CmaCh11G016920.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAATCCTCAACAACTGTCAACCATCGTTTTTTGCTGAACAAAAAACGAAAGCATCTGCAAACGGCTGCTGTTCTTCCACAGCTGATCATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTTATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGTCCACCGGATTTCTCTTCCCGTCTATTCACCTTTGTTCCTGTGTTTTTGTTCTCAATCTGCTCGATCTCTTCCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGATTTCGACATAATCGGTGGCGAGGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCTATCCCTACTAAACTGGTAGATGTTTTTTTTTTTCTTGTTCATAAATAAGATTACTCATTAAATTTTTATCTACGAATTGTGGTTAGTCAATTTTGCATTAGAAGTTGATTTTCTCAGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTAACTGCATCGATATTTAGCCCTTTTATTGCGTTTCCTTTAGTATTTCCATATGGATTTGTGTCCTCAGTAATAGATAGTTAGCTGTAAACTTTCATTGCAAAAGAGAAATGCGTGTTTGAAATTCGACTATAATAATACAGATATTTTAGTTTGGTTATGGAGAAGGGGGTGAAAGAATTGTTATGACACTTGTTCTTGTTCAATTGGATATGCATGGAAAACGTAGCACCCAAAGAAGAGATTTCTTGTCCTCCGTTGGGAGATTGTATTTCTGTTAGGGAACTTTGGCCAGAAAGTAAATGGAAAACTTTTTGTAAAGAAGAAGAATTGTCAGTTGGTTTTATACATGGAATTGCTGGTCTTCGGTTCGTTGTCCCCCAAAAAATTAGTTGTAATTGTGGTATTTGTTCTATTTTCGTTAAATCGAGTCTCTTTGTAACTTCTTCAGTATGGCTAATGTCCAGGGCTACCCCCCCTCCTAGAGATGTCTTGAGATTGAATTCAACTTTATAAATCTTCTCATATGAACAGTCGGAGTAAACCAATATTGTCGTTGGAAACTTTTCGAAACCAGTGAGTATCTCTTAAATTGACGGTATTCATACTGATTAAGGGTGCCATCTGCTCGGCTCTAGTTAGACGCTGGATATGGTTAAAAATGAACCTAAACGTCATTTGGCCTTGTTCGCTGCATTCATCAGAAGTAGTGAAAAGTACTAGTCCAATGATGTGGATTGCCTATTGAATTTGCTTGTGCTTGTGGATAGTTCGTGCTAAACTTCACTGATGGCAAGATCTAAACGAGACAAGTCATTCTTATCCATCAGAATCACTGGCCAACAATAATATGATCCATCCGAATCACTGGGCAATAGTAACATTAGATATATGTATGCACCCTTCTGGAGGGTTTATTTACCTACACACTACAGTTTTGTTATTGGGATAGGGCAAAAGAATAAATCTAGATGGTATTTTATTATGAGATCTCACATTGGTTGGGGAGGAGAATGAAATATTCTTTAGAATGTGGAAAGCTCTACCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGAGGTAGGTTTAGGCCATTACAAATGGTATCAGAGCCAGACACAGGGCGAGTGCCAGCGAGGAGGTTGAGACCCGAAGGGGTGGACACGAGGCGGTGTGCCAACAAGTACGCTGGGCCCTAAGGGGGTGGATTGGGGTGTTCCACATCGAATGGAGAAGGGAACGAATGTCAGCAAGGATGCTGGGCCCAAAGGGGGGTAGATTGTGAGATCCCACATCAGTTGGAGAGGAGTACAAAACATTCTTTATAAGAGTGTGAAACCTTCTTCAAAACATTCTTGAAGGAAAGCCTGAAAAAGAAAACCTAAAAAGGACAATATCTGCTAGCAGTGAGCTTGGGCCGTTATGATATTTGACTTTGTTTGTTGTCTACTCAGAAATAGATCAAAGTGCTGGTGTGTTGATGTAGATTGATTATTGAGTTTGATGGTGGTCCGTGGTTGTAGACAGCATGCATAAAATTTCTGTTATATTGAGATATAGATAGTTGGAGTATGCGACACCATCTGTCTCTCTAGTGGGAATAAGTGAACCTACAGACTTTGCTAGAGGTTTTAATTATCTACACACATAGTACTTTTTATTGTTTATGAGAAAAGCAAACCTTTCATGGAGGAAAAATGAAGGATTACGAAGGGCCTACAACAAGAAAGGCCCCACAAAAAATAGGCTTACTAAAACAAATGGGGACTTCAATCAAACAAAAGAAGACCAACAGGGTAATTATGAAGGCCTTAAAGCCCAAAGGGAGATGTGGAATCTAACAAGGGACCACACCTCCTATTTAGGTCTCTCAATCCCTAAAAATTCTGTTATTTCTTCCTACCCAAAAGCCTCACAAAATCACGAAAACCTTGGCTAGCCACAGAAAACGCCCCCCATCATGAAAGTGCAGGTGAAGCAAGAGTTCTTTAATCAAAGAGCTACACCCTCCAGGTCGAGTTAAATGAAAATTGAAAGCCTGGAAGAAGCAACTCCAAACTGAGAATGCTTAGTCATAGCATCTCCCTGCAGGTGGTCAAGATCCCCAACCTGCCCGCCTACAGAGAATACAACACGGAGGCCCTAACAGACCCATCTATACCTATACACTTATAGCACTATTAGAGGATATGACTATAGGGACAACCTAGGGTTGTATTTAACTTTTTTTTTCTTTTTTTTAATCAATAGTGAGAAGTACAGGCCTGTTGGCGTGGATTGACTATTGAGTTTGCTGGTTGTGGTGGTTGTAGACAATAGTGTAATAGACCAAGCCCACTACTAGCAGATATTGTCCTCTTTTGGTTTTTCCTTCCGAGAAGGTTTTAAAATGCATTCCAAGGGAGAAGTTTCCACACCTTTATAAGGAATGCTTCATTCTTCTCTCCAATCGATTTGGGATCTCACAATCCACCCCCCTTGGGGGCCTAGTGTCCTCACTGGTACACCGCCCGGTGTTTGGCTTTGATACCATTTGTAACAGCTCAAGTCCACCGGTAGCAGATATTTTCTTCTTTAGGCTTTCCCGTCTAAGCTTTCCCTCAAGGTTTTAAAAGCGTCCACTAGGGAGAGGTTTCTACACCTTTATAAAGAATGCTTCGTTCTCTTCTCCAACCGATGTGGGATCTCACAAGTAGGCTTTCAGGAGACGGTCTAAAATGGTTCTAGTATAGAAAGAACTGGAAACTTTCAACGAGCTAAAACTAATAAAGGTCGATAGGAAGTTTCAGAATTTCTTGACAAAGTTCGTTCTCCGAAGATATCCATGGAAGAATAGTTTTGTTGATGTAAGAATACTTTTATGGGTGCATTCTTGCATCCTTATTGAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCATCGACTCTAGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCATCGACTCTAGTGGTGTCATGTGTAGCTGAGGGTTAGATTTCTCAGAACTATATACTTTTATCTCCTTTCTTTGTGCTTGGCCTTTATTTCTGCACGTCTTTGCTCTCTTCTAGTTTCAATTTTCTCAATCATGCCACCTTCAATAGTGAAATAAAAAAGAAAAAAGAACACTTATTTCCCCTGCTGCTTTGTGAAATCTTAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGATGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGAATTCCTCTCACTTAACTACTTATACGTTATAAGTGACAAGGTTAGTGATGACACATTAAAAAGAAAAAAGGAAGATAATTAGAATAAAATAGGCTTGGTTGCATAGCCTTCATACTTATTTCATGGTCAGTAAATTCTTCTTTCTCTAAACTTCGTATAAAATTGTTTTAGTCCTTGCCAAAAGTTTTCATTAGTAGTTAAAGGGGGTGGGTTTCGAAACGAAATCGGATTTTTGGAAATGCCTTACGAAAATAGCTGCAAGGACTACAACAACTTTCTATGCAAAGTTTAGGGACTAAAATAGTAAAACATTTCGAAGTTTAAAGATCAAAATAAAATATGCATGAAAGTTTGAATATCATAGTCGAGTTTAAACAGCTGGAATTCTGTTCTATATGATTCAATATAATGTTGTCCTTGTAGCTTTCTGTAAACTATGAAAGAATTTGTTCTTTTTCCTCAAATATTTAGATCACGAGTAGAAACAGCAAGGGAGGGTAGCTTCTGATGTAATATTATGGGGCAGATTTGGTGTATTATTTGGTTGTAATGTTTTTTTTTTTTTTGTGCAATGAAATTGGATTCGTATAAAAAACGAAATGAAATGAAAAGAATGGCTTTGTCGTGGTACGGTAAGGTTCCGAAGTCCCAC ATAATCCTCAACAACTGTCAACCATCGTTTTTTGCTGAACAAAAAACGAAAGCATCTGCAAACGGCTGCTGTTCTTCCACAGCTGATCATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTTATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGATTTCGACATAATCGGTGGCGAGGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCTATCCCTACTAAACTGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGATGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGAATTCCTCTCACTTAACTACTTATACGTTATAAGTGACAAGGTTAGTGATGACACATTAAAAAGAAAAAAGGAAGATAATTAGAATAAAATAGGCTTGGTTGCATAGCCTTCATACTTATTTCATGGTCAGTAAATTCTTCTTTCTCTAAACTTCGTATAAAATTGTTTTAGTCCTTGCCAAAAGTTTTCATTAGTAGTTAAAGGGGGTGGGTTTCGAAACGAAATCGGATTTTTGGAAATGCCTTACGAAAATAGCTGCAAGGACTACAACAACTTTCTATGCAAAGTTTAGGGACTAAAATAGTAAAACATTTCGAAGTTTAAAGATCAAAATAAAATATGCATGAAAGTTTGAATATCATAGTCGAGTTTAAACAGCTGGAATTCTGTTCTATATGATTCAATATAATGTTGTCCTTGTAGCTTTCTGTAAACTATGAAAGAATTTGTTCTTTTTCCTCAAATATTTAGATCACGAGTAGAAACAGCAAGGGAGGGTAGCTTCTGATGTAATATTATGGGGCAGATTTGGTGTATTATTTGGTTGTAATGTTTTTTTTTTTTTTGTGCAATGAAATTGGATTCGTATAAAAAACGAAATGAAATGAAAAGAATGGCTTTGTCGTGGTACGGTAAGGTTCCGAAGTCCCAC ATGTCCTTACCTGCCGCTCTTTCACCGCCGTCCCTCTATTCCATTCCTTATTCTCAGCCGCCATTACCAACCTCTCGGACCTCGATTCTCTCCCATTCCTTGCAAATTTCTCACACCCTCCTCCGGGCTTCCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATCATTTGGTGGACGATCGGCGCAATTGGAACCGCTCGATTAGCTCCGATTTCGACATAATCGGTGGCGAGGACGACGAGGACGACGAGGATGAGGAAAATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTCCGGTTTGTTGAGAATGTTTTCAGGAAGGTCTCGAAGCGAGCCAGGAAGGCTGTGAGATCGGTTCTTCCCCAATCTATCCCTACTAAACTGGTGGGATTTTCTGTCAATGGGGTACTAATGCTAGCGTTTTTGTGGATTTTGAAGGCATTTCTTGAGGTGATATGCACCCTTGGAACTGCAGTGTTTGTGAGCATACTTATCATTCGTGGAGTGTGGACTGGCATCTTATATCTACAAGATATCCGCAGCCACAGATTCGATCGACTGGATGATGATCAGCACCATGCCTGGACTGGTGCACAACCTGCTTCCTGA MSLPAALSPPSLYSIPYSQPPLPTSRTSILSHSLQISHTLLRASRRTSNFSQGVDHLVDDRRNWNRSISSDFDIIGGEDDEDDEDEENEEEDRSLDLLVRFVENVFRKVSKRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWILKAFLEVICTLGTAVFVSILIIRGVWTGILYLQDIRSHRFDRLDDDQHHAWTGAQPAS
BLAST of CmaCh11G016920.1 vs. TrEMBL
Match: A0A0A0K2W4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070780 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 7.7e-81 Identity = 166/205 (80.98%), Postives = 184/205 (89.76%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. TrEMBL
Match: A0A061E0E9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007264 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 4.7e-54 Identity = 128/208 (61.54%), Postives = 156/208 (75.00%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. TrEMBL
Match: V4RNQ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029333mg PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 9.8e-52 Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. TrEMBL
Match: D7T3P4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00370 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 8.3e-51 Identity = 113/163 (69.33%), Postives = 133/163 (81.60%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. TrEMBL
Match: A0A0B0NWW4_GOSAR (ATP phosphoribosyltransferase regulatory subunit OS=Gossypium arboreum GN=F383_00468 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 7.0e-50 Identity = 118/208 (56.73%), Postives = 148/208 (71.15%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. TAIR10
Match: AT4G33780.1 (AT4G33780.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 190.3 bits (482), Expect = 1.2e-48 Identity = 117/207 (56.52%), Postives = 146/207 (70.53%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. TAIR10
Match: AT1G69935.1 (AT1G69935.1 short hypocotyl in white light1) HSP 1 Score: 94.4 bits (233), Expect = 8.9e-20 Identity = 66/180 (36.67%), Postives = 101/180 (56.11%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. NCBI nr
Match: gi|659110111|ref|XP_008455053.1| (PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo]) HSP 1 Score: 320.9 bits (821), Expect = 1.7e-84 Identity = 171/205 (83.41%), Postives = 188/205 (91.71%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. NCBI nr
Match: gi|778724801|ref|XP_004136931.2| (PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus]) HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80 Identity = 166/205 (80.98%), Postives = 184/205 (89.76%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. NCBI nr
Match: gi|590687524|ref|XP_007042688.1| (Uncharacterized protein TCM_007264 [Theobroma cacao]) HSP 1 Score: 219.2 bits (557), Expect = 6.8e-54 Identity = 128/208 (61.54%), Postives = 156/208 (75.00%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. NCBI nr
Match: gi|568867095|ref|XP_006486880.1| (PREDICTED: uncharacterized protein LOC102621139 [Citrus sinensis]) HSP 1 Score: 216.9 bits (551), Expect = 3.4e-53 Identity = 117/163 (71.78%), Postives = 139/163 (85.28%), Query Frame = 1
BLAST of CmaCh11G016920.1 vs. NCBI nr
Match: gi|567860188|ref|XP_006422748.1| (hypothetical protein CICLE_v10029333mg [Citrus clementina]) HSP 1 Score: 211.5 bits (537), Expect = 1.4e-51 Identity = 115/163 (70.55%), Postives = 137/163 (84.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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