Cp4.1LG04g07520 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g07520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionShort hypocotyl in white light1 protein
LocationCp4.1LG04 : 4082695 .. 4088446 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCGCCTGAGTGTAGATGCCCATAACCAGCGTATCAACCCTAGGTAAATAGAAATTTTGGGCGGTTGCAATGAATATAACCATCGTTTTTTGTTCAGCAAAAAACGAAAGCATCTGCAAACGGCTGCTGTTCTTCCACAGCTGATCATGTCCTTACATGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCGTCATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGTCCACCGGATTTCTCTTCCCCTCTATTCGCCTTTGTTCCTGTGTTTTTGTTCTCAATCTGCTCGATCTATTCCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGACTTCGACATAATCGGTGGCGAAGATGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCCATCCCTACTAAACTGGTAGATGTTTTTCTTTTCTTGTTCATAAATAAGATTACCCATTAAATTTTTATCTACGAATTGTGGTTAGTCAATTGTGCATTAGAAATTGATTTTCTCAGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTAACTGCATCGATATTTAGCCCTTTTATTGCGTTTAGGATTTCCATATGGATTTGTGTCCTCAGTAATAGATAGTTAGCTGTAAACTTTCATTGCAAAAGAGAAATGCGTGTTCGAAATTCGACTATAAAAATGCAGATATTTTAGTTTGGTTATGGAGAAGGGGGTGAAAGAATTGTTATGACACTTAGTTCTTGTTCAATTGGATATGCATGGCAAACGTAGCACCCAAAGAAGAGATTTCTTGTCCTTCGTTGAGAGATGGTATTTCTGTTAGGGAACTCTGGCCAGAAAGTAAATAGAAAACTTTTTGTGAAGAAGAAGAATTGTCGGTTGGTTTTATACATGGAATTGCTGGTCTTCGGTTCGTTGTCCCCCAAAAAATGAGCTGTAATTGTGGTATTAGGTCTATTTTCGTTAAATTGAGATAAGAAAATGAACATTGATCTAGAATTTTTTTATGCTGATATTATATTNAACTTTATAAATCTTCTCATATGAACAGTCGTAGTAAACCAATATTGTCGTTGGAAAACTTTTCGAAACCTGTGAGTATCTCTTAAATTGACGGTATTCATACTGATTAAGGGTGTCATCTGCTCGGCTCTAGTTAGACGCTGGATATGGTTAAAAATGAACCTAAACGTCATTTGGCCTTGTTTGCTGCATTCATCAGAAGTAGTGAAAAGTACTAGTCCAATAATATGATCCATCCGAATCACTGGGCGATAGTAACATTAGATATATGTATGCACTCTTCTGGAGGGTTTATTTACCTGCACACTAACAGTTTTTTTATCGGGATAGGAAAAAGAATAAACCTAGATGGTATTTTATTGTGAGATCCCTCATCGGATGAGGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGTGATATGGAAGCTCGAAAGGGAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGACTTGGGCCGTTACAAAAGTTATCAGAGCCAGACATCGGGAGATGTGCCAGTGAGGAGGCTGAGCCCCAAAGGGTGGTGTACACGAGGCGGTGTACCAGGAAGGACGCTGGGCTTCGAAGGGGGGTGGATTAGGGGATCCCACATGAATTGGAGAAGGGAACGAGTACCAGCAAGAACGCTGGGCCCCGAAGGGAGTGAATTGTGAAATCTTACATCGGTTGGGGAGGAGAATGAAACATTCTTTATAAGGGCGTGGAAACCTCTTCTTAGCAGACGTGTTTTAAAAACCTTAAGGGGAAGCCTGAAAGGGAAAACCCAAAGAAGACGGGACAATATCTGCTAGCGGTGGGCTTGAGCCGTTACAGTATTTGACTTTGTTTGTTGTCTACTCAGAAGTAGATCAAAGTGCTGGTCTGTTGATGTAGATTGATTATTGAGTTTGATGGTGGTCCGTGGTTGTAGACAGCATGAATGAAATTTCTGTTATAGCGAGATATAGATAGTCGGAGTATTCGGCATCATCTGTCTCTCTAGTGGGAATACACTACAGACTTTGCTAGAGGTTGTAATTACCTACTCACGTAGTACTTTTTATTTTTATGAGAACTGCAAACCTTTCATGGATGAAAAATGAAGGATTACGAAGGGCATACAACAAGAAAGGCCCCACAAAAAATAGCTAGACTAAAACAAATGGAGACTTCAATCAAACAAAGAAGACCAACAGGGTAATTATGAAGGCCTTAAAGCCCAAAGGGAGATGTGGAATCTAACAAGGGACCACACCTCCTATTTAGGTCGATCAATCCCTAAAAGTTCTGTTATTTCGTCCTGCCCAAAAGCCCCACAAAATCACGCAAACCTTGGCTAGCCACAGAAAACGCGCCCCCTATCATAAAAGGGCGGGTGAAGCAAGAGTTCCGTAGTCAAAGAGCTACACCCTCCAGGTCGAGTTGAATGAAAATTGAAAGCCTGGAAGAAGCAACTCCAAACTGAGAATGCTTAGTCATAGCATCTCCCTGCAAGGTGGTCAAGATCCTCAACCCGCCCGCCTACAGAGAATACAACACGTAGGCCCTAACAGACCCATCTTATACCAATACACTTATAGCACTATTAGAGGATATGACTAAAGGGACAACTTAGGGTTGTATTTGACTTTTTTTTCTTTTTTTTAATCAATAGTGAGAAGTAGGCGTGGATTGACTATTGAGTTTGCTGGTTGTGGTGGTTGTAGATAGTAGTGTAACAGCCCAAGCCCGGGCTAGCAGATATTGTCCTCTTTGGCTTTTCCGTTCCGAGAAGGTTGTAAAACGCATTCCAAGGGAGAAGTTTCCACACCTTTATAAGGAATGCTTCATTCTTCTCTCCAATCGATTTGGGATCTCACAATCCACCCCCCTTGAGGGCCTAGCGTCCTCGCTGGTACACCGCCCGGTGTCTGGCTTTGATACTATTTGTAATAGCTCAAGCCCACTGCTAGCAAATATTGTCCTCTTTAGGCTTTCCCTTCTAAGCTTTAAAATGCGTCCACTAGGGAGAGATTTGCACACCCTTATAAGGAATACTTCGTTCTCTTCTCCAACTGATGTGGGATCTCATAAGTAGGCTTTCAGGAGACGGTCTAAAATTGTTCTAGTATAGAAAGAACGGGAAACTTTCAACGAGCTAAAACTAATAAAGGTCGATAGGAAGTTTCAGAATTTCTTGACAAAATTCGTTCTACGAAGATATCCATGGAAGAATAGTTTCGTTGATGTAAGAATACTTTTATTGATGTATTCTTGTTGAGAAAGTTTTTTTTTGCCATCGACTCTAGTGGTGTCATGTGTAGCCGAGGGTTAGATTTCTCAGAACTATATACTTCTAGCTCCTTTCTTTGTGCTTGGCCTTTATTTCTGCACGTCTTTGCTCTCTTCTAGCTTCAATTTTCTCAACAATACCACCTTCAATAGAGAAAGAACAAAAGAAAAAAGAACTTATTTGTATGAATTAGATCATATCTAATTTCCAACGTTTCCCCCTTCAGAAAAAAGAACACTTATTTCCTCTGCTGCTTTGTGAAATCTTAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGACGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGAATTCCTCACTTAACTACATATACGTTATAAGTGGCAAGGTTAGTGATGACACATAAAAAGAAAAAAAAAGGAAGATAAAGATTAGAATAAAATAGGCTTGGTTTCATAGCCTTCATACTTATTTCATGGTCAGTAAATTATTCGTTCTCTAAACTTCGTATAAAAAATTGTTTTAGTCCTTGCCAAAAGTGTTCATAAATAGTTAAACATAAGTTTAGGGGTGGGTTTCGAAACGAAATCGGATTTTTGGAAATGCTTTACGAAAATAGCTGCAAGGACTATAACAACTTTCTATGCAAAGTGTATGGACTAAAATAGTAAAACATTTCGAAGTTTAAAGATCAAAATAAAATATGCATGAAAGTTCGAATATCATAGTCGAGTTTAAACGAGTATAGCTGGAATTCTGTTCTCTATGATTCAATATAATTTTGTCCTTGTAGCTTTCTGTAGACTATGAGTAGACTATGAAAGTATTTGTTCTTTTTGCCTCAAATCTTTAGATCATGAGTAGAAACAGCAAGGGAGGGTAGCTTCTGATGTAATATTATGAGGCAGATTTGGTGTATTATTTGGTTGTAATGGTTTTTTTGCGCAATGAAATTGGATTCGTAATAAAAAAACGAAACGAAATGAAAGGATACCTGAACACATTGTTGTACTGAGGCTGAGTATGTGTTGTAGTACTGGGGCTGAGTACAACAGATTGTTAAGAATATAGTAAAAACACATGGTTACCGAGACTGAGTACGAAATTAATATTTTCGATACAACACATTAAGAATACATTGTTGTACTGAGGCTGAGTACGTGACAATAACTGAATCTGGAAAGAAGACGTTATGGATGATTGATTATTTGGAAGAATTGAGCAAGAAGCAGCACAAAAAGATTCTTTATAGAGATAGTCAAAGTGTCATACAGTTGGTGAGGAACCTGATCTATCATTTTAAGATAAAACACGGAAGGTGATACCATTTCACTTGTAGGTTAGTGGAAGATGGTGATGTATTTTGAGAAGATAGAGGGTGCAAAGAATCTAGCAAACATGTTGACAAAATGTGTTGATGTTGGAATATTAGGGTTGTGCAAAGTGGTGCAGTGAAGATGCTCATGGATGGTCGTTTGAGAATGAAATTCTTGATTGACTAGATCGGCTAGAATTGTTAGGTTATGGAGCCTATTGCTCATTTATAGTTTATCAACGTTATACATAGTAAAACTATATATGGTAAATGGTAAATTATCATAAATAGTAAATAGTTATATACAGGAAAAAAAACTATATGTATGTATTTATACGGTATCATATATATAGCTTTGAAAATGTACTCCTGTCCTCTGTATTCATGTAGATCTAGTGTGTGCGTTGTTGAGTGATCCTAACAATATTAAATCATAGGCATTGAAATTCTTAATCCAAAAAATAGACGATACAAAAATATTGTGACACTAAAAAAAAATTGCATAAATCAATTGAGACTATACTTGAATGAAAACGATCTCGAGAATAGGAGTCTAAGTTACTATTTATACCCACAAAATCTACCTTCATTTTCAGTGGCTCAATCACGAGAACTCGAAGATTAAACGTAGTTTACTTAGAGCAATTCTATATCGGGTGTCGAATTCAAATATGCTGAAAGAACTCACTCTTAGAAGCGAATGATGTAGAGGAATGCCTGAGCCATCAGCGGTCGAATTCAAATTTCAAATTCTGATCCCAATCTCGGGCGCGGAGGGCGATACAAATA

mRNA sequence

TGGCGCCTGAGTGTAGATGCCCATAACCAGCGTATCAACCCTAGGTAAATAGAAATTTTGGGCGGTTGCAATGAATATAACCATCGTTTTTTGTTCAGCAAAAAACGAAAGCATCTGCAAACGGCTGCTGTTCTTCCACAGCTGATCATGTCCTTACATGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCGTCATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGACTTCGACATAATCGGTGGCGAAGATGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCCATCCCTACTAAACTGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGACGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGAATTCCTCACTTAACTACATATACGTTATAAGTGGCAAGGTTAGTGATGACACATAAAAAGAAAAAAAAAGGAAGATAAAGATTAGAATAAAATAGGCTTGGTTTCATAGCCTTCATACTTATTTCATGGTCAGTAAATTATTCGTTCTCTAAACTTCGTATAAAAAATTGTTTTAGTCCTTGCCAAAAGTGTTCATAAATAGTTAAACATAAGTTTAGGGGTGGGTTTCGAAACGAAATCGGATTTTTGGAAATGCTTTACGAAAATAGCTGCAAGGACTATAACAACTTTCTATGCAAAGTGTATGGACTAAAATAGTAAAACATTTCGAAGTTTAAAGATCAAAATAAAATATGCATGAAAGTTCGAATATCATAGTCGAGTTTAAACGAGTATAGCTGGAATTCTGTTCTCTATGATTCAATATAATTTTGTCCTTGTAGCTTTCTGTAGACTATGAGTAGACTATGAAAGTATTTGTTCTTTTTGCCTCAAATCTTTAGATCATGAGTAGAAACAGCAAGGGAGGGTAGCTTCTGATGTAATATTATGAGGCAGATTTGGTGTATTATTTGGTTGTAATGGTTTTTTTGCGCAATGAAATTGGATTCGTAATAAAAAAACGAAACGAAATGAAAGGATACCTGAACACATTGTTGTACTGAGGCTGAGTATGTGTTGTAGTACTGGGGCTGAGTACAACAGATTGTTAAGAATATAGTAAAAACACATGGTTACCGAGACTGAGTACGAAATTAATATTTTCGATACAACACATTAAGAATACATTGTTGTACTGAGGCTGAGTACGTGACAATAACTGAATCTGGAAAGAAGACGTTATGGATGATTGATTATTTGGAAGAATTGAGCAAGAAGCAGCACAAAAAGATTCTTTATAGAGATAGTCAAAGTGTCATACAGTTGGTGAGGAACCTGATCTATCATTTTAAGATAAAACACGGAAGGTGATACCATTTCACTTGTAGGTTAGTGGAAGATGGTGATGTATTTTGAGAAGATAGAGGGTGCAAAGAATCTAGCAAACATGTTGACAAAATGTGTTGATGTTGGAATATTAGGGTTGTGCAAAGTGGTGCAGTGAAGATGCTCATGGATGGTCGTTTGAGAATGAAATTCTTGATTGACTAGATCGGCTAGAATTGTTAGGTTATGGAGCCTATTGCTCATTTATAGTTTATCAACGTTATACATAGTAAAACTATATATGGTAAATGGTAAATTATCATAAATAGTAAATAGTTATATACAGGAAAAAAAACTATATGTATGTATTTATACGGTATCATATATATAGCTTTGAAAATGTACTCCTGTCCTCTGTATTCATGTAGATCTAGTGTGTGCGTTGTTGAGTGATCCTAACAATATTAAATCATAGGCATTGAAATTCTTAATCCAAAAAATAGACGATACAAAAATATTGTGACACTAAAAAAAAATTGCATAAATCAATTGAGACTATACTTGAATGAAAACGATCTCGAGAATAGGAGTCTAAGTTACTATTTATACCCACAAAATCTACCTTCATTTTCAGTGGCTCAATCACGAGAACTCGAAGATTAAACGTAGTTTACTTAGAGCAATTCTATATCGGGTGTCGAATTCAAATATGCTGAAAGAACTCACTCTTAGAAGCGAATGATGTAGAGGAATGCCTGAGCCATCAGCGGTCGAATTCAAATTTCAAATTCTGATCCCAATCTCGGGCGCGGAGGGCGATACAAATA

Coding sequence (CDS)

ATGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCGTCATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGACTTCGACATAATCGGTGGCGAAGATGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCCATCCCTACTAAACTGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGACGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGA

Protein sequence

MPLFHRRPSIPFVILSRHYQPLGPRFSHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS
Homology
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BLAST of Cp4.1LG04g07520 vs. TrEMBL
Match: A0A0A0K2W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070780 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.1e-70
Identity = 144/175 (82.29%), Postives = 160/175 (91.43%), Query Frame = 1 

Query: 27  SHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENE- 86
           SH + IS+TLLRA+RRTSNFSQGVD+ VDDRRNWNRS   DFD+IGGE++E++E++E+E 
Sbjct: 31  SHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEE 90

Query: 87  -EEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKA 146
            EEDRSLDLLVRFVEN+FRK S+RARKAVRSVLP SIPTKLV FSVNGVLMLAFLW+LKA
Sbjct: 91  DEEDRSLDLLVRFVENIFRKSSRRARKAVRSVLPPSIPTKLVAFSVNGVLMLAFLWVLKA 150

Query: 147 FLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           FLEVICTLGTAVFVSILIIRGVW GILYLQD RSHR  +LDDDQHHAWTGAQPAS
Sbjct: 151 FLEVICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS 202

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BLAST of Cp4.1LG04g07520 vs. TrEMBL
Match: A0A061E0E9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007264 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-52
Identity = 115/174 (66.09%), Postives = 142/174 (81.61%), Query Frame = 1 

Query: 27  SHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIG-GEDDEDDEDEENE 86
           +HS Q    LL ASRR  NF QG D+LVD  RNW RSI+S+FD    G++DED++++E+E
Sbjct: 35  THSFQ----LLLASRRIPNFPQGTDNLVDGPRNWGRSITSEFDDDQEGDEDEDEDEDEDE 94

Query: 87  EEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAF 146
           +EDRSLDLL+RFV+NVFRK+SKRARKAVR+VLP SI TKLVGFSVNGVLMLAFLW+LKAF
Sbjct: 95  DEDRSLDLLIRFVQNVFRKISKRARKAVRAVLPVSISTKLVGFSVNGVLMLAFLWVLKAF 154

Query: 147 LEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           LEV+CTLG+ VFVS+L+IRG+W G+ Y+Q+ R  R + L DDQ  AWTG  PA+
Sbjct: 155 LEVVCTLGSIVFVSVLLIRGIWMGVTYVQESRDQRINELVDDQ-RAWTGTHPAT 203

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BLAST of Cp4.1LG04g07520 vs. TrEMBL
Match: V4RNQ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029333mg PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.4e-52
Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 1 

Query: 37  LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVR 96
           LRASRR+SN SQ  D+ V+D RNWN +I+ +FD     D +DDED+E EEEDRSLDLLV+
Sbjct: 36  LRASRRSSNISQVNDNFVEDPRNWNHAIAREFD-----DYDDDEDDEAEEEDRSLDLLVK 95

Query: 97  FVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAV 156
           FVENVF+KVS++ARKAVRSVLPQSI   LVGFSVNGVL+LAFLW+LKAFLEV+CTLGT V
Sbjct: 96  FVENVFKKVSRKARKAVRSVLPQSISKNLVGFSVNGVLILAFLWVLKAFLEVVCTLGTVV 155

Query: 157 FVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           FVSIL+IRGVWTG+ YLQ+ R+HR D L D ++ AW GAQPA+
Sbjct: 156 FVSILLIRGVWTGVTYLQESRTHRVDDL-DAENPAWRGAQPAA 192

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BLAST of Cp4.1LG04g07520 vs. TrEMBL
Match: D7T3P4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00370 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.3e-51
Identity = 113/163 (69.33%), Postives = 133/163 (81.60%), Query Frame = 1 

Query: 37  LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVR 96
           LR+SRR S+FSQ  DHLVDD RNW R+ S      G ++DEDDED+E EEEDRSLDLLVR
Sbjct: 43  LRSSRRISHFSQEGDHLVDDPRNWTRNRSVVAGEYGDDEDEDDEDDE-EEEDRSLDLLVR 102

Query: 97  FVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAV 156
           FV+NVF+K+SKR RKAVRSVLP  I TKLVGFSV+GVLML FLW+LKAFLEVICTLG+ V
Sbjct: 103 FVQNVFKKISKRTRKAVRSVLPVPISTKLVGFSVDGVLMLTFLWVLKAFLEVICTLGSVV 162

Query: 157 FVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           FVSIL+IRG+WTG+ Y+Q+ R+H  + L DD H AWTG QP +
Sbjct: 163 FVSILVIRGIWTGVSYVQENRNHTGNELGDD-HRAWTGTQPTT 203

[Close]
BLAST of Cp4.1LG04g07520 vs. TrEMBL
Match: A0A0K9QRN1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148810 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 116/185 (62.70%), Postives = 146/185 (78.92%), Query Frame = 1 

Query: 17  RHYQPLGPRFSHSLQISHTL--LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGE 76
           RH Q L P   H L +  T+  L+ASRR+S+ S   D L++DRR W+R     FD  G E
Sbjct: 22  RHQQFLSP--PHQLHLLRTIPALQASRRSSSQS---DELINDRRKWSR-----FDFDGYE 81

Query: 77  DDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVL 136
           DD+D+EDEE+EEEDRSLDLL+RFVEN+FRKVSKRARKAVRSVLP +I TKLVGF+VNG++
Sbjct: 82  DDDDEEDEEDEEEDRSLDLLIRFVENIFRKVSKRARKAVRSVLPIAISTKLVGFAVNGLI 141

Query: 137 MLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTG 196
           +L+FLW+LKAFLEVICTLG+AVFVSIL+IRGVW+ +LYLQ+ RS   + +DDD   +W+ 
Sbjct: 142 ILSFLWVLKAFLEVICTLGSAVFVSILLIRGVWSAVLYLQEGRSRHMNGIDDDDPPSWSR 196

Query: 197 AQPAS 200
           AQP +
Sbjct: 202 AQPVT 196

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BLAST of Cp4.1LG04g07520 vs. TAIR10
Match: AT4G33780.1 (AT4G33780.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 192.2 bits (487), Expect = 3.1e-49
Identity = 104/161 (64.60%), Postives = 125/161 (77.64%), Query Frame = 1 

Query: 39  ASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVRFV 98
           ASRR+ +F  G D   DD R+WNR I  ++      D E+D+D+ +EEEDRSLDLL+RFV
Sbjct: 45  ASRRSRDFINGRDDFADDTRSWNRKIKPEYGFDEDYDGEEDDDD-HEEEDRSLDLLLRFV 104

Query: 99  ENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFV 158
           ENVFRK+SKRARKAVRS+LP SI TKLVGFSVNGVL+LAFLWILKAFLEV CTLGT VF 
Sbjct: 105 ENVFRKISKRARKAVRSILPVSISTKLVGFSVNGVLILAFLWILKAFLEVACTLGTIVFT 164

Query: 159 SILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           SIL+IRG+W G+ Y+Q+ R++R + L DD   AW G QP S
Sbjct: 165 SILLIRGLWAGVAYMQESRNNRINELADDP-RAWNGMQPVS 203

[Close]
BLAST of Cp4.1LG04g07520 vs. TAIR10
Match: AT1G69935.1 (AT1G69935.1 short hypocotyl in white light1)

HSP 1 Score: 95.5 bits (236), Expect = 3.9e-20
Identity = 61/168 (36.31%), Postives = 98/168 (58.33%), Query Frame = 1 

Query: 8   PSIPFVILSRHYQPLGPRFSHSLQISHTLLRASRR-TSNFSQGVDHLVDDRRNWNRSISS 67
           PS+  +  S  +  + P  S+S+ +     R +R   S+ S        D R +      
Sbjct: 15  PSLTLINASHRFVSVTPFSSNSIFLRRRFRRLNRSLASSSSHSRRRYESDDRFFGGG--D 74

Query: 68  DFDIIGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLV 127
           ++D++  +D   D+D+E +E + S+DLL+RF+ ++F+KVSKR +KA R +LP ++  +LV
Sbjct: 75  NYDVVPDDDGFSDDDDEEDERESSVDLLIRFLRSMFKKVSKRTKKASRRILPAAMSPRLV 134

Query: 128 GFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 175
            F+V+G+L+L  L I +AFLEVIC LG  VF  IL+IR  W    + Q
Sbjct: 135 SFAVDGILLLGSLSITRAFLEVICNLGGTVFTVILLIRLFWAAASFFQ 180

[Close]
BLAST of Cp4.1LG04g07520 vs. NCBI nr
Match: gi|659110111|ref|XP_008455053.1| (PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 3.5e-71
Identity = 146/175 (83.43%), Postives = 161/175 (92.00%), Query Frame = 1 

Query: 27  SHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEE--N 86
           SH  QIS+TLLRA+RRTSNFSQGVD+ VD+RRNWNRS   DFD+IGGE++E++E+EE  +
Sbjct: 31  SHPFQISYTLLRATRRTSNFSQGVDNFVDERRNWNRS---DFDLIGGEEEEEEEEEEDDD 90

Query: 87  EEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKA 146
           EEEDRSLDLLVRFVENVFRK S+RARKAVRSVLPQSIPTKLV FSVNGVLMLAFLW+LKA
Sbjct: 91  EEEDRSLDLLVRFVENVFRKSSRRARKAVRSVLPQSIPTKLVAFSVNGVLMLAFLWVLKA 150

Query: 147 FLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           FLEVICTLGTAVFVSILIIRGVW GILYLQD RSHR ++ DDDQHHAWTGAQPAS
Sbjct: 151 FLEVICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLEQFDDDQHHAWTGAQPAS 202

[Close]
BLAST of Cp4.1LG04g07520 vs. NCBI nr
Match: gi|778724801|ref|XP_004136931.2| (PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-70
Identity = 144/175 (82.29%), Postives = 160/175 (91.43%), Query Frame = 1 

Query: 27  SHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENE- 86
           SH + IS+TLLRA+RRTSNFSQGVD+ VDDRRNWNRS   DFD+IGGE++E++E++E+E 
Sbjct: 31  SHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEE 90

Query: 87  -EEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKA 146
            EEDRSLDLLVRFVEN+FRK S+RARKAVRSVLP SIPTKLV FSVNGVLMLAFLW+LKA
Sbjct: 91  DEEDRSLDLLVRFVENIFRKSSRRARKAVRSVLPPSIPTKLVAFSVNGVLMLAFLWVLKA 150

Query: 147 FLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           FLEVICTLGTAVFVSILIIRGVW GILYLQD RSHR  +LDDDQHHAWTGAQPAS
Sbjct: 151 FLEVICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS 202

[Close]
BLAST of Cp4.1LG04g07520 vs. NCBI nr
Match: gi|568867095|ref|XP_006486880.1| (PREDICTED: uncharacterized protein LOC102621139 [Citrus sinensis])

HSP 1 Score: 217.2 bits (552), Expect = 2.5e-53
Identity = 117/163 (71.78%), Postives = 139/163 (85.28%), Query Frame = 1 

Query: 37  LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVR 96
           LRASRR+SNFSQ  D+ V+D RNWN +I+ +FD     D +DDED+E EEEDRSLDLLV+
Sbjct: 36  LRASRRSSNFSQVNDNFVEDPRNWNHAIAREFD-----DYDDDEDDEAEEEDRSLDLLVK 95

Query: 97  FVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAV 156
           FVENVF+KVS++ARKAVRSVLPQSI   LVGFSVNGVL+LAFLW+LKAFLEV+CTLGT V
Sbjct: 96  FVENVFKKVSRKARKAVRSVLPQSISKNLVGFSVNGVLILAFLWVLKAFLEVVCTLGTVV 155

Query: 157 FVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           FVSIL+IRGVWTG+ YLQ+ R+HR D L DD++ AW GAQPA+
Sbjct: 156 FVSILLIRGVWTGVTYLQESRTHRVDDL-DDENPAWRGAQPAA 192

[Close]
BLAST of Cp4.1LG04g07520 vs. NCBI nr
Match: gi|590687524|ref|XP_007042688.1| (Uncharacterized protein TCM_007264 [Theobroma cacao])

HSP 1 Score: 214.2 bits (544), Expect = 2.1e-52
Identity = 115/174 (66.09%), Postives = 142/174 (81.61%), Query Frame = 1 

Query: 27  SHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIG-GEDDEDDEDEENE 86
           +HS Q    LL ASRR  NF QG D+LVD  RNW RSI+S+FD    G++DED++++E+E
Sbjct: 35  THSFQ----LLLASRRIPNFPQGTDNLVDGPRNWGRSITSEFDDDQEGDEDEDEDEDEDE 94

Query: 87  EEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAF 146
           +EDRSLDLL+RFV+NVFRK+SKRARKAVR+VLP SI TKLVGFSVNGVLMLAFLW+LKAF
Sbjct: 95  DEDRSLDLLIRFVQNVFRKISKRARKAVRAVLPVSISTKLVGFSVNGVLMLAFLWVLKAF 154

Query: 147 LEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           LEV+CTLG+ VFVS+L+IRG+W G+ Y+Q+ R  R + L DDQ  AWTG  PA+
Sbjct: 155 LEVVCTLGSIVFVSVLLIRGIWMGVTYVQESRDQRINELVDDQ-RAWTGTHPAT 203

[Close]
BLAST of Cp4.1LG04g07520 vs. NCBI nr
Match: gi|567860188|ref|XP_006422748.1| (hypothetical protein CICLE_v10029333mg [Citrus clementina])

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-51
Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 1 

Query: 37  LRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVR 96
           LRASRR+SN SQ  D+ V+D RNWN +I+ +FD     D +DDED+E EEEDRSLDLLV+
Sbjct: 36  LRASRRSSNISQVNDNFVEDPRNWNHAIAREFD-----DYDDDEDDEAEEEDRSLDLLVK 95

Query: 97  FVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAV 156
           FVENVF+KVS++ARKAVRSVLPQSI   LVGFSVNGVL+LAFLW+LKAFLEV+CTLGT V
Sbjct: 96  FVENVFKKVSRKARKAVRSVLPQSISKNLVGFSVNGVLILAFLWVLKAFLEVVCTLGTVV 155

Query: 157 FVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 200
           FVSIL+IRGVWTG+ YLQ+ R+HR D L D ++ AW GAQPA+
Sbjct: 156 FVSILLIRGVWTGVTYLQESRTHRVDDL-DAENPAWRGAQPAA 192

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g07520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g07520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2W4_CUCSA2.1e-7082.29Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070780 PE=4 SV=1[more]
A0A061E0E9_THECC1.5e-5266.09Uncharacterized protein OS=Theobroma cacao GN=TCM_007264 PE=4 SV=1[more]
V4RNQ0_9ROSI7.4e-5270.55Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029333mg PE=4 SV=1[more]
D7T3P4_VITVI6.3e-5169.33Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00370 PE=4 SV=... [more]
A0A0K9QRN1_SPIOL1.8e-5062.70Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148810 PE=4 SV=1[more]
BLAST of Cp4.1LG04g07520 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33780.13.1e-4964.60 FUNCTIONS IN: molecular_function unknown[more]
AT1G69935.13.9e-2036.31 short hypocotyl in white light1[more]
BLAST of Cp4.1LG04g07520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110111|ref|XP_008455053.1|3.5e-7183.43PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo][more]
gi|778724801|ref|XP_004136931.2|3.0e-7082.29PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus][more]
gi|568867095|ref|XP_006486880.1|2.5e-5371.78PREDICTED: uncharacterized protein LOC102621139 [Citrus sinensis][more]
gi|590687524|ref|XP_007042688.1|2.1e-5266.09Uncharacterized protein TCM_007264 [Theobroma cacao][more]
gi|567860188|ref|XP_006422748.1|1.1e-5170.55hypothetical protein CICLE_v10029333mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0009787 regulation of abscisic acid-activated signaling pathway
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0003674 molecular_function
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g07520.1Cp4.1LG04g07520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35474FAMILY NOT NAMEDcoord: 32..199
score: 3.9
NoneNo IPR availablePANTHERPTHR35474:SF1SUBFAMILY NOT NAMEDcoord: 32..199
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g07520Cucsa.219030Cucumber (Gy14) v1cgycpeB0602
Cp4.1LG04g07520CmaCh11G016920Cucurbita maxima (Rimu)cmacpeB154
Cp4.1LG04g07520CmaCh19G005400Cucurbita maxima (Rimu)cmacpeB539
Cp4.1LG04g07520CmoCh19G005540Cucurbita moschata (Rifu)cmocpeB494
Cp4.1LG04g07520CmoCh11G014280Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g07520Cla001614Watermelon (97103) v1cpewmB665
Cp4.1LG04g07520Csa7G070780Cucumber (Chinese Long) v2cpecuB695
Cp4.1LG04g07520MELO3C018531Melon (DHL92) v3.5.1cpemeB604
Cp4.1LG04g07520ClCG02G007130Watermelon (Charleston Gray)cpewcgB590
Cp4.1LG04g07520CSPI07G06730Wild cucumber (PI 183967)cpecpiB697
Cp4.1LG04g07520Lsi03G005990Bottle gourd (USVL1VR-Ls)cpelsiB543
Cp4.1LG04g07520MELO3C018531.2Melon (DHL92) v3.6.1cpemedB715
Cp4.1LG04g07520CsaV3_7G007690Cucumber (Chinese Long) v3cpecucB0868
Cp4.1LG04g07520CsGy7G006280Cucumber (Gy14) v2cgybcpeB969
Cp4.1LG04g07520Carg16318Silver-seed gourdcarcpeB0639
Cp4.1LG04g07520Carg23045Silver-seed gourdcarcpeB1033
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g07520Cp4.1LG15g04310Cucurbita pepo (Zucchini)cpecpeB269
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g07520Silver-seed gourdcarcpeB0409
Cp4.1LG04g07520Silver-seed gourdcarcpeB0529
Cp4.1LG04g07520Wax gourdcpewgoB0856
Cp4.1LG04g07520Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG04g07520Cucurbita maxima (Rimu)cmacpeB749
Cp4.1LG04g07520Cucurbita moschata (Rifu)cmocpeB321
Cp4.1LG04g07520Cucurbita moschata (Rifu)cmocpeB703
Cp4.1LG04g07520Bottle gourd (USVL1VR-Ls)cpelsiB548