ClCG05G003080 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G003080
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRapid alkalinization factor preproprotein
LocationCG_Chr05 : 2952110 .. 2955512 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGTGAGTGTCTGACTGAGCCAGAAATGGAATCAGAAATCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTACGATACACTTAGAAGGGACATGGTTCCTTGTTCAAGACCAGGTGTTTCATATTATGAATGTCATCCTGGTCCAGCAAATTCTTATGACAGAGGCTGTGAAGTCATTACTAGATGTGCTAGAGATGTTCATGACATAAACACTTGATGATGATGGTGGTGGTGATGGATGGGATGCCACTGGTAAGGCGAGAAATAGAGTTGGTATTTAGTAATTACTTTGTTTTTAAGAATGTGGGTTTGTTTCATAATGCTGCATTTTGGGTTTTAATGGCTGTTTCAATGTGGTGCATTGTTGATTTCTTGAGAGATCTGGGCTTTCCTGTGGGGAAACCCCCGAGATTTGACTCTGCTCTCTGATGTTAAGGATTTTGTGGACTGGAGTCTGTGATTTCGTCTACCAATCCTAAATTTAGCCAATTGGGTCTTCATAACTGATTTCCTTCTCTTGTGTATTTATGTGTCAATTCTTGTTCCTATTTAAAGGAAGAAGATTGGAATGAAGAATGATTTTCTTCTCAGCTCTTTAGGTAATGTAGTTACTGGATTATGAAGATTAAGGTGACAAGGGAAATGCTTAACTTGATTGAAGTTGTGATAAAGGCTAGGGTTGAGAAATGAAACCAGTGTTCTTTGAATGTCAGATAAATCTACTTTGTTGGAAGGGGAAAGTATTGTTTTTAAGATCTTGACTCTAATAGAAATCAACAAGTGCTTTCCCCCTTGGTTGTTTTTGTTCCCCGTGCACGCATGAACTTGCATCATGTCTTTGTTGGAAATGGGGATTCATTGATATAAGTACGATATGAAGATATGGGGTGTGAATGTGATGAAATCAGCTTGCTAGTACAGGAAAGTGTCGGAGAAGAACTAGTCATTTTCGCAAAACTATATCTATTGTGAGAGAGGAAAATATCCCGAAACCTATTTTTGCAAAATATCTGACTCAATGACATCTCTTGTGGAGTGTATATCAAACTTAGGACATTGGAGTGTGAGTGTTCATGACGAATGGCTCCATCCCATGTTTCTGTCGTTCATCATGCATCTCCTCTGTCATTCGTTCCATATATTCCCTCCAAAACAGGTAATCTTTGGAGTTCCTTTCTCATTCCTCTGATTTCAGCCTCAGTTGCTCCCAAACGTTCTTTATACGTTTCTACAACATCTTTCACTTCCTAGGGTTGCAAACAACTCTAATACCACTTGTAAGGATACCTCCTTACTATATTGTATTATTATCTTCCAAGAACAGGATGACAAGGAAAAGTAACAAGAACCTCCTAGCCAATTCGAGAAGGTTGGTAATCTCTTCCACAAGAACTATTGTTTCTATTGCCAAAATACTGAATGCCCACTCCTTTGGCAACGAAAGCTAAAATACCCCCCTTCCCCAACAAACCTTAACAGTTGTACAACTAACAAACGCATCCTACTCCTTCCCTATTGGGAGTGATTTACCAACTTACCCCACCTCTTATTCATTTTAGTAATTAGAGGCCTAAACAGAGTCTTTTGCACTGCAATGTTAAAGGAAATATAGGATTAGAGATTTATCTCTGACGAAGATAGTAACATTCATAGTGCACCAATAGAATGCAAGTAGAGTTTTTGAACTCATGATCTATAATTCTATGAACTCAAGGATGATTTGTTTTCAATATTTTCTTTCATGGCCACTGATTGATCCTATAAGTATTGTCTTTTTTTTTTTGGTCAGTGATTGTTTTTCTCCTTTGTGCATCATTTTGTAGCTGATCTGTTAAAATTCTAGCATGTGATATGTTGCTGCTTAGTTACAGTTTAGTAGAAAGCACCAGACTAATGTTGCAGGTGAAAATCAAAATCACAAGATTGATTTGGGGTCTGATTTCTTACTTCCTTAGGCCTTGCTTGATACCATCTGGTTTTTTATTTTTGGTTTTTGTAACAGAAAACCAAAAATGAAAGGGTTATCAAACAGGGCTTACTGTTATTTACCATTTTACATTTAAAAATTTGAATTAAAACCATAAACCGAATGCTTATCAAACTAGCCAAATTATTATTTACCATTTTACATATAAAATTTGAATTACATTTCTCGATTCCAATATTGGAAGTGTTAGCTTCTGAACTCTGTAAAAGTTACTTTTGAAGAAATTATTATTCTTACTAAAGTAGTTCTTAAACCACCAATGGTCATTGAAACTAATTAAAAGCAAAGGGCTCAACTGTGGTCACTTCCTTAGAGCTTTTAAGTCTCACTCTTGTGATGGAAGGATATTTCGTTCTCATAGTATAACTTGAATTTCCTTTTAACATATATTTGTACTGTTGAATGGTAATTGTATATTTATATGGTAGTTGAAGCTTATCCATAATACCATAATACCAATAGCTATTTAACTTGCTCATCACAGTTGATATATATATGAATAACTTGATACCTGGAAGTCACTTGATTGTCAAGTTCAATATTTGTGTGATGGCGAATGCATTTTAGAAGTTTGAGTCGAGACATTTTTCTTACAAAAATTCTTCAAAAAAGTACAAAGTGCCTTTTGGAAGTTCCCTAACCCAATCCCCTTTGAAGAGTATTTAGACCCTTTTAACTTTAATTTGTAACTATTTAATCCATGTAATTTTTAATTTGAAGCAGTTTAGTCTCTAAAGTTTAGCATGTAAGAATTTAGTTCTATTACTTTCAAATTTGTACAATTTAGTACTTACCATAACAAGTCTCATCAAAATTAATTGTTGAATTTTATTGCCTAATGACTTGACCTTTAGCATGTAATAATATATTTCATGATAGATGAATTGTAAAGTAAAGAGACTAAATTGTTATGAAGTAACGTTTAAAGACTAAATTGTTGCCTCCATAGCCTTAAAGTACAAAGAGAGACCAAAAGTGTATTTTAACCGTCTACTGTTTATGCTTTACATTAATTTACTTGTATTCTTTTGCAACTTGATGATTGTTTCTTTAGTAGAACTGCTCTTCAACATAACTGATTGATTCTGAGAATGTAATTCTGCAACTTCTTGTTGGCAGCCGCTCAACTGTTGTTCCCAGAAGCAAATATCAACTACAGGTTGTTCATTGAGATCGTCAGATAGCAAGAAGACTTATGTGCTTTTGTAAAAAGTAGTGTTGAATTGAATCTTATGATAACTTGAACAGTTGATGTTTTAAGTAAAATGGAATTGCCTTTGAACACCATACATTGTAGCCTTGCTTTTGGATCAGTGTCAAGAATTTGACCTTTTTGTTAAATTCACAAATCATAGCCTTGGCTAGCTCT

mRNA sequence

ATGGATTTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGTGAGTGTCTGACTGAGCCAGAAATGGAATCAGAAATCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTACGATACACTTAGAAGGGACATGGTTCCTTGTTCAAGACCAGCCGCTCAACTGTTGTTCCCAGAAGCAAATATCAACTACAGGTTGTTCATTGAGATCGTCAGATAGCAAGAAGACTTATGTGCTTTTGTAAAAAGTAGTGTTGAATTGAATCTTATGATAACTTGAACAGTTGATGTTTTAAGTAAAATGGAATTGCCTTTGAACACCATACATTGTAGCCTTGCTTTTGGATCAGTGTCAAGAATTTGACCTTTTTGTTAAATTCACAAATCATAGCCTTGGCTAGCTCT

Coding sequence (CDS)

ATGGATTTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGTGAGTGTCTGACTGAGCCAGAAATGGAATCAGAAATCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTACGATACACTTAGAAGGGACATGGTTCCTTGTTCAAGACCAGCCGCTCAACTGTTGTTCCCAGAAGCAAATATCAACTACAGGTTGTTCATTGAGATCGTCAGATAG

Protein sequence

MDLMAKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAAQLLFPEANINYRLFIEIVR
Homology
[Close]
BLAST of ClCG05G003080 vs. Swiss-Prot
Match: RLF24_ARATH (Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-09
Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 1 

Query: 10 NQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          N  IGE   E  M SEISRRV+MM+K+YISY+TLRRDMVPC +P A
Sbjct: 41 NGVIGEEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGA 86

[Close]
BLAST of ClCG05G003080 vs. Swiss-Prot
Match: RLF31_ARATH (Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-08
Identity = 30/46 (65.22%), Postives = 32/46 (69.57%), Query Frame = 1 

Query: 10 NQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          N  IGE   E  M +EISRRVLM QK+YI Y+TLRRDMVPC +P A
Sbjct: 38 NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGA 81

[Close]
BLAST of ClCG05G003080 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.6e-06
Identity = 27/50 (54.00%), Postives = 31/50 (62.00%), Query Frame = 1 

Query: 9  CNQKIGECLTEPE---MESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          C   I EC+ E E    +S+ISRR+L  QKKYISY  +RR+ VPCSR  A
Sbjct: 45 CTGSIAECIAEEEEMEFDSDISRRILA-QKKYISYGAMRRNSVPCSRRGA 93

[Close]
BLAST of ClCG05G003080 vs. TrEMBL
Match: A0A0A0L7V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129640 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.6e-21
Identity = 50/53 (94.34%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MDLMAKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP 54
          M++MAKGVCNQKIGECLT+PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP
Sbjct: 41 MEVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP 93

[Close]
BLAST of ClCG05G003080 vs. TrEMBL
Match: M5XU33_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013295mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.2e-16
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 9  CNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          CNQKIGECLTEPEMESEISRRVL MQKKYISY+TLRRD+VPC +P A
Sbjct: 53 CNQKIGECLTEPEMESEISRRVLAMQKKYISYETLRRDLVPCGKPGA 99

[Close]
BLAST of ClCG05G003080 vs. TrEMBL
Match: B9S9Y5_RICCO (RALFL33, putative OS=Ricinus communis GN=RCOM_0523490 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-14
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 1 

Query: 1  MDLMAKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          +D + + VC +KIG+C  EPEMESEISRRVL+MQKKYISY+TL+RDMVPC +P A
Sbjct: 34 VDAIMRRVCTKKIGDCFEEPEMESEISRRVLVMQKKYISYETLKRDMVPCDKPGA 88

[Close]
BLAST of ClCG05G003080 vs. TrEMBL
Match: A0A0B2SHF2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014516 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-13
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 1 

Query: 1  MDLMAKGVCNQKIGECL--TEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          +D+M K VC + IGECL  TEPEM+SE +RRVL MQKKYISYDTL+RDMVPC R  A
Sbjct: 35 VDVMTKRVCTKSIGECLSLTEPEMDSETNRRVLAMQKKYISYDTLKRDMVPCDRAGA 91

[Close]
BLAST of ClCG05G003080 vs. TrEMBL
Match: A0A0B2QW45_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_025201 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-13
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 1 

Query: 1  MDLMAKGVCNQKIGECL--TEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          +D+M K VC + IGECL  TEPEM+SE +RRVL MQKKYISYDTL+RDMVPC R  A
Sbjct: 35 VDVMTKRVCTKSIGECLSLTEPEMDSETNRRVLAMQKKYISYDTLKRDMVPCDRAGA 91

[Close]
BLAST of ClCG05G003080 vs. TAIR10
Match: AT3G23805.1 (AT3G23805.1 ralf-like 24)

HSP 1 Score: 62.8 bits (151), Expect = 1.0e-10
Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 1 

Query: 10 NQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          N  IGE   E  M SEISRRV+MM+K+YISY+TLRRDMVPC +P A
Sbjct: 41 NGVIGEEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGA 86

[Close]
BLAST of ClCG05G003080 vs. TAIR10
Match: AT4G13950.1 (AT4G13950.1 ralf-like 31)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-09
Identity = 30/46 (65.22%), Postives = 32/46 (69.57%), Query Frame = 1 

Query: 10 NQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          N  IGE   E  M +EISRRVLM QK+YI Y+TLRRDMVPC +P A
Sbjct: 38 NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGA 81

[Close]
BLAST of ClCG05G003080 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 51.2 bits (121), Expect = 3.1e-07
Identity = 27/50 (54.00%), Postives = 31/50 (62.00%), Query Frame = 1 

Query: 9  CNQKIGECLTEPE---MESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          C   I EC+ E E    +S+ISRR+L  QKKYISY  +RR+ VPCSR  A
Sbjct: 45 CTGSIAECIAEEEEMEFDSDISRRILA-QKKYISYGAMRRNSVPCSRRGA 93

[Close]
BLAST of ClCG05G003080 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 49.3 bits (116), Expect = 1.2e-06
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 1 

Query: 9  CNQKIGECL--TEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          C+  I EC+   E EM+SEI+RR+L   K YISY +L+R+ VPCSR  A
Sbjct: 47 CHGSIAECIGAEEEEMDSEINRRILATTK-YISYQSLKRNSVPCSRRGA 94

[Close]
BLAST of ClCG05G003080 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 47.4 bits (111), Expect = 4.5e-06
Identity = 28/52 (53.85%), Postives = 30/52 (57.69%), Query Frame = 1 

Query: 9  CNQKIGECLT-----EPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          CN  I EC       E EM+SEI+RR+L   K YISY  LRR+ VPCSR  A
Sbjct: 40 CNGTIAECSLSTAEEEFEMDSEINRRILATTK-YISYGALRRNTVPCSRRGA 90

[Close]
BLAST of ClCG05G003080 vs. NCBI nr
Match: gi|659075762|ref|XP_008438316.1| (PREDICTED: protein RALF-like 24 [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-21
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MDLMAKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP 54
          MD+MAKGVCNQKIGECLT+PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP
Sbjct: 42 MDVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP 94

[Close]
BLAST of ClCG05G003080 vs. NCBI nr
Match: gi|778677782|ref|XP_011650863.1| (PREDICTED: protein RALF-like 24 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 8.0e-21
Identity = 50/53 (94.34%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MDLMAKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP 54
          M++MAKGVCNQKIGECLT+PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP
Sbjct: 41 MEVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP 93

[Close]
BLAST of ClCG05G003080 vs. NCBI nr
Match: gi|596217112|ref|XP_007223934.1| (hypothetical protein PRUPE_ppa013295mg [Prunus persica])

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-15
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 9  CNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          CNQKIGECLTEPEMESEISRRVL MQKKYISY+TLRRD+VPC +P A
Sbjct: 53 CNQKIGECLTEPEMESEISRRVLAMQKKYISYETLRRDLVPCGKPGA 99

[Close]
BLAST of ClCG05G003080 vs. NCBI nr
Match: gi|645232307|ref|XP_008222806.1| (PREDICTED: protein RALF-like 24 [Prunus mume])

HSP 1 Score: 88.6 bits (218), Expect = 5.0e-15
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1 

Query: 9   CNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
           CNQKIGECLTEPEMESE SRRVL MQKKYISY+TLRRD+VPC +P A
Sbjct: 97  CNQKIGECLTEPEMESETSRRVLAMQKKYISYETLRRDLVPCGKPGA 143

[Close]
BLAST of ClCG05G003080 vs. NCBI nr
Match: gi|223538042|gb|EEF39655.1| (RALFL33, putative [Ricinus communis])

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-14
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 1 

Query: 1  MDLMAKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPAA 56
          +D + + VC +KIG+C  EPEMESEISRRVL+MQKKYISY+TL+RDMVPC +P A
Sbjct: 34 VDAIMRRVCTKKIGDCFEEPEMESEISRRVLVMQKKYISYETLKRDMVPCDKPGA 88

The following BLAST results are available for this feature:
BLAST of ClCG05G003080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF24_ARATH1.9e-0967.39Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1[more]
RLF31_ARATH3.5e-0865.22Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1[more]
RLF22_ARATH5.6e-0654.00Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
BLAST of ClCG05G003080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7V8_CUCSA5.6e-2194.34Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129640 PE=4 SV=1[more]
M5XU33_PRUPE9.2e-1687.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013295mg PE=4 SV=1[more]
B9S9Y5_RICCO1.7e-1469.09RALFL33, putative OS=Ricinus communis GN=RCOM_0523490 PE=4 SV=1[more]
A0A0B2SHF2_GLYSO1.9e-1370.18Uncharacterized protein OS=Glycine soja GN=glysoja_014516 PE=4 SV=1[more]
A0A0B2QW45_GLYSO1.9e-1370.18Uncharacterized protein OS=Glycine soja GN=glysoja_025201 PE=4 SV=1[more]
BLAST of ClCG05G003080 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23805.11.0e-1067.39 ralf-like 24[more]
AT4G13950.12.0e-0965.22 ralf-like 31[more]
AT3G05490.13.1e-0754.00 ralf-like 22[more]
AT1G02900.11.2e-0653.06 rapid alkalinization factor 1[more]
AT4G15800.14.5e-0653.85 ralf-like 33[more]
BLAST of ClCG05G003080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075762|ref|XP_008438316.1|2.8e-2196.23PREDICTED: protein RALF-like 24 [Cucumis melo][more]
gi|778677782|ref|XP_011650863.1|8.0e-2194.34PREDICTED: protein RALF-like 24 [Cucumis sativus][more]
gi|596217112|ref|XP_007223934.1|1.3e-1587.23hypothetical protein PRUPE_ppa013295mg [Prunus persica][more]
gi|645232307|ref|XP_008222806.1|5.0e-1585.11PREDICTED: protein RALF-like 24 [Prunus mume][more]
gi|223538042|gb|EEF39655.1|2.5e-1469.09RALFL33, putative [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019722 calcium-mediated signaling
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003674 molecular_function
molecular_function GO:0004871 signal transducer activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G003080.1ClCG05G003080.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 19..55
score: 1.1
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 1..55
score: 5.3
NoneNo IPR availablePANTHERPTHR33136:SF10PROTEIN RALF-LIKE 24-RELATEDcoord: 1..55
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G003080Csa3G129640Cucumber (Chinese Long) v2cuwcgB222
ClCG05G003080MELO3C006289Melon (DHL92) v3.5.1mewcgB427
ClCG05G003080Cla021396Watermelon (97103) v1wcgwmB286
ClCG05G003080Cla97C05G083710Watermelon (97103) v2wcgwmbB229
ClCG05G003080Bhi01G000140Wax gourdwcgwgoB428
ClCG05G003080CSPI03G10560Wild cucumber (PI 183967)cpiwcgB226
ClCG05G003080Cucsa.256690Cucumber (Gy14) v1cgywcgB451
ClCG05G003080CmaCh06G011970Cucurbita maxima (Rimu)cmawcgB737
ClCG05G003080CmoCh06G012340Cucurbita moschata (Rifu)cmowcgB743
ClCG05G003080CmoCh14G019670Cucurbita moschata (Rifu)cmowcgB219
ClCG05G003080Lsi05G018650Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G003080Cp4.1LG03g17800Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G003080Cp4.1LG08g02630Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G003080Carg14912Silver-seed gourdcarwcgB0602
ClCG05G003080Carg06309Silver-seed gourdcarwcgB0935
ClCG05G003080CsaV3_3G010700Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G003080Cucurbita pepo (Zucchini)cpewcgB293
ClCG05G003080Bottle gourd (USVL1VR-Ls)lsiwcgB016
ClCG05G003080Cucumber (Gy14) v2cgybwcgB203
ClCG05G003080Melon (DHL92) v3.6.1medwcgB416
ClCG05G003080Silver-seed gourdcarwcgB0220
ClCG05G003080Silver-seed gourdcarwcgB1045
ClCG05G003080Watermelon (97103) v2wcgwmbB237
ClCG05G003080Watermelon (Charleston Gray)wcgwcgB160
ClCG05G003080Cucurbita maxima (Rimu)cmawcgB233
ClCG05G003080Cucurbita maxima (Rimu)cmawcgB319
ClCG05G003080Cucurbita moschata (Rifu)cmowcgB315
ClCG05G003080Cucurbita moschata (Rifu)cmowcgB792
ClCG05G003080Cucurbita pepo (Zucchini)cpewcgB138