CmaCh06G011970 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G011970
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRapid alkalinization factor 1
LocationCma_Chr06 : 8010973 .. 8012589 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAACCCACTCTGTTCTTCCTTCTTTCCATCCTCCTTCCACTCATTTTCCTTCAAACCCATTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCCTAACAGAGCCACAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGTCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGGTCATTACTAGATGTGCTAGAGATGTGCACGATATAAACACTTGAAGGCAATGGCGATGGCGAAGGTAATGTGAGGAATAGTGTTTTGATTTTTTGATTTGGTTTTTGAAATGTGGGTTTGAGATATGATTGTTGATTTGGGTTTGGATTGGTGTGTTCATGTGCTGCATTGTTGATTTGTGATGAGATCTGGGGTTTTTCCATGGGGGAGGCTTGAGATTTGGTTGTGTTCTCTGGTTTTGTTTAGTGGGGTCTGTGATTTTGTATAGTATTGACTTGATTTAGCCATAAGGGTTTGTGTAGTTCTGATGGATTTCCTAATCTTGTGAGGTTTGTTCTTGTGTTCTTGTGTTGAAAAAAACGAAAGTATGGCCTTATTCTTCCAAGAACGGACTAAGAGGGTCAGCTACCCAACTAATCTTCATAATTAAATACCGTTACTGTATAGGTAGATCTCGTTGTGAAAGACCGATTACTAGCTAATTCATGGGTAGAGCCAAAGAGGGTGAACTGTACAAGTTAACAATAACATTGATGAAATAAAAGAAGGAGCTCCGGTGTATAGAGAGGACCTCACCGTTTAAGAAGTAACCATAGAAACGAAGGAACCCACTATTTCTTTATCCATTTGCTAGAAAATATTGTCGGCTTTGGCTCATTACTCACCTAATCTCTTGTAACAACTAAAGTCTACCGCTAGTAGATTTGTCCGCTTTGGCCCGTACATATCACCATCAGCCTCCCCTCAACTTTTGGCCCGTATATATCACCATCCGCCTCACCTCAACTTTTGTAACAACTAAAGTCCACCGCTAGTAGATACAATTCAACCAATGTGAGATCTCACAATCCACCCCTTGGAAGCCTAGCGTCCTCGCTGGCATATTGCCCGATGACTGGCTCTAGTTCTGATACTATTTGTAACAGCCCAAGCCCATCGCTAATAGATATGGTCTGCTTTAGCCCGTTATATATCGCCATCGCTAGAACACTGCCCAGTGACTGACTCTTAATCAAATTTATGGTTTCTATTGGTGCAAATCCAATCAATTTATAAGAGTCCAAGTTCATTGCTAGTAGATATTGTCCACTCTGGCCCGTTACACCTCTTGGTTGCATATACTTGCTTCATATGGAGAAACTCATGGCTACTATAGGAAAAAGTGTTGTAGAAGAGAAAGGTAGAGATATATATCTCCTAGGGCGTATTTTTGTGAAAGATCTTATCTTCGTTAGTTAAAGGCTGAGAGGCTGAGAATGACCCATCCCCGGAGGGAATAG

mRNA sequence

ATGGCAAAACCCACTCTGTTCTTCCTTCTTTCCATCCTCCTTCCACTCATTTTCCTTCAAACCCATTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCCTAACAGAGCCACAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGTCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGTTAAAGGCTGAGAGGCTGAGAATGACCCATCCCCGGAGGGAATAG

Coding sequence (CDS)

ATGGCAAAACCCACTCTGTTCTTCCTTCTTTCCATCCTCCTTCCACTCATTTTCCTTCAAACCCATTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCCTAACAGAGCCACAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGTCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGTTAAAGGCTGAGAGGCTGAGAATGACCCATCCCCGGAGGGAATAG

Protein sequence

MAKPTLFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTHPRRE
Homology
[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RLF24_ARATH (Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 8.8e-20
Identity = 57/114 (50.00%), Postives = 71/114 (62.28%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEISRR 68
           L  + L L+ LQTH       + + S+ G +ID M     N  IGE   E  M SEISRR
Sbjct: 5   LALVYLSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRR 64

Query: 69  VLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           V+MM+K+YISYETLRRDMVPC +PG SYY C  G AN+Y+RGC +     R T+
Sbjct: 65  VMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTN 114

[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RLF31_ARATH (Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.3e-18
Identity = 44/64 (68.75%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 49  NQKIGECLTEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD 108
           N  IGE   E  M +EISRRVLM QKRYI YETLRRDMVPC +PG SYY+C  G ANSY 
Sbjct: 38  NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYS 97

Query: 109 RGCE 113
           RGC+
Sbjct: 98  RGCD 99

[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 1 

Query: 46  GVCNQKIGECLTEPQ---MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG 105
           G C   IGEC+ E +   ++SE +RR+L   K+YISY  L+++ VPCSR G SYY C PG
Sbjct: 39  GGCKGSIGECIAEEEEFELDSESNRRILAT-KKYISYGALQKNSVPCSRRGASYYNCKPG 98

Query: 106 -PANSYDRGC 112
             AN Y RGC
Sbjct: 99  AQANPYSRGC 107

[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 48  CNQKIGECL--TEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PA 107
           C+  I EC+   E +M+SEI+RR+L   K YISY++L+R+ VPCSR G SYY C  G  A
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRILATTK-YISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 108 NSYDRGC 112
           N Y RGC
Sbjct: 107 NPYSRGC 112

[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1 

Query: 48  CNQKIGECLTEPQ---MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-P 107
           C   I EC+ E +    +S+ISRR+L  QK+YISY  +RR+ VPCSR G SYY C  G  
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILA-QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 108 ANSYDRGC 112
           AN Y RGC
Sbjct: 105 ANPYSRGC 111

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: A0A0A0L7V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129640 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.3e-49
Identity = 92/117 (78.63%), Postives = 105/117 (89.74%), Query Frame = 1 

Query: 6   LFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEI 65
           LFFL SI+ PL+FLQTHF FCDA+LDLRS KG+++++M KGVCNQKIGECLT+P+MESEI
Sbjct: 7   LFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMEVMAKGVCNQKIGECLTDPEMESEI 66

Query: 66  SRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCE+     R  H
Sbjct: 67  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVH 123

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: M5XU33_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013295mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-29
Identity = 69/109 (63.30%), Postives = 79/109 (72.48%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAV--LDLRSLKGNQIDLMPKG--VCNQKIGECLTEPQMESE 68
           +L   L L+ + THF  C+ V   DL SLKG+ ID M      CNQKIGECLTEP+MESE
Sbjct: 10  MLISCLSLLLIHTHFSICNGVSAFDLNSLKGSGIDGMVGAGRACNQKIGECLTEPEMESE 69

Query: 69  ISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
           ISRRVL MQK+YISYETLRRD+VPC +PG SYY CH   AN Y RGCE+
Sbjct: 70  ISRRVLAMQKKYISYETLRRDLVPCGKPGASYYNCHAVAANPYSRGCEV 118

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: A0A067KSY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01083 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-29
Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 1 

Query: 1   MAKPTLFFLLSILLPLIFLQTHFPFCD--AVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           M++P L+     +L LIFL THF  C+  +V  L SL+  +ID +    C +KIG+CL E
Sbjct: 1   MSRPKLY-----ILALIFLYTHFSICNGVSVSGLNSLEITEIDAIVSRPCTRKIGDCLEE 60

Query: 61  PQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
            +MESEISRRVL+MQK+YISYETL+RDMVPC++PG SYY+CH G AN Y RGCE+
Sbjct: 61  AEMESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEV 110

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: B9S9Y5_RICCO (RALFL33, putative OS=Ricinus communis GN=RCOM_0523490 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-27
Identity = 64/113 (56.64%), Postives = 81/113 (71.68%), Query Frame = 1 

Query: 1   MAKPTLFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQ 60
           M +PT F LL+ LL    L T F  C+ V  +   K  ++D + + VC +KIG+C  EP+
Sbjct: 1   MLRPT-FCLLAFLL----LHTLFTICNGV-SVSGFKNTEVDAIMRRVCTKKIGDCFEEPE 60

Query: 61  MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
           MESEISRRVL+MQK+YISYETL+RDMVPC +PG SYY+CH G AN Y RGCE+
Sbjct: 61  MESEISRRVLVMQKKYISYETLKRDMVPCDKPGASYYDCHAGEANPYSRGCEM 107

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: A0A0L9T499_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan102s006500 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.4e-26
Identity = 60/117 (51.28%), Postives = 83/117 (70.94%), Query Frame = 1 

Query: 1   MAKPTLFFLLSILLPLIFLQTHFPFCDAV--LDLRSLKGNQIDLMPKGVCNQKIGECL-- 60
           M++P    ++S+ L L+ L  H P C+ +  +DL  LK N++ +M K VC + IGECL  
Sbjct: 1   MSQPRFLSIVSLCLTLLLLHAHLPICNGLSFVDLNLLKQNEMAVMTKRVCTKTIGECLSL 60

Query: 61  TEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
           T+P M+SE +RRVL MQ++YISYETL++DMVPC R G SYY CH  PA+ Y+RGCE+
Sbjct: 61  TDPDMDSETNRRVLEMQRKYISYETLKKDMVPCDRAGASYYNCHAIPAHPYNRGCEV 117

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT3G23805.1 (AT3G23805.1 ralf-like 24)

HSP 1 Score: 97.8 bits (242), Expect = 5.0e-21
Identity = 57/114 (50.00%), Postives = 71/114 (62.28%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEISRR 68
           L  + L L+ LQTH       + + S+ G +ID M     N  IGE   E  M SEISRR
Sbjct: 5   LALVYLSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRR 64

Query: 69  VLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           V+MM+K+YISYETLRRDMVPC +PG SYY C  G AN+Y+RGC +     R T+
Sbjct: 65  VMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTN 114

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT4G13950.1 (AT4G13950.1 ralf-like 31)

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-19
Identity = 44/64 (68.75%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 49  NQKIGECLTEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD 108
           N  IGE   E  M +EISRRVLM QKRYI YETLRRDMVPC +PG SYY+C  G ANSY 
Sbjct: 38  NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYS 97

Query: 109 RGCE 113
           RGC+
Sbjct: 98  RGCD 99

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 70.5 bits (171), Expect = 8.5e-13
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 48  CNQKIGECL--TEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PA 107
           C+  I EC+   E +M+SEI+RR+L   K YISY++L+R+ VPCSR G SYY C  G  A
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRILATTK-YISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 108 NSYDRGC 112
           N Y RGC
Sbjct: 107 NPYSRGC 112

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1 

Query: 48  CNQKIGECLTEPQ---MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-P 107
           C   I EC+ E +    +S+ISRR+L  QK+YISY  +RR+ VPCSR G SYY C  G  
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILA-QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 108 ANSYDRGC 112
           AN Y RGC
Sbjct: 105 ANPYSRGC 111

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-12
Identity = 47/106 (44.34%), Postives = 58/106 (54.72%), Query Frame = 1 

Query: 12  ILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLT-----EPQMESEIS 71
           + + +  L  HF F  AV    S  G+ + +  K  CN  I EC       E +M+SEI+
Sbjct: 9   VAIIIAILTVHFLFA-AVTSQSS--GDFVPIESK--CNGTIAECSLSTAEEEFEMDSEIN 68

Query: 72  RRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGC 112
           RR+L   K YISY  LRR+ VPCSR G SYY C  G  AN Y RGC
Sbjct: 69  RRILATTK-YISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGC 108

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|659075762|ref|XP_008438316.1| (PREDICTED: protein RALF-like 24 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 6.9e-49
Identity = 92/116 (79.31%), Postives = 104/116 (89.66%), Query Frame = 1 

Query: 7   FFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEIS 66
           FFL SI+ PL+FLQTHF FCDA+LDLRS KG+++D+M KGVCNQKIGECLT+P+MESEIS
Sbjct: 9   FFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMDVMAKGVCNQKIGECLTDPEMESEIS 68

Query: 67  RRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           RRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCE+     R  H
Sbjct: 69  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVH 124

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|778677782|ref|XP_011650863.1| (PREDICTED: protein RALF-like 24 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-48
Identity = 92/117 (78.63%), Postives = 105/117 (89.74%), Query Frame = 1 

Query: 6   LFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEI 65
           LFFL SI+ PL+FLQTHF FCDA+LDLRS KG+++++M KGVCNQKIGECLT+P+MESEI
Sbjct: 7   LFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMEVMAKGVCNQKIGECLTDPEMESEI 66

Query: 66  SRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCE+     R  H
Sbjct: 67  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVH 123

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|596217112|ref|XP_007223934.1| (hypothetical protein PRUPE_ppa013295mg [Prunus persica])

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-29
Identity = 69/109 (63.30%), Postives = 79/109 (72.48%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAV--LDLRSLKGNQIDLMPKG--VCNQKIGECLTEPQMESE 68
           +L   L L+ + THF  C+ V   DL SLKG+ ID M      CNQKIGECLTEP+MESE
Sbjct: 10  MLISCLSLLLIHTHFSICNGVSAFDLNSLKGSGIDGMVGAGRACNQKIGECLTEPEMESE 69

Query: 69  ISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
           ISRRVL MQK+YISYETLRRD+VPC +PG SYY CH   AN Y RGCE+
Sbjct: 70  ISRRVLAMQKKYISYETLRRDLVPCGKPGASYYNCHAVAANPYSRGCEV 118

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|645232307|ref|XP_008222806.1| (PREDICTED: protein RALF-like 24 [Prunus mume])

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-29
Identity = 68/109 (62.39%), Postives = 78/109 (71.56%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAV--LDLRSLKGNQIDLMPKG--VCNQKIGECLTEPQMESE 68
           +L   L L+ + THF  C+ V   DL SLKG+ ID M      CNQKIGECLTEP+MESE
Sbjct: 54  MLISYLSLLLIHTHFSICNGVSAFDLNSLKGSGIDGMVGAGRACNQKIGECLTEPEMESE 113

Query: 69  ISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
            SRRVL MQK+YISYETLRRD+VPC +PG SYY CH   AN Y RGCE+
Sbjct: 114 TSRRVLAMQKKYISYETLRRDLVPCGKPGASYYNCHAVAANPYSRGCEV 162

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|643732134|gb|KDP39326.1| (hypothetical protein JCGZ_01083 [Jatropha curcas])

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-29
Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 1 

Query: 1   MAKPTLFFLLSILLPLIFLQTHFPFCD--AVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           M++P L+     +L LIFL THF  C+  +V  L SL+  +ID +    C +KIG+CL E
Sbjct: 1   MSRPKLY-----ILALIFLYTHFSICNGVSVSGLNSLEITEIDAIVSRPCTRKIGDCLEE 60

Query: 61  PQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
            +MESEISRRVL+MQK+YISYETL+RDMVPC++PG SYY+CH G AN Y RGCE+
Sbjct: 61  AEMESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEV 110

The following BLAST results are available for this feature:
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF24_ARATH8.8e-2050.00Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1[more]
RLF31_ARATH8.3e-1868.75Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1[more]
RALF_TOBAC1.2e-1151.43Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1[more]
RLF1_ARATH1.5e-1153.73Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1[more]
RLF22_ARATH2.0e-1152.94Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
BLAST of CmaCh06G011970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7V8_CUCSA8.3e-4978.63Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129640 PE=4 SV=1[more]
M5XU33_PRUPE1.5e-2963.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013295mg PE=4 SV=1[more]
A0A067KSY9_JATCU5.6e-2957.39Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01083 PE=4 SV=1[more]
B9S9Y5_RICCO1.4e-2756.64RALFL33, putative OS=Ricinus communis GN=RCOM_0523490 PE=4 SV=1[more]
A0A0L9T499_PHAAN4.4e-2651.28Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan102s006500 PE=4 SV=1[more]
BLAST of CmaCh06G011970 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23805.15.0e-2150.00 ralf-like 24[more]
AT4G13950.14.7e-1968.75 ralf-like 31[more]
AT1G02900.18.5e-1353.73 rapid alkalinization factor 1[more]
AT3G05490.11.1e-1252.94 ralf-like 22[more]
AT4G15800.19.4e-1244.34 ralf-like 33[more]
BLAST of CmaCh06G011970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075762|ref|XP_008438316.1|6.9e-4979.31PREDICTED: protein RALF-like 24 [Cucumis melo][more]
gi|778677782|ref|XP_011650863.1|1.2e-4878.63PREDICTED: protein RALF-like 24 [Cucumis sativus][more]
gi|596217112|ref|XP_007223934.1|2.1e-2963.30hypothetical protein PRUPE_ppa013295mg [Prunus persica][more]
gi|645232307|ref|XP_008222806.1|8.0e-2962.39PREDICTED: protein RALF-like 24 [Prunus mume][more]
gi|643732134|gb|KDP39326.1|8.0e-2957.39hypothetical protein JCGZ_01083 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G011970.1CmaCh06G011970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 59..112
score: 2.0
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 5..121
score: 1.4
NoneNo IPR availablePANTHERPTHR33136:SF10PROTEIN RALF-LIKE 24-RELATEDcoord: 5..121
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G011970Cucsa.256690Cucumber (Gy14) v1cgycmaB0727
CmaCh06G011970Cla021396Watermelon (97103) v1cmawmB798
CmaCh06G011970Csa3G129640Cucumber (Chinese Long) v2cmacuB814
CmaCh06G011970MELO3C006289Melon (DHL92) v3.5.1cmameB763
CmaCh06G011970ClCG05G003080Watermelon (Charleston Gray)cmawcgB737
CmaCh06G011970CSPI03G10560Wild cucumber (PI 183967)cmacpiB826
CmaCh06G011970CmoCh14G019670Cucurbita moschata (Rifu)cmacmoB797
CmaCh06G011970CmoCh06G012340Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G011970Lsi05G018650Bottle gourd (USVL1VR-Ls)cmalsiB764
CmaCh06G011970Cp4.1LG03g17800Cucurbita pepo (Zucchini)cmacpeB837
CmaCh06G011970Cp4.1LG08g02630Cucurbita pepo (Zucchini)cmacpeB854
CmaCh06G011970CsaV3_3G010700Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G011970Cla97C05G083710Watermelon (97103) v2cmawmbB856
CmaCh06G011970Bhi01G000140Wax gourdcmawgoB1007
CmaCh06G011970Carg14912Silver-seed gourdcarcmaB0877
CmaCh06G011970Carg06309Silver-seed gourdcarcmaB1325
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G011970Silver-seed gourdcarcmaB0317
CmaCh06G011970Silver-seed gourdcarcmaB1493
CmaCh06G011970Silver-seed gourdcarcmaB1494
CmaCh06G011970Watermelon (97103) v2cmawmbB865
CmaCh06G011970Cucurbita maxima (Rimu)cmacmaB285
CmaCh06G011970Cucurbita maxima (Rimu)cmacmaB370
CmaCh06G011970Cucurbita maxima (Rimu)cmacmaB557
CmaCh06G011970Cucurbita moschata (Rifu)cmacmoB811
CmaCh06G011970Cucurbita moschata (Rifu)cmacmoB837
CmaCh06G011970Cucurbita pepo (Zucchini)cmacpeB811
CmaCh06G011970Cucurbita pepo (Zucchini)cmacpeB823
CmaCh06G011970Cucumber (Gy14) v2cgybcmaB427
CmaCh06G011970Melon (DHL92) v3.6.1cmamedB863