ClCG05G009870 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACTTGCTTTACCAATTTGTATACGGAGAAACAAGCTAATAGAATAGAAGTACTTGTGATCTGAAACAGGGGCGGCCATGGAGAAACCCGCGGCGGCGGCGATTTTGTGCTTCTTGCTACTTTCTGCGGCGGCGGTGGCGGTTTCAGCCGACGCTGCCGACTGCATTGACGGCTGTTTCACCGCTTGTGTCCAGAAAGACAGTGAGTTTTCTTTTTTTTAACATTTCCTTTCTCTAAATTTCTTCGTATCTCACTTCTCAAATTGAGCCCTAATTCCTTTTTCCCCCTAATTTAATCGGCGTTTTAGGCATCTACGATTCTGAAATACTTGCATGGAAAATTATTGGGGTTTTCTTTTTTCTTTTTTTATAGCAATTTCTGAAGTTCCAGCAACTCATTATTGGGACAGAAAATAATTTGTTGTTTTAAAATATTTTAGTTGGTTTAAATACTATATTGTAGCCAGGTTAGCATATTCTACTAAAAATTATCATACACTATATTCCATAAATCTTTACCCCTTTTTATTTTCCTAAAATTTCTTTAGCTTTCGGATTGTTTCCTAGAAAATTTGAAAACAAAGGATTCAATAAAAACATAGTTGCATTTTATGTTTTCGGGTGTATGATTGATGGTAGATGCATAAATTTATGATTGTAAGGTTGATGAAAAAAGGATTATCACACAATGTTATAGCAATTCGAAAACCAAATTGTAAAGCATTGATAAAAATACTAAAAGACAAAACACAAGTCTTTATAACTTAATTCATTGTAATACCCTAGGTTTGGGGCAATGTGCTCAAGAAAGATAATTTCGTTAATATAAAGTAAAATAATTACAATGTTGTATTTATTTGTAAATAAATGACAATTACAGTGATCGCGAAAAACCTAACTTGGTGAATGGTTACTTAGATTTTCCCTAAATGTGAGATTTTCTCTCATAGAAGTTCAGACTCCTTCTTGATGATACTCCTACCTTTTCACCTTCCAATGAAGAACACTTCACTCACAACACTTGAGCTCCTTTAGGTGTGAGAATCTTTCTCAATGATGCGGTAGACAATTCGATAAGATCTAGAGACACATTCAAGATGAATAGTAGCCAAAGCTTCACAATCGCAAAAATTGACACGTAATCTCCTTCTTGAACACCAACACCACAAATGACTCAATACACTTTCAAAAGCGAACAACCCTAAAAGGAGAACAATACTCTCTCAAATATACACGACGGAAAAGAAGAGTCGAACCCAAACCATAGTCACAGAGCCCAGAGAAGGAAAAGATCCGTAGGAACAATTACCTATAATTTTTAAGATAAGGAAAAAATATTCAGTCAGAAATAACAATCATAGAGACATCCCTAGAACAATCGAGGGACAAATAGACAAACATCTCATGAGATAACTGTCGCAACAACTTCAAAAAGTGTAGCTAATATCAAATCTTGAGGATCTCACATTTGAAAAATTAAGAGACCACATACTTTTTATAAAATAGATGAATCATCTATTTTTCTCATTACTAATTGATTTTAAGAGGGGTTGATGGATTTTGGTTAAAAAATAAATGAATCAAAGTCTTAAAAATGTATAGATTTGAAAATGACTTGAAAAAATTGGATATGGTGCAGCGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAGTGCGGTCCAGGTATTTATTTATTTCTTTATTTATTCGAATCAACTTTTATTATTTAATTCTTCTACATTTTCTCATTTCTTTAATTAAGCATATTTACATTTTTTTCATTTTCTATTCATTTTCCCTTAATTTAATTATTGATGTGATATCAAACTTTATACTTAGGTCTCTTTTATGATTTGAATATCAATTGAAATTTATGAGAATGATAGAATATTAATGGCAGCTGCTACTTCCATTTTTACTTTTTTTTTCTTTTTTCTTTTTTTAATGAATTCTTTGATTGAATCAAATATTTCAATTTTCATATTTTGATGTAGTACTTTTTATTTATTTATTTATTTTTTTTATGATACAAGGAAAAGAAATTACGATTAAAATAGAAAAACTATAGGGAAAAACTAATTTTATAATATCGATTAATTGAGAGGACAAATTTCTTTTTTTAGTACAAGAAGAGTGGAGAATTGAACTATGATTGGAAAAATAGATAAAAGAAGATACTCTTTAAATTTTTGTTTTTTTTCTTTCTTTTTTTAGAATTCGATTACTATGAATTTAAGAGAAAAACAGTTTAAATTTTAAAAATACAAAGTTAATATTAAAATTGTTATCAAGTACAATTAGCGGTAGGAGGATTCCTAACACAGATTTGTCATTAAGTTATAGTTGGTATATGCATAATTTAATTATGCTATCTTTGCAACTAAGCATAGTTCATAAAATAACATATATTTCTTAATTAATTGACATTTTTGTCCTAATAAATTGAATTTGTTATGATCTTGTTTTAGATTCATCTTCCAAACTATATTAATGCTTAAACATCTCTTGTGTCTAATAAATATATGACATTTAGAGTATAATGAATTGATTTAATGTTTAATAAATATATGACATATAAGAGTATAATGAATTGATTTAATGTTTAGTGAGATGATAAATTTTCAATTTTGTTTTCACCACATCCATGATTTTAAGAAAAATATTGAATATGTTAATGATTCAGACACAAAATTTAAATTTAAAGATCTATAAGAAAATTTTTAAAATTCAAAGGCTGAATAGGAAAAATATATATTTTGGGTGATCTGATTTTCATCTTTTATTATTATTATTTTTTTATCTTATTGTCACTATTGTTGTCTTAAATATAGAAGTTTTATCTTTTAATTTTGAGATTTTGATTTGATCATTTTTTGAATAAAAGAGGTTAAAAATTAAATTCGTAAAGGTCAAGTTCTGTTCATTAGTCTTCAGTGTTTCGTTTTATAAACATACTTTCATTGGTTGGTTTCTTTGCTTTTTTTTTAATTATCTTTTAGAGATTTTTAAAAAAATTTCTTGCCAAGTTTTCAAAAAAGTTTGGATAGTCTAAGAAAAGAGTAGATTTTGAAAATGTATTATTGTTTTTTGAATTTAGTTATGTTTCTTAAGACGAAAACAATTGTAAATAAATTGTGAGAAAATAATTAATGATTATTAACGAAGCCTAAAAAGAAAAGAAAAAAGAGGTTCTAAATGTCAGTCTCAATATTTGGAAAGTGTCAATAAAAGGCCACATATATTTTTTTTCAAAAATTATAAATATTAAAATATCATAAAAATGTTTAAATTGATGGATAATCATACCCTTGTTAAATAAGAATAAATGTCTTGTAATTAACAAGAGGTGTAATATTTTATTGAATTCAGTGTTATATTTAGTTGGTTTTTCTTTTCTTTTTACTATTAACACTTAGGGGTTGAAGAGAGTCTTTCTATAATGTGTTCGTCAATAATATATGCTTAAATCAGTTAAGCTATTTAACCAAATTGTATAAAAATAGTCGTAACTTTGTAATGACGTAGCTTGATTCATTAGAAAAATAATACGTTTGATGTAAAAATGTGATTGCAGATAACGAAGTTGATGAAAATCTTACTCGTTGAGATAGAATAATTAAGGGCATCAATGTTGTGAGAAACTTACCTTCTTCTTCTGTCGAGGAAAAAACATTTTATGTATGCTTCGAATCAAAGCATTTTTTCTTTCTTATATTATTTTCATTGTTTGTGAAATCTAGATGTTGCATGTTATAAAAATGCTTATTTGTGTGGTTATTTATTGTTTTTGTTCCTTTACATTTGAATCAGATTTGACGATATTGCTTCGTATTGAAGGAGATCGAG AAAACTTGCTTTACCAATTTGTATACGGAGAAACAAGCTAATAGAATAGAAGTACTTGTGATCTGAAACAGGGGCGGCCATGGAGAAACCCGCGGCGGCGGCGATTTTGTGCTTCTTGCTACTTTCTGCGGCGGCGGTGGCGGTTTCAGCCGACGCTGCCGACTGCATTGACGGCTGTTTCACCGCTTGTGTCCAGAAAGACACGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAGTGCGGTCCAGATAACGAAGTTGATGAAAATCTTACTCGTTGAGATAGAATAATTAAGGGCATCAATGTTGTGAGAAACTTACCTTCTTCTTCTGTCGAGGAAAAAACATTTTATGTATGCTTCGAATCAAAGCATTTTTTCTTTCTTATATTATTTTCATTGTTTGTGAAATCTAGATGTTGCATGTTATAAAAATGCTTATTTGTGTGGTTATTTATTGTTTTTGTTCCTTTACATTTGAATCAGATTTGACGATATTGCTTCGTATTGAAGGAGATCGAG ATGGAGAAACCCGCGGCGGCGGCGATTTTGTGCTTCTTGCTACTTTCTGCGGCGGCGGTGGCGGTTTCAGCCGACGCTGCCGACTGCATTGACGGCTGTTTCACCGCTTGTGTCCAGAAAGACACGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAGTGCGGTCCAGATAACGAAGTTGATGAAAATCTTACTCGTTGA MEKPAAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLTR
BLAST of ClCG05G009870 vs. TrEMBL
Match: A0A0A0LC00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G209970 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 7.4e-20 Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 1
BLAST of ClCG05G009870 vs. TrEMBL
Match: A0A151T7U7_CAJCA (Tubby-like F-box protein OS=Cajanus cajan GN=KK1_017695 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 5.1e-13 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1
BLAST of ClCG05G009870 vs. TrEMBL
Match: W9RXP4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024166 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 8.8e-13 Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 1
BLAST of ClCG05G009870 vs. TrEMBL
Match: C6SY67_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-12 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 1
BLAST of ClCG05G009870 vs. TrEMBL
Match: W9RMA8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024163 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.4e-12 Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1
BLAST of ClCG05G009870 vs. TAIR10
Match: AT1G25275.3 (AT1G25275.3 unknown protein) HSP 1 Score: 54.3 bits (129), Expect = 3.4e-08 Identity = 25/55 (45.45%), Postives = 30/55 (54.55%), Query Frame = 1
BLAST of ClCG05G009870 vs. NCBI nr
Match: gi|659112190|ref|XP_008456107.1| (PREDICTED: uncharacterized protein LOC103496144 [Cucumis melo]) HSP 1 Score: 114.8 bits (286), Expect = 6.0e-23 Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 1
BLAST of ClCG05G009870 vs. NCBI nr
Match: gi|700202418|gb|KGN57551.1| (hypothetical protein Csa_3G209970 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-19 Identity = 50/64 (78.12%), Postives = 54/64 (84.38%), Query Frame = 1
BLAST of ClCG05G009870 vs. NCBI nr
Match: gi|1012351941|gb|KYP63130.1| (Tubby-like F-box protein 8 [Cajanus cajan]) HSP 1 Score: 81.3 bits (199), Expect = 7.4e-13 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1
BLAST of ClCG05G009870 vs. NCBI nr
Match: gi|703127567|ref|XP_010103864.1| (hypothetical protein L484_024166 [Morus notabilis]) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-12 Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 1
BLAST of ClCG05G009870 vs. NCBI nr
Match: gi|255627691|gb|ACU14190.1| (unknown [Glycine max]) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-12 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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