Csa1G181500 (gene) Cucumber (Chinese Long) v2

NameCsa1G181500
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRNA-binding protein, putative; contains IPR012677 (Nucleotide-binding, alpha-beta plait)
LocationChr1 : 11106016 .. 11110768 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAATTTTCGTACGCGCAAGACAACCAAGTCTTTCTTTTCTCTTTTCTTTCTCTCTCTCTACCTATACATATATAATTATAATTGTGTGTATATGTAATTTGTTATATATTTAGATGCAAATATTGCGCCCATTCCAGATGCAAATTCCTTTTCTTACACAAATATCTTTCTCCTTCTCTCTGTTTCATATATAGCCTTCAATCGTTTATTTGGTATTGCATATTTATCTAGAACAAAAACCAAAACAGTAACTGGAACAAGGAAAGAGATAGGAAAAAAGGAGGGCCTCTCGCCCTCTCTTCTTATTATGCCTTCTCTTAGATCTTAGATTCTAGAGTTCCCAACTGGGTCGTTTTCATTTCGGTAAGTTTCTCTTCTTTTCTCTGCAAATCATTTTCTTTCTTCAATCTTCCTACTTCATTTCTTTTCTGGGTTTTGAATCAAAACTCATTTCTTCCGAATTTTAACCTTTCTTCTTTGATGGGGTTCATTCCTTTTATGTGCTTTTAGCTTTTGAGGATTCCTTGTTTGTAGATCGATCGATTTTTCTGATCGGTGGACGCTCCGATGCTTTGAGATCGAATCTGATTTCAATCATTCTCTATCTAACAATAAGAGCATTTTCCATTTTGATGACGATTTTGTGTTTTTCTTTTTCATAACATCTGTTTAATTTAGCTCGCATTGCCGTGTTTCTTAAATGAATGTTTCTTTTTCAATCCTAGCTTCAATTCTATTCCTCTTCTAATGTAAGCAAAACTGTTCCATAGATATCTGTGTTGTTTTTGTATAGCCTTCTGTTTTTCCTCAGCTTGGATTGATCGGCTTTCTGGCTTCTTCTTCTCAAGCCGATTGGATTAGACTTTAAGATATGCGATTGCTGTGTGCCGTATGCACTCTTATTGCTGAATGATACTGATGGGATTGGTTGCAATGGATTTGTAGAGTGGGCATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTCGGGAGTACTTTCGGAACTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGGCCACTGGCCGTGCCCGTGGCTTCGGATTCGTTGTCTTTGCTGACCCTGTTGCTGCAGCGAGAGTTGTATTGGAAAAACATGTAATTGATGGAAGAACTGTAAGTCTTGTGTATTCTACTTTATTTTCATTGGTTTTTCCACCTGTATTAGAAGCTTTAGATGTCTTTCAAAGAATGTTCCAGTGTGTCTTCAGATTCAATTTTGTGGATTAAATATACTCGTGGAGGGATCAAGGTTTTCCTGATATCTTTTGGTGTTCCTCATGATCCAAACTTATTAGAATTCTTCAGCATTTATATGCTAAATCTCTTTTATCTCGATAATTCATAGTTTTCCTTCACAGCATGAAGGGGAAGATTCGGCTATTCACATTTTAATTGGGCAATTTCTGTTTCATGTGAAATGATGACCATGTTTTTGTGGAAGTATGATGCCAATGTATGTACTTGGGTTGCCTTCATATGTCCTGGGTATATGTACAAACATTTATATATCAAATCAATACTGTGAGAGGGCTTTGGTCCTTCGATAAATTTGCAAATTTTTGTGTAGAAAGAAGTCTATCTTAATCTTCCTTAGTAGTCCTCAATGTAAAATGACCTTACTTGAACAGGATTTGTTCTATAGGTTGTACATCTATATCCTTGAGTTCTTAAGTAGTCCTCAATGTGAAACAATGAGTTGTGTATATTAGGAGGCTCGTTATCTTGTTGAGTTTGTCATGGACATTAGGCTTTATGTGTGATGGCTTCCACGTGTGTTAAAAAGATACGTTTTGTTGCTTCCAGACCTTTATGTGTATTGGTAAAGAAAGTAAATTCTATCATTTCCATGTTTTGATGTTAGTTTTTTTTGTCTTCTTTTTTCTTTTGTTCAGGTTGAAGCAAAGAAGGCGGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAATAATACTGGTATTCTTGGATCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCCACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGTACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAGAGGGCTGTTCCCAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGCTGGATATCCTTTCAATTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCGCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTTGGTCGGGGTGGCCTTTCTCCAATTAGTCCTGGTTATGGAATGGGGCTAAATCTTGAAACAGGCTTGAACCCCAACTATGGGACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGAGTAATGAGCCCCTCGTACAGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATAGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCAGTACCTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAGTTCATTAAACAATATCGGAGGGCTTTGGGGTGCTTCTGCAAGTTTAGGTCATGGGGAAAATGCTGGTTCTTCATTCAATACTGTTAATCTTGACTTCGGAAACGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATACGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTTTTTTTACTTCAAAGAAAACTTTGAATATTTTAAAGTTTTTCTTTCTTTTGCTGCTGTTATTTCTGTAGAAACTTTAGACTTTCAAGATTTTATCACTTTAAACATTATAAAATCAAAAATCAAAACTAAATTATTACGACCTTACTTGAACAAGATTTGATCTGTAGGTTTTACCATAATGTCTTTTTGTTCTAAAGATTGTATATAACACATGGCTTTTTCATATTTATGCTTTTATAGGAGTTTTTCCTGGAATTTCTTACAATCTTCTTATAGAAGTCGGAATATATTTCTTATCCAAAAAAAAAAAAGAGAAGTCGGAATATATTAACCTTCGAACCAATGTAATGTACTGTGCACCTTCCAAAGTTGGGAGACCCTATTAACTAACTATTTAGTGAAAAAACTTTTACCTTTTTCTTGGGGATTTTTAATGTTCTTTCCTCCAAAATATTAGACCTGTAAACAATGCCTTCTACCACATGATACTTTTTTATTTTTCTAGCTATCTGATCATAGTTTTATAAAAGCTGTCTAAAAAAACAAAAACAGAGAATCCACACAGAATCAGTCCCTATTCCCTAAGCTTTTCAATGCAAAGTTTGCAAAGTTGACAAGTTTCGTTCTCTGTTGCACAAAAATAAGTTTGCATAGTCACCTACAGAAATAAGAGAAAAAGGAGGCACATTTATTGCCTGCTAATTTGCGAATTAGATCTGTTTCTGTTTGGTTGTGTTATAATTAAAATATATGATCTTCGGCAGAACATGTATAAGTTATTTGCTGAATATCTGTCGTAGTTTGGGAAGTGTCCAAATCTCACTTAGACAAACGTAGGTTTAACAATATAAAACTAGGCTGATCTTTTTGTTTTGTATGTAAATGTTTTGAATCAGGAATTGCTGCTTAGGAAGAAGATGATACAACAGATGTCAAAAATTATAGTAGGTGATGCGTATTTCAGTAAAGCAGGTGTACTGCAATTTTTCGTATAATTTCGTCCTTGTGATACACTCCCATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTCACAAACTGTTCCATAAAGAAGCAGGTTCCAGAGGGTTTTCTCTTGGTCAGGATTGAGCTTGAAAATATAGGTCTTTCTTCTTTCTTCTTCTTCTACTTCTACTTCTTTCTTTCCTTCCTTCTTTCTTGTAATTTGATTGATATGTATAATTGGATTGTGGGTAAGGTATATGTGCAGAACTGTTGCATAATACGCTACTCCGAGAAATGATGTCACACGAACGAATCAACATCTTTTTTCTTTTTTTCTCCTTTTCTTTTCGGGTTCGTCTTTCTGAAAAAAGATGCTAGTATTCATCAGGTTTTCTTGTTGTTTGACCTTTTATTAGTCATTCTGGGTTTTTACTTCTCATCTGATTGTATGAAACTGAGGTTGATTAGTGGTGTGATGTTGTCCAGCTTCCCAATTCTTCTTTGTTGTAAATTTAGCTCCCTTTTGAGCTAAACCAAAGTTTTTTAAGCTAAAAAATACTCTTACTTGCAATTGAAAATGTTCTTACTTGCAATTGGAAATGTTTCTTTTTTGCATCCATCCAATTGG

mRNA sequence

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTCGGGAGTACTTTCGGAACTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGGCCACTGGCCGTGCCCGTGGCTTCGGATTCGTTGTCTTTGCTGACCCTGTTGCTGCAGCGAGAGTTGTATTGGAAAAACATGTAATTGATGGAAGAACTGTTGAAGCAAAGAAGGCGGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAATAATACTGGTATTCTTGGATCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCCACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGTACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAGAGGGCTGTTCCCAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGCTGGATATCCTTTCAATTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCGCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTTGGTCGGGGTGGCCTTTCTCCAATTAGTCCTGGTTATGGAATGGGGCTAAATCTTGAAACAGGCTTGAACCCCAACTATGGGACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGAGTAATGAGCCCCTCGTACAGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATAGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCAGTACCTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAGTTCATTAAACAATATCGGAGGGCTTTGGGGTGCTTCTGCAAGTTTAGGTCATGGGGAAAATGCTGGTTCTTCATTCAATACTGTTAATCTTGACTTCGGAAACGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATACGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCTTAG

Coding sequence (CDS)

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACAGATGAAGATCGTCTTCGGGAGTACTTTCGGAACTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGGCCACTGGCCGTGCCCGTGGCTTCGGATTCGTTGTCTTTGCTGACCCTGTTGCTGCAGCGAGAGTTGTATTGGAAAAACATGTAATTGATGGAAGAACTGTTGAAGCAAAGAAGGCGGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAATAATACTGGTATTCTTGGATCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCCACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGTACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAAAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCGGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGAAAAATGGTTGAGGTTAAGAGGGCTGTTCCCAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGCTGGATATCCTTTCAATTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCGCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTTGGTCGGGGTGGCCTTTCTCCAATTAGTCCTGGTTATGGAATGGGGCTAAATCTTGAAACAGGCTTGAACCCCAACTATGGGACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGAGTAATGAGCCCCTCGTACAGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATATAGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAACGTCAGTACCTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAGTTCATTAAACAATATCGGAGGGCTTTGGGGTGCTTCTGCAAGTTTAGGTCATGGGGAAAATGCTGGTTCTTCATTCAATACTGTTAATCTTGACTTCGGAAACGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGATACGGTGTTTCTAATAGACAATCTAATAGAGGAATTGCTGCTTAG

Protein sequence

MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA*
BLAST of Csa1G181500 vs. Swiss-Prot
Match: RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.6e-67
Identity = 164/447 (36.69%), Postives = 233/447 (52.13%), Query Frame = 1

Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLF+GGISW+TDED+LRE+F N+GEV + ++MRD+ TGR RGFGFV+F+DP    RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q +  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F++YF+ +G + DV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRF-SPVTVG 241
           RA+PK+++P      + G     G  G Y     QGY        G     RF    +VG
Sbjct: 184 RALPKDANPGGGGRSMGG-----GGSGGY-----QGYGGNESSYDGRMDSNRFLQHQSVG 243

Query: 242 RGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVY 301
            G  S  S GYG G          YG G N +   +YG      Y+G+   YG+     Y
Sbjct: 244 NGLPSYGSSGYGAG----------YGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGY 303

Query: 302 SG----GGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWG 361
                 G G GS    + +N W   ++S   N  +     GSG  H+G        G+ G
Sbjct: 304 GATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY-----GSGAAHSGY-------GVPG 363

Query: 362 ASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEV 421
           A+        + S ++     +G       SG+  GY         + + Y         
Sbjct: 364 AAPP----TQSPSGYSNQGYGYGG-----YSGSDSGY--------GNQAAYGVVGGRPSG 396

Query: 422 HGNNDEGN-----TFYGHSSWQSLPTE 435
            G+N+ G+       YG  SW+S P++
Sbjct: 424 GGSNNPGSGGYMGGGYGDGSWRSDPSQ 396


HSP 2 Score: 76.3 bits (186), Expect = 1.0e-12
Identity = 105/397 (26.45%), Postives = 159/397 (40.05%), Query Frame = 1

Query: 105 KIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYK 164
           K+FVGG++    E   +++F  +G +   +VM D  T RPRGFGF+ +     +++VL +
Sbjct: 7   KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66

Query: 165 TFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTA---VGG 224
             H ++ + V+VKRA+ +E   V  R          G + +  +     YN T    VGG
Sbjct: 67  K-HSIDTREVDVKRAMSREEQQVSGRT---------GNLNTSRSSGGDAYNKTKKIFVGG 126

Query: 225 Y-GLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLN-PNYGTGPNVSS-------NLS 284
                +D  F       G ++ ++  Y    N   G    ++ +   V S       +LS
Sbjct: 127 LPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLS 186

Query: 285 YGRV-MSPSYSGNLNRYGSPNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTF 344
             +V +  +   + N  G    M   GGGG+G       Q   GN S+  G   S+   F
Sbjct: 187 GKQVEVKRALPKDANPGGGGRSM---GGGGSG-----GYQGYGGNESSYDGRMDSN--RF 246

Query: 345 PGSGGVHTGTSSLNNIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYAR 404
                V  G  S     G  G  A  G+G N G+ +      +      + +G T GY  
Sbjct: 247 LQHQSVGNGLPSY----GSSGYGAGYGNGSN-GAGYGAYG-GYTGSAGGYGAGATAGYG- 306

Query: 405 SIGTNVSSASLYS----APNIYDEVHGNNDEGNTFYG----HSSW----QSLPTELEDS- 464
              TN+  A   S    AP    +   ++  GN  YG    HS +     + PT+     
Sbjct: 307 --ATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGY 366

Query: 465 SSIGFGLGN-AASDVISRNNAGYTVGYGVSNRQSNRG 475
           S+ G+G G  + SD    N A Y V   V  R S  G
Sbjct: 367 SNQGYGYGGYSGSDSGYGNQAAYGV---VGGRPSGGG 371

BLAST of Csa1G181500 vs. Swiss-Prot
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-50
Identity = 126/324 (38.89%), Postives = 171/324 (52.78%), Query Frame = 1

Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD  T R+RGFGFV FADP +  +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLEKH-VIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + + H  +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKMV------------TRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLAGYPF-------NFGRVG--SYLNGYNQGYNPTAVGGYGLRSDGRF 241
           PKE   P   R +  G P+         G +G  +++  Y +GY P     YG +  G F
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPG-F 258

Query: 242 SPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLS--YGRVMSPSYSGNLNRY 301
                G    + ++   G G N      P    G N    ++  YG     S  GN    
Sbjct: 259 PAAAYGPVAAAAVAAARGSGSN---PARPGGFPGANSPGPVADLYGPASQDSGVGNYISA 318

Query: 302 GSPNPMVYSGGGGNGSILSSSVQN 313
            SP P    G G  G +++++  N
Sbjct: 319 ASPQPGSGFGHGIAGPLIATAFTN 325

BLAST of Csa1G181500 vs. Swiss-Prot
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.8e-50
Identity = 134/350 (38.29%), Postives = 180/350 (51.43%), Query Frame = 1

Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD  T R+RGFGFV FADP +  +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLEKH-VIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + + H  +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKMV------------TRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLAGYPF-------NFGRVG--SYLNGYNQGYNPTAVGGYGLRSDGRF 241
           PKE   P   R +  G P+         G +G  +++  Y +GY P     YG +  G F
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPG-F 258

Query: 242 SPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGS 301
                G    + ++   G  LN       +Y   PN      +G   SP+ S        
Sbjct: 259 PAAAYGPVAAAAVAAARGSVLN-------SYSAQPN------FGAPASPAGS-------- 318

Query: 302 PNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNS--SHLRTFPGSGGVH 339
            NP     GG  G+     V +L+G  S  +G  +  S     PGSG  H
Sbjct: 319 -NPA--RPGGFPGANSPGPVADLYGPASQDSGVGNYISAASPQPGSGFGH 330


HSP 2 Score: 75.1 bits (183), Expect = 2.3e-12
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 1

Query: 96  GSPGPTRTK--------KIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGF 155
           GSPG + +         K+F+GGL+   +    + YF +FG I + +VM D  T+R RGF
Sbjct: 5   GSPGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGF 64

Query: 156 GFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSP 187
           GF+T+    SV+KVL +  HEL+ K ++ K A P+ + P
Sbjct: 65  GFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQP 103

BLAST of Csa1G181500 vs. Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 2.7e-45
Identity = 110/292 (37.67%), Postives = 153/292 (52.40%), Query Frame = 1

Query: 4   GKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+ T ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTVEAKKAVPRDDQNILSRNNTGILGSP--GPTRTKKIFVGGLASTVTESDF 123
            + H +DGR ++ K   PR  Q   +R   G    P    +++ KIFVGG+     E++ 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 129

Query: 124 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 183
           ++YF +FG + +VV++YD   QRPRGFGFIT+E E+SV++ +   FH++ GK VEVKRA 
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189

Query: 184 PKESSPVPNRNQLAGYP----FNFGRVGSYLNG--------YNQGYNP--------TAVG 243
           P++S     +NQ  G P    +      S  NG        + QGY P         A+G
Sbjct: 190 PRDS-----KNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIG 249

Query: 244 GYGLRSDGRFSP----------VTVGRGGLSP---ISPGYGMGLNLETGLNP 260
           GYG    GR +P          V+   GG  P      GYG       G  P
Sbjct: 250 GYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGP 296

BLAST of Csa1G181500 vs. Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.0e-44
Identity = 109/292 (37.33%), Postives = 154/292 (52.74%), Query Frame = 1

Query: 4   GKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+ T ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGP--TRTKKIFVGGLASTVTESDF 123
            + H +DGR ++ K   PR  Q   +R   G    P    +++ KIFVGG+     E++ 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 129

Query: 124 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 183
           ++YF +FG + +VV++YD   QRPRGFGFIT+E E+SV++ +   FH++ GK VEVKRA 
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189

Query: 184 PKESSPVPNRNQLAGYP----FNFGRVGSYLNG--------YNQGYNP--------TAVG 243
           P++S     ++Q  G P    +    V +  NG        + QGY P         A+G
Sbjct: 190 PRDS-----KSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIG 249

Query: 244 GYGLRSDGRFSP----------VTVGRGGLSP---ISPGYGMGLNLETGLNP 260
           GYG    GR +P          V+   GG  P      GYG       G  P
Sbjct: 250 GYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGP 296

BLAST of Csa1G181500 vs. TrEMBL
Match: A0A0A0LTE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181500 PE=4 SV=1)

HSP 1 Score: 971.1 bits (2509), Expect = 5.0e-280
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300
           SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG
Sbjct: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300

Query: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360
           GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG
Sbjct: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360

Query: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420
           ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN
Sbjct: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420

Query: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
           TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 477

BLAST of Csa1G181500 vs. TrEMBL
Match: A0A061GHM1_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 5.1e-176
Identity = 316/479 (65.97%), Postives = 377/479 (78.71%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRGIAA
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGIAA 476

BLAST of Csa1G181500 vs. TrEMBL
Match: A0A061GGB0_THECC (RNA-binding family protein isoform 3 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 7.4e-175
Identity = 313/479 (65.34%), Postives = 376/479 (78.50%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRG+ +
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGMTS 476

BLAST of Csa1G181500 vs. TrEMBL
Match: A0A061GIB9_THECC (RNA-binding family protein isoform 5 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 9.7e-175
Identity = 313/478 (65.48%), Postives = 375/478 (78.45%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIA 477
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRG +
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGFS 475

BLAST of Csa1G181500 vs. TrEMBL
Match: A0A067GSP6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011518mg PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 2.6e-172
Identity = 303/477 (63.52%), Postives = 368/477 (77.15%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLR+YF+ FGEV+E +IM+DRATGRARGFGF+VFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLRDYFQAFGEVLEAVIMKDRATGRARGFGFIVFADPAVAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV++KH+IDGRTVEAKKAVPRDDQNI +RNN+ I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMQKHMIDGRTVEAKKAVPRDDQNIQNRNNSSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFG I DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL KTFHELNGKMVEVKRAV
Sbjct: 123 KKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKE SP P+RNQL  + +   RV S+LNGY Q YNP++VGGYGLR DGR+ PVT+GR G 
Sbjct: 183 PKELSPGPSRNQLGTHNYGLSRVSSFLNGYTQSYNPSSVGGYGLRIDGRYGPVTIGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300
           + I PGYGMGLN E  L+P++G G N+S NLSYGR ++PS+ GN NRY SP     +G G
Sbjct: 243 TTIGPGYGMGLNFEPNLSPSHGGGANLSPNLSYGRGLNPSFGGNSNRYSSPG-SYGAGNG 302

Query: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360
           GN S+LSS  +NLWGN + +   N+++   F GSGG  +G  SL ++G LW +S   GHG
Sbjct: 303 GNSSVLSSPSRNLWGNGNLNYALNTANSNAFLGSGGGTSGMGSLGSLGALWDSSPDPGHG 362

Query: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420
             AG+ +++ NL +GNGD    SG  VGY R+  T+V   S  S    YD  +G+  E  
Sbjct: 363 GGAGAGYSSGNLSYGNGDLVVGSG-AVGYGRNSMTSVPPVS--STKGSYDVAYGDIYESG 422

Query: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
           +FYG S+W+   +ELE S S GFG+G  ASDV+++N+AGY  GY V++RQ+NRGIAA
Sbjct: 423 SFYGDSTWRPSSSELEGSGSFGFGVGPTASDVMTKNSAGYVGGYSVTDRQANRGIAA 475

BLAST of Csa1G181500 vs. TAIR10
Match: AT3G07810.2 (AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 479.6 bits (1233), Expect = 2.3e-135
Identity = 273/495 (55.15%), Postives = 327/495 (66.06%), Query Frame = 1

Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLFIGGISWDT+E+RL+EYF +FGEV+E +I++DR TGRARGFGFVVFADP  A  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTG-ILGSPG-PTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R+N+  I GSPG P RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FK YF+QFGT  DVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRNQL-AGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRG 241
           VPKE SP P+R+ L AGY +   RV + LNGY QG+NP AVGGYGLR DGRFSPV  GR 
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSG 301
           G +  S GYGM +N + GL   +  G N + N+ YGR MSP Y GN NR+G         
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYEGGN 303

Query: 302 GGGNGSILSSSVQNLWGN---VSTSAGTNSSHLRTFPG--SGGVHTGTSSLNNIGGLWGA 361
           GGGN S  SS  +NLWGN   ++ +    +S+  T+ G  S G +T +    N G  WGA
Sbjct: 304 GGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVNWGA 363

Query: 362 SASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTN----VSSASLYSAPNI- 421
               G G NA S+ N      GNG++ F  GT    AR+ G N     SS S  SA N  
Sbjct: 364 P---GGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNNT 423

Query: 422 -YD-----EVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNA--ASDVISRNNA-G 475
            YD     E +GN       Y   +W+S   E E  +   +G+G    +SDV +R+++ G
Sbjct: 424 GYDTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPG 483

BLAST of Csa1G181500 vs. TAIR10
Match: AT5G47620.4 (AT5G47620.4 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 404.8 bits (1039), Expect = 7.2e-113
Identity = 239/506 (47.23%), Postives = 302/506 (59.68%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+  KLFIGGISW+T EDRLR+YF +FGEV+E +IM+DRATGRARGFGFVVFADP  A R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGR----------------------TVEAKKAVPRDDQNILSRNNTGILGSP 120
           VVL KH+IDG+                       VEAKKAVPRDD  + +++N+ + GSP
Sbjct: 63  VVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSP 122

Query: 121 GPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESV 180
           GP+ +KKIFVGGLAS+VTE++FKKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SEE+V
Sbjct: 123 GPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAV 182

Query: 181 EKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTA 240
           +KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    F   R+ S LN Y QG++P+ 
Sbjct: 183 DKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSP 242

Query: 241 VGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMS 300
           + GYG++ + R+SP    RGG SP   GYG+ LN E     NYG+G    S+  +GR  S
Sbjct: 243 ISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG----SSGGFGRPFS 302

Query: 301 PSYSGNLNRYGSPNPMVYSGGG--GNGSILSSSVQN-LWGNVSTSAGTNSSHLR-TFPGS 360
           P Y+ +L R+GS    + SGG   GNGS+L+++ +N LWGN      +NS   R +F G+
Sbjct: 303 PGYAASLGRFGS---QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGN 362

Query: 361 GGVHTGTSSLNNIGGLWGASA---SLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYAR 420
            G+    SSL +IG  WG  A   S  HGE  G     +    G     ++SG+++    
Sbjct: 363 SGM----SSLGSIGDNWGTVARARSSYHGERGGVGLEAMR---GVHVGGYSSGSSI---- 422

Query: 421 SIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASD 478
                                     E ++ Y  S W SLP + E+      GLG    D
Sbjct: 423 -------------------------LEADSLYSDSMWLSLPAKAEE------GLGMGPLD 453

BLAST of Csa1G181500 vs. TAIR10
Match: AT4G26650.1 (AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 392.5 bits (1007), Expect = 3.7e-109
Identity = 242/500 (48.40%), Postives = 299/500 (59.80%), Query Frame = 1

Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLFIGGISWDTDE+RL+EYF  +G++VE +IMRDR TGRARGFGF+VFADP  A RV
Sbjct: 13  DLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERV 72

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGIL-------GSPGPTRTKKIFVGGLAST 121
           +++KH+IDGRTVEAKKAVPRDDQ +L R+ + +        G+ G  RTKKIFVGGL S+
Sbjct: 73  IMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSS 132

Query: 122 VTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMV 181
           +TE++FK YFDQFGTI DVVVMYDHNTQRPRGFGFIT++SEESV+ VL+KTFHELNGKMV
Sbjct: 133 ITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMV 192

Query: 182 EVKRAVPKE-SSPVPNRNQLAGYPFNFGRV------GSYLNGYNQGYNPTAVGGYGLRSD 241
           EVKRAVPKE SS  PNR+ L GY  N+G V       SY N +  GYN   +G     S 
Sbjct: 193 EVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLG-----SA 252

Query: 242 GRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSY--SGNL 301
           GRFSP+  GR   S     +G+GLN E  LN N+       + L Y R+    Y  S + 
Sbjct: 253 GRFSPIGSGRNAFS----SFGLGLNQELNLNSNFD-----GNTLGYSRIPGNQYFNSASP 312

Query: 302 NRYGSPNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLN 361
           NRY SP      G     S  + S ++LWGN S S+G             G + G S  N
Sbjct: 313 NRYNSP-----IGYNRGDSAYNPSNRDLWGNRSDSSGP------------GWNLGVSVGN 372

Query: 362 NIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFT-SGTTVGYARSIGTNVSSASLYS 421
           N G  WG S+ +      G S+       G+G +  + +G T G+  SIG       LY 
Sbjct: 373 NRGN-WGLSSVVSDNNGYGRSYGA-----GSGLSGLSFAGNTNGFDGSIG------ELY- 432

Query: 422 APNIYDEVHGNNDEGNTFYGHSSW-QSLP-----TELED-SSSIGFGLGNAASDVISRNN 478
                         G++ Y  S+W QS+P      EL+  S S GFG+ N  SD  +  +
Sbjct: 433 -------------RGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 455

BLAST of Csa1G181500 vs. TAIR10
Match: AT5G55550.3 (AT5G55550.3 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 350.1 bits (897), Expect = 2.1e-96
Identity = 229/499 (45.89%), Postives = 291/499 (58.32%), Query Frame = 1

Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLFIGGISWDTDE+RLR+YF N+G+VVE +IMRDRATGRARGFGF+VFADP  + RV
Sbjct: 4   DLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGI-LGSP---GPTRTKKIFVGGLASTVTE 121
           +++KH+IDGRTVEAKKAVPRDDQ +L R+ + I L SP   G  RTKKIFVGGL S++TE
Sbjct: 64  IMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +FK YFDQFGTI DVVVMYDHNTQRPRGFGFIT++S+++V++VL+KTFHELNGK+VEVK
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVK 183

Query: 182 RAVPKESSPVPNRNQLAGYPFNFG------RVGSYLNGYNQG---YNPTAVGGYGLRSDG 241
           RAVPKE SPV N         N+G         SY N +  G   YN  ++G  G     
Sbjct: 184 RAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYN--SLGPVG----R 243

Query: 242 RFSPVT-VGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSY--SGNL 301
           RFSPV   GR  +S     +G+GLN +  LN N  +    SS   Y R+ S  Y    + 
Sbjct: 244 RFSPVIGSGRNAVS----AFGLGLNHDLSLNLN-PSCDGTSSTFGYNRIPSNPYFNGASP 303

Query: 302 NRYGSPNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLN 361
           NRY SP      G     S  +S+ ++LWGN + +AG             G +   S+ N
Sbjct: 304 NRYTSP-----IGHNRTESPYNSNNRDLWGNRTDTAGP------------GWNLNVSNGN 363

Query: 362 NIGGLWGASASLGHGENAGSSFNTVNLDFGNG---DASFTSGTTVGYARSIGTNVSSASL 421
           N G  WG  +S        S+ +  N  FG      +  +S    G+  SIG       L
Sbjct: 364 NRGN-WGLPSS--------SAVSNDNNGFGRNYGTSSGLSSSPFNGFEGSIG------EL 423

Query: 422 YSAPNIYDEVHGNNDEGNTFYGHSSW--QSLPT----ELED-SSSIGFGLGNAASDVISR 475
           Y   ++Y +              S+W  Q LP+    EL++ S + G+ + N  SD  + 
Sbjct: 424 YRGGSVYSD--------------STWQQQQLPSQSSHELDNLSRAYGYDIDNVGSDPSAN 445

BLAST of Csa1G181500 vs. TAIR10
Match: AT4G14300.1 (AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 256.5 bits (654), Expect = 3.2e-68
Identity = 164/447 (36.69%), Postives = 233/447 (52.13%), Query Frame = 1

Query: 2   DPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARV 61
           D GKLF+GGISW+TDED+LRE+F N+GEV + ++MRD+ TGR RGFGFV+F+DP    RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q +  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F++YF+ +G + DV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRF-SPVTVG 241
           RA+PK+++P      + G     G  G Y     QGY        G     RF    +VG
Sbjct: 184 RALPKDANPGGGGRSMGG-----GGSGGY-----QGYGGNESSYDGRMDSNRFLQHQSVG 243

Query: 242 RGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVY 301
            G  S  S GYG G          YG G N +   +YG      Y+G+   YG+     Y
Sbjct: 244 NGLPSYGSSGYGAG----------YGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGY 303

Query: 302 SG----GGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWG 361
                 G G GS    + +N W   ++S   N  +     GSG  H+G        G+ G
Sbjct: 304 GATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY-----GSGAAHSGY-------GVPG 363

Query: 362 ASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEV 421
           A+        + S ++     +G       SG+  GY         + + Y         
Sbjct: 364 AAPP----TQSPSGYSNQGYGYGG-----YSGSDSGY--------GNQAAYGVVGGRPSG 396

Query: 422 HGNNDEGN-----TFYGHSSWQSLPTE 435
            G+N+ G+       YG  SW+S P++
Sbjct: 424 GGSNNPGSGGYMGGGYGDGSWRSDPSQ 396


HSP 2 Score: 76.3 bits (186), Expect = 5.9e-14
Identity = 105/397 (26.45%), Postives = 159/397 (40.05%), Query Frame = 1

Query: 105 KIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYK 164
           K+FVGG++    E   +++F  +G +   +VM D  T RPRGFGF+ +     +++VL +
Sbjct: 7   KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66

Query: 165 TFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTA---VGG 224
             H ++ + V+VKRA+ +E   V  R          G + +  +     YN T    VGG
Sbjct: 67  K-HSIDTREVDVKRAMSREEQQVSGRT---------GNLNTSRSSGGDAYNKTKKIFVGG 126

Query: 225 Y-GLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLN-PNYGTGPNVSS-------NLS 284
                +D  F       G ++ ++  Y    N   G    ++ +   V S       +LS
Sbjct: 127 LPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLS 186

Query: 285 YGRV-MSPSYSGNLNRYGSPNPMVYSGGGGNGSILSSSVQNLWGNVSTSAGTNSSHLRTF 344
             +V +  +   + N  G    M   GGGG+G       Q   GN S+  G   S+   F
Sbjct: 187 GKQVEVKRALPKDANPGGGGRSM---GGGGSG-----GYQGYGGNESSYDGRMDSN--RF 246

Query: 345 PGSGGVHTGTSSLNNIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYAR 404
                V  G  S     G  G  A  G+G N G+ +      +      + +G T GY  
Sbjct: 247 LQHQSVGNGLPSY----GSSGYGAGYGNGSN-GAGYGAYG-GYTGSAGGYGAGATAGYG- 306

Query: 405 SIGTNVSSASLYS----APNIYDEVHGNNDEGNTFYG----HSSW----QSLPTELEDS- 464
              TN+  A   S    AP    +   ++  GN  YG    HS +     + PT+     
Sbjct: 307 --ATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGY 366

Query: 465 SSIGFGLGN-AASDVISRNNAGYTVGYGVSNRQSNRG 475
           S+ G+G G  + SD    N A Y V   V  R S  G
Sbjct: 367 SNQGYGYGGYSGSDSGYGNQAAYGV---VGGRPSGGG 371

BLAST of Csa1G181500 vs. NCBI nr
Match: gi|449443534|ref|XP_004139532.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus])

HSP 1 Score: 971.1 bits (2509), Expect = 7.2e-280
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300
           SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG
Sbjct: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGGG 300

Query: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360
           GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG
Sbjct: 301 GNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGHG 360

Query: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420
           ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN
Sbjct: 361 ENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGN 420

Query: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
           TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 TFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 477

BLAST of Csa1G181500 vs. NCBI nr
Match: gi|659127261|ref|XP_008463611.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo])

HSP 1 Score: 939.1 bits (2426), Expect = 3.0e-270
Identity = 462/478 (96.65%), Postives = 467/478 (97.70%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDR TGRARGFGFVVFADPVAAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSPVPNRNQLAGYP+NFGRVGSYLNGYNQGYNPT+VGGYGLRSDGRFSPVTVGRGGL
Sbjct: 181 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVY-SGG 300
           SPISPGYGMG+NL+TGLNPNYGTGP  SSNLSYGRVMSPSY GNLNRYGSPNPMVY  GG
Sbjct: 241 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGNGSILSSSVQNLWGNVS SAGTNSSHLRTFPGSGGVHTGT+SLNNIGGLWG SASLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 360

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GS FNT NLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
           NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 476

BLAST of Csa1G181500 vs. NCBI nr
Match: gi|1009166919|ref|XP_015901845.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba])

HSP 1 Score: 625.5 bits (1612), Expect = 7.4e-176
Identity = 313/478 (65.48%), Postives = 376/478 (78.66%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+PGKLFIGGISWDT+EDRLREYF++FGEVVE +IM+DRATGRARGFGF+VFADP  A +
Sbjct: 3   MEPGKLFIGGISWDTNEDRLREYFQSFGEVVEAVIMKDRATGRARGFGFIVFADPYVAEK 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV EKHVIDGRTVEAKKAVPRDDQN+L+RNN+ ILGSP P RTKKIFVGGLASTVTESDF
Sbjct: 63  VVTEKHVIDGRTVEAKKAVPRDDQNMLNRNNSNILGSPSPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SE++V+KVLY+TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLYRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKE SP PNR QL GY +  GRV S+LNG++QGYN ++VGGY      RFSPV+VGR GL
Sbjct: 183 PKELSPGPNRGQLGGYSYGVGRVTSFLNGFSQGYNSSSVGGY-----SRFSPVSVGRSGL 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
           S  +PGYG GLN E GL+P+YG   N SSNL+YGR +SPSY+GN  +YGS     Y GG 
Sbjct: 243 SSFNPGYGTGLNFEPGLSPSYGVNANQSSNLNYGRGLSPSYNGNSIKYGS--AAGYGGGN 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL++  +NLWGN + +   NS++  +F GSG  +TG  S +NIG LWG+S S G 
Sbjct: 303 GGNSSILNTVGRNLWGNGNLNYAANSTNTSSFMGSGSGNTGMGSFSNIGALWGSSPSSGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           G   GS+F++ +L +G+GD SF S   +GY R+ G  V+    Y+  + YD    +  EG
Sbjct: 363 GGGTGSTFSSGSLTYGSGDVSFGS-AGLGYGRNSGAGVTPGLSYATNDGYDGARTDIFEG 422

Query: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
            +FYG S+W+S  +ELE S S G+GLGNAASDV+ +N+AGY  GYGV+NRQS RGIAA
Sbjct: 423 GSFYGDSTWRSSQSELEGSVSFGYGLGNAASDVMGKNSAGYVGGYGVANRQSTRGIAA 472

BLAST of Csa1G181500 vs. NCBI nr
Match: gi|590626871|ref|XP_007026291.1| (RNA-binding family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 625.5 bits (1612), Expect = 7.4e-176
Identity = 316/479 (65.97%), Postives = 377/479 (78.71%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRGIAA
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGIAA 476

BLAST of Csa1G181500 vs. NCBI nr
Match: gi|590626877|ref|XP_007026293.1| (RNA-binding family protein isoform 3 [Theobroma cacao])

HSP 1 Score: 621.7 bits (1602), Expect = 1.1e-174
Identity = 313/479 (65.34%), Postives = 376/479 (78.50%), Query Frame = 1

Query: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60
           M+ GKLFIGGISWDT+EDRLREYF+ FG+VVE +IMRDRATGRARGFGFVVFADP  A R
Sbjct: 3   MELGKLFIGGISWDTNEDRLREYFQAFGDVVEAVIMRDRATGRARGFGFVVFADPAIAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VV+EKH+IDGRTVEAKKAVPRDDQNIL+++N  I GSPGP RTKKIFVGGLASTVTESDF
Sbjct: 63  VVMEKHMIDGRTVEAKKAVPRDDQNILNKSNVSIHGSPGPARTKKIFVGGLASTVTESDF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K+YFDQFGTI DVVVMYDHNTQRPRGFGFITY+SEE+V+KVL +TFHELNGKMVEVKRAV
Sbjct: 123 KRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLQRTFHELNGKMVEVKRAV 182

Query: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240
           PKESSP P+RNQL GY F   RV S+LNGY QGYN ++VGGYG R +GRFSPVT GR G 
Sbjct: 183 PKESSPGPSRNQLGGYNFGLSRVNSFLNGYMQGYNTSSVGGYGFRMEGRFSPVTAGRSGF 242

Query: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVYSGG- 300
            P+SPGYGMGLN E+ L+P+YG   N+ SNLSYGR +  S++GN NR+GS  P  Y GG 
Sbjct: 243 PPLSPGYGMGLNFESNLSPSYGGSSNLGSNLSYGRGLYTSFNGNSNRFGS--PFGYGGGS 302

Query: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360
           GGN SIL+S+ +N+WGN S +  TNS+      GSG  ++G SS  +IG LW +S SLG 
Sbjct: 303 GGNSSILNSAGRNMWGNGSFNYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSSPSLGQ 362

Query: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPN-IYDEVHGNNDE 420
           G  A S++N  NL +G+GD    SG  +GY R+  +NV+  S + A N  YD  + N  E
Sbjct: 363 GGGAASAYNGGNLRYGSGDFGVGSG-GIGYGRN--SNVAQLSTHGASNGGYDGAYANIYE 422

Query: 421 GNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGIAA 478
             +FYG S+W+S P++LE SSS GFGLG+A+SDV++ N+A Y  GY V+NRQ+NRG+ +
Sbjct: 423 NGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRGMTS 476

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RNP1_ARATH5.6e-6736.69Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 S... [more]
MSI2H_HUMAN1.6e-5038.89RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1[more]
MSI2H_MOUSE4.8e-5038.29RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1[more]
DAZP1_MOUSE2.7e-4537.67DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2[more]
DAZP1_HUMAN1.0e-4437.33DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LTE8_CUCSA5.0e-280100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181500 PE=4 SV=1[more]
A0A061GHM1_THECC5.1e-17665.97RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1[more]
A0A061GGB0_THECC7.4e-17565.34RNA-binding family protein isoform 3 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1[more]
A0A061GIB9_THECC9.7e-17565.48RNA-binding family protein isoform 5 OS=Theobroma cacao GN=TCM_030384 PE=4 SV=1[more]
A0A067GSP6_CITSI2.6e-17263.52Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011518mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G07810.22.3e-13555.15 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G47620.47.2e-11347.23 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G26650.13.7e-10948.40 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G55550.32.1e-9645.89 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G14300.13.2e-6836.69 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
Match NameE-valueIdentityDescription
gi|449443534|ref|XP_004139532.1|7.2e-280100.00PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus][more]
gi|659127261|ref|XP_008463611.1|3.0e-27096.65PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo][more]
gi|1009166919|ref|XP_015901845.1|7.4e-17665.48PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba][more]
gi|590626871|ref|XP_007026291.1|7.4e-17665.97RNA-binding family protein isoform 1 [Theobroma cacao][more]
gi|590626877|ref|XP_007026293.1|1.1e-17465.34RNA-binding family protein isoform 3 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU089472cucumber EST collection version 3.0transcribed_cluster
CU093979cucumber EST collection version 3.0transcribed_cluster
CU106073cucumber EST collection version 3.0transcribed_cluster
CU106385cucumber EST collection version 3.0transcribed_cluster
CU106453cucumber EST collection version 3.0transcribed_cluster
CU112047cucumber EST collection version 3.0transcribed_cluster
CU170546cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G181500.1Csa1G181500.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU106385CU106385transcribed_cluster
CU093979CU093979transcribed_cluster
CU106073CU106073transcribed_cluster
CU170546CU170546transcribed_cluster
CU112047CU112047transcribed_cluster
CU089472CU089472transcribed_cluster
CU106453CU106453transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 106..164
score: 8.6E-17coord: 6..72
score: 2.2
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 105..177
score: 1.8E-24coord: 5..76
score: 3.9
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 4..80
score: 18.035coord: 104..181
score: 17
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 99..186
score: 2.6E-25coord: 4..85
score: 9.9
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 100..202
score: 8.19E-27coord: 3..99
score: 1.18
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 103..283
score: 4.4E-165coord: 400..412
score: 4.4E-165coord: 442..477
score: 4.4E-165coord: 2..86
score: 4.4E
NoneNo IPR availablePANTHERPTHR24012:SF433RNA RECOGNITION MOTIF-CONTAINING PROTEINcoord: 103..283
score: 4.4E-165coord: 400..412
score: 4.4E-165coord: 442..477
score: 4.4E-165coord: 2..86
score: 4.4E

The following gene(s) are paralogous to this gene:

None