CmoCh11G014280 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G014280
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptionshort hypocotyl in white light1
LocationCmo_Chr11 : 10055199 .. 10059434 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCATCTGCAAACGGCTGCTGTTCTTCCACAGCGGATCATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTCATTCTCAGCTGCGATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGTCCACCGGATTTCTCTTCCCCTCTATTCGCCTTTGTTGTTTTTGTTCTCAATCTGCTCGATCTCTTCCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGACTTCGACATAATGGGTGGCGAAGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCCATCCCTACTAAACTGGTAGATGTTTTTCTTTTCTTGTTCATAAATAAGATTACTCATTAATTTTTAATCTATGAATTGTGGTTAGTCAATTTTGCATTAGAAATTGATTTTCTCAGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTAACTGCATCGATATTTAGCCCTTTTATTGCGTTTCCTTTAGTATTTCCATATGGATTTGTGTCCTCAGTAATAGATAGTTAGCTGTAAACTTTCATTGCAAAAGAGAAATGCGTGTTCGAAATTCGACTATAATAATGCAGATATTTTAGTTTGGTTGTGGAGAAGGGGGTGAAAGAATTGTTATGACACTTAGTTCTTGTTCAATTGGATATGCATGACAAACGTAGCACCCAAAGAAGAGATTTCTTGTCCTCCGTTGGGAGATGGTAGTTCTGTTAGGGAACTTTGGCTAGAAAGTAAATGGAAAACTTTTTGTGAAGAAGAAGAATTGTCAGTTGGTTTTATACATGGAATTGCTGGTCTTCGGTTCGTTGTCCCCCAAAAAATGAGTTGTAATTGTGGTATTATTTCTATTTTCGTTAATCGAGTCTCTTTGTAACTTCATTAGTATGGCTAATGTCCAGGGCTACCCCCCCCTCCCTCCTAGAGATGTCTTGAGATTGAGTTAACTTTATAAATCTTCTCATATGAACAGTCGGAGTAAACCAATATTGTCGTTGGAAAACTTTTCGAAACCGGACGGTATTCATACTGATTAAGGGTGTCATCTGCTCGGCTCTAGTTAGACGGTGGATATGGTTAAAAATGAACCTAGACGTCATTTGGCCTTGTTTGCTGCATTTATCAGTAGTGAAAAGTACTAGTCCACTGATGTGGATTGCCTATTGAATTGGACATGCTTGTGGATAGTTCGTGCTAAACGTCTCTGATGGCAAGATCTAAACGAGACAAGTCATGCTTATCCATCAGAATCACTGGCCAACAATAATATGATCCATCCGAATCACTGGGCAATAGTAACATTAGATATATGTATGCACTCTTCTGGAGGGTTTATTTACCTGCACACTAACAGTTTTGTTATCGGGATAGGGCAAAAGAATAAACCTAGATGGTGTTTTATTGTGAGATCCCACATCGGTTGAGGAGGAGAGCGAAACATTCTTTATAAGTGGAAACCTCTCCCTAGTGGATGCGTTTTAAAAACCTTGAGGAGAAGCCCGAAAAGGAAAACCCAAAGAAGACAGGATAATATCTGCTTGCGGTGGGCTTGCACCGTAAGTTGTCTACTCAGAAGTAGATCAAAGTGCTGGTGTGTTGATGTAGATTGATTATTGAGTTTGACGGTGGTCCGTGGTTGTAGACAGCATGCATAAAATTTCTGTTATATTGAGATATAGATAGTTGGAGTATGCGACACCATCTGTCTCTCTAGTGGGAATAAGTGAACCTACAGACTTTGCTAAAGGTTTTAATTACCTACACACAGTACTTTTTATTGTTTATGAGAACAGCAAACCTTTCATGGAGGAAAAATGAAGGATTACGAAGGGCCTACAACAAGAAAGGCCCCACAAAAAATAGCCTAACTAAAACAAATGGGGACTTCAATCAAACAAAAGAAGACCAACTGGGTAATTATGAAGACCTTAAAGCCCAAAGGGAATGTGGAATCTAACAAGGGACCGCACCTCTTATTTAGGTCTCTCAATCCCTAAAAATTCTGTTATTTCTTCCTACCCAAAAGCCCCACATATTCACGCAAACCTTGGTTAGCCACACAAAACGCCCCCTATCATGAAAGGGCAGGTGAAGCAAGAGTTCCTTAATCAAAGAGCTACACCCTCCAGGTCGAGTTAAATGAAAATTGAAAGCCTGAAAGAAGCAACTCCAAACTGAGAAAGCTTAGTTGTAGCAGCTCCCTGCAAGGTGGTCAAAATCCTCAACCCGCGCCCGCCTGCAGAGAATACAACACGGAGGCCCTAACAGACCCATCTTAACCTATACACTTATAGCACTATTAGAGGATATGACTAAAGGGAAAACCTAGGGTTGTATTTGACTTTTTTTTTCTTTTCTTTTAATCAATAGTGAGAAGTACAGGCCTGTTGGCATGGATTGACTATTGAGTTTGCTGGTTGTGGTGGTTGTAGACAGTAGTGTAAACTCCTCTTTGGGTTTTCCCTTCCGAGAAGGTTTTAAAATGCGTTCCAAGAGAGAAGTTTCCACACCTTTATAAGGAATGCTTCATTCTTCTCTCCAAATCGATTTGGGATCTCACAATCCACCCCCCTTGGGGGCCTAGTGTCCTCACTGGTACACTGCCCGGTGTTTGGCTTTGATACCATTTGTAACAGCTCAAGCCCACCGCTAGTAGATATTGTCTTCTTTAGGCTTTCCCATCTAACCTTTCCCTCAAGGTTTTAAAATGTATCCACTAGAAAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCTTCTCCAACCGATGTGGGATCTCACAAGTAGGCTTTCAAGAGACAGTCTAAAATGGTTCTAGTATAGAAAGAACTTGAAACTTTCAACGAGCTAAAACTAATCAAGGTCGATAGGAAGTTTCAGAATTTCTTGACAAAGTTTGTTCTACGAAAATATCCATGGAAGAATAGTTCTGTTGAAGTAAGAATACTTTTATTGGTGCATTCTTGCATCCTTGTTGAGAGTTTTTTTTTGCCATCGACTCTAGTGGTGTCATGTGTAGCTGAGGGTTAGATTTCTCAGAACTATATACTTTTAGCTCCTTTCTTTGTGCTTGGCCTTTATTTCTGCACGTCGTTGCTCTCTTCTAGTTTCAATTTTCTCAACTATGCCACCTTCAATAGTGAAAGAAAAAAGAAAGCAGAACACTTATTTCCTCTGCTGCTTTGTGAAATCTTAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTCGATGACGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGAATTCCTCTCACTTAACTGCTTATACGTTATAAGTGACAAGGTTAGTGATGACACATAAAAAGAAAAAAAAAGGAAGATAAAGATTAGAATAAAATAGGCTTGGTTTCATAGCCTTCATACTTATTTCATGGTCAGTAAATTCTTCGTTCTCTAAACTTCGTATAAAAAATTGTTTTAGTCCTTGCCAAAAGTGTTCATAAATAGTTAAACATAAGTTTACGGGTGGGTTTCGAAACGAAATCGGATTTTTGGAAATGCTTTACGAAAATAGCTGCAAGGACTATAACAACTTTCTATGCAAAGTTTAGGGACTAAAATAGTAAAACGTTTCGAAGTTTAAAGATCAAGAATAAAATATGCATGAAAGTTCAAGTATCATAGTCGAGTTTAAACGAGTATAGCTGGAATTCTGTTCTCTATGATTCAATATAATTTTGTCCTTGTAGCTTTCTGTAAACTATGAAAGAATTTGTTGTTTTTCCTCAAATCTTTAGATCATGAGTAGAAACAGCAAGGGAGGGTAGCTTCTGATGTAATATTATGAGGCAGATTTGGTGTATTATTTGGTTGTAAGGTTTTTTTGCGCAATGAAATTGGATTCGTATAAAAAAACGAAATGAAATGAAAGGAATGGTTTTGTCGTGGTAAG

mRNA sequence

AGCATCTGCAAACGGCTGCTGTTCTTCCACAGCGGATCATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTCATTCTCAGCTGCGATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGACTTCGACATAATGGGTGGCGAAGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCCATCCCTACTAAACTGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTCGATGACGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGAATTCCTCTCACTTAACTGCTTATACGTTATAAGTGACAAGGTTAGTGATGACACATAAAAAGAAAAAAAAAGGAAGATAAAGATTAGAATAAAATAGGCTTGGTTTCATAGCCTTCATACTTATTTCATGGTCAGTAAATTCTTCGTTCTCTAAACTTCGTATAAAAAATTGTTTTAGTCCTTGCCAAAAGTGTTCATAAATAGTTAAACATAAGTTTACGGGTGGGTTTCGAAACGAAATCGGATTTTTGGAAATGCTTTACGAAAATAGCTGCAAGGACTATAACAACTTTCTATGCAAAGTTTAGGGACTAAAATAGTAAAACGTTTCGAAGTTTAAAGATCAAGAATAAAATATGCATGAAAGTTCAAGTATCATAGTCGAGTTTAAACGAGTATAGCTGGAATTCTGTTCTCTATGATTCAATATAATTTTGTCCTTGTAGCTTTCTGTAAACTATGAAAGAATTTGTTGTTTTTCCTCAAATCTTTAGATCATGAGTAGAAACAGCAAGGGAGGGTAGCTTCTGATGTAATATTATGAGGCAGATTTGGTGTATTATTTGGTTGTAAGGTTTTTTTGCGCAATGAAATTGGATTCGTATAAAAAAACGAAATGAAATGAAAGGAATGGTTTTGTCGTGGTAAG

Coding sequence (CDS)

ATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTCATTCTCAGCTGCGATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGACTTCGACATAATGGGTGGCGAAGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCCATCCCTACTAAACTGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTCGATGACGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGA
Homology
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BLAST of CmoCh11G014280 vs. TrEMBL
Match: A0A0A0K2W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070780 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.3e-80
Identity = 165/205 (80.49%), Postives = 184/205 (89.76%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPHSQLRLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDD 60
           MSLPA LSPPSL+SIP SQL   TS TS+LSH + IS+TLLRA+RRTSNFSQGVD+ VDD
Sbjct: 1   MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDD 60

Query: 61  RRNWNRSISSDFDIMGGEDDEDDEDEENE--EEDRSLDLLVRFVENVFRKVSKRARKAVR 120
           RRNWNRS   DFD++GGE++E++E++E+E  EEDRSLDLLVRFVEN+FRK S+RARKAVR
Sbjct: 61  RRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFVENIFRKSSRRARKAVR 120

Query: 121 SVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 180
           SVLP SIPTKLV FSVNGVLMLAFLW+LKAFLEVICTLGTAVFVSILIIRGVW GILYLQ
Sbjct: 121 SVLPPSIPTKLVAFSVNGVLMLAFLWVLKAFLEVICTLGTAVFVSILIIRGVWIGILYLQ 180

Query: 181 DIRSHRFDRLDDDQHHAWTGAQPAS 204
           D RSHR  +LDDDQHHAWTGAQPAS
Sbjct: 181 DTRSHRLGQLDDDQHHAWTGAQPAS 202

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BLAST of CmoCh11G014280 vs. TrEMBL
Match: A0A061E0E9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007264 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.0e-52
Identity = 125/211 (59.24%), Postives = 154/211 (72.99%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPHSQLRLPTSR-------TSILSHSLQISHTLLRASRRTSNFSQG 60
           MS    LSP  L   P+   R P S          + +HS Q    LL ASRR  NF QG
Sbjct: 1   MSSTVTLSPTFLAGFPY---RKPPSHFFSNPKILLLKTHSFQ----LLLASRRIPNFPQG 60

Query: 61  VDHLVDDRRNWNRSISSDFDI-MGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKR 120
            D+LVD  RNW RSI+S+FD    G++DED++++E+E+EDRSLDLL+RFV+NVFRK+SKR
Sbjct: 61  TDNLVDGPRNWGRSITSEFDDDQEGDEDEDEDEDEDEDEDRSLDLLIRFVQNVFRKISKR 120

Query: 121 ARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWT 180
           ARKAVR+VLP SI TKLVGFSVNGVLMLAFLW+LKAFLEV+CTLG+ VFVS+L+IRG+W 
Sbjct: 121 ARKAVRAVLPVSISTKLVGFSVNGVLMLAFLWVLKAFLEVVCTLGSIVFVSVLLIRGIWM 180

Query: 181 GILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           G+ Y+Q+ R  R + L DDQ  AWTG  PA+
Sbjct: 181 GVTYVQESRDQRINELVDDQ-RAWTGTHPAT 203

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BLAST of CmoCh11G014280 vs. TrEMBL
Match: V4RNQ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029333mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.2e-51
Identity = 121/196 (61.73%), Postives = 149/196 (76.02%), Query Frame = 1 

Query: 13  YSIPHSQLRLPTSRTSILSHSLQISHTL-----LRASRRTSNFSQGVDHLVDDRRNWNRS 72
           +++  S L L  S+  +  H+    H       LRASRR+SN SQ  D+ V+D RNWN +
Sbjct: 3   FAVTLSPLFLSPSKPKLHFHNFPKFHPFQKIYPLRASRRSSNISQVNDNFVEDPRNWNHA 62

Query: 73  ISSDFDIMGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPT 132
           I+ +FD     D +DDED+E EEEDRSLDLLV+FVENVF+KVS++ARKAVRSVLPQSI  
Sbjct: 63  IAREFD-----DYDDDEDDEAEEEDRSLDLLVKFVENVFKKVSRKARKAVRSVLPQSISK 122

Query: 133 KLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDR 192
            LVGFSVNGVL+LAFLW+LKAFLEV+CTLGT VFVSIL+IRGVWTG+ YLQ+ R+HR D 
Sbjct: 123 NLVGFSVNGVLILAFLWVLKAFLEVVCTLGTVVFVSILLIRGVWTGVTYLQESRTHRVDD 182

Query: 193 LDDDQHHAWTGAQPAS 204
           L D ++ AW GAQPA+
Sbjct: 183 L-DAENPAWRGAQPAA 192

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BLAST of CmoCh11G014280 vs. TrEMBL
Match: M5VKP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011398mg PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-50
Identity = 125/213 (58.69%), Postives = 156/213 (73.24%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPHSQ-----LRLPTSRTSILS-HSLQISHTLLRASRRTSNFSQG- 60
           M   A LS P+L   P +Q     L LP      L   S  +     +ASRRT N+ QG 
Sbjct: 1   MPFSATLSRPTLSYFPQTQQHQQQLHLPHFLNPYLKPKSFSLQFQCAQASRRTPNYPQGG 60

Query: 61  VDHLVDDRRNWNRSISSDFDIMGG--EDDEDDED-EENEEEDRSLDLLVRFVENVFRKVS 120
            D+LVDD RNW+RSI+S+ D      +DDEDDED +++EEEDRSLDLLVRFV+N+F+KVS
Sbjct: 61  ADNLVDDPRNWSRSINSEVDRHYNFEDDDEDDEDDDDDEEEDRSLDLLVRFVQNMFKKVS 120

Query: 121 KRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGV 180
           +RAR+AVRSVLP SIPTKLVGFSVNGVLMLAFLW+LKAFLEV+CTLG+ VFVSIL+IRG+
Sbjct: 121 RRARRAVRSVLPVSIPTKLVGFSVNGVLMLAFLWVLKAFLEVVCTLGSLVFVSILLIRGI 180

Query: 181 WTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           WTG+ Y+Q+ R+ +  R  +D+   WTG QPA+
Sbjct: 181 WTGVTYVQENRTQKL-RNFEDESRPWTGTQPAT 212

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BLAST of CmoCh11G014280 vs. TrEMBL
Match: D7T3P4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00370 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.2e-50
Identity = 122/200 (61.00%), Postives = 143/200 (71.50%), Query Frame = 1 

Query: 4   PAALSPPSLYSIPHSQLRLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDDRRN 63
           P  LSP    + PH  L       S L          LR+SRR S+FSQ  DHLVDD RN
Sbjct: 14  PPPLSPELHTARPHLNLIFRFHSFSNLPR--------LRSSRRISHFSQEGDHLVDDPRN 73

Query: 64  WNRSISSDFDIMGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQ 123
           W R+ S      G ++DEDDED+E EEEDRSLDLLVRFV+NVF+K+SKR RKAVRSVLP 
Sbjct: 74  WTRNRSVVAGEYGDDEDEDDEDDE-EEEDRSLDLLVRFVQNVFKKISKRTRKAVRSVLPV 133

Query: 124 SIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSH 183
            I TKLVGFSV+GVLML FLW+LKAFLEVICTLG+ VFVSIL+IRG+WTG+ Y+Q+ R+H
Sbjct: 134 PISTKLVGFSVDGVLMLTFLWVLKAFLEVICTLGSVVFVSILVIRGIWTGVSYVQENRNH 193

Query: 184 RFDRLDDDQHHAWTGAQPAS 204
             + L DD H AWTG QP +
Sbjct: 194 TGNELGDD-HRAWTGTQPTT 203

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BLAST of CmoCh11G014280 vs. TAIR10
Match: AT4G33780.1 (AT4G33780.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 189.5 bits (480), Expect = 2.0e-48
Identity = 114/198 (57.58%), Postives = 142/198 (71.72%), Query Frame = 1 

Query: 8   SPPSLYSIPHSQLR--LPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWN 67
           SP S  ++  S L   + T +T I + + +IS     ASRR+ +F  G D   DD R+WN
Sbjct: 9   SPSSSVALLRSPLSFFIFTPKTLIFTRT-RISGFPYLASRRSRDFINGRDDFADDTRSWN 68

Query: 68  RSISSDFDIMGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSI 127
           R I  ++      D E+D+D+ +EEEDRSLDLL+RFVENVFRK+SKRARKAVRS+LP SI
Sbjct: 69  RKIKPEYGFDEDYDGEEDDDD-HEEEDRSLDLLLRFVENVFRKISKRARKAVRSILPVSI 128

Query: 128 PTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRF 187
            TKLVGFSVNGVL+LAFLWILKAFLEV CTLGT VF SIL+IRG+W G+ Y+Q+ R++R 
Sbjct: 129 STKLVGFSVNGVLILAFLWILKAFLEVACTLGTIVFTSILLIRGLWAGVAYMQESRNNRI 188

Query: 188 DRLDDDQHHAWTGAQPAS 204
           + L DD   AW G QP S
Sbjct: 189 NELADDP-RAWNGMQPVS 203

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BLAST of CmoCh11G014280 vs. TAIR10
Match: AT1G69935.1 (AT1G69935.1 short hypocotyl in white light1)

HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19
Identity = 66/180 (36.67%), Postives = 101/180 (56.11%), Query Frame = 1 

Query: 22  LPTSRTSILSHSLQISHTLLRASRR---TSNFSQGVDHLVDDRRNWNRSISS-------- 81
           +  + T++ S S   S TL+ AS R    + FS     L    R  NRS++S        
Sbjct: 1   MAAATTTLSSSSSSPSLTLINASHRFVSVTPFSSNSIFLRRRFRRLNRSLASSSSHSRRR 60

Query: 82  ------------DFDIMGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVR 141
                       ++D++  +D   D+D+E +E + S+DLL+RF+ ++F+KVSKR +KA R
Sbjct: 61  YESDDRFFGGGDNYDVVPDDDGFSDDDDEEDERESSVDLLIRFLRSMFKKVSKRTKKASR 120

Query: 142 SVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 179
            +LP ++  +LV F+V+G+L+L  L I +AFLEVIC LG  VF  IL+IR  W    + Q
Sbjct: 121 RILPAAMSPRLVSFAVDGILLLGSLSITRAFLEVICNLGGTVFTVILLIRLFWAAASFFQ 180

[Close]
BLAST of CmoCh11G014280 vs. NCBI nr
Match: gi|659110111|ref|XP_008455053.1| (PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo])

HSP 1 Score: 313.5 bits (802), Expect = 2.6e-82
Identity = 168/205 (81.95%), Postives = 186/205 (90.73%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPHSQLRLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDD 60
           MSLPA LSPPSL+SIP SQ   PTSRTS+LSH  QIS+TLLRA+RRTSNFSQGVD+ VD+
Sbjct: 1   MSLPAVLSPPSLFSIPQSQPPFPTSRTSLLSHPFQISYTLLRATRRTSNFSQGVDNFVDE 60

Query: 61  RRNWNRSISSDFDIMGGEDDEDDEDEE--NEEEDRSLDLLVRFVENVFRKVSKRARKAVR 120
           RRNWNRS   DFD++GGE++E++E+EE  +EEEDRSLDLLVRFVENVFRK S+RARKAVR
Sbjct: 61  RRNWNRS---DFDLIGGEEEEEEEEEEDDDEEEDRSLDLLVRFVENVFRKSSRRARKAVR 120

Query: 121 SVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 180
           SVLPQSIPTKLV FSVNGVLMLAFLW+LKAFLEVICTLGTAVFVSILIIRGVW GILYLQ
Sbjct: 121 SVLPQSIPTKLVAFSVNGVLMLAFLWVLKAFLEVICTLGTAVFVSILIIRGVWIGILYLQ 180

Query: 181 DIRSHRFDRLDDDQHHAWTGAQPAS 204
           D RSHR ++ DDDQHHAWTGAQPAS
Sbjct: 181 DTRSHRLEQFDDDQHHAWTGAQPAS 202

[Close]
BLAST of CmoCh11G014280 vs. NCBI nr
Match: gi|778724801|ref|XP_004136931.2| (PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 1.9e-80
Identity = 165/205 (80.49%), Postives = 184/205 (89.76%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPHSQLRLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDD 60
           MSLPA LSPPSL+SIP SQL   TS TS+LSH + IS+TLLRA+RRTSNFSQGVD+ VDD
Sbjct: 1   MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDD 60

Query: 61  RRNWNRSISSDFDIMGGEDDEDDEDEENE--EEDRSLDLLVRFVENVFRKVSKRARKAVR 120
           RRNWNRS   DFD++GGE++E++E++E+E  EEDRSLDLLVRFVEN+FRK S+RARKAVR
Sbjct: 61  RRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFVENIFRKSSRRARKAVR 120

Query: 121 SVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQ 180
           SVLP SIPTKLV FSVNGVLMLAFLW+LKAFLEVICTLGTAVFVSILIIRGVW GILYLQ
Sbjct: 121 SVLPPSIPTKLVAFSVNGVLMLAFLWVLKAFLEVICTLGTAVFVSILIIRGVWIGILYLQ 180

Query: 181 DIRSHRFDRLDDDQHHAWTGAQPAS 204
           D RSHR  +LDDDQHHAWTGAQPAS
Sbjct: 181 DTRSHRLGQLDDDQHHAWTGAQPAS 202

[Close]
BLAST of CmoCh11G014280 vs. NCBI nr
Match: gi|568867095|ref|XP_006486880.1| (PREDICTED: uncharacterized protein LOC102621139 [Citrus sinensis])

HSP 1 Score: 215.7 bits (548), Expect = 7.5e-53
Identity = 123/196 (62.76%), Postives = 151/196 (77.04%), Query Frame = 1 

Query: 13  YSIPHSQLRLPTSRTSILSHSLQISHTL-----LRASRRTSNFSQGVDHLVDDRRNWNRS 72
           +++  S L L  S+  +  H+    H       LRASRR+SNFSQ  D+ V+D RNWN +
Sbjct: 3   FAVTLSPLFLSPSKPQLHFHNFPKFHPFQKIYPLRASRRSSNFSQVNDNFVEDPRNWNHA 62

Query: 73  ISSDFDIMGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPT 132
           I+ +FD     D +DDED+E EEEDRSLDLLV+FVENVF+KVS++ARKAVRSVLPQSI  
Sbjct: 63  IAREFD-----DYDDDEDDEAEEEDRSLDLLVKFVENVFKKVSRKARKAVRSVLPQSISK 122

Query: 133 KLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDR 192
            LVGFSVNGVL+LAFLW+LKAFLEV+CTLGT VFVSIL+IRGVWTG+ YLQ+ R+HR D 
Sbjct: 123 NLVGFSVNGVLILAFLWVLKAFLEVVCTLGTVVFVSILLIRGVWTGVTYLQESRTHRVDD 182

Query: 193 LDDDQHHAWTGAQPAS 204
           L DD++ AW GAQPA+
Sbjct: 183 L-DDENPAWRGAQPAA 192

[Close]
BLAST of CmoCh11G014280 vs. NCBI nr
Match: gi|590687524|ref|XP_007042688.1| (Uncharacterized protein TCM_007264 [Theobroma cacao])

HSP 1 Score: 213.8 bits (543), Expect = 2.8e-52
Identity = 125/211 (59.24%), Postives = 154/211 (72.99%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPHSQLRLPTSR-------TSILSHSLQISHTLLRASRRTSNFSQG 60
           MS    LSP  L   P+   R P S          + +HS Q    LL ASRR  NF QG
Sbjct: 1   MSSTVTLSPTFLAGFPY---RKPPSHFFSNPKILLLKTHSFQ----LLLASRRIPNFPQG 60

Query: 61  VDHLVDDRRNWNRSISSDFDI-MGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKR 120
            D+LVD  RNW RSI+S+FD    G++DED++++E+E+EDRSLDLL+RFV+NVFRK+SKR
Sbjct: 61  TDNLVDGPRNWGRSITSEFDDDQEGDEDEDEDEDEDEDEDRSLDLLIRFVQNVFRKISKR 120

Query: 121 ARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWT 180
           ARKAVR+VLP SI TKLVGFSVNGVLMLAFLW+LKAFLEV+CTLG+ VFVS+L+IRG+W 
Sbjct: 121 ARKAVRAVLPVSISTKLVGFSVNGVLMLAFLWVLKAFLEVVCTLGSIVFVSVLLIRGIWM 180

Query: 181 GILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           G+ Y+Q+ R  R + L DDQ  AWTG  PA+
Sbjct: 181 GVTYVQESRDQRINELVDDQ-RAWTGTHPAT 203

[Close]
BLAST of CmoCh11G014280 vs. NCBI nr
Match: gi|645261355|ref|XP_008236254.1| (PREDICTED: uncharacterized protein LOC103335039 [Prunus mume])

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-51
Identity = 126/213 (59.15%), Postives = 158/213 (74.18%), Query Frame = 1 

Query: 1   MSLPAALSPPSLYSIPHSQ-----LRLPTSRTSILS-HSLQISHTLLRASRRTSNFSQG- 60
           M   A LSPP+L   P +Q     L LP +    L   S  +     +ASRRT N+ QG 
Sbjct: 1   MPFSATLSPPTLSYFPQTQQYQQQLHLPHTLNPYLKPKSFSLQFQCAQASRRTPNYPQGG 60

Query: 61  VDHLVDDRRNWNRSISSDFDIMGG--EDDEDDED-EENEEEDRSLDLLVRFVENVFRKVS 120
            D+LVDD RNW+RSI+S+ D      +DDEDDED +++EEEDRSLDLLVRFV+N+F+KVS
Sbjct: 61  ADNLVDDPRNWSRSINSEVDRHYNFEDDDEDDEDDDDDEEEDRSLDLLVRFVQNMFKKVS 120

Query: 121 KRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGV 180
           +RAR+AVRSVLP SIPTKLVGFSVNGVLMLAFLW+LKAFLEV+CTLG+ VFVSIL+IRG+
Sbjct: 121 RRARRAVRSVLPVSIPTKLVGFSVNGVLMLAFLWVLKAFLEVVCTLGSLVFVSILLIRGI 180

Query: 181 WTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS 204
           WTG+ Y+Q+ R+ +  R  +D+   WTG QPA+
Sbjct: 181 WTGVTYVQENRNQKL-RNFEDESRPWTGTQPAT 212

The following BLAST results are available for this feature:
BLAST of CmoCh11G014280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh11G014280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2W4_CUCSA1.3e-8080.49Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070780 PE=4 SV=1[more]
A0A061E0E9_THECC2.0e-5259.24Uncharacterized protein OS=Theobroma cacao GN=TCM_007264 PE=4 SV=1[more]
V4RNQ0_9ROSI2.2e-5161.73Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029333mg PE=4 SV=1[more]
M5VKP6_PRUPE4.1e-5058.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011398mg PE=4 SV=1[more]
D7T3P4_VITVI9.2e-5061.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00370 PE=4 SV=... [more]
BLAST of CmoCh11G014280 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33780.12.0e-4857.58 FUNCTIONS IN: molecular_function unknown[more]
AT1G69935.12.6e-1936.67 short hypocotyl in white light1[more]
BLAST of CmoCh11G014280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110111|ref|XP_008455053.1|2.6e-8281.95PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo][more]
gi|778724801|ref|XP_004136931.2|1.9e-8080.49PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus][more]
gi|568867095|ref|XP_006486880.1|7.5e-5362.76PREDICTED: uncharacterized protein LOC102621139 [Citrus sinensis][more]
gi|590687524|ref|XP_007042688.1|2.8e-5259.24Uncharacterized protein TCM_007264 [Theobroma cacao][more]
gi|645261355|ref|XP_008236254.1|2.4e-5159.15PREDICTED: uncharacterized protein LOC103335039 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0009787 regulation of abscisic acid-activated signaling pathway
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G014280.1CmoCh11G014280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35474FAMILY NOT NAMEDcoord: 8..203
score: 3.4
NoneNo IPR availablePANTHERPTHR35474:SF1SUBFAMILY NOT NAMEDcoord: 8..203
score: 3.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G014280Cucsa.219030Cucumber (Gy14) v1cgycmoB0624
CmoCh11G014280CmaCh11G016920Cucurbita maxima (Rimu)cmacmoB117
CmoCh11G014280CmaCh19G005400Cucurbita maxima (Rimu)cmacmoB494
CmoCh11G014280Cla001614Watermelon (97103) v1cmowmB109
CmoCh11G014280Csa7G070780Cucumber (Chinese Long) v2cmocuB137
CmoCh11G014280MELO3C018531Melon (DHL92) v3.5.1cmomeB085
CmoCh11G014280ClCG02G007130Watermelon (Charleston Gray)cmowcgB088
CmoCh11G014280CSPI07G06730Wild cucumber (PI 183967)cmocpiB136
CmoCh11G014280Lsi03G005990Bottle gourd (USVL1VR-Ls)cmolsiB103
CmoCh11G014280Cp4.1LG15g04310Cucurbita pepo (Zucchini)cmocpeB095
CmoCh11G014280Cp4.1LG04g07520Cucurbita pepo (Zucchini)cmocpeB126
CmoCh11G014280MELO3C018531.2Melon (DHL92) v3.6.1cmomedB091
CmoCh11G014280CsaV3_7G007690Cucumber (Chinese Long) v3cmocucB0160
CmoCh11G014280Cla97C02G033970Watermelon (97103) v2cmowmbB088
CmoCh11G014280CsGy7G006280Cucumber (Gy14) v2cgybcmoB881
CmoCh11G014280Carg23045Silver-seed gourdcarcmoB0997
CmoCh11G014280Carg16318Silver-seed gourdcarcmoB0612
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh11G014280CmoCh19G005540Cucurbita moschata (Rifu)cmocmoB110
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G014280Cucurbita pepo (Zucchini)cmocpeB092
CmoCh11G014280Cucurbita pepo (Zucchini)cmocpeB114
CmoCh11G014280Bottle gourd (USVL1VR-Ls)cmolsiB108
CmoCh11G014280Silver-seed gourdcarcmoB0401
CmoCh11G014280Silver-seed gourdcarcmoB0508
CmoCh11G014280Wax gourdcmowgoB0120
CmoCh11G014280Cucurbita moschata (Rifu)cmocmoB096
CmoCh11G014280Cucurbita moschata (Rifu)cmocmoB125
CmoCh11G014280Cucurbita maxima (Rimu)cmacmoB318
CmoCh11G014280Cucurbita maxima (Rimu)cmacmoB678