAATTTCTTGACAAAGTTCGTTCTCCGAAGATATCCATGGAAGAATAGTTTTGTTGATGTAAGAATACTTTTATGGGTGCATTCTTGCATCCTTATTGAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCATCGACTCTAGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCATCGACTCTAGTGGTGTCATGTGTAGCTGAGGGTTAGATTTCTCAGAACTATATACTTTTATCTCCTTTCTTTGTGCTTGGCCTTTATTTCTGCACGTCTTTGCTCTCTTCTAGTTTCAATTTTCTCAATCATGCCACCTTCAATAGTGAAATAAAAAAGAAAAAAGAACACTTATTTCCCCTGCTGCTTTGTGAAATCTTAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGATGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGAATTCCTCTCACTTAACTACTTATACGTTATAAGTGACAAGGTTAGTGATGACACATTAAAAAGAAAAAAGGAAGATAATTAGAATAAAATAGGCTTGGTTGCATAGCCTTCATACTTATTTCATGGTCAGTAAATTCTTCTTTCTCTAAACTTCGTATAAAATTGTTTTAGTCCTTGCCAAAAGTTTTCATTAGTAGTTAAAGGGGGTGGGTTTCGAAACGAAATCGGATTTTTGGAAATGCCTTACGAAAATAGCTGCAAGGACTACAACAACTTTCTATGCAAAGTTTAGGGACTAAAATAGTAAAACATTTCGAAGTTTAAAGATCAAAATAAAATATGCATGAAAGTTTGAATATCATAGTCGAGTTTAAACAGCTGGAATTCTGTTCTATATGATTCAATATAATGTTGTCCTTGTAGCTTTCTGTAAACTATGAAAGAATTTGTTCTTTTTCCTCAAATATTTAGATCACGAGTAGAAACAGCAAGGGAGGGTAGCTTCTGATGTAATATTATGGGGCAGATTTGGTGTATTATTTGGTTGTAATGTTTTTTTTTTTTTTGTGCAATGAAATTGGATTCGTATAAAAAACGAAATGAAATGAAAAGAATGGCTTTGTCGTGGTACGGTAAGGTTCCGAAGTCCCAC

mRNA sequence

ATAATCCTCAACAACTGTCAACCATCGTTTTTTGCTGAACAAAAAACGAAAGCATCTGCAAACGGCTGCTGTTCTTCCACAGCTGATCATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTTATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGATTTCGACATAATCGGTGGCGAGGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCTATCCCTACTAAACTGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGATGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGAATTCCTCTCACTTAACTACTTATACGTTATAAGTGACAAGGTTAGTGATGACACATTAAAAAGAAAAAAGGAAGATAATTAGAATAAAATAGGCTTGGTTGCATAGCCTTCATACTTATTTCATGGTCAGTAAATTCTTCTTTCTCTAAACTTCGTATAAAATTGTTTTAGTCCTTGCCAAAAGTTTTCATTAGTAGTTAAAGGGGGTGGGTTTCGAAACGAAATCGGATTTTTGGAAATGCCTTACGAAAATAGCTGCAAGGACTACAACAACTTTCTATGCAAAGTTTAGGGACTAAAATAGTAAAACATTTCGAAGTTTAAAGATCAAAATAAAATATGCATGAAAGTTTGAATATCATAGTCGAGTTTAAACAGCTGGAATTCTGTTCTATATGATTCAATATAATGTTGTCCTTGTAGCTTTCTGTAAACTATGAAAGAATTTGTTCTTTTTCCTCAAATATTTAGATCACGAGTAGAAACAGCAAGGGAGGGTAGCTTCTGATGTAATATTATGGGGCAGATTTGGTGTATTATTTGGTTGTAATGTTTTTTTTTTTTTTGTGCAATGAAATTGGATTCGTATAAAAAACGAAATGAAATGAAAAGAATGGCTTTGTCGTGGTACGGTAAGGTTCCGAAGTCCCAC

Coding sequence (CDS)

ATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTTATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGATTTCGACATAATCGGTGGCGAGGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCTATCCCTACTAAACTGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGATGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGA

Protein sequence

MSLPAALSPPSLYSIPYSQPPLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS
Homology
[Close]
BLAST of CmaCh11G016920 vs. TrEMBL
Match: A0A0A0K2W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070780 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.7e-81
Identity = 166/205 (80.98%), Postives = 184/205 (89.76%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPYSQPPLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDD 60
           MSLPA LSPPSL+SIP SQ P  TS TS+LSH + IS+TLLRA+RRTSNFSQGVD+ VDD
Sbjct: 1   MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDD 60

Query: 61  RRNWNRSISSDFDIIGGEDDEDDEDEENE--EEDRSLDLLVRFVENVFRKVSKRARKAVR 120
           RRNWNRS   DFD+IGGE++E++E++E+E  EEDRSLDLLVRFVEN+FRK S+RARKAVR
Sbjct: 61  RRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFVENIFRKSSRRARKAVR 120

Query: 121 SVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 180
           SVLP SIPTKLV FSVNGVLMLAFLW+LKAFLEVICTLGTAVFVSILIIRGVW GILYLQ
Sbjct: 121 SVLPPSIPTKLVAFSVNGVLMLAFLWVLKAFLEVICTLGTAVFVSILIIRGVWIGILYLQ 180

Query: 181 DIRSHRFDRLDDDQHHAWTGAQPAS 204
           D RSHR  +LDDDQHHAWTGAQPAS
Sbjct: 181 DTRSHRLGQLDDDQHHAWTGAQPAS 202

[Close]
BLAST of CmaCh11G016920 vs. TrEMBL
Match: A0A061E0E9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007264 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.7e-54
Identity = 128/208 (61.54%), Postives = 156/208 (75.00%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPYSQPPLPT-SRTSIL---SHSLQISHTLLRASRRTSNFSQGVDH 60
           MS    LSP  L   PY +PP    S   IL   +HS Q    LL ASRR  NF QG D+
Sbjct: 1   MSSTVTLSPTFLAGFPYRKPPSHFFSNPKILLLKTHSFQ----LLLASRRIPNFPQGTDN 60

Query: 61  LVDDRRNWNRSISSDFDIIG-GEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARK 120
           LVD  RNW RSI+S+FD    G++DED++++E+E+EDRSLDLL+RFV+NVFRK+SKRARK
Sbjct: 61  LVDGPRNWGRSITSEFDDDQEGDEDEDEDEDEDEDEDRSLDLLIRFVQNVFRKISKRARK 120

Query: 121 AVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGIL 180
           AVR+VLP SI TKLVGFSVNGVLMLAFLW+LKAFLEV+CTLG+ VFVS+L+IRG+W G+ 
Sbjct: 121 AVRAVLPVSISTKLVGFSVNGVLMLAFLWVLKAFLEVVCTLGSIVFVSVLLIRGIWMGVT 180

Query: 181 YLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           Y+Q+ R  R + L DDQ  AWTG  PA+
Sbjct: 181 YVQESRDQRINELVDDQ-RAWTGTHPAT 203

[Close]
BLAST of CmaCh11G016920 vs. TrEMBL
Match: V4RNQ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029333mg PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.8e-52
Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 1 

Query: 41  LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVR 100
           LRASRR+SN SQ  D+ V+D RNWN +I+ +FD     D +DDED+E EEEDRSLDLLV+
Sbjct: 36  LRASRRSSNISQVNDNFVEDPRNWNHAIAREFD-----DYDDDEDDEAEEEDRSLDLLVK 95

Query: 101 FVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAV 160
           FVENVF+KVS++ARKAVRSVLPQSI   LVGFSVNGVL+LAFLW+LKAFLEV+CTLGT V
Sbjct: 96  FVENVFKKVSRKARKAVRSVLPQSISKNLVGFSVNGVLILAFLWVLKAFLEVVCTLGTVV 155

Query: 161 FVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           FVSIL+IRGVWTG+ YLQ+ R+HR D L D ++ AW GAQPA+
Sbjct: 156 FVSILLIRGVWTGVTYLQESRTHRVDDL-DAENPAWRGAQPAA 192

[Close]
BLAST of CmaCh11G016920 vs. TrEMBL
Match: D7T3P4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00370 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 8.3e-51
Identity = 113/163 (69.33%), Postives = 133/163 (81.60%), Query Frame = 1 

Query: 41  LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVR 100
           LR+SRR S+FSQ  DHLVDD RNW R+ S      G ++DEDDED+E EEEDRSLDLLVR
Sbjct: 43  LRSSRRISHFSQEGDHLVDDPRNWTRNRSVVAGEYGDDEDEDDEDDE-EEEDRSLDLLVR 102

Query: 101 FVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAV 160
           FV+NVF+K+SKR RKAVRSVLP  I TKLVGFSV+GVLML FLW+LKAFLEVICTLG+ V
Sbjct: 103 FVQNVFKKISKRTRKAVRSVLPVPISTKLVGFSVDGVLMLTFLWVLKAFLEVICTLGSVV 162

Query: 161 FVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           FVSIL+IRG+WTG+ Y+Q+ R+H  + L DD H AWTG QP +
Sbjct: 163 FVSILVIRGIWTGVSYVQENRNHTGNELGDD-HRAWTGTQPTT 203

[Close]
BLAST of CmaCh11G016920 vs. TrEMBL
Match: A0A0B0NWW4_GOSAR (ATP phosphoribosyltransferase regulatory subunit OS=Gossypium arboreum GN=F383_00468 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.0e-50
Identity = 118/208 (56.73%), Postives = 148/208 (71.15%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPYSQPP-----LPTSRTSILSHSLQISHTLLRASRRTSNFSQGVD 60
           MS     SPP L   P  +PP              SHS Q     L ASRR  N+ QG+D
Sbjct: 1   MSFTVNYSPPFLTIFPNKKPPPFHFSCNPKTLRFKSHSFQP----LLASRRIPNYPQGID 60

Query: 61  HLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARK 120
           +LVD  RNW+RSI+S+FD       +D+ED++ EEEDRSLDLLVRFV+NVFRK+SKRARK
Sbjct: 61  NLVDGPRNWSRSITSEFD-------DDEEDDDEEEEDRSLDLLVRFVQNVFRKISKRARK 120

Query: 121 AVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGIL 180
           A+R++LP SI TKLVGFSV+GVL+LAFLW+LKAFLEV+CTLG+AVFV+IL+IRG+WTG+ 
Sbjct: 121 ALRAILPISISTKLVGFSVDGVLILAFLWVLKAFLEVVCTLGSAVFVTILLIRGIWTGVT 180

Query: 181 YLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           ++Q+ R HR      D   +W GAQPA+
Sbjct: 181 FMQESRDHRRINEPFDDPRSWNGAQPAT 197

[Close]
BLAST of CmaCh11G016920 vs. TAIR10
Match: AT4G33780.1 (AT4G33780.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 190.3 bits (482), Expect = 1.2e-48
Identity = 117/207 (56.52%), Postives = 146/207 (70.53%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPYSQPPLP----TSRTSILSHSLQISHTLLRASRRTSNFSQGVDH 60
           M   A++S PS  S+   + PL     T +T I + + +IS     ASRR+ +F  G D 
Sbjct: 1   MPFSASISSPSS-SVALLRSPLSFFIFTPKTLIFTRT-RISGFPYLASRRSRDFINGRDD 60

Query: 61  LVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKA 120
             DD R+WNR I  ++      D E+D+D+ +EEEDRSLDLL+RFVENVFRK+SKRARKA
Sbjct: 61  FADDTRSWNRKIKPEYGFDEDYDGEEDDDD-HEEEDRSLDLLLRFVENVFRKISKRARKA 120

Query: 121 VRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILY 180
           VRS+LP SI TKLVGFSVNGVL+LAFLWILKAFLEV CTLGT VF SIL+IRG+W G+ Y
Sbjct: 121 VRSILPVSISTKLVGFSVNGVLILAFLWILKAFLEVACTLGTIVFTSILLIRGLWAGVAY 180

Query: 181 LQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           +Q+ R++R + L DD   AW G QP S
Sbjct: 181 MQESRNNRINELADDP-RAWNGMQPVS 203

[Close]
BLAST of CmaCh11G016920 vs. TAIR10
Match: AT1G69935.1 (AT1G69935.1 short hypocotyl in white light1)

HSP 1 Score: 94.4 bits (233), Expect = 8.9e-20
Identity = 66/180 (36.67%), Postives = 101/180 (56.11%), Query Frame = 1 

Query: 22  LPTSRTSILSHSLQISHTLLRASRR---TSNFSQGVDHLVDDRRNWNRSISS-------- 81
           +  + T++ S S   S TL+ AS R    + FS     L    R  NRS++S        
Sbjct: 1   MAAATTTLSSSSSSPSLTLINASHRFVSVTPFSSNSIFLRRRFRRLNRSLASSSSHSRRR 60

Query: 82  ------------DFDIIGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVR 141
                       ++D++  +D   D+D+E +E + S+DLL+RF+ ++F+KVSKR +KA R
Sbjct: 61  YESDDRFFGGGDNYDVVPDDDGFSDDDDEEDERESSVDLLIRFLRSMFKKVSKRTKKASR 120

Query: 142 SVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 179
            +LP ++  +LV F+V+G+L+L  L I +AFLEVIC LG  VF  IL+IR  W    + Q
Sbjct: 121 RILPAAMSPRLVSFAVDGILLLGSLSITRAFLEVICNLGGTVFTVILLIRLFWAAASFFQ 180

[Close]
BLAST of CmaCh11G016920 vs. NCBI nr
Match: gi|659110111|ref|XP_008455053.1| (PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 1.7e-84
Identity = 171/205 (83.41%), Postives = 188/205 (91.71%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPYSQPPLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDD 60
           MSLPA LSPPSL+SIP SQPP PTSRTS+LSH  QIS+TLLRA+RRTSNFSQGVD+ VD+
Sbjct: 1   MSLPAVLSPPSLFSIPQSQPPFPTSRTSLLSHPFQISYTLLRATRRTSNFSQGVDNFVDE 60

Query: 61  RRNWNRSISSDFDIIGGEDDEDDEDEE--NEEEDRSLDLLVRFVENVFRKVSKRARKAVR 120
           RRNWNRS   DFD+IGGE++E++E+EE  +EEEDRSLDLLVRFVENVFRK S+RARKAVR
Sbjct: 61  RRNWNRS---DFDLIGGEEEEEEEEEEDDDEEEDRSLDLLVRFVENVFRKSSRRARKAVR 120

Query: 121 SVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 180
           SVLPQSIPTKLV FSVNGVLMLAFLW+LKAFLEVICTLGTAVFVSILIIRGVW GILYLQ
Sbjct: 121 SVLPQSIPTKLVAFSVNGVLMLAFLWVLKAFLEVICTLGTAVFVSILIIRGVWIGILYLQ 180

Query: 181 DIRSHRFDRLDDDQHHAWTGAQPAS 204
           D RSHR ++ DDDQHHAWTGAQPAS
Sbjct: 181 DTRSHRLEQFDDDQHHAWTGAQPAS 202

[Close]
BLAST of CmaCh11G016920 vs. NCBI nr
Match: gi|778724801|ref|XP_004136931.2| (PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 166/205 (80.98%), Postives = 184/205 (89.76%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPYSQPPLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDD 60
           MSLPA LSPPSL+SIP SQ P  TS TS+LSH + IS+TLLRA+RRTSNFSQGVD+ VDD
Sbjct: 1   MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDD 60

Query: 61  RRNWNRSISSDFDIIGGEDDEDDEDEENE--EEDRSLDLLVRFVENVFRKVSKRARKAVR 120
           RRNWNRS   DFD+IGGE++E++E++E+E  EEDRSLDLLVRFVEN+FRK S+RARKAVR
Sbjct: 61  RRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFVENIFRKSSRRARKAVR 120

Query: 121 SVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 180
           SVLP SIPTKLV FSVNGVLMLAFLW+LKAFLEVICTLGTAVFVSILIIRGVW GILYLQ
Sbjct: 121 SVLPPSIPTKLVAFSVNGVLMLAFLWVLKAFLEVICTLGTAVFVSILIIRGVWIGILYLQ 180

Query: 181 DIRSHRFDRLDDDQHHAWTGAQPAS 204
           D RSHR  +LDDDQHHAWTGAQPAS
Sbjct: 181 DTRSHRLGQLDDDQHHAWTGAQPAS 202

[Close]
BLAST of CmaCh11G016920 vs. NCBI nr
Match: gi|590687524|ref|XP_007042688.1| (Uncharacterized protein TCM_007264 [Theobroma cacao])

HSP 1 Score: 219.2 bits (557), Expect = 6.8e-54
Identity = 128/208 (61.54%), Postives = 156/208 (75.00%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPYSQPPLPT-SRTSIL---SHSLQISHTLLRASRRTSNFSQGVDH 60
           MS    LSP  L   PY +PP    S   IL   +HS Q    LL ASRR  NF QG D+
Sbjct: 1   MSSTVTLSPTFLAGFPYRKPPSHFFSNPKILLLKTHSFQ----LLLASRRIPNFPQGTDN 60

Query: 61  LVDDRRNWNRSISSDFDIIG-GEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARK 120
           LVD  RNW RSI+S+FD    G++DED++++E+E+EDRSLDLL+RFV+NVFRK+SKRARK
Sbjct: 61  LVDGPRNWGRSITSEFDDDQEGDEDEDEDEDEDEDEDRSLDLLIRFVQNVFRKISKRARK 120

Query: 121 AVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGIL 180
           AVR+VLP SI TKLVGFSVNGVLMLAFLW+LKAFLEV+CTLG+ VFVS+L+IRG+W G+ 
Sbjct: 121 AVRAVLPVSISTKLVGFSVNGVLMLAFLWVLKAFLEVVCTLGSIVFVSVLLIRGIWMGVT 180

Query: 181 YLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           Y+Q+ R  R + L DDQ  AWTG  PA+
Sbjct: 181 YVQESRDQRINELVDDQ-RAWTGTHPAT 203

[Close]
BLAST of CmaCh11G016920 vs. NCBI nr
Match: gi|568867095|ref|XP_006486880.1| (PREDICTED: uncharacterized protein LOC102621139 [Citrus sinensis])

HSP 1 Score: 216.9 bits (551), Expect = 3.4e-53
Identity = 117/163 (71.78%), Postives = 139/163 (85.28%), Query Frame = 1 

Query: 41  LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVR 100
           LRASRR+SNFSQ  D+ V+D RNWN +I+ +FD     D +DDED+E EEEDRSLDLLV+
Sbjct: 36  LRASRRSSNFSQVNDNFVEDPRNWNHAIAREFD-----DYDDDEDDEAEEEDRSLDLLVK 95

Query: 101 FVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAV 160
           FVENVF+KVS++ARKAVRSVLPQSI   LVGFSVNGVL+LAFLW+LKAFLEV+CTLGT V
Sbjct: 96  FVENVFKKVSRKARKAVRSVLPQSISKNLVGFSVNGVLILAFLWVLKAFLEVVCTLGTVV 155

Query: 161 FVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           FVSIL+IRGVWTG+ YLQ+ R+HR D L DD++ AW GAQPA+
Sbjct: 156 FVSILLIRGVWTGVTYLQESRTHRVDDL-DDENPAWRGAQPAA 192

[Close]
BLAST of CmaCh11G016920 vs. NCBI nr
Match: gi|567860188|ref|XP_006422748.1| (hypothetical protein CICLE_v10029333mg [Citrus clementina])

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-51
Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 1 

Query: 41  LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVR 100
           LRASRR+SN SQ  D+ V+D RNWN +I+ +FD     D +DDED+E EEEDRSLDLLV+
Sbjct: 36  LRASRRSSNISQVNDNFVEDPRNWNHAIAREFD-----DYDDDEDDEAEEEDRSLDLLVK 95

Query: 101 FVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAV 160
           FVENVF+KVS++ARKAVRSVLPQSI   LVGFSVNGVL+LAFLW+LKAFLEV+CTLGT V
Sbjct: 96  FVENVFKKVSRKARKAVRSVLPQSISKNLVGFSVNGVLILAFLWVLKAFLEVVCTLGTVV 155

Query: 161 FVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           FVSIL+IRGVWTG+ YLQ+ R+HR D L D ++ AW GAQPA+
Sbjct: 156 FVSILLIRGVWTGVTYLQESRTHRVDDL-DAENPAWRGAQPAA 192

The following BLAST results are available for this feature:
BLAST of CmaCh11G016920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh11G016920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2W4_CUCSA7.7e-8180.98Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070780 PE=4 SV=1[more]
A0A061E0E9_THECC4.7e-5461.54Uncharacterized protein OS=Theobroma cacao GN=TCM_007264 PE=4 SV=1[more]
V4RNQ0_9ROSI9.8e-5270.55Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029333mg PE=4 SV=1[more]
D7T3P4_VITVI8.3e-5169.33Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00370 PE=4 SV=... [more]
A0A0B0NWW4_GOSAR7.0e-5056.73ATP phosphoribosyltransferase regulatory subunit OS=Gossypium arboreum GN=F383_0... [more]
BLAST of CmaCh11G016920 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33780.11.2e-4856.52 FUNCTIONS IN: molecular_function unknown[more]
AT1G69935.18.9e-2036.67 short hypocotyl in white light1[more]
BLAST of CmaCh11G016920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110111|ref|XP_008455053.1|1.7e-8483.41PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo][more]
gi|778724801|ref|XP_004136931.2|1.1e-8080.98PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus][more]
gi|590687524|ref|XP_007042688.1|6.8e-5461.54Uncharacterized protein TCM_007264 [Theobroma cacao][more]
gi|568867095|ref|XP_006486880.1|3.4e-5371.78PREDICTED: uncharacterized protein LOC102621139 [Citrus sinensis][more]
gi|567860188|ref|XP_006422748.1|1.4e-5170.55hypothetical protein CICLE_v10029333mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0009787 regulation of abscisic acid-activated signaling pathway
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G016920.1CmaCh11G016920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35474FAMILY NOT NAMEDcoord: 8..203
score: 7.3
NoneNo IPR availablePANTHERPTHR35474:SF1SUBFAMILY NOT NAMEDcoord: 8..203
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh11G016920Cucsa.219030Cucumber (Gy14) v1cgycmaB0620
CmaCh11G016920Cla001614Watermelon (97103) v1cmawmB127
CmaCh11G016920Csa7G070780Cucumber (Chinese Long) v2cmacuB146
CmaCh11G016920MELO3C018531Melon (DHL92) v3.5.1cmameB098
CmaCh11G016920ClCG02G007130Watermelon (Charleston Gray)cmawcgB101
CmaCh11G016920CSPI07G06730Wild cucumber (PI 183967)cmacpiB143
CmaCh11G016920CmoCh19G005540Cucurbita moschata (Rifu)cmacmoB143
CmaCh11G016920CmoCh11G014280Cucurbita moschata (Rifu)cmacmoB117
CmaCh11G016920Lsi03G005990Bottle gourd (USVL1VR-Ls)cmalsiB116
CmaCh11G016920Cp4.1LG15g04310Cucurbita pepo (Zucchini)cmacpeB116
CmaCh11G016920Cp4.1LG04g07520Cucurbita pepo (Zucchini)cmacpeB154
CmaCh11G016920MELO3C018531.2Melon (DHL92) v3.6.1cmamedB106
CmaCh11G016920CsaV3_7G007690Cucumber (Chinese Long) v3cmacucB0171
CmaCh11G016920Cla97C02G033970Watermelon (97103) v2cmawmbB104
CmaCh11G016920CsGy7G006280Cucumber (Gy14) v2cgybcmaB895
CmaCh11G016920Carg23045Silver-seed gourdcarcmaB1025
CmaCh11G016920Carg16318Silver-seed gourdcarcmaB0630
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh11G016920CmaCh19G005400Cucurbita maxima (Rimu)cmacmaB149
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G016920Silver-seed gourdcarcmaB0405
CmaCh11G016920Silver-seed gourdcarcmaB0525
CmaCh11G016920Wax gourdcmawgoB0116
CmaCh11G016920Cucurbita maxima (Rimu)cmacmaB135
CmaCh11G016920Cucurbita maxima (Rimu)cmacmaB163
CmaCh11G016920Cucurbita moschata (Rifu)cmacmoB133
CmaCh11G016920Cucurbita moschata (Rifu)cmacmoB156
CmaCh11G016920Cucurbita pepo (Zucchini)cmacpeB114
CmaCh11G016920Cucurbita pepo (Zucchini)cmacpeB136
CmaCh11G016920Bottle gourd (USVL1VR-Ls)cmalsiB115