CmaCh06G011970 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G011970
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRapid alkalinization factor 1
LocationCma_Chr06 : 8010973 .. 8012589 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAACCCACTCTGTTCTTCCTTCTTTCCATCCTCCTTCCACTCATTTTCCTTCAAACCCATTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCCTAACAGAGCCACAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGTCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGGTCATTACTAGATGTGCTAGAGATGTGCACGATATAAACACTTGAAGGCAATGGCGATGGCGAAGGTAATGTGAGGAATAGTGTTTTGATTTTTTGATTTGGTTTTTGAAATGTGGGTTTGAGATATGATTGTTGATTTGGGTTTGGATTGGTGTGTTCATGTGCTGCATTGTTGATTTGTGATGAGATCTGGGGTTTTTCCATGGGGGAGGCTTGAGATTTGGTTGTGTTCTCTGGTTTTGTTTAGTGGGGTCTGTGATTTTGTATAGTATTGACTTGATTTAGCCATAAGGGTTTGTGTAGTTCTGATGGATTTCCTAATCTTGTGAGGTTTGTTCTTGTGTTCTTGTGTTGAAAAAAACGAAAGTATGGCCTTATTCTTCCAAGAACGGACTAAGAGGGTCAGCTACCCAACTAATCTTCATAATTAAATACCGTTACTGTATAGGTAGATCTCGTTGTGAAAGACCGATTACTAGCTAATTCATGGGTAGAGCCAAAGAGGGTGAACTGTACAAGTTAACAATAACATTGATGAAATAAAAGAAGGAGCTCCGGTGTATAGAGAGGACCTCACCGTTTAAGAAGTAACCATAGAAACGAAGGAACCCACTATTTCTTTATCCATTTGCTAGAAAATATTGTCGGCTTTGGCTCATTACTCACCTAATCTCTTGTAACAACTAAAGTCTACCGCTAGTAGATTTGTCCGCTTTGGCCCGTACATATCACCATCAGCCTCCCCTCAACTTTTGGCCCGTATATATCACCATCCGCCTCACCTCAACTTTTGTAACAACTAAAGTCCACCGCTAGTAGATACAATTCAACCAATGTGAGATCTCACAATCCACCCCTTGGAAGCCTAGCGTCCTCGCTGGCATATTGCCCGATGACTGGCTCTAGTTCTGATACTATTTGTAACAGCCCAAGCCCATCGCTAATAGATATGGTCTGCTTTAGCCCGTTATATATCGCCATCGCTAGAACACTGCCCAGTGACTGACTCTTAATCAAATTTATGGTTTCTATTGGTGCAAATCCAATCAATTTATAAGAGTCCAAGTTCATTGCTAGTAGATATTGTCCACTCTGGCCCGTTACACCTCTTGGTTGCATATACTTGCTTCATATGGAGAAACTCATGGCTACTATAGGAAAAAGTGTTGTAGAAGAGAAAGGTAGAGATATATATCTCCTAGGGCGTATTTTTGTGAAAGATCTTATCTTCGTTAGTTAAAGGCTGAGAGGCTGAGAATGACCCATCCCCGGAGGGAATAG

mRNA sequence

ATGGCAAAACCCACTCTGTTCTTCCTTCTTTCCATCCTCCTTCCACTCATTTTCCTTCAAACCCATTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCCTAACAGAGCCACAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGTCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGTTAAAGGCTGAGAGGCTGAGAATGACCCATCCCCGGAGGGAATAG

Coding sequence (CDS)

ATGGCAAAACCCACTCTGTTCTTCCTTCTTTCCATCCTCCTTCCACTCATTTTCCTTCAAACCCATTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCCTAACAGAGCCACAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGTCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGTTAAAGGCTGAGAGGCTGAGAATGACCCATCCCCGGAGGGAATAG

Protein sequence

MAKPTLFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTHPRRE
Homology
[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RLF24_ARATH (Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 8.8e-20
Identity = 57/114 (50.00%), Postives = 71/114 (62.28%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEISRR 68
           L  + L L+ LQTH       + + S+ G +ID M     N  IGE   E  M SEISRR
Sbjct: 5   LALVYLSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRR 64

Query: 69  VLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           V+MM+K+YISYETLRRDMVPC +PG SYY C  G AN+Y+RGC +     R T+
Sbjct: 65  VMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTN 114

[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RLF31_ARATH (Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.3e-18
Identity = 44/64 (68.75%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 49  NQKIGECLTEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD 108
           N  IGE   E  M +EISRRVLM QKRYI YETLRRDMVPC +PG SYY+C  G ANSY 
Sbjct: 38  NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYS 97

Query: 109 RGCE 113
           RGC+
Sbjct: 98  RGCD 99

[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 1 

Query: 46  GVCNQKIGECLTEPQ---MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG 105
           G C   IGEC+ E +   ++SE +RR+L   K+YISY  L+++ VPCSR G SYY C PG
Sbjct: 39  GGCKGSIGECIAEEEEFELDSESNRRILAT-KKYISYGALQKNSVPCSRRGASYYNCKPG 98

Query: 106 -PANSYDRGC 112
             AN Y RGC
Sbjct: 99  AQANPYSRGC 107

[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 48  CNQKIGECL--TEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PA 107
           C+  I EC+   E +M+SEI+RR+L   K YISY++L+R+ VPCSR G SYY C  G  A
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRILATTK-YISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 108 NSYDRGC 112
           N Y RGC
Sbjct: 107 NPYSRGC 112

[Close]
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1 

Query: 48  CNQKIGECLTEPQ---MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-P 107
           C   I EC+ E +    +S+ISRR+L  QK+YISY  +RR+ VPCSR G SYY C  G  
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILA-QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 108 ANSYDRGC 112
           AN Y RGC
Sbjct: 105 ANPYSRGC 111

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: A0A0A0L7V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129640 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.3e-49
Identity = 92/117 (78.63%), Postives = 105/117 (89.74%), Query Frame = 1 

Query: 6   LFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEI 65
           LFFL SI+ PL+FLQTHF FCDA+LDLRS KG+++++M KGVCNQKIGECLT+P+MESEI
Sbjct: 7   LFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMEVMAKGVCNQKIGECLTDPEMESEI 66

Query: 66  SRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCE+     R  H
Sbjct: 67  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVH 123

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: M5XU33_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013295mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-29
Identity = 69/109 (63.30%), Postives = 79/109 (72.48%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAV--LDLRSLKGNQIDLMPKG--VCNQKIGECLTEPQMESE 68
           +L   L L+ + THF  C+ V   DL SLKG+ ID M      CNQKIGECLTEP+MESE
Sbjct: 10  MLISCLSLLLIHTHFSICNGVSAFDLNSLKGSGIDGMVGAGRACNQKIGECLTEPEMESE 69

Query: 69  ISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
           ISRRVL MQK+YISYETLRRD+VPC +PG SYY CH   AN Y RGCE+
Sbjct: 70  ISRRVLAMQKKYISYETLRRDLVPCGKPGASYYNCHAVAANPYSRGCEV 118

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: A0A067KSY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01083 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-29
Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 1 

Query: 1   MAKPTLFFLLSILLPLIFLQTHFPFCD--AVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           M++P L+     +L LIFL THF  C+  +V  L SL+  +ID +    C +KIG+CL E
Sbjct: 1   MSRPKLY-----ILALIFLYTHFSICNGVSVSGLNSLEITEIDAIVSRPCTRKIGDCLEE 60

Query: 61  PQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
            +MESEISRRVL+MQK+YISYETL+RDMVPC++PG SYY+CH G AN Y RGCE+
Sbjct: 61  AEMESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEV 110

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: B9S9Y5_RICCO (RALFL33, putative OS=Ricinus communis GN=RCOM_0523490 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-27
Identity = 64/113 (56.64%), Postives = 81/113 (71.68%), Query Frame = 1 

Query: 1   MAKPTLFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQ 60
           M +PT F LL+ LL    L T F  C+ V  +   K  ++D + + VC +KIG+C  EP+
Sbjct: 1   MLRPT-FCLLAFLL----LHTLFTICNGV-SVSGFKNTEVDAIMRRVCTKKIGDCFEEPE 60

Query: 61  MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
           MESEISRRVL+MQK+YISYETL+RDMVPC +PG SYY+CH G AN Y RGCE+
Sbjct: 61  MESEISRRVLVMQKKYISYETLKRDMVPCDKPGASYYDCHAGEANPYSRGCEM 107

[Close]
BLAST of CmaCh06G011970 vs. TrEMBL
Match: A0A0L9T499_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan102s006500 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.4e-26
Identity = 60/117 (51.28%), Postives = 83/117 (70.94%), Query Frame = 1 

Query: 1   MAKPTLFFLLSILLPLIFLQTHFPFCDAV--LDLRSLKGNQIDLMPKGVCNQKIGECL-- 60
           M++P    ++S+ L L+ L  H P C+ +  +DL  LK N++ +M K VC + IGECL  
Sbjct: 1   MSQPRFLSIVSLCLTLLLLHAHLPICNGLSFVDLNLLKQNEMAVMTKRVCTKTIGECLSL 60

Query: 61  TEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
           T+P M+SE +RRVL MQ++YISYETL++DMVPC R G SYY CH  PA+ Y+RGCE+
Sbjct: 61  TDPDMDSETNRRVLEMQRKYISYETLKKDMVPCDRAGASYYNCHAIPAHPYNRGCEV 117

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT3G23805.1 (AT3G23805.1 ralf-like 24)

HSP 1 Score: 97.8 bits (242), Expect = 5.0e-21
Identity = 57/114 (50.00%), Postives = 71/114 (62.28%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEISRR 68
           L  + L L+ LQTH       + + S+ G +ID M     N  IGE   E  M SEISRR
Sbjct: 5   LALVYLSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRR 64

Query: 69  VLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           V+MM+K+YISYETLRRDMVPC +PG SYY C  G AN+Y+RGC +     R T+
Sbjct: 65  VMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTN 114

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT4G13950.1 (AT4G13950.1 ralf-like 31)

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-19
Identity = 44/64 (68.75%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 49  NQKIGECLTEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD 108
           N  IGE   E  M +EISRRVLM QKRYI YETLRRDMVPC +PG SYY+C  G ANSY 
Sbjct: 38  NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYS 97

Query: 109 RGCE 113
           RGC+
Sbjct: 98  RGCD 99

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 70.5 bits (171), Expect = 8.5e-13
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 48  CNQKIGECL--TEPQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PA 107
           C+  I EC+   E +M+SEI+RR+L   K YISY++L+R+ VPCSR G SYY C  G  A
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRILATTK-YISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 108 NSYDRGC 112
           N Y RGC
Sbjct: 107 NPYSRGC 112

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1 

Query: 48  CNQKIGECLTEPQ---MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-P 107
           C   I EC+ E +    +S+ISRR+L  QK+YISY  +RR+ VPCSR G SYY C  G  
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILA-QKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 108 ANSYDRGC 112
           AN Y RGC
Sbjct: 105 ANPYSRGC 111

[Close]
BLAST of CmaCh06G011970 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-12
Identity = 47/106 (44.34%), Postives = 58/106 (54.72%), Query Frame = 1 

Query: 12  ILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLT-----EPQMESEIS 71
           + + +  L  HF F  AV    S  G+ + +  K  CN  I EC       E +M+SEI+
Sbjct: 9   VAIIIAILTVHFLFA-AVTSQSS--GDFVPIESK--CNGTIAECSLSTAEEEFEMDSEIN 68

Query: 72  RRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGC 112
           RR+L   K YISY  LRR+ VPCSR G SYY C  G  AN Y RGC
Sbjct: 69  RRILATTK-YISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGC 108

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|659075762|ref|XP_008438316.1| (PREDICTED: protein RALF-like 24 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 6.9e-49
Identity = 92/116 (79.31%), Postives = 104/116 (89.66%), Query Frame = 1 

Query: 7   FFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEIS 66
           FFL SI+ PL+FLQTHF FCDA+LDLRS KG+++D+M KGVCNQKIGECLT+P+MESEIS
Sbjct: 9   FFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMDVMAKGVCNQKIGECLTDPEMESEIS 68

Query: 67  RRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           RRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCE+     R  H
Sbjct: 69  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVH 124

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|778677782|ref|XP_011650863.1| (PREDICTED: protein RALF-like 24 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-48
Identity = 92/117 (78.63%), Postives = 105/117 (89.74%), Query Frame = 1 

Query: 6   LFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQMESEI 65
           LFFL SI+ PL+FLQTHF FCDA+LDLRS KG+++++M KGVCNQKIGECLT+P+MESEI
Sbjct: 7   LFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMEVMAKGVCNQKIGECLTDPEMESEI 66

Query: 66  SRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCELKAERLRMTH 123
           SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCE+     R  H
Sbjct: 67  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVH 123

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|596217112|ref|XP_007223934.1| (hypothetical protein PRUPE_ppa013295mg [Prunus persica])

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-29
Identity = 69/109 (63.30%), Postives = 79/109 (72.48%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAV--LDLRSLKGNQIDLMPKG--VCNQKIGECLTEPQMESE 68
           +L   L L+ + THF  C+ V   DL SLKG+ ID M      CNQKIGECLTEP+MESE
Sbjct: 10  MLISCLSLLLIHTHFSICNGVSAFDLNSLKGSGIDGMVGAGRACNQKIGECLTEPEMESE 69

Query: 69  ISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
           ISRRVL MQK+YISYETLRRD+VPC +PG SYY CH   AN Y RGCE+
Sbjct: 70  ISRRVLAMQKKYISYETLRRDLVPCGKPGASYYNCHAVAANPYSRGCEV 118

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|645232307|ref|XP_008222806.1| (PREDICTED: protein RALF-like 24 [Prunus mume])

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-29
Identity = 68/109 (62.39%), Postives = 78/109 (71.56%), Query Frame = 1 

Query: 9   LLSILLPLIFLQTHFPFCDAV--LDLRSLKGNQIDLMPKG--VCNQKIGECLTEPQMESE 68
           +L   L L+ + THF  C+ V   DL SLKG+ ID M      CNQKIGECLTEP+MESE
Sbjct: 54  MLISYLSLLLIHTHFSICNGVSAFDLNSLKGSGIDGMVGAGRACNQKIGECLTEPEMESE 113

Query: 69  ISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
            SRRVL MQK+YISYETLRRD+VPC +PG SYY CH   AN Y RGCE+
Sbjct: 114 TSRRVLAMQKKYISYETLRRDLVPCGKPGASYYNCHAVAANPYSRGCEV 162

[Close]
BLAST of CmaCh06G011970 vs. NCBI nr
Match: gi|643732134|gb|KDP39326.1| (hypothetical protein JCGZ_01083 [Jatropha curcas])

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-29
Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 1 

Query: 1   MAKPTLFFLLSILLPLIFLQTHFPFCD--AVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           M++P L+     +L LIFL THF  C+  +V  L SL+  +ID +    C +KIG+CL E
Sbjct: 1   MSRPKLY-----ILALIFLYTHFSICNGVSVSGLNSLEITEIDAIVSRPCTRKIGDCLEE 60

Query: 61  PQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEL 114
            +MESEISRRVL+MQK+YISYETL+RDMVPC++PG SYY+CH G AN Y RGCE+
Sbjct: 61  AEMESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEV 110

The following BLAST results are available for this feature:
BLAST of CmaCh06G011970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF24_ARATH8.8e-2050.00Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1[more]
RLF31_ARATH8.3e-1868.75Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1[more]
RALF_TOBAC1.2e-1151.43Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1[more]
RLF1_ARATH1.5e-1153.73Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1[more]
RLF22_ARATH2.0e-1152.94Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
BLAST of CmaCh06G011970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7V8_CUCSA8.3e-4978.63Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129640 PE=4 SV=1[more]
M5XU33_PRUPE1.5e-2963.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013295mg PE=4 SV=1[more]
A0A067KSY9_JATCU5.6e-2957.39Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01083 PE=4 SV=1[more]
B9S9Y5_RICCO1.4e-2756.64RALFL33, putative OS=Ricinus communis GN=RCOM_0523490 PE=4 SV=1[more]
A0A0L9T499_PHAAN4.4e-2651.28Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan102s006500 PE=4 SV=1[more]
BLAST of CmaCh06G011970 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23805.15.0e-2150.00 ralf-like 24[more]
AT4G13950.14.7e-1968.75 ralf-like 31[more]
AT1G02900.18.5e-1353.73 rapid alkalinization factor 1[more]
AT3G05490.11.1e-1252.94 ralf-like 22[more]
AT4G15800.19.4e-1244.34 ralf-like 33[more]
BLAST of CmaCh06G011970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075762|ref|XP_008438316.1|6.9e-4979.31PREDICTED: protein RALF-like 24 [Cucumis melo][more]
gi|778677782|ref|XP_011650863.1|1.2e-4878.63PREDICTED: protein RALF-like 24 [Cucumis sativus][more]
gi|596217112|ref|XP_007223934.1|2.1e-2963.30hypothetical protein PRUPE_ppa013295mg [Prunus persica][more]
gi|645232307|ref|XP_008222806.1|8.0e-2962.39PREDICTED: protein RALF-like 24 [Prunus mume][more]
gi|643732134|gb|KDP39326.1|8.0e-2957.39hypothetical protein JCGZ_01083 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G011970.1CmaCh06G011970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 59..112
score: 2.0
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 5..121
score: 1.4
NoneNo IPR availablePANTHERPTHR33136:SF10PROTEIN RALF-LIKE 24-RELATEDcoord: 5..121
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G011970Cucsa.256690Cucumber (Gy14) v1cgycmaB0727
CmaCh06G011970Cla021396Watermelon (97103) v1cmawmB798
CmaCh06G011970Csa3G129640Cucumber (Chinese Long) v2cmacuB814
CmaCh06G011970MELO3C006289Melon (DHL92) v3.5.1cmameB763
CmaCh06G011970ClCG05G003080Watermelon (Charleston Gray)cmawcgB737
CmaCh06G011970CSPI03G10560Wild cucumber (PI 183967)cmacpiB826
CmaCh06G011970CmoCh14G019670Cucurbita moschata (Rifu)cmacmoB797
CmaCh06G011970CmoCh06G012340Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G011970Lsi05G018650Bottle gourd (USVL1VR-Ls)cmalsiB764
CmaCh06G011970Cp4.1LG03g17800Cucurbita pepo (Zucchini)cmacpeB837
CmaCh06G011970Cp4.1LG08g02630Cucurbita pepo (Zucchini)cmacpeB854
CmaCh06G011970CsaV3_3G010700Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G011970Cla97C05G083710Watermelon (97103) v2cmawmbB856
CmaCh06G011970Bhi01G000140Wax gourdcmawgoB1007
CmaCh06G011970Carg14912Silver-seed gourdcarcmaB0877
CmaCh06G011970Carg06309Silver-seed gourdcarcmaB1325
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G011970Cucumber (Gy14) v2cgybcmaB427
CmaCh06G011970Melon (DHL92) v3.6.1cmamedB863
CmaCh06G011970Silver-seed gourdcarcmaB0317
CmaCh06G011970Silver-seed gourdcarcmaB1493
CmaCh06G011970Silver-seed gourdcarcmaB1494
CmaCh06G011970Watermelon (97103) v2cmawmbB865
CmaCh06G011970Cucurbita maxima (Rimu)cmacmaB285
CmaCh06G011970Cucurbita maxima (Rimu)cmacmaB370
CmaCh06G011970Cucurbita maxima (Rimu)cmacmaB557
CmaCh06G011970Cucurbita moschata (Rifu)cmacmoB811
CmaCh06G011970Cucurbita moschata (Rifu)cmacmoB837
CmaCh06G011970Cucurbita pepo (Zucchini)cmacpeB811
CmaCh06G011970Cucurbita pepo (Zucchini)cmacpeB823