Carg14912 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14912
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rapid alkalinization factor
Location	Cucurbita_argyrosperma_scaffold_079 : 616787 .. 617167 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAATCCCACTCTCTTCTTCCTTTTTTCCATCCTTCTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGTGATGCGATTCTTGATCTTAGATCTTTGAAGGGCAGTGAAATCGATGTTATGGCAAAAGGGGTTTGCAATCAGAAGATCGGGGAGTGCCTGACTGAGCCAGAAATGGAATCAGAAGTCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTATGACACCCTTAGGAGGGACATGGTTCCTTGTTCAAGACCAGGCGTTTCATATTATGAATGCCATCCTGGTCCAGCAAATTCTTATGACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGATGTGCACGACATAAACACTTGA

mRNA sequence

ATGCCAAATCCCACTCTCTTCTTCCTTTTTTCCATCCTTCTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGTGATGCGATTCTTGATCTTAGATCTTTGAAGGGCAGTGAAATCGATGTTATGGCAAAAGGGGTTTGCAATCAGAAGATCGGGGAGTGCCTGACTGAGCCAGAAATGGAATCAGAAGTCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTATGACACCCTTAGGAGGGACATGGTTCCTTGTTCAAGACCAGGCGTTTCATATTATGAATGCCATCCTGGTCCAGCAAATTCTTATGACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGATGTGCACGACATAAACACTTGA

Coding sequence (CDS)

ATGCCAAATCCCACTCTCTTCTTCCTTTTTTCCATCCTTCTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGTGATGCGATTCTTGATCTTAGATCTTTGAAGGGCAGTGAAATCGATGTTATGGCAAAAGGGGTTTGCAATCAGAAGATCGGGGAGTGCCTGACTGAGCCAGAAATGGAATCAGAAGTCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTATGACACCCTTAGGAGGGACATGGTTCCTTGTTCAAGACCAGGCGTTTCATATTATGAATGCCATCCTGGTCCAGCAAATTCTTATGACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGATGTGCACGACATAAACACTTGA

Protein sequence

MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT

Homology

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BLAST of Carg14912 vs. NCBI nr
Match: XP_023526933.1 (protein RALF-like 24 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.7 bits (670), Expect = 6.4e-67
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE 60
           MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE
Sbjct: 27  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE 86

Query: 61  MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD
Sbjct: 87  MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 146

Query: 121 VHDINT 127
           VHDINT
Sbjct: 147 VHDINT 152

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BLAST of Carg14912 vs. NCBI nr
Match: XP_008438316.1 (PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo] >XP_008438319.1 PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 5.3e-61
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 7   FFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVS 66
           FFLFSI+ PLVFLQTHFSFCDAILDLRS KGSE+DVMAKGVCNQKIGECLT+PEMESE+S
Sbjct: 9   FFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMDVMAKGVCNQKIGECLTDPEMESEIS 68

Query: 67  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 126
           RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT
Sbjct: 69  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 128

[Close]

BLAST of Carg14912 vs. NCBI nr
Match: XP_011650863.1 (PREDICTED: protein RALF-like 24 [Cucumis sativus] >XP_011650864.1 PREDICTED: protein RALF-like 24 [Cucumis sativus] >KGN56707.1 hypothetical protein Csa_3G129640 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 6.9e-61
Identity = 114/121 (94.21%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 6   LFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEV 65
           LFFLFSI+ PLVFLQTHFSFCDAILDLRS KGSE++VMAKGVCNQKIGECLT+PEMESE+
Sbjct: 7   LFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMEVMAKGVCNQKIGECLTDPEMESEI 66

Query: 66  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN 125
           SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN
Sbjct: 67  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN 126

Query: 126 T 127
           T
Sbjct: 127 T 127

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BLAST of Carg14912 vs. NCBI nr
Match: XP_022974738.1 (protein RALF-like 24 [Cucurbita maxima])

HSP 1 Score: 242.7 bits (618), Expect = 6.9e-61
Identity = 112/126 (88.89%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE 60
           M  PTLFFL SILLPL+FLQTHF FCDA+LDLRSLKG++ID+M KGVCNQKIGECLTEP+
Sbjct: 1   MAKPTLFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQ 60

Query: 61  MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           MESE+SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD
Sbjct: 61  MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120

Query: 121 VHDINT 127
           VHDINT
Sbjct: 121 VHDINT 126

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BLAST of Carg14912 vs. NCBI nr
Match: XP_022146989.1 (protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146990.1 protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146991.1 protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146992.1 protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146993.1 protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146994.1 protein RALF-like 24 isoform X1 [Momordica charantia])

HSP 1 Score: 230.7 bits (587), Expect = 2.7e-57
Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE 60
           M  P+L +L  ILL +VF  THFSFCDAILDLRSLKGS+IDVMAKGVCNQKIGECLTEPE
Sbjct: 1   MAKPSLLYLILILLAVVFQHTHFSFCDAILDLRSLKGSKIDVMAKGVCNQKIGECLTEPE 60

Query: 61  MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           MESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYECH GPANSYDRGCEVITRCARD
Sbjct: 61  MESETSRRVLMMQKKYISYDTLKRDMVPCTRPGVSYYECHSGPANSYDRGCEVITRCARD 120

Query: 121 VHDINT 127
           VHDINT
Sbjct: 121 VHDINT 126

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BLAST of Carg14912 vs. TAIR10
Match: AT3G23805.1 (ralf-like 24)

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-28
Identity = 65/115 (56.52%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 12  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLM 71
           + L L+ LQTH S     + + S+ G EID M     N  IGE   E  M SE+SRRV+M
Sbjct: 8   VYLSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRRVMM 67

Query: 72  MQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 127
           M+K+YISY+TLRRDMVPC +PG SYY C  G AN+Y+RGC VITRCARD +DI T
Sbjct: 68  MRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTNDIKT 118

[Close]

BLAST of Carg14912 vs. TAIR10
Match: AT4G13950.1 (ralf-like 31)

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 67/126 (53.17%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 1   MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE 60
           M N T   +F+IL  L+         DA   + S  G EID M   + N  IGE   E  
Sbjct: 1   MFNSTALVIFAILFLLI-------SADA-FPIPSPNG-EIDAML--IRNSIIGE--DEDL 60

Query: 61  MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           M +E+SRRVLM QK+YI Y+TLRRDMVPC +PG SYY+C  G ANSY RGC+ ITRCARD
Sbjct: 61  MPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYSRGCDTITRCARD 113

Query: 121 VHDINT 127
            +DINT
Sbjct: 121 TNDINT 113

[Close]

BLAST of Carg14912 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22)

HSP 1 Score: 83.6 bits (205), Expect = 9.7e-17
Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 48  CNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-P 107
           C   I EC+ E    E +S++SRR+L  QKKYISY  +RR+ VPCSR G SYY C  G  
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 108 ANSYDRGCEVITRCAR 120
           AN Y RGC  ITRC R
Sbjct: 105 ANPYSRGCSTITRCRR 119

[Close]

BLAST of Carg14912 vs. TAIR10
Match: AT4G15800.1 (ralf-like 33)

HSP 1 Score: 80.5 bits (197), Expect = 8.2e-16
Identity = 51/114 (44.74%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 12  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECL-----TEPEMESEVS 71
           + + +  L  HF F  A+    S  G  + + +K  CN  I EC       E EM+SE++
Sbjct: 9   VAIIIAILTVHFLFA-AVTSQSS--GDFVPIESK--CNGTIAECSLSTAEEEFEMDSEIN 68

Query: 72  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR 120
           RR+L    KYISY  LRR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Sbjct: 69  RRIL-ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Carg14912 vs. TAIR10
Match: AT1G02900.1 (rapid alkalinization factor 1)

HSP 1 Score: 77.4 bits (189), Expect = 7.0e-15
Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 48  CNQKIGECL--TEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PA 107
           C+  I EC+   E EM+SE++RR+L    KYISY +L+R+ VPCSR G SYY C  G  A
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRIL-ATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 108 NSYDRGCEVITRC 118
           N Y RGC  I RC
Sbjct: 107 NPYSRGCSKIARC 118

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BLAST of Carg14912 vs. Swiss-Prot
Match: sp|Q9LK37|RLF24_ARATH (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.6e-27
Identity = 65/115 (56.52%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 12  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLM 71
           + L L+ LQTH S     + + S+ G EID M     N  IGE   E  M SE+SRRV+M
Sbjct: 8   VYLSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRRVMM 67

Query: 72  MQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 127
           M+K+YISY+TLRRDMVPC +PG SYY C  G AN+Y+RGC VITRCARD +DI T
Sbjct: 68  MRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTNDIKT 118

[Close]

BLAST of Carg14912 vs. Swiss-Prot
Match: sp|Q2HIM9|RLF31_ARATH (Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-24
Identity = 67/126 (53.17%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 1   MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE 60
           M N T   +F+IL  L+         DA   + S  G EID M   + N  IGE   E  
Sbjct: 1   MFNSTALVIFAILFLLI-------SADA-FPIPSPNG-EIDAML--IRNSIIGE--DEDL 60

Query: 61  MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           M +E+SRRVLM QK+YI Y+TLRRDMVPC +PG SYY+C  G ANSY RGC+ ITRCARD
Sbjct: 61  MPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYSRGCDTITRCARD 113

Query: 121 VHDINT 127
            +DINT
Sbjct: 121 TNDINT 113

[Close]

BLAST of Carg14912 vs. Swiss-Prot
Match: sp|Q9MA62|RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15
Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 48  CNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-P 107
           C   I EC+ E    E +S++SRR+L  QKKYISY  +RR+ VPCSR G SYY C  G  
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 108 ANSYDRGCEVITRCAR 120
           AN Y RGC  ITRC R
Sbjct: 105 ANPYSRGCSTITRCRR 119

[Close]

BLAST of Carg14912 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 46  GVCNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG 105
           G C   IGEC+ E    E++SE +RR+L   KKYISY  L+++ VPCSR G SYY C PG
Sbjct: 39  GGCKGSIGECIAEEEEFELDSESNRRIL-ATKKYISYGALQKNSVPCSRRGASYYNCKPG 98

Query: 106 -PANSYDRGCEVITRC 118
             AN Y RGC  ITRC
Sbjct: 99  AQANPYSRGCSAITRC 113

[Close]

BLAST of Carg14912 vs. Swiss-Prot
Match: sp|Q8L9P8|RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-14
Identity = 51/114 (44.74%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 12  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECL-----TEPEMESEVS 71
           + + +  L  HF F  A+    S  G  + + +K  CN  I EC       E EM+SE++
Sbjct: 9   VAIIIAILTVHFLFA-AVTSQSS--GDFVPIESK--CNGTIAECSLSTAEEEFEMDSEIN 68

Query: 72  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR 120
           RR+L    KYISY  LRR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Sbjct: 69  RRIL-ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Carg14912 vs. TrEMBL
Match: tr|A0A1S3AWQ1|A0A1S3AWQ1_CUCME (protein RALF-like 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.5e-61
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 7   FFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVS 66
           FFLFSI+ PLVFLQTHFSFCDAILDLRS KGSE+DVMAKGVCNQKIGECLT+PEMESE+S
Sbjct: 9   FFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMDVMAKGVCNQKIGECLTDPEMESEIS 68

Query: 67  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 126
           RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT
Sbjct: 69  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 128

[Close]

BLAST of Carg14912 vs. TrEMBL
Match: tr|A0A0A0L7V8|A0A0A0L7V8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129640 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.6e-61
Identity = 114/121 (94.21%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 6   LFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEV 65
           LFFLFSI+ PLVFLQTHFSFCDAILDLRS KGSE++VMAKGVCNQKIGECLT+PEMESE+
Sbjct: 7   LFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMEVMAKGVCNQKIGECLTDPEMESEI 66

Query: 66  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN 125
           SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN
Sbjct: 67  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN 126

Query: 126 T 127
           T
Sbjct: 127 T 127

[Close]

BLAST of Carg14912 vs. TrEMBL
Match: tr|A0A1S4DSF8|A0A1S4DSF8_CUCME (protein RALF-like 31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 90/94 (95.74%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 33  RSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRP 92
           RS KGSE+DVMAKGVCNQKIGECLT+PEMESE+SRRVLMMQKKYISYDTLRRDMVPCSRP
Sbjct: 24  RSFKGSEMDVMAKGVCNQKIGECLTDPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRP 83

Query: 93  GVSYYECHPGPANSYDRGCEVITRCARDVHDINT 127
           GVSYYECHPGPANSYDRGCEVITRCARDVHDINT
Sbjct: 84  GVSYYECHPGPANSYDRGCEVITRCARDVHDINT 117

[Close]

BLAST of Carg14912 vs. TrEMBL
Match: tr|M5XU33|M5XU33_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G165400 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-36
Identity = 85/129 (65.89%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 2   PNPTLFFLFSILLPLVFLQTHFSFCDAI--LDLRSLKGSEIDVM--AKGVCNQKIGECLT 61
           PNP L    S+LL    + THFS C+ +   DL SLKGS ID M  A   CNQKIGECLT
Sbjct: 7   PNPMLISCLSLLL----IHTHFSICNGVSAFDLNSLKGSGIDGMVGAGRACNQKIGECLT 66

Query: 62  EPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRC 121
           EPEMESE+SRRVL MQKKYISY+TLRRD+VPC +PG SYY CH   AN Y RGCEVITRC
Sbjct: 67  EPEMESEISRRVLAMQKKYISYETLRRDLVPCGKPGASYYNCHAVAANPYSRGCEVITRC 126

Query: 122 ARDVHDINT 127
           AR  +DI T
Sbjct: 127 ARG-NDIKT 130

[Close]

BLAST of Carg14912 vs. TrEMBL
Match: tr|A0A251LAM0|A0A251LAM0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G143800 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.1e-34
Identity = 73/119 (61.34%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 1   MPNPTLFFLFSILLPLVFLQTHFSFCD--AILDLRSLKGSEIDVMAKGVCNQKIGECLTE 60
           M  PT +     LL L  L TH  FCD  ++  L S + SEID M +  C +KIG+CL E
Sbjct: 31  MSKPTFY-----LLALFLLYTHLKFCDGVSVSGLNSFEKSEIDAMVRRGCTKKIGDCLEE 90

Query: 61  PEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRC 118
           PEMESE+S+RVLMMQKKYISY+TL+RDMVPC++PG SYY+CH G AN Y RGCEVITRC
Sbjct: 91  PEMESEISKRVLMMQKKYISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEVITRC 144

The following BLAST results are available for this feature:

BLAST of Carg14912 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526933.1	6.4e-67	100.00	protein RALF-like 24 [Cucurbita pepo subsp. pepo]	[more]
XP_008438316.1	5.3e-61	95.00	PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo] >XP_008438319.1 PREDIC...	[more]
XP_011650863.1	6.9e-61	94.21	PREDICTED: protein RALF-like 24 [Cucumis sativus] >XP_011650864.1 PREDICTED: pro...	[more]
XP_022974738.1	6.9e-61	88.89	protein RALF-like 24 [Cucurbita maxima]	[more]
XP_022146989.1	2.7e-57	87.30	protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146990.1 protein RA...	[more]

BLAST of Carg14912 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23805.1	4.2e-28	56.52	ralf-like 24	[more]
AT4G13950.1	1.5e-25	53.17	ralf-like 31	[more]
AT3G05490.1	9.7e-17	55.26	ralf-like 22	[more]
AT4G15800.1	8.2e-16	44.74	ralf-like 33	[more]
AT1G02900.1	7.0e-15	53.42	rapid alkalinization factor 1	[more]

BLAST of Carg14912 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LK37\|RLF24_ARATH	7.6e-27	56.52	Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1	[more]
sp\|Q2HIM9\|RLF31_ARATH	2.7e-24	53.17	Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1	[more]
sp\|Q9MA62\|RLF22_ARATH	1.8e-15	55.26	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
sp\|Q945T0\|RALF_TOBAC	2.3e-15	55.26	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
sp\|Q8L9P8\|RLF33_ARATH	1.5e-14	44.74	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]

BLAST of Carg14912 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AWQ1\|A0A1S3AWQ1_CUCME	3.5e-61	95.00	protein RALF-like 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=4 SV=...	[more]
tr\|A0A0A0L7V8\|A0A0A0L7V8_CUCSA	4.6e-61	94.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129640 PE=4 SV=1	[more]
tr\|A0A1S4DSF8\|A0A1S4DSF8_CUCME	1.7e-47	95.74	protein RALF-like 31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=4 SV=...	[more]
tr\|M5XU33\|M5XU33_PRUPE	2.3e-36	65.89	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G165400 PE=4 SV=1	[more]
tr\|A0A251LAM0\|A0A251LAM0_MANES	8.1e-34	61.34	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G143800 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14912-RA	Carg14912-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 58..119 e-value: 3.6E-28 score: 98.1
None	No IPR available	PANTHER	PTHR33136:SF10	PROTEIN RALF-LIKE 24-RELATED	coord: 11..125
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 11..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14912	Cla021396	Watermelon (97103) v1	carwmB0617
Carg14912	Csa3G129640	Cucumber (Chinese Long) v2	carcuB0644
Carg14912	MELO3C006289	Melon (DHL92) v3.5.1	carmeB0622
Carg14912	ClCG05G003080	Watermelon (Charleston Gray)	carwcgB0602
Carg14912	CSPI03G10560	Wild cucumber (PI 183967)	carcpiB0651
Carg14912	Cucsa.256690	Cucumber (Gy14) v1	carcgyB0693
Carg14912	CmaCh06G011970	Cucurbita maxima (Rimu)	carcmaB0877
Carg14912	CmoCh06G012340	Cucurbita moschata (Rifu)	carcmoB0852
Carg14912	CmoCh14G019670	Cucurbita moschata (Rifu)	carcmoB0850
Carg14912	Lsi05G018650	Bottle gourd (USVL1VR-Ls)	carlsiB565
Carg14912	Cp4.1LG08g02630	Cucurbita pepo (Zucchini)	carcpeB0885
Carg14912	Cp4.1LG03g17800	Cucurbita pepo (Zucchini)	carcpeB0884
Carg14912	CsaV3_3G010700	Cucumber (Chinese Long) v3	carcucB0652
Carg14912	Cla97C05G083710	Watermelon (97103) v2	carwmbB0647
Carg14912	Bhi01G000140	Wax gourd	carwgoB0737

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg14912	Carg06309	Silver-seed gourd	carcarB549

The following block(s) are covering this gene:

None