ClCG01G010610 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G010610
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRNA-binding protein, putative
LocationCG_Chr01 : 16469647 .. 16474287 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTATACATTGTATAATTATATATAATTTGTTTATATTTATATGCAAATATTGCGCCCATTCCAGATGCAAATTCCTTTTCTTACACAAATATCTTCCTTCTTCTCTCTGTTTCATATATAGCCTTCATTCGTTTATTTGGTATTGCATATATTTATCTAGAACAAAAACCAAAACAGTAACTGGAACAAGGAAAGAGATAGGAAAAAAGGAGGGCCTCTCGCCCTCTCTTCTTATTATGCCTTCTCTTAGATCTTAGATTCTCGAGTTCCCAACTGGGTCGTTTTCATTTGGGTAAGTTTTTTTTCCCTTAATCTCTTCTTTTCTCTGCAAATCATTTGTTTTCTCTATCTTTTTACTTGAATAGTTTTCTGGGTTTTGAATCAAAACTCATTTCTTGGGAATTTTAGCCTTTTTCTTTGAAGGGGGTCATTTCCCTTTTTCTGCCTTTACCTTTTGAGGATTCCTTGTTTGTAGATCGATCGATTTTTTCTGATCGGTGGACGCTCCGATGCTCTGAGATCGAATCTGATTGCAATCATTTTGTATCTAACAATAAGAGCATTTTCTATTTTGATGATGATGATTTTTTGTTTTTGATGACATCTGTTTAATTTAGCTTGCATTGTGGTGTTTTTCAAATGAATGCTTCTTTTTCAATCGTTGCTTGAATTCTATTCCCCTTCTAATGTAAGCACGGATATCCATATTGTTTTTGTATAGCTTTCTGTTTTTCTTCAGCCTGGATTGATCGACTTTGTGGCTTCTTCTTCTCAAGGCGATTGGCTTAGACTTTAAGATATGCGATTGCTGTGTGGTGTATGCATTCATGTTGTTGAATGATATTGATGGGATTAGTTGGAATGGATTTGTAGAGTGGGCATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTACTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACTACCGGCCGTGCCCGTGGCTTTGGTTTTGTTGTCTTTGCTGACCCTGTTGTTGCGGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTGTAAGTCTTGTGTCTTCTTCTTGATTCTCATTAATATTTCCACCTGTATTCGAAGCTATAGATGTCTTTCATAGAATGTTCCAGCGGGTGTTCTTTTGATTCTGCGAATGAATATGCTCGTGGGGCAATCAAGGTTTTCCTGATGTTTTTTGGTGTTCATCATGGTTCGAACTTATTAGAATTCTTCAGCATTTGTATTCTAAATCTCTTTTACCTTGGTAAACTCATAATTATCCTTCGGAGTGTGAATGGGAAGATTAGGCTGTTCACATTTTATTAAGACAATTTCTGTTTCATGTGTAATGGAGTTCATGTTTTTGTGGAAGTATGATGCCAATGTATGTGCTTGAAATGTCAATTTTTTTTCAGAATCAATAGCTTAGATAACATGCCCTTCAAAAGGTAATATGCATGATGTCAGTAAAAGCATTTATTTGTAGAAACATTTATATATCAAATCAACACCGTGAGAGGACCTTGGTCCTTGGATAAATATGAAAATTTTCATGTAGAAAGAAATCTATCATAATATTCCTTAGTAGTCCTCAATGTGAAACCATGATTTGTGAAAATTAGGAGGTTTGTTATATTGTAGAGTTTGTCATGGACATTAGGTTTTATGTGTGATGGCCACCATTTGTATGAAAAGGATACATTTTGTTGCTTCCACACTTCTTTTGTATTGGTAATGAGAATAAATTCTACCATTTTCATGTTTTGGTGTTCATTTTCTATTTTTCAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGAAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATTGTAGATGTTGTGGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAGCTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGCCTATAATCAAGGATATAATCCAACCTCAGTTGGAGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCTCCAATCAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTACGGAACAGGTCCCAATGTTAGCTCTAACCTCAGTTATGGACGGGTAATGAGCCCCTCGTATGGTGGAAATTTAAATAGGTATGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTAATTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTTGGCAACTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGGTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGCATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCAATTTAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAGGAAAACTTCGAATATTTTCAAGTTTTTCTTTCTTTGACTGTTGTTACTTCTCTAGGGACTTTAGACACTCAAGCTTTTATCACTTTAAGCATTATAAAAACTCAAATCAAACTTGATTATTACAACCTAACTTGAACAAGATCTGATCTATAGGTTGTACCACTGTGTCTTTAGTTATAAAGATTGCATAATATGTGCCTTTTCATATTTATGCATTTTTAGGAGTTTTTCCTGGAATTTTTTAAATCTTCTTAGACAAATCAGAATATATTAACCTTGAAACCAATGTAATGTACACATGCGCTTTCCAAAGTTGTGAGAGCCTATTTAGTGAAAGAACTTTTACTTTTTAGAACAAGACTTAAGTGAAAATATATTTTCTTCCGGATAACTGTTTTGAAATTTTGTAATTTCTTAGTTTACTTTACGATGGATGATCTGTTTTCTTGAGGATTTCTAATGTTCTTTCCTCCAAAATGTTAGACTTGAAAACAATGCTTCCTGCCACATGTGATACCTTTTGATTTTTCTAGCTATCTGATCATAGTTTCTAAATGTTGTTTCAAAAACAAAAGCAGAAAATCTATCCAAAAGCAATCCCTATTCCCTAAGCTTTTCAGTGCAAGCTTGCAATGTTGACTAGTTTTTTTCTCTGTTACACAAAAGTAAGTTTGCATAGTCACCTATAGAAATAAGTGAAAAGGATCCATATTTATTGCCTACTAATTTGTGGATTAGATCCACATCTATTTCGTTGCGATGTAATTAAAATTTATGATCGTCAAAAGGACATTTGAACGTGTATGAGTTATTTGCTGAACATCGGTTGTTGTTAGGGAAGTGTCCAAATCGTGCTTAAACATACATAGGTTTAACCATTTGAAAATAGCCTGATCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTAAATGTTTGATTCAGGAATTGCTGCTTAGGAAGAAGATGATACAACAGATGTCAAAAATTATAGTAGGTGATGCGTATTTGGTAAAGCAGGTGTACTGCAAATTTTCGTATAATTTCGTCATTGTGATACACTCCCATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTGACAAACTGTCCCATAAAGAAGCAGGTTCCAGAGGGTTTTCTCTTGGTCAGGATTGAGCTTGAAAATATAGGTCTTTCTTCTTTCTTCTTCTACTTCTTTCTTTCTTTCTTGTAATTTGATTGATATGTATAATTGGATTGTGGGTAAGGTATATATGCAGAACTGTTGCATAATACGCTACTCCGAGAAACGATGTCACACGAACGAATCAACATCTTTCTTCTTTCTTTTTTTCCTCCTTTTCTTTTCGGGTTCGTTTTTCTGGGAAAGATGCTAGTACTCATCAGGTTTTCTTGTTGTTTGACCTTTTATTATTAGTCATTCTGGGTTTTTACTTCTCATCTGATTGTATGAAACTGAGGTTGATTTAGTGGTGTGATATTATCCAGCTTCCCAATTCTTCTTTGTTGTAAATTTAGCTCCTTTTTGAGCTAAACTTTTATAAGTTCAAAATCAC

mRNA sequence

CCTATACATTGTATAATTATATATAATTTGTTTATATTTATATGCAAATATTGCGCCCATTCCAGATGCAAATTCCTTTTCTTACACAAATATCTTCCTTCTTCTCTCTGTTTCATATATAGCCTTCATTCGTTTATTTGGTATTGCATATATTTATCTAGAACAAAAACCAAAACAGTAACTGGAACAAGGAAAGAGATAGGAAAAAAGGAGGGCCTCTCGCCCTCTCTTCTTATTATGCCTTCTCTTAGATCTTAGATTCTCGAGTTCCCAACTGGGTCGTTTTCATTTGGCTTTCTGTTTTTCTTCAGCCTGGATTGATCGACTTTGTGGCTTCTTCTTCTCAAGGCGATTGGCTTAGACTTTAAGATATGCGATTGCTGTGTGGTGTATGCATTCATGTTGTTGAATGATATTGATGGGATTAGTTGGAATGGATTTGTAGAGTGGGCATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTACTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACTACCGGCCGTGCCCGTGGCTTTGGTTTTGTTGTCTTTGCTGACCCTGTTGTTGCGGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTATGTCTTTCATAGAATGTTCCAGCGGGTGTTCTTTTGATTCTGCGAATGAATATGCTCGTGGGGCAATCAAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGAAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATTGTAGATGTTGTGGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAGCTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGCCTATAATCAAGGATATAATCCAACCTCAGTTGGAGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCTCCAATCAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTACGGAACAGGTCCCAATGTTAGCTCTAACCTCAGTTATGGACGGGTAATGAGCCCCTCGTATGGTGGAAATTTAAATAGGTATGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTAATTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTTGGCAACTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGGTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGCATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCAATTTAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAGGAAAACTTCGAATATTTTCAAGAATTGCTGCTTAGGAAGAAGATGATACAACAGATGTCAAAAATTATAGTAGGTGATGCGTATTTGGTAAAGCAGGTGTACTGCAAATTTTCGTATAATTTCGTCATTGTGATACACTCCCATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTGACAAACTGTCCCATAAAGAAGCAGGTTCCAGAGGGTTTTCTCTTGGTCAGGATTGAGCTTGAAAATATAGGTCTTTCTTCTTTCTTCTTCTACTTCTTTCTTTCTTTCTTGTAATTTGATTGATATGTATAATTGGATTGTGGGTAAGGTATATATGCAGAACTGTTGCATAATACGCTACTCCGAGAAACGATGTCACACGAACGAATCAACATCTTTCTTCTTTCTTTTTTTCCTCCTTTTCTTTTCGGGTTCGTTTTTCTGGGAAAGATGCTAGTACTCATCAGGTTTTCTTGTTGTTTGACCTTTTATTATTAGTCATTCTGGGTTTTTACTTCTCATCTGATTGTATGAAACTGAGGTTGATTTAGTGGTGTGATATTATCCAGCTTCCCAATTCTTCTTTGTTGTAAATTTAGCTCCTTTTTGAGCTAAACTTTTATAAGTTCAAAATCAC

Coding sequence (CDS)

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTACTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACTACCGGCCGTGCCCGTGGCTTTGGTTTTGTTGTCTTTGCTGACCCTGTTGTTGCGGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTATGTCTTTCATAGAATGTTCCAGCGGGTGTTCTTTTGATTCTGCGAATGAATATGCTCGTGGGGCAATCAAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGAAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATTGTAGATGTTGTGGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAGCTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGCCTATAATCAAGGATATAATCCAACCTCAGTTGGAGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCTCCAATCAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTACGGAACAGGTCCCAATGTTAGCTCTAACCTCAGTTATGGACGGGTAATGAGCCCCTCGTATGGTGGAAATTTAAATAGGTATGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTAATTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTTGGCAACTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGGTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGCATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCAATTTAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAGGAAAACTTCGAATATTTTCAAGAATTGCTGCTTAGGAAGAAGATGATACAACAGATGTCAAAAATTATAGTAGGTGATGCGTATTTGGTAAAGCAGGTGTACTGCAAATTTTCGTATAATTTCGTCATTGTGATACACTCCCATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTGACAAACTGTCCCATAAAGAAGCAGGTTCCAGAGGGTTTTCTCTTGGTCAGGATTGA

Protein sequence

MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGESFYFKENFEYFQELLLRKKMIQQMSKIIVGDAYLVKQVYCKFSYNFVIVIHSHLILSELICFLFDKLSHKEAGSRGFSLGQD
Homology
[Close]
BLAST of ClCG01G010610 vs. Swiss-Prot
Match: RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.1e-64
Identity = 167/471 (35.46%), Postives = 236/471 (50.11%), Query Frame = 1 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLF+GGISW+TDED+LRE+F ++GEV + ++MRD+ TGR RGFGFV+F+DP V  RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSR----NNTG 121
           + EKH ID R                        +V+ K+A+ R++Q +  R    N + 
Sbjct: 64  LQEKHSIDTR------------------------EVDVKRAMSREEQQVSGRTGNLNTSR 123

Query: 122 ILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYE 181
             G     +TKKIFVGGL  T+T+ +F++YF+ +G + DV +MYD  T RPRGFGF++++
Sbjct: 124 SSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFD 183

Query: 182 SEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQG 241
           SE++V+ VL+KTFH+L+GK VEVKRA+PK+++P      +GG     G  G Y     QG
Sbjct: 184 SEDAVDSVLHKTFHDLSGKQVEVKRALPKDANPGGGGRSMGG-----GGSGGY-----QG 243

Query: 242 YNPTSVGGYGLRSDGRF-SPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLS 301
           Y        G     RF    +VG G  S  S GYG G          YG G N +   +
Sbjct: 244 YGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAG----------YGNGSNGAGYGA 303

Query: 302 YGRVMSPSYGGNLNRYGSPNPMVYGGGS---GGNGSNLSSSVQNLWGNVGNSAGTNSSHL 361
           YG      Y G+   YG+     YG  +    G GS+   + +N W    +S   N  + 
Sbjct: 304 YG-----GYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY- 363

Query: 362 RTFPGSGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVG 421
               GSG  H+G        G+ GA+          S    +N  +G G     SG+  G
Sbjct: 364 ----GSGAAHSGY-------GVPGAAPP------TQSPSGYSNQGYGYGG---YSGSDSG 396

Query: 422 YARSIGTNVSSASLYSAPNIYDEVHGNNDEGN-----TFYGHSSWQSLPTE 460
           Y         + + Y          G+N+ G+       YG  SW+S P++
Sbjct: 424 Y--------GNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSDPSQ 396


HSP 2 Score: 78.6 bits (192), Expect = 2.6e-13
Identity = 104/393 (26.46%), Postives = 156/393 (39.69%), Query Frame = 1 

Query: 129 KIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYK 188
           K+FVGG++    E   +++F  +G +   +VM D  T RPRGFGF+ +     +++VL +
Sbjct: 7   KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66

Query: 189 TFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNPTS---VGG 248
             H ++ + V+VKRA+ +E   V  R          G + +  ++    YN T    VGG
Sbjct: 67  K-HSIDTREVDVKRAMSREEQQVSGRT---------GNLNTSRSSGGDAYNKTKKIFVGG 126

Query: 249 Y-GLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLN-PNYGTGPNVSSNLSYGRVMSP 308
                +D  F       G ++ ++  Y    N   G    ++ +   V S L   +    
Sbjct: 127 LPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH--KTFHD 186

Query: 309 SYGGNLN-RYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGV 368
             G  +  +   P     GGG    G   S   Q   GN  +  G   S+      S G 
Sbjct: 187 LSGKQVEVKRALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVG- 246

Query: 369 HTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGTNV 428
               N L S G   G  A  G+G N G+ +       GS    + +G T GY     TN+
Sbjct: 247 ----NGLPSYGSS-GYGAGYGNGSN-GAGYGAYGGYTGSA-GGYGAGATAGYG---ATNI 306

Query: 429 SSASLYS----APNIYDEVHGNNDEGNTFYG----HSSW----QSLPTELEDS-SSIGFG 488
             A   S    AP    +   ++  GN  YG    HS +     + PT+     S+ G+G
Sbjct: 307 PGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYG 366

Query: 489 LGN-AASDVISRNNAGYTVGYGVSNRQSNRGES 502
            G  + SD    N A Y V   V  R S  G +
Sbjct: 367 YGGYSGSDSGYGNQAAYGV---VGGRPSGGGSN 373

[Close]
BLAST of ClCG01G010610 vs. Swiss-Prot
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.7e-47
Identity = 136/375 (36.27%), Postives = 181/375 (48.27%), Query Frame = 1 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLEKH-VIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 121
           + + H  +D +T                        ++ K A PR  Q  +         
Sbjct: 79  LGQPHHELDSKT------------------------IDPKVAFPRRAQPKMV-------- 138

Query: 122 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 181
               TRTKKIFVGGL++     D K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+
Sbjct: 139 ----TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 198

Query: 182 SVEKVLYKTFHELNGKMVEVKRAVPKE-SSPVPNRNQLGGYPYS-------FGRVG--SY 241
            VEKV    FHE+N KMVE K+A PKE   P   R +  G PY+        G +G  ++
Sbjct: 199 VVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNF 258

Query: 242 LNAYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPN 301
           +  Y +GY P     YG +  G F     G    + ++   G  LN       +Y   PN
Sbjct: 259 VATYGRGY-PGFAPSYGYQFPG-FPAAAYGPVAAAAVAAARGSVLN-------SYSAQPN 318

Query: 302 VSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNS 361
                 +G   SP+ G N  R G           G  G+N    V +L+G     +G  +
Sbjct: 319 ------FGAPASPA-GSNPARPG-----------GFPGANSPGPVADLYGPASQDSGVGN 330

Query: 362 --SHLRTFPGSGGVH 364
             S     PGSG  H
Sbjct: 379 YISAASPQPGSGFGH 330


HSP 2 Score: 75.1 bits (183), Expect = 2.8e-12
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 1 

Query: 120 GSPGPTRTK--------KIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGF 179
           GSPG + +         K+F+GGL+   +    + YF +FG I + +VM D  T+R RGF
Sbjct: 5   GSPGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGF 64

Query: 180 GFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSP 211
           GF+T+    SV+KVL +  HEL+ K ++ K A P+ + P
Sbjct: 65  GFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103

[Close]
BLAST of ClCG01G010610 vs. Swiss-Prot
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.0e-46
Identity = 127/339 (37.46%), Postives = 168/339 (49.56%), Query Frame = 1 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLEKH-VIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 121
           + + H  +D +T                        ++ K A PR  Q  +         
Sbjct: 79  LGQPHHELDSKT------------------------IDPKVAFPRRAQPKMV-------- 138

Query: 122 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 181
               TRTKKIFVGGL++     D K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+
Sbjct: 139 ----TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 198

Query: 182 SVEKVLYKTFHELNGKMVEVKRAVPKE-SSPVPNRNQLGGYPYS-------FGRVG--SY 241
            VEKV    FHE+N KMVE K+A PKE   P   R +  G PY+        G +G  ++
Sbjct: 199 VVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNF 258

Query: 242 LNAYNQGYNPTSVGGYGLRSDG----RFSP-----VTVGRG-GLSPISPGYGIGLNLDTG 301
           +  Y +GY P     YG +  G     + P     V   RG G +P  PG   G N    
Sbjct: 259 VATYGRGY-PGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGP 318

Query: 302 LNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMV 320
           +   YG     S   +Y    SP  G     +G   P++
Sbjct: 319 VADLYGPASQDSGVGNYISAASPQPGSGFG-HGIAGPLI 319

[Close]
BLAST of ClCG01G010610 vs. Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 7.6e-42
Identity = 111/329 (33.74%), Postives = 158/329 (48.02%), Query Frame = 1 

Query: 4   GKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+TT ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILGSP 123
            + H +DGR                         ++ K   PR  Q   +R   G    P
Sbjct: 70  SRPHTLDGRN------------------------IDPKPCTPRGMQPERTRPKEGWQKGP 129

Query: 124 --GPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 183
               +++ KIFVGG+     E++ ++YF +FG + +VV++YD   QRPRGFGFIT+E E+
Sbjct: 130 RSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQ 189

Query: 184 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYP------------YSFGRVG 243
           SV++ +   FH++ GK VEVKRA P++S     +NQ  G P             + G  G
Sbjct: 190 SVDQAVNMHFHDIMGKKVEVKRAEPRDS-----KNQAPGQPGASQWGSRVAPSAANGWAG 249

Query: 244 SYLNAYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTG 303
                + QGY P  +     ++ G + P   GRG   P  P     ++   G     G  
Sbjct: 250 QPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPG-----GFP 299

Query: 304 PNVSSNLSYGRVMSPSYGGNLNRYGSPNP 318
           P       YG     S+G     YG P P
Sbjct: 310 PPQGFPQGYGAPPQFSFG-----YGPPPP 299

[Close]
BLAST of ClCG01G010610 vs. Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.7e-41
Identity = 110/324 (33.95%), Postives = 157/324 (48.46%), Query Frame = 1 

Query: 4   GKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+TT ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILGSP 123
            + H +DGR                         ++ K   PR  Q   +R   G    P
Sbjct: 70  SRPHTLDGRN------------------------IDPKPCTPRGMQPERTRPKEGWQKGP 129

Query: 124 GP--TRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 183
               +++ KIFVGG+     E++ ++YF +FG + +VV++YD   QRPRGFGFIT+E E+
Sbjct: 130 RSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQ 189

Query: 184 SVEKVLYKTFHELNGKMVEVKRAVPKESSP----VPNRNQLGGYPY---SFGRVGSYLNA 243
           SV++ +   FH++ GK VEVKRA P++S       P  +Q G       + G  G     
Sbjct: 190 SVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPT 249

Query: 244 YNQGYNPTSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSS 303
           + QGY P  +     ++ G + P   GRG   P  P     ++   G     G  P    
Sbjct: 250 WQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPG-----GFPPPQGF 299

Query: 304 NLSYGRVMSPSYGGNLNRYGSPNP 318
              YG     S+G     YG P P
Sbjct: 310 PQGYGAPPQFSFG-----YGPPPP 299

[Close]
BLAST of ClCG01G010610 vs. TrEMBL
Match: A0A0A0LTE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181500 PE=4 SV=1)

HSP 1 Score: 913.7 bits (2360), Expect = 1.2e-262
Identity = 453/499 (90.78%), Postives = 463/499 (92.79%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYP++FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           T+VGGYGLRSDGRFSPVTVGRGGLSPISPGYG+GLNL+TGLNPNYGTGPNVSSNLSYGRV
Sbjct: 241 TAVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRV 300

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSY GNLNRYGSPNPMVY GG GGNGS LSSSVQNLWGNV  SAGTNSSHLRTFPGSG
Sbjct: 301 MSPSYSGNLNRYGSPNPMVYSGG-GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGT+SLN+IGGLWGASASLGHGENAGS FNT NLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTSSLNNIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 474

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 481 NNAGYTVGYGVSNRQSNRG 474

[Close]
BLAST of ClCG01G010610 vs. TrEMBL
Match: A0A061GIB9_THECC (RNA-binding family protein isoform 5 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 4.2e-172
Identity = 313/502 (62.35%), Postives = 374/502 (74.50%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+ GKLFIGGISWDT+EDRLREYFQ+FG+VVE +IMRDR TGRARGFGFVVFADP +A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VV+EKH+IDGRT                        VEAKKAVPRDDQNIL+++N  I G
Sbjct: 63  VVMEKHMIDGRT------------------------VEAKKAVPRDDQNILNKSNVSIHG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGP RTKKIFVGGLASTVTESDFK+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE
Sbjct: 123 SPGPARTKKIFVGGLASTVTESDFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEE 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVL +TFHELNGKMVEVKRAVPKESSP P+RNQLGGY +   RV S+LN Y QGYN 
Sbjct: 183 AVDKVLQRTFHELNGKMVEVKRAVPKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNT 242

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           +SVGGYG R +GRFSPVT GR G  P+SPGYG+GLN ++ L+P+YG   N+ SNLSYGR 
Sbjct: 243 SSVGGYGFRMEGRFSPVTAGRSGFPPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRG 302

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           +  S+ GN NR+GS  P  YGGGSGGN S L+S+ +N+WGN   +  TNS+      GSG
Sbjct: 303 LYTSFNGNSNRFGS--PFGYGGGSGGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSG 362

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
             ++G +S  SIG LW +S SLG G  A S +N  NL +GSGD    SG  +GY R+  +
Sbjct: 363 SGNSGVSSFGSIGALWDSSPSLGQGGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--S 422

Query: 421 NVSSASLYSAPN-IYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVIS 480
           NV+  S + A N  YD  + N  E  +FYG S+W+S P++LE SSS GFGLG+A+SDV++
Sbjct: 423 NVAQLSTHGASNGGYDGAYANIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMT 475

Query: 481 RNNAGYTVGYGVSNRQSNRGES 502
            N+A Y  GY V+NRQ+NRG S
Sbjct: 483 NNSADYIGGYSVTNRQANRGFS 475

[Close]
BLAST of ClCG01G010610 vs. TrEMBL
Match: A0A061GHM1_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 5.5e-172
Identity = 312/500 (62.40%), Postives = 373/500 (74.60%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+ GKLFIGGISWDT+EDRLREYFQ+FG+VVE +IMRDR TGRARGFGFVVFADP +A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VV+EKH+IDGRT                        VEAKKAVPRDDQNIL+++N  I G
Sbjct: 63  VVMEKHMIDGRT------------------------VEAKKAVPRDDQNILNKSNVSIHG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGP RTKKIFVGGLASTVTESDFK+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE
Sbjct: 123 SPGPARTKKIFVGGLASTVTESDFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEE 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVL +TFHELNGKMVEVKRAVPKESSP P+RNQLGGY +   RV S+LN Y QGYN 
Sbjct: 183 AVDKVLQRTFHELNGKMVEVKRAVPKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNT 242

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           +SVGGYG R +GRFSPVT GR G  P+SPGYG+GLN ++ L+P+YG   N+ SNLSYGR 
Sbjct: 243 SSVGGYGFRMEGRFSPVTAGRSGFPPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRG 302

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           +  S+ GN NR+GS  P  YGGGSGGN S L+S+ +N+WGN   +  TNS+      GSG
Sbjct: 303 LYTSFNGNSNRFGS--PFGYGGGSGGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSG 362

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
             ++G +S  SIG LW +S SLG G  A S +N  NL +GSGD    SG  +GY R+  +
Sbjct: 363 SGNSGVSSFGSIGALWDSSPSLGQGGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--S 422

Query: 421 NVSSASLYSAPN-IYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVIS 480
           NV+  S + A N  YD  + N  E  +FYG S+W+S P++LE SSS GFGLG+A+SDV++
Sbjct: 423 NVAQLSTHGASNGGYDGAYANIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMT 473

Query: 481 RNNAGYTVGYGVSNRQSNRG 500
            N+A Y  GY V+NRQ+NRG
Sbjct: 483 NNSADYIGGYSVTNRQANRG 473

[Close]
BLAST of ClCG01G010610 vs. TrEMBL
Match: A0A061GGB0_THECC (RNA-binding family protein isoform 3 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 5.5e-172
Identity = 312/500 (62.40%), Postives = 373/500 (74.60%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+ GKLFIGGISWDT+EDRLREYFQ+FG+VVE +IMRDR TGRARGFGFVVFADP +A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VV+EKH+IDGRT                        VEAKKAVPRDDQNIL+++N  I G
Sbjct: 63  VVMEKHMIDGRT------------------------VEAKKAVPRDDQNILNKSNVSIHG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGP RTKKIFVGGLASTVTESDFK+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE
Sbjct: 123 SPGPARTKKIFVGGLASTVTESDFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEE 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVL +TFHELNGKMVEVKRAVPKESSP P+RNQLGGY +   RV S+LN Y QGYN 
Sbjct: 183 AVDKVLQRTFHELNGKMVEVKRAVPKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNT 242

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           +SVGGYG R +GRFSPVT GR G  P+SPGYG+GLN ++ L+P+YG   N+ SNLSYGR 
Sbjct: 243 SSVGGYGFRMEGRFSPVTAGRSGFPPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRG 302

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           +  S+ GN NR+GS  P  YGGGSGGN S L+S+ +N+WGN   +  TNS+      GSG
Sbjct: 303 LYTSFNGNSNRFGS--PFGYGGGSGGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSG 362

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
             ++G +S  SIG LW +S SLG G  A S +N  NL +GSGD    SG  +GY R+  +
Sbjct: 363 SGNSGVSSFGSIGALWDSSPSLGQGGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--S 422

Query: 421 NVSSASLYSAPN-IYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVIS 480
           NV+  S + A N  YD  + N  E  +FYG S+W+S P++LE SSS GFGLG+A+SDV++
Sbjct: 423 NVAQLSTHGASNGGYDGAYANIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMT 473

Query: 481 RNNAGYTVGYGVSNRQSNRG 500
            N+A Y  GY V+NRQ+NRG
Sbjct: 483 NNSADYIGGYSVTNRQANRG 473

[Close]
BLAST of ClCG01G010610 vs. TrEMBL
Match: A0A067GII0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011518mg PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 5.1e-170
Identity = 306/511 (59.88%), Postives = 373/511 (72.99%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+ GKLFIGGISWDT+EDRLR+YFQ+FGEV+E +IM+DR TGRARGFGF+VFADP VA R
Sbjct: 3   MELGKLFIGGISWDTNEDRLRDYFQAFGEVLEAVIMKDRATGRARGFGFIVFADPAVAER 62

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VV++KH+IDGRT                        VEAKKAVPRDDQNI +RNN+ I G
Sbjct: 63  VVMQKHMIDGRT------------------------VEAKKAVPRDDQNIQNRNNSSIHG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGP RTKKIFVGGLASTVTESDFKKYFDQFG I DVVVMYDHNTQRPRGFGFITY+SEE
Sbjct: 123 SPGPARTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEE 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVL KTFHELNGKMVEVKRAVPKE SP P+RNQLG + Y   RV S+LN Y Q YNP
Sbjct: 183 AVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNP 242

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           +SVGGYGLR DGR+ PVT+GR G + I PGYG+GLN +  L+P++G G N+S NLSYGR 
Sbjct: 243 SSVGGYGLRIDGRYGPVTIGRSGFTTIGPGYGMGLNFEPNLSPSHGGGANLSPNLSYGRG 302

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           ++PS+GGN NRY SP    YG G+GGN S LSS  +NLWGN   +   N+++   F GSG
Sbjct: 303 LNPSFGGNSNRYSSPGS--YGAGNGGNSSVLSSPSRNLWGNGNLNYALNTANSNAFLGSG 362

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           G  +G  SL S+G LW +S   GHG  AG+ +++ NL +G+GD    SG  VGY R+  T
Sbjct: 363 GGTSGMGSLGSLGALWDSSPDPGHGGGAGAGYSSGNLSYGNGDLVVGSG-AVGYGRNSMT 422

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           +V   S  S    YD  +G+  E  +FYG S+W+   +ELE S S GFG+G  ASDV+++
Sbjct: 423 SVPPVS--STKGSYDVAYGDIYESGSFYGDSTWRPSSSELEGSGSFGFGVGPTASDVMTK 482

Query: 481 NNAGYTVGYGVSNRQSNRGESFYFKENFEYF 512
           N+AGY  GY V++RQ+NRG+ F+    + +F
Sbjct: 483 NSAGYVGGYSVTDRQANRGKIFFSIILYSFF 484

[Close]
BLAST of ClCG01G010610 vs. TAIR10
Match: AT3G07810.2 (AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 470.3 bits (1209), Expect = 1.7e-132
Identity = 280/522 (53.64%), Postives = 331/522 (63.41%), Query Frame = 1 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP VA  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTG-ILG 121
           + EKH IDGR                         VEAKKAVPRDDQN+++R+N+  I G
Sbjct: 64  ITEKHNIDGRL------------------------VEAKKAVPRDDQNMVNRSNSSSIQG 123

Query: 122 SPG-PTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESE 181
           SPG P RT+KIFVGGL S+VTESDFK YF+QFGT  DVVVMYDHNTQRPRGFGFITY+SE
Sbjct: 124 SPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSE 183

Query: 182 ESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLG-GYPYSFGRVGSYLNAYNQGY 241
           E+VEKVL KTFHELNGKMVEVKRAVPKE SP P+R+ LG GY Y   RV + LN Y QG+
Sbjct: 184 EAVEKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGF 243

Query: 242 NPTSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYG 301
           NP +VGGYGLR DGRFSPV  GR G +  S GYG+ +N D GL   +  G N + N+ YG
Sbjct: 244 NPAAVGGYGLRMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYG 303

Query: 302 RVMSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVG----NSAGTNSSHLR 361
           R MSP Y GN NR+G P     GG  GGN S  SS  +NLWGN G    N+  TNS+   
Sbjct: 304 RGMSPYYIGNTNRFG-PAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNS-N 363

Query: 362 TFPG--SGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTV 421
           T+ G  S G +T +    + G  WGA    G G NA S  N      G+G++ F  GT  
Sbjct: 364 TYMGGSSSGNNTLSGPFGNSGVNWGAP---GGGNNAVSNENVKFGYGGNGESGFGLGTGG 423

Query: 422 GYARSIGTN----VSSASLYSAPNI--YD-----EVHGNNDEGNTFYGHSSWQSLPTELE 481
             AR+ G N     SS S  SA N   YD     E +GN       Y   +W+S   E E
Sbjct: 424 YAARNPGANKAAPSSSFSSASATNNTGYDTAGLAEFYGN----GAVYSDPTWRSPTPETE 483

Query: 482 DSSSIGFGLGNA--ASDVISRNNA-GYTVGYGVSNRQSNRGE 501
             +   +G+G    +SDV +R+++ GY   Y V+ RQ NRGE
Sbjct: 484 GPAPFSYGIGGGVPSSDVSARSSSPGYVGSYSVNKRQPNRGE 492

[Close]
BLAST of ClCG01G010610 vs. TAIR10
Match: AT5G47620.4 (AT5G47620.4 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 408.7 bits (1049), Expect = 6.1e-114
Identity = 245/505 (48.51%), Postives = 304/505 (60.20%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTM-SFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGIL 120
           VVL KH+IDG+ +   I  +  C  D     +     VEAKKAVPRDD  + +++N+ + 
Sbjct: 63  VVLLKHIIDGKILVDSIVYNQLCRSDKCISLSE---VVEAKKAVPRDDHVVFNKSNSSLQ 122

Query: 121 GSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESE 180
           GSPGP+ +KKIFVGGLAS+VTE++FKKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SE
Sbjct: 123 GSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSE 182

Query: 181 ESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYN 240
           E+V+KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    +   R+ S LN Y QG++
Sbjct: 183 EAVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFS 242

Query: 241 PTSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGR 300
           P+ + GYG++ + R+SP    RGG SP   GYGI LN +     NYG+G    S+  +GR
Sbjct: 243 PSPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG----SSGGFGR 302

Query: 301 VMSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQN-LWGNVGNSAGTNSSHLR-TFP 360
             SP Y  +L R+GS   M  GG S GNGS L+++ +N LWGN G    +NS   R +F 
Sbjct: 303 PFSPGYAASLGRFGS--QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFS 362

Query: 361 GSGGVHTGTNSLNSIGGLWGASA---SLGHGENAGSQFNTANLDFGSGDASFTSGTTVGY 420
           G+ G+    +SL SIG  WG  A   S  HGE  G                      VG 
Sbjct: 363 GNSGM----SSLGSIGDNWGTVARARSSYHGERGG----------------------VGL 422

Query: 421 ARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAA 480
               G +V   S  S  +I         E ++ Y  S W SLP + E+      GLG   
Sbjct: 423 EAMRGVHVGGYS--SGSSIL--------EADSLYSDSMWLSLPAKAEE------GLGMGP 450

Query: 481 SDVISRNNAGYTVGYGVSNRQSNRG 500
            D +SR  AGY       NRQ N G
Sbjct: 483 LDFMSRGPAGYI------NRQPNGG 450

[Close]
BLAST of ClCG01G010610 vs. TAIR10
Match: AT4G26650.1 (AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 374.8 bits (961), Expect = 9.7e-104
Identity = 240/522 (45.98%), Postives = 301/522 (57.66%), Query Frame = 1 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDTDE+RL+EYF  +G++VE +IMRDRTTGRARGFGF+VFADP VA RV
Sbjct: 13  DLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERV 72

Query: 62  VLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGIL-- 121
           +++KH+IDGRT                        VEAKKAVPRDDQ +L R+ + +   
Sbjct: 73  IMDKHIIDGRT------------------------VEAKKAVPRDDQQVLKRHASPMHLI 132

Query: 122 -----GSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFI 181
                G+ G  RTKKIFVGGL S++TE++FK YFDQFGTI DVVVMYDHNTQRPRGFGFI
Sbjct: 133 SPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFI 192

Query: 182 TYESEESVEKVLYKTFHELNGKMVEVKRAVPKE-SSPVPNRNQLGGYPYSFGRV------ 241
           T++SEESV+ VL+KTFHELNGKMVEVKRAVPKE SS  PNR+ L GY  ++G V      
Sbjct: 193 TFDSEESVDMVLHKTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSA 252

Query: 242 GSYLNAYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGT 301
            SY N++  GYN  ++G     S GRFSP+  GR   S     +G+GLN +  LN N+  
Sbjct: 253 NSYFNSFPPGYNNNNLG-----SAGRFSPIGSGRNAFS----SFGLGLNQELNLNSNFD- 312

Query: 302 GPNVSSNLSYGRVMSPSY--GGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNS 361
                + L Y R+    Y    + NRY SP     G   G +  N S+  ++LWGN  +S
Sbjct: 313 ----GNTLGYSRIPGNQYFNSASPNRYNSP----IGYNRGDSAYNPSN--RDLWGNRSDS 372

Query: 362 AGTNSSHLRTFPG-SGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDA 421
           +G         PG + GV  G N      G WG S+ +      G  +   +   G    
Sbjct: 373 SG---------PGWNLGVSVGNNR-----GNWGLSSVVSDNNGYGRSYGAGS---GLSGL 432

Query: 422 SFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSW-QSLP-----T 481
           SF +G T G+  SIG       LY               G++ Y  S+W QS+P      
Sbjct: 433 SF-AGNTNGFDGSIG------ELY--------------RGSSVYSDSTWQQSMPHHQSSN 452

Query: 482 ELED-SSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 500
           EL+  S S GFG+ N  SD  +  + GY+  Y V NRQ++RG
Sbjct: 493 ELDGLSRSYGFGIDNVGSDPSANASEGYSGNYNVGNRQTHRG 452

[Close]
BLAST of ClCG01G010610 vs. TAIR10
Match: AT5G55550.3 (AT5G55550.3 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 337.0 bits (863), Expect = 2.3e-92
Identity = 231/520 (44.42%), Postives = 292/520 (56.15%), Query Frame = 1 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDTDE+RLR+YF ++G+VVE +IMRDR TGRARGFGF+VFADP V+ RV
Sbjct: 4   DLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERV 63

Query: 62  VLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGI-LG 121
           +++KH+IDGRT                        VEAKKAVPRDDQ +L R+ + I L 
Sbjct: 64  IMDKHIIDGRT------------------------VEAKKAVPRDDQQVLKRHASPIHLM 123

Query: 122 SP---GPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYE 181
           SP   G  RTKKIFVGGL S++TE +FK YFDQFGTI DVVVMYDHNTQRPRGFGFIT++
Sbjct: 124 SPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFD 183

Query: 182 SEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPN-RNQL-GGYPYSFGRVGSYLNAYN 241
           S+++V++VL+KTFHELNGK+VEVKRAVPKE SPV N R+ L  G  Y  G      N+Y 
Sbjct: 184 SDDAVDRVLHKTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYF 243

Query: 242 QGYNP-----TSVGGYGLRSDGRFSPVT-VGRGGLSPISPGYGIGLNLDTGLNPNYGTGP 301
             + P      S+G  G     RFSPV   GR  +S     +G+GLN D  LN N  +  
Sbjct: 244 NNFAPGPGFYNSLGPVG----RRFSPVIGSGRNAVS----AFGLGLNHDLSLNLN-PSCD 303

Query: 302 NVSSNLSYGRVMSPSY--GGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAG 361
             SS   Y R+ S  Y  G + NRY SP       G     S  +S+ ++LWGN  ++AG
Sbjct: 304 GTSSTFGYNRIPSNPYFNGASPNRYTSPI------GHNRTESPYNSNNRDLWGNRTDTAG 363

Query: 362 TNSSHLRTFPG-SGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASF 421
                    PG +  V  G N  N   GL  +SA        G  + T+        +  
Sbjct: 364 ---------PGWNLNVSNGNNRGN--WGLPSSSAVSNDNNGFGRNYGTS--------SGL 423

Query: 422 TSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSW--QSLPT----EL 481
           +S    G+  SIG       LY   ++Y +              S+W  Q LP+    EL
Sbjct: 424 SSSPFNGFEGSIG------ELYRGGSVYSD--------------STWQQQQLPSQSSHEL 445

Query: 482 ED-SSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 500
           ++ S + G+ + N  SD  + +   Y   Y V NRQ+NRG
Sbjct: 484 DNLSRAYGYDIDNVGSDPSANDPETYNGSYNVGNRQTNRG 445

[Close]
BLAST of ClCG01G010610 vs. TAIR10
Match: AT4G14300.1 (AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 246.5 bits (628), Expect = 4.0e-65
Identity = 167/471 (35.46%), Postives = 236/471 (50.11%), Query Frame = 1 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLF+GGISW+TDED+LRE+F ++GEV + ++MRD+ TGR RGFGFV+F+DP V  RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSR----NNTG 121
           + EKH ID R                        +V+ K+A+ R++Q +  R    N + 
Sbjct: 64  LQEKHSIDTR------------------------EVDVKRAMSREEQQVSGRTGNLNTSR 123

Query: 122 ILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYE 181
             G     +TKKIFVGGL  T+T+ +F++YF+ +G + DV +MYD  T RPRGFGF++++
Sbjct: 124 SSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFD 183

Query: 182 SEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQG 241
           SE++V+ VL+KTFH+L+GK VEVKRA+PK+++P      +GG     G  G Y     QG
Sbjct: 184 SEDAVDSVLHKTFHDLSGKQVEVKRALPKDANPGGGGRSMGG-----GGSGGY-----QG 243

Query: 242 YNPTSVGGYGLRSDGRF-SPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLS 301
           Y        G     RF    +VG G  S  S GYG G          YG G N +   +
Sbjct: 244 YGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAG----------YGNGSNGAGYGA 303

Query: 302 YGRVMSPSYGGNLNRYGSPNPMVYGGGS---GGNGSNLSSSVQNLWGNVGNSAGTNSSHL 361
           YG      Y G+   YG+     YG  +    G GS+   + +N W    +S   N  + 
Sbjct: 304 YG-----GYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY- 363

Query: 362 RTFPGSGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVG 421
               GSG  H+G        G+ GA+          S    +N  +G G     SG+  G
Sbjct: 364 ----GSGAAHSGY-------GVPGAAPP------TQSPSGYSNQGYGYGG---YSGSDSG 396

Query: 422 YARSIGTNVSSASLYSAPNIYDEVHGNNDEGN-----TFYGHSSWQSLPTE 460
           Y         + + Y          G+N+ G+       YG  SW+S P++
Sbjct: 424 Y--------GNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSDPSQ 396


HSP 2 Score: 78.6 bits (192), Expect = 1.4e-14
Identity = 104/393 (26.46%), Postives = 156/393 (39.69%), Query Frame = 1 

Query: 129 KIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYK 188
           K+FVGG++    E   +++F  +G +   +VM D  T RPRGFGF+ +     +++VL +
Sbjct: 7   KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66

Query: 189 TFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNPTS---VGG 248
             H ++ + V+VKRA+ +E   V  R          G + +  ++    YN T    VGG
Sbjct: 67  K-HSIDTREVDVKRAMSREEQQVSGRT---------GNLNTSRSSGGDAYNKTKKIFVGG 126

Query: 249 Y-GLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLN-PNYGTGPNVSSNLSYGRVMSP 308
                +D  F       G ++ ++  Y    N   G    ++ +   V S L   +    
Sbjct: 127 LPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH--KTFHD 186

Query: 309 SYGGNLN-RYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGV 368
             G  +  +   P     GGG    G   S   Q   GN  +  G   S+      S G 
Sbjct: 187 LSGKQVEVKRALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVG- 246

Query: 369 HTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGTNV 428
               N L S G   G  A  G+G N G+ +       GS    + +G T GY     TN+
Sbjct: 247 ----NGLPSYGSS-GYGAGYGNGSN-GAGYGAYGGYTGSA-GGYGAGATAGYG---ATNI 306

Query: 429 SSASLYS----APNIYDEVHGNNDEGNTFYG----HSSW----QSLPTELEDS-SSIGFG 488
             A   S    AP    +   ++  GN  YG    HS +     + PT+     S+ G+G
Sbjct: 307 PGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYG 366

Query: 489 LGN-AASDVISRNNAGYTVGYGVSNRQSNRGES 502
            G  + SD    N A Y V   V  R S  G +
Sbjct: 367 YGGYSGSDSGYGNQAAYGV---VGGRPSGGGSN 373

[Close]
BLAST of ClCG01G010610 vs. NCBI nr
Match: gi|659127261|ref|XP_008463611.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo])

HSP 1 Score: 921.8 bits (2381), Expect = 6.1e-265
Identity = 457/499 (91.58%), Postives = 464/499 (92.99%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYPY+FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRV
Sbjct: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRV 300

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYGGNLNRYGSPNPMVYGGG GGNGS LSSSVQNLWGNV NSAGTNSSHLRTFPGSG
Sbjct: 301 MSPSYGGNLNRYGSPNPMVYGGGGGGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLN+IGGLWG SASLGHGEN GS FNTANLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTNSLNNIGGLWGTSASLGHGENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 473

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 481 NNAGYTVGYGVSNRQSNRG 473

[Close]
BLAST of ClCG01G010610 vs. NCBI nr
Match: gi|449443534|ref|XP_004139532.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus])

HSP 1 Score: 913.7 bits (2360), Expect = 1.7e-262
Identity = 453/499 (90.78%), Postives = 463/499 (92.79%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYP++FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           T+VGGYGLRSDGRFSPVTVGRGGLSPISPGYG+GLNL+TGLNPNYGTGPNVSSNLSYGRV
Sbjct: 241 TAVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRV 300

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSY GNLNRYGSPNPMVY GG GGNGS LSSSVQNLWGNV  SAGTNSSHLRTFPGSG
Sbjct: 301 MSPSYSGNLNRYGSPNPMVYSGG-GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGT+SLN+IGGLWGASASLGHGENAGS FNT NLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTSSLNNIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 474

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 481 NNAGYTVGYGVSNRQSNRG 474

[Close]
BLAST of ClCG01G010610 vs. NCBI nr
Match: gi|1009166919|ref|XP_015901845.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba])

HSP 1 Score: 614.4 bits (1583), Expect = 2.1e-172
Identity = 313/499 (62.73%), Postives = 371/499 (74.35%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+PGKLFIGGISWDT+EDRLREYFQSFGEVVE +IM+DR TGRARGFGF+VFADP VA +
Sbjct: 3   MEPGKLFIGGISWDTNEDRLREYFQSFGEVVEAVIMKDRATGRARGFGFIVFADPYVAEK 62

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VV EKHVIDGRT                        VEAKKAVPRDDQN+L+RNN+ ILG
Sbjct: 63  VVTEKHVIDGRT------------------------VEAKKAVPRDDQNMLNRNNSNILG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SP P RTKKIFVGGLASTVTESDFK+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SE+
Sbjct: 123 SPSPARTKKIFVGGLASTVTESDFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSED 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVLY+TFHELNGKMVEVKRAVPKE SP PNR QLGGY Y  GRV S+LN ++QGYN 
Sbjct: 183 AVDKVLYRTFHELNGKMVEVKRAVPKELSPGPNRGQLGGYSYGVGRVTSFLNGFSQGYNS 242

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           +SVGGY      RFSPV+VGR GLS  +PGYG GLN + GL+P+YG   N SSNL+YGR 
Sbjct: 243 SSVGGY-----SRFSPVSVGRSGLSSFNPGYGTGLNFEPGLSPSYGVNANQSSNLNYGRG 302

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           +SPSY GN  +YGS     YGGG+GGN S L++  +NLWGN   +   NS++  +F GSG
Sbjct: 303 LSPSYNGNSIKYGS--AAGYGGGNGGNSSILNTVGRNLWGNGNLNYAANSTNTSSFMGSG 362

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
             +TG  S ++IG LWG+S S G G   GS F++ +L +GSGD SF S   +GY R+ G 
Sbjct: 363 SGNTGMGSFSNIGALWGSSPSSGQGGGTGSTFSSGSLTYGSGDVSFGS-AGLGYGRNSGA 422

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
            V+    Y+  + YD    +  EG +FYG S+W+S  +ELE S S G+GLGNAASDV+ +
Sbjct: 423 GVTPGLSYATNDGYDGARTDIFEGGSFYGDSTWRSSQSELEGSVSFGYGLGNAASDVMGK 469

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           N+AGY  GYGV+NRQS RG
Sbjct: 483 NSAGYVGGYGVANRQSTRG 469

[Close]
BLAST of ClCG01G010610 vs. NCBI nr
Match: gi|590626883|ref|XP_007026295.1| (RNA-binding family protein isoform 5 [Theobroma cacao])

HSP 1 Score: 612.8 bits (1579), Expect = 6.0e-172
Identity = 313/502 (62.35%), Postives = 374/502 (74.50%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+ GKLFIGGISWDT+EDRLREYFQ+FG+VVE +IMRDR TGRARGFGFVVFADP +A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VV+EKH+IDGRT                        VEAKKAVPRDDQNIL+++N  I G
Sbjct: 63  VVMEKHMIDGRT------------------------VEAKKAVPRDDQNILNKSNVSIHG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGP RTKKIFVGGLASTVTESDFK+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE
Sbjct: 123 SPGPARTKKIFVGGLASTVTESDFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEE 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVL +TFHELNGKMVEVKRAVPKESSP P+RNQLGGY +   RV S+LN Y QGYN 
Sbjct: 183 AVDKVLQRTFHELNGKMVEVKRAVPKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNT 242

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           +SVGGYG R +GRFSPVT GR G  P+SPGYG+GLN ++ L+P+YG   N+ SNLSYGR 
Sbjct: 243 SSVGGYGFRMEGRFSPVTAGRSGFPPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRG 302

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           +  S+ GN NR+GS  P  YGGGSGGN S L+S+ +N+WGN   +  TNS+      GSG
Sbjct: 303 LYTSFNGNSNRFGS--PFGYGGGSGGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSG 362

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
             ++G +S  SIG LW +S SLG G  A S +N  NL +GSGD    SG  +GY R+  +
Sbjct: 363 SGNSGVSSFGSIGALWDSSPSLGQGGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--S 422

Query: 421 NVSSASLYSAPN-IYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVIS 480
           NV+  S + A N  YD  + N  E  +FYG S+W+S P++LE SSS GFGLG+A+SDV++
Sbjct: 423 NVAQLSTHGASNGGYDGAYANIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMT 475

Query: 481 RNNAGYTVGYGVSNRQSNRGES 502
            N+A Y  GY V+NRQ+NRG S
Sbjct: 483 NNSADYIGGYSVTNRQANRGFS 475

[Close]
BLAST of ClCG01G010610 vs. NCBI nr
Match: gi|590626871|ref|XP_007026291.1| (RNA-binding family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 612.5 bits (1578), Expect = 7.9e-172
Identity = 312/500 (62.40%), Postives = 373/500 (74.60%), Query Frame = 1 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+ GKLFIGGISWDT+EDRLREYFQ+FG+VVE +IMRDR TGRARGFGFVVFADP +A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTMSFIECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VV+EKH+IDGRT                        VEAKKAVPRDDQNIL+++N  I G
Sbjct: 63  VVMEKHMIDGRT------------------------VEAKKAVPRDDQNILNKSNVSIHG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGP RTKKIFVGGLASTVTESDFK+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE
Sbjct: 123 SPGPARTKKIFVGGLASTVTESDFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEE 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVL +TFHELNGKMVEVKRAVPKESSP P+RNQLGGY +   RV S+LN Y QGYN 
Sbjct: 183 AVDKVLQRTFHELNGKMVEVKRAVPKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNT 242

Query: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           +SVGGYG R +GRFSPVT GR G  P+SPGYG+GLN ++ L+P+YG   N+ SNLSYGR 
Sbjct: 243 SSVGGYGFRMEGRFSPVTAGRSGFPPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRG 302

Query: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSNLSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           +  S+ GN NR+GS  P  YGGGSGGN S L+S+ +N+WGN   +  TNS+      GSG
Sbjct: 303 LYTSFNGNSNRFGS--PFGYGGGSGGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSG 362

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
             ++G +S  SIG LW +S SLG G  A S +N  NL +GSGD    SG  +GY R+  +
Sbjct: 363 SGNSGVSSFGSIGALWDSSPSLGQGGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--S 422

Query: 421 NVSSASLYSAPN-IYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVIS 480
           NV+  S + A N  YD  + N  E  +FYG S+W+S P++LE SSS GFGLG+A+SDV++
Sbjct: 423 NVAQLSTHGASNGGYDGAYANIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMT 473

Query: 481 RNNAGYTVGYGVSNRQSNRG 500
            N+A Y  GY V+NRQ+NRG
Sbjct: 483 NNSADYIGGYSVTNRQANRG 473

The following BLAST results are available for this feature:
BLAST of ClCG01G010610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNP1_ARATH7.1e-6435.46Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 S... [more]
MSI2H_MOUSE2.7e-4736.27RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1[more]
MSI2H_HUMAN1.0e-4637.46RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1[more]
DAZP1_MOUSE7.6e-4233.74DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2[more]
DAZP1_HUMAN1.7e-4133.95DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1[more]
BLAST of ClCG01G010610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTE8_CUCSA1.2e-26290.78Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181500 PE=4 SV=1[more]
A0A061GIB9_THECC4.2e-17262.35RNA-binding family protein isoform 5 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1[more]
A0A061GHM1_THECC5.5e-17262.40RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1[more]
A0A061GGB0_THECC5.5e-17262.40RNA-binding family protein isoform 3 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1[more]
A0A067GII0_CITSI5.1e-17059.88Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011518mg PE=4 SV=1[more]
BLAST of ClCG01G010610 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07810.21.7e-13253.64 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G47620.46.1e-11448.51 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G26650.19.7e-10445.98 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G55550.32.3e-9244.42 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G14300.14.0e-6535.46 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
BLAST of ClCG01G010610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127261|ref|XP_008463611.1|6.1e-26591.58PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo][more]
gi|449443534|ref|XP_004139532.1|1.7e-26290.78PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus][more]
gi|1009166919|ref|XP_015901845.1|2.1e-17262.73PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba][more]
gi|590626883|ref|XP_007026295.1|6.0e-17262.35RNA-binding family protein isoform 5 [Theobroma cacao][more]
gi|590626871|ref|XP_007026291.1|7.9e-17262.40RNA-binding family protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G010610.1ClCG01G010610.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 130..188
score: 1.2E-16coord: 6..68
score: 2.7
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 129..201
score: 1.8E-24coord: 5..76
score: 4.7
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 128..205
score: 17.967coord: 4..80
score: 16
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 4..73
score: 1.1E-21coord: 122..210
score: 1.7
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 124..226
score: 3.9E-27coord: 3..73
score: 6.85
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 100..110
score: 6.2E-162coord: 2..75
score: 6.2E-162coord: 127..357
score: 6.2E
NoneNo IPR availablePANTHERPTHR24012:SF433RNA RECOGNITION MOTIF-CONTAINING PROTEINcoord: 2..75
score: 6.2E-162coord: 127..357
score: 6.2E-162coord: 100..110
score: 6.2E